KH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14170 AT1G14170 AT1G14170 AT2G03110 AT2G03110 AT2G03110 AT5G15270 AT5G15270 AT5G15270 |
| fragaria_vesca | FvH4_6g48190 FvH4_6g48190 FvH4_6g48190 FvH4_6g48190 FvH4_6g48190 FvH4_6g48190 FvH4_6g48190 |
| malus_domestica | MD00G1125600.v1.1 MD09G1053100.v1.1 |
| prunus_persica | Prupe.3G265600_v2.0.a1 |
| pyrus_communis | pycom111g04440 pycom17g04850 |
| rosa_chinensis | RchiOBHm_Chr2g0167651 |
| rosa_laevigata | RLG00000021744 |
| rosa_multiflora | Rmu_co8465399.1_g000001 Rmu_sc0001970.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00083350 |
| rosa_rugosa | Rorug02G0530800 Rorug02G0530800 Rorug02G0530900 Rorug02G0531000 |
| rosa_samantha | Rh2AG600000 Rh2BG610500 Rh2CG580900 Rh2DG623200 |
| rosa_wichuraiana | Rw2G049810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 935, 1673 |
| AccB1I | GGYRCC | 6 cut(s) | 253, 444, 712, 935, 1589, 1673 |
| AccBSI | CCGCTC | 1 cut(s) | 271 |
| AcsI | RAATTY | 1 cut(s) | 875 |
| AcuI | CTGAAG | 2 cut(s) | 1020, 1296 |
| AdeI | CACNNNGTG | 1 cut(s) | 451 |
| AfaI | GTAC | 7 cut(s) | 53, 143, 149, 806, 842, 937, 1675 |
| AfeI | AGCGCT | 1 cut(s) | 1582 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 373, 752, 766, 767, 785, 797 |
| AgeI | ACCGGT | 2 cut(s) | 144, 539 |
| AgsI | TTSAA | 4 cut(s) | 592, 653, 1046, 1070 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 226 |
| AjnI | CCWGG | 1 cut(s) | 1387 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 341, 373 |
| AluBI | AGCT | 6 cut(s) | 211, 604, 848, 995, 1229, 1683 |
| AluI | AGCT | 6 cut(s) | 211, 604, 848, 995, 1229, 1683 |
| Alw21I | GWGCWC | 1 cut(s) | 547 |
| Alw26I | GTCTC | 4 cut(s) | 242, 296, 816, 1210 |
| Alw44I | GTGCAC | 1 cut(s) | 543 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 998, 1683 |
| Aor51HI | AGCGCT | 1 cut(s) | 1582 |
| ApaLI | GTGCAC | 1 cut(s) | 543 |
| ApeKI | GCWGC | 6 cut(s) | 208, 261, 1073, 1173, 1578, 1680 |
| ApoI | RAATTY | 1 cut(s) | 875 |
| AseI | ATTAAT | 1 cut(s) | 1020 |
| AsiGI | ACCGGT | 2 cut(s) | 144, 539 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 31, 311, 1257 |
| Asp718I | GGTACC | 2 cut(s) | 935, 1673 |
| AspLEI | GCGC | 1 cut(s) | 1583 |
| AspS9I | GGNCC | 6 cut(s) | 364, 743, 755, 788, 1433, 1442 |
| AsuC2I | CCSGG | 3 cut(s) | 96, 258, 1612 |
| AsuHPI | GGTGA | 2 cut(s) | 388, 824 |
| AsuII | TTCGAA | 2 cut(s) | 238, 315 |
