Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0003559

Physical Location & Seq

Genomic Coordinates Reverse (-)

6000229 .. 6003716

Gene Structure 3488 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00083350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGCGGGTCAGAGGAATAGTTACGGAAAGCGCTCCCATTCTCAGTCCGATTACTCCGACAACGGCGGCGGAGGCGGCGGCAAGAGAAGAAATCCCGGCGAGGAAAGAGAGCAGTTCATCATCGACGCCGAGGACACCGTTTACCGGTACTTGTGCCCGGTGAAGAAAATCGGCAGCATAATCGGAAGAGGAGGAGAGATTGTGAAGCAACTTAGGGTCGACACCAAGTCCAAGATTCGAATCGGCGAAACGGTGCCCGGTGCCGAAGAGAGAGTCGTGACCATCTACAGCGCCAGCGACGAGACCAATGGGTTTGAGGACAGTGGGAATTTCGTTGCTCCGGCGCAGGATGCTCTGTTTCGGGTTCACGATAGGGTTATTGCTGAAGATACACACGCCGAGGAGGAGATGGATGCCACTCACCATGTTACGGCGAGGCTGCTGGTGCCGTCCGACCAGATTGGTTGCATAATTGGGAAAGGAGGGCAGATAGTTCAGACCATTCGGAGCGAAACTGGTGCGCAAATTCGGATACTCAAGGATGATCACTTGCCTGCTTGTGCATTGAACTCCGATGAGCTTGTACAGGTATCTGGGGAAGCTCCACTTGTTAAGAAGGCTCTTTTTCAAATTGCATCTCGCCTTCATGATAATCCATCACGGTCTCAGCATTTGCTTACGTCTTCAGTGCCTATGTATGCTTCTGGTGGTTCACTCATGGGCCCAACTGGTGGTGGGCCTATAGTTGGGCTAGCTCCGCTGATGGGTCCTTATGGAGGAGGTTATAAAGGTGATGTTGGAGACTGGTCACGCTCCTTGTACTCGGCTCCAAGAGATGAAGGTTCTTCAAAAGAATTTTCTCTTCGCTTGATTTGTCCAACTGCAAATATTGGAGGTGTGATTGGGAAGGGTGGTGTCATCATTAATCAAATCAGACAGGAATCTGGGGCTGCTATAAAAGTCGATAGTTCACAATCTGAAGGAGATGATTGCTTAATAACTGTTACTGCAAAGGAGTTCTTCGAAGATCAATACTCGTCAGTTGTAGAAGCAGCAGTGCGTTTGCAACCCAGATGCAGCGAGAAAGTTGAAAGGGATTCAGGGATCCTCTCATTCACAACCCGCATACTTGTTCCAACCTCACGAATTGGCTGCCTTATTGGTAAAGGAGGAGCTATTGTAACTGAGATGAGGAGACTAACTAAAGCTAATATTCGCATACTTTCAAAAGAAAATCTTCCCAAAATTGCTTCTGAAGATGATGAAATGGTGCAGATTTCTGGAGACCTTGATATTGCCAAGGAAGCTCTTATACATGTTGTGACGCGATTGAGGGCAAACCTTTTCGACAGGGAAGGTGCAGTGTCTGCATTCCTTCCAACAGTTCTGCCTTATCTTCCTGTGGGAGGAGATGCGGCAGATGGTCCAAATTATGACAGTAGAGATGGTAAAAGACATGGGCGTTATGGTGGTTATGGTGGCTCAAGTGATTTTGGAGCTAGTGACAGTTATGGAAGTTATGGTGGTTCACAGGTTGGTGGCAGCGGCAGTCCCTATGGAGCTTATGGAGCTTATTCTTCTGGACGTACTGGCAGTTCTGGGTTATCTAGCCAGAACCCTGTTTCTCGGCGGAGAAACTATGGTTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

549

Amino Acids

58.48

Weight (kDa)

6.12

Isoelectric Point (pI)

45.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	48 - 97	1.3e-10	KH domain
KH_1	PF00013	144 - 212	3e-16	KH domain
KH_1	PF00013	288 - 337	1.1e-11	KH domain
KH_1	PF00013	373 - 436	8.5e-13	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003559)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14170 AT1G14170 AT1G14170 AT2G03110 AT2G03110 AT2G03110 AT5G15270 AT5G15270 AT5