| AvaII | GGWCC | 6 cut(s) | 364, 743, 755, 788, 1433, 1442 |
| BaeGI | GKGCMC | 3 cut(s) | 158, 447, 547 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 796, 829 |
| BanI | GGYRCC | 6 cut(s) | 253, 444, 712, 935, 1589, 1673 |
| BbsI | GAAGAC | 1 cut(s) | 1053 |
| Bbv12I | GWGCWC | 1 cut(s) | 547 |
| BbvCI | CCTCAGC | 2 cut(s) | 212, 384 |
| BbvI | GCAGC | 5 cut(s) | 220, 273, 1085, 1160, 1590 |
| BccI | CCATC | 9 cut(s) | 314, 579, 688, 778, 1282, 1424, 1433, 1457, 1664 |
| BceAI | ACGGC | 1 cut(s) | 457 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1155, 1189 |
| BciT130I | CCWGG | 1 cut(s) | 1389 |
| BclI | TGATCA | 1 cut(s) | 478 |
| BcnI | CCSGG | 3 cut(s) | 96, 258, 1612 |
| BcoDI | GTCTC | 4 cut(s) | 242, 296, 816, 1210 |
| BfaI | CTAG | 1 cut(s) | 1628 |
| BfoI | RGCGCY | 1 cut(s) | 1584 |
| Bme1390I | CCNGG | 4 cut(s) | 96, 258, 1389, 1612 |
| Bme18I | GGWCC | 6 cut(s) | 364, 743, 755, 788, 1433, 1442 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 226 |
| BmgT120I | GGNCC | 6 cut(s) | 364, 743, 755, 788, 1433, 1442 |
| BmrFI | CCNGG | 4 cut(s) | 96, 258, 1389, 1612 |
| BmrI | ACTGGG | 1 cut(s) | 152 |
| BmsI | GCATC | 6 cut(s) | 115, 668, 872, 1085, 1280, 1315 |
| BmuI | ACTGGG | 1 cut(s) | 152 |
| BpiI | GAAGAC | 1 cut(s) | 1053 |
| BpmI | CTGGAG | 1 cut(s) | 1323 |
| Bpu10I | CCTNAGC | 3 cut(s) | 212, 345, 384 |
| Bpu14I | TTCGAA | 2 cut(s) | 238, 315 |
| BpuEI | CTTGAG | 2 cut(s) | 545, 1498 |
| BpuMI | CCSGG | 3 cut(s) | 96, 258, 1612 |
| Bsa29I | ATCGAT | 1 cut(s) | 123 |
| BsaBI | GATNNNNATC | 1 cut(s) | 570 |
| BsaWI | WCCGGW | 2 cut(s) | 144, 539 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 186, 216 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 373, 752, 766, 767, 785, 797 |
| Bse118I | RCCGGY | 2 cut(s) | 144, 539 |
| Bse1I | ACTGG | 3 cut(s) | 158, 830, 1400 |
| Bse8I | GATNNNNATC | 1 cut(s) | 570 |
| BseBI | CCWGG | 1 cut(s) | 1389 |
| BseCI | ATCGAT | 1 cut(s) | 123 |
| BseGI | GGATG | 4 cut(s) | 571, 863, 1330, 1468 |
| BseJI | GATNNNNATC | 1 cut(s) | 570 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 373, 752, 766, 767, 785, 797 |
| BseMII | CTCAG | 7 cut(s) | 203, 359, 375, 704, 858, 1071, 1197 |
| BseNI | ACTGG | 3 cut(s) | 158, 830, 1400 |
| BseRI | GAGGAG | 7 cut(s) | 87, 204, 207, 281, 425, 1228, 1665 |
| BseSI | GKGCMC | 3 cut(s) | 158, 447, 547 |
| BseXI | GCAGC | 5 cut(s) | 220, 273, 1085, 1160, 1590 |
| BsgI | GTGCAG | 2 cut(s) | 629, 1313 |
| BshNI | GGYRCC | 6 cut(s) | 253, 444, 712, 935, 1589, 1673 |
| BshTI | ACCGGT | 2 cut(s) | 144, 539 |
| BshVI | ATCGAT | 1 cut(s) | 123 |
| BsiHKAI | GWGCWC | 1 cut(s) | 547 |
| BsiSI | CCGG | 6 cut(s) | 96, 145, 257, 341, 540, 1611 |
| BslFI | GGGAC | 4 cut(s) | 233, 340, 635, 741 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 373, 752, 766, 767, 785, 797 |
| BsmAI | GTCTC | 4 cut(s) | 242, 296, 816, 1210 |
| BsmBI | CGTCTC | 2 cut(s) | 242, 296 |
| BsmFI | GGGAC | 4 cut(s) | 233, 340, 635, 741 |
| BsmI | GAATGC | 2 cut(s) | 1389, 1486 |
| Bsp119I | TTCGAA | 2 cut(s) | 238, 315 |
| Bsp1286I | GDGCHC | 3 cut(s) | 158, 447, 547 |
| Bsp143I | GATC | 3 cut(s) | 478, 483, 686 |
| BspCNI | CTCAG | 7 cut(s) | 204, 358, 376, 703, 857, 1070, 1198 |
| BspDI | ATCGAT | 1 cut(s) | 123 |
| BspHI | TCATGA | 1 cut(s) | 670 |
| BspT104I | TTCGAA | 2 cut(s) | 238, 315 |
| BspT107I | GGYRCC | 6 cut(s) | 253, 444, 712, 935, 1589, 1673 |
| BsrBI | CCGCTC | 1 cut(s) | 271 |
| BsrFI | RCCGGY | 2 cut(s) | 144, 539 |
| BsrI | ACTGG | 3 cut(s) | 158, 830, 1400 |
| BssAI | RCCGGY | 2 cut(s) | 144, 539 |
| BssMI | GATC | 3 cut(s) | 478, 483, 686 |
| Bst2UI | CCWGG | 1 cut(s) | 1389 |
| Bst4CI | ACNGT | 6 cut(s) | 139, 253, 290, 422, 1538, 1589 |
| BstBI | TTCGAA | 2 cut(s) | 238, 315 |
| BstC8I | GCNNGC | 3 cut(s) | 295, 579, 1501 |
| BstDEI | CTNAG | 8 cut(s) | 212, 345, 384, 690, 844, 1057, 1206, 1248 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 795 |
| BstF5I | GGATG | 4 cut(s) | 571, 863, 1330, 1468 |
| BstH2I | RGCGCY | 1 cut(s) | 1584 |
| BstHHI | GCGC | 1 cut(s) | 1583 |
| BstKTI | GATC | 3 cut(s) | 481, 486, 689 |
| BstMAI | GTCTC | 4 cut(s) | 242, 296, 816, 1210 |
| BstMBI | GATC | 3 cut(s) | 478, 483, 686 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 350, 469, 1405, 1509, 1589 |
| BstNI | CCWGG | 1 cut(s) | 1389 |
| BstSCI | CCNGG | 4 cut(s) | 94, 256, 1387, 1610 |
| BstSLI | GKGCMC | 3 cut(s) | 158, 447, 547 |
| BstV1I | GCAGC | 5 cut(s) | 220, 273, 1085, 1160, 1590 |
| BstV2I | GAAGAC | 1 cut(s) | 1053 |
| Bsu15I | ATCGAT | 1 cut(s) | 123 |
| BsuTUI | ATCGAT | 1 cut(s) | 123 |
| BtgZI | GCGATG | 1 cut(s) | 312 |
| BtsCI | GGATG | 4 cut(s) | 571, 863, 1330, 1468 |
| BtsI | GCAGTG | 2 cut(s) | 1083, 1105 |
| BtsIMutI | CAGTG | 4 cut(s) | 165, 295, 1083, 1105 |
| Cac8I | GCNNGC | 3 cut(s) | 295, 579, 1501 |
| CaiI | CAGNNNCTG | 2 cut(s) | 998, 1683 |
| CciI | TCATGA | 1 cut(s) | 670 |
| CfoI | GCGC | 1 cut(s) | 1583 |
| Cfr10I | RCCGGY | 2 cut(s) | 144, 539 |
| Cfr13I | GGNCC | 6 cut(s) | 364, 743, 755, 788, 1433, 1442 |
| ClaI | ATCGAT | 1 cut(s) | 123 |
| CseI | GACGC | 2 cut(s) | 359, 632 |
| Csp6I | GTAC | 7 cut(s) | 52, 142, 148, 805, 841, 936, 1674 |
| CspAI | ACCGGT | 2 cut(s) | 144, 539 |
| CviAII | CATG | 5 cut(s) | 368, 449, 671, 739, 1475 |
| CviQI | GTAC | 7 cut(s) | 52, 142, 148, 805, 841, 936, 1674 |
| DdeI | CTNAG | 8 cut(s) | 212, 345, 384, 690, 844, 1057, 1206, 1248 |
| DpnI | GATC | 3 cut(s) | 480, 485, 688 |
| DpnII | GATC | 3 cut(s) | 478, 483, 686 |
| DraIII | CACNNNGTG | 1 cut(s) | 451 |
| DriI | GACNNNNNGTC | 1 cut(s) | 226 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 226 |
| EciI | GGCGGA | 3 cut(s) | 84, 431, 1630 |
| Eco32I | GATATC | 1 cut(s) | 615 |
| Eco47I | GGWCC | 6 cut(s) | 364, 743, 755, 788, 1433, 1442 |
| Eco47III | AGCGCT | 1 cut(s) | 1582 |
| Eco57I | CTGAAG | 2 cut(s) | 1020, 1296 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 795 |
| EcoO109I | RGGNCCY | 2 cut(s) | 743, 788 |
| EcoRII | CCWGG | 1 cut(s) | 1387 |
| EcoRV | GATATC | 1 cut(s) | 615 |
| Esp3I | CGTCTC | 2 cut(s) | 242, 296 |
| FaeI | CATG | 5 cut(s) | 371, 452, 674, 742, 1478 |
| FaqI | GGGAC | 4 cut(s) | 233, 340, 635, 741 |
| FatI | CATG | 5 cut(s) | 367, 448, 670, 738, 1474 |
| FauI | CCCGC | 4 cut(s) | 264, 317, 431, 1151 |
| FbaI | TGATCA | 1 cut(s) | 478 |
| FokI | GGATG | 4 cut(s) | 578, 850, 1337, 1475 |
| FspBI | CTAG | 1 cut(s) | 1628 |
| GlaI | GCGC | 1 cut(s) | 1582 |
| GsuI | CTGGAG | 1 cut(s) | 1323 |
| HaeII | RGCGCY | 1 cut(s) | 1584 |
| HapII | CCGG | 6 cut(s) | 96, 145, 257, 341, 540, 1611 |
| HgaI | GACGC | 2 cut(s) | 359, 632 |
| HhaI | GCGC | 1 cut(s) | 1583 |
| Hin1II | CATG | 5 cut(s) | 371, 452, 674, 742, 1478 |
| Hin6I | GCGC | 1 cut(s) | 1581 |
| HinP1I | GCGC | 1 cut(s) | 1581 |
| HinfI | GANTC | 7 cut(s) | 235, 550, 556, 962, 1049, 1118, 1392 |
| HpaII | CCGG | 6 cut(s) | 96, 145, 257, 341, 540, 1611 |
| HphI | GGTGA | 2 cut(s) | 388, 824 |
| Hpy166II | GTNNAC | 3 cut(s) | 142, 545, 734 |
| Hpy188III | TCNNGA | 8 cut(s) | 347, 637, 671, 684, 1122, 1164, 1302, 1436 |
| Hpy8I | GTNNAC | 3 cut(s) | 142, 545, 734 |
| Hpy99I | CGWCG | 1 cut(s) | 410 |
| HpyAV | CCTTC | 5 cut(s) | 634, 677, 756, 995, 1370 |
| HpyCH4III | ACNGT | 6 cut(s) | 139, 253, 290, 422, 1538, 1589 |
| HpyCH4IV | ACGT | 1 cut(s) | 329 |
| HpyCH4V | TGCA | 8 cut(s) | 492, 545, 610, 659, 1087, 1098, 1271, 1294 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 350, 469, 1405, 1509, 1589 |
| HpyF3I | CTNAG | 8 cut(s) | 212, 345, 384, 690, 844, 1057, 1206, 1248 |
| HpySE526I | ACGT | 1 cut(s) | 329 |
| Hsp92II | CATG | 5 cut(s) | 371, 452, 674, 742, 1478 |
| HspAI | GCGC | 1 cut(s) | 1581 |
| KpnI | GGTACC | 2 cut(s) | 939, 1677 |
| Ksp22I | TGATCA | 1 cut(s) | 478 |
| Kzo9I | GATC | 3 cut(s) | 478, 483, 686 |
| LmnI | GCTCC | 8 cut(s) | 109, 174, 268, 343, 631, 781, 839, 853 |
| Lsp1109I | GCAGC | 5 cut(s) | 220, 273, 1085, 1160, 1590 |
| LweI | GCATC | 6 cut(s) | 115, 668, 872, 1085, 1280, 1315 |
| MaeI | CTAG | 1 cut(s) | 1628 |
| MaeII | ACGT | 1 cut(s) | 329 |
| MaeIII | GTNAC | 5 cut(s) | 20, 277, 828, 1201, 1342 |
| MalI | GATC | 3 cut(s) | 480, 485, 688 |
| MbiI | CCGCTC | 1 cut(s) | 271 |
| MboI | GATC | 3 cut(s) | 478, 483, 686 |
| MboII | GAAGA | 9 cut(s) | 175, 178, 329, 699, 1058, 1250, 1289, 1406, 1599 |
| MhlI | GDGCHC | 3 cut(s) | 158, 447, 547 |
| MlyI | GAGTC | 1 cut(s) | 1043 |
| MmeI | TCCRAC | 4 cut(s) | 27, 799, 923, 1181 |
| MroXI | GAANNNNTTC | 3 cut(s) | 31, 311, 1257 |
| MseI | TTAA | 7 cut(s) | 945, 978, 1016, 1020, 1320, 1352, 1665 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1479 |
| MspA1I | CMGCKG | 3 cut(s) | 63, 211, 1683 |
| MspI | CCGG | 6 cut(s) | 96, 145, 257, 341, 540, 1611 |
| MspR9I | CCNGG | 4 cut(s) | 96, 258, 1389, 1612 |
| Mva1269I | GAATGC | 2 cut(s) | 1389, 1486 |
| MvaI | CCWGG | 1 cut(s) | 1389 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 350, 469, 1405, 1509, 1589 |
| NciI | CCSGG | 3 cut(s) | 96, 258, 1612 |
| NdeII | GATC | 3 cut(s) | 478, 483, 686 |
| NlaIII | CATG | 5 cut(s) | 371, 452, 674, 742, 1478 |
| NmuCI | GTSAC | 2 cut(s) | 20, 828 |
| NspV | TTCGAA | 2 cut(s) | 238, 315 |
| PacI | TTAATTAA | 1 cut(s) | 1020 |
| PagI | TCATGA | 1 cut(s) | 670 |
| PctI | GAATGC | 2 cut(s) | 1389, 1486 |
| PdmI | GAANNNNTTC | 3 cut(s) | 31, 311, 1257 |
| PfeI | GAWTC | 6 cut(s) | 235, 550, 556, 962, 1118, 1392 |
| PflFI | GACNNNGTC | 1 cut(s) | 1476 |
| PinAI | ACCGGT | 2 cut(s) | 144, 539 |
| PleI | GAGTC | 1 cut(s) | 1043 |
| PpsI | GAGTC | 1 cut(s) | 1043 |
| PpuMI | RGGWCCY | 2 cut(s) | 743, 788 |
| PshBI | ATTAAT | 1 cut(s) | 1020 |
| Psp5II | RGGWCCY | 2 cut(s) | 743, 788 |
| Psp6I | CCWGG | 1 cut(s) | 1387 |
| PspGI | CCWGG | 1 cut(s) | 1387 |
| PspPI | GGNCC | 6 cut(s) | 364, 743, 755, 788, 1433, 1442 |
| PspPPI | RGGWCCY | 2 cut(s) | 743, 788 |
| PstNI | CAGNNNCTG | 2 cut(s) | 998, 1683 |
| PsyI | GACNNNGTC | 1 cut(s) | 1476 |
| PvuII | CAGCTG | 2 cut(s) | 211, 1683 |
| RsaI | GTAC | 7 cut(s) | 53, 143, 149, 806, 842, 937, 1675 |
| RsaNI | GTAC | 7 cut(s) | 52, 142, 148, 805, 841, 936, 1674 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1479 |
| SaqAI | TTAA | 7 cut(s) | 945, 978, 1016, 1020, 1320, 1352, 1665 |
| Sau3AI | GATC | 3 cut(s) | 478, 483, 686 |
| Sau96I | GGNCC | 6 cut(s) | 364, 743, 755, 788, 1433, 1442 |
| SchI | GAGTC | 1 cut(s) | 1043 |
| ScrFI | CCNGG | 4 cut(s) | 96, 258, 1389, 1612 |
| SduI | GDGCHC | 3 cut(s) | 158, 447, 547 |
| SfaNI | GCATC | 6 cut(s) | 115, 668, 872, 1085, 1280, 1315 |
| SfuI | TTCGAA | 2 cut(s) | 238, 315 |
| SinI | GGWCC | 6 cut(s) | 364, 743, 755, 788, 1433, 1442 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1479 |
| SmlI | CTYRAG | 2 cut(s) | 560, 1513 |
| SmoI | CTYRAG | 2 cut(s) | 560, 1513 |
| SspI | AATATT | 2 cut(s) | 910, 1234 |
| SspMI | CTAG | 1 cut(s) | 1628 |
| StyD4I | CCNGG | 4 cut(s) | 94, 256, 1387, 1610 |
| TaaI | ACNGT | 6 cut(s) | 139, 253, 290, 422, 1538, 1589 |
| TaiI | ACGT | 1 cut(s) | 332 |
| TaqI | TCGA | 5 cut(s) | 123, 238, 315, 869, 1368 |
| TatI | WGTACW | 1 cut(s) | 840 |
| TauI | GCSGC | 4 cut(s) | 66, 69, 463, 1578 |
| TfiI | GAWTC | 6 cut(s) | 235, 550, 556, 962, 1118, 1392 |
| Tru1I | TTAA | 7 cut(s) | 945, 978, 1016, 1020, 1320, 1352, 1665 |
| Tru9I | TTAA | 7 cut(s) | 945, 978, 1016, 1020, 1320, 1352, 1665 |
| TscAI | CASTG | 4 cut(s) | 165, 295, 1083, 1105 |
| TseFI | GTSAC | 2 cut(s) | 20, 828 |
| TseI | GCWGC | 6 cut(s) | 208, 261, 1073, 1173, 1578, 1680 |
| Tsp45I | GTSAC | 2 cut(s) | 20, 828 |
| TspDTI | ATGAA | 3 cut(s) | 106, 659, 873 |
| TspGWI | ACGGA | 1 cut(s) | 39 |
| TspRI | CASTG | 4 cut(s) | 165, 295, 1083, 1105 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1476 |
| VneI | GTGCAC | 1 cut(s) | 543 |
| VpaK11BI | GGWCC | 6 cut(s) | 364, 743, 755, 788, 1433, 1442 |
| VspI | ATTAAT | 1 cut(s) | 1020 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 795 |
| XapI | RAATTY | 1 cut(s) | 875 |
| XmnI | GAANNNNTTC | 3 cut(s) | 31, 311, 1257 |
| XspI | CTAG | 1 cut(s) | 1628 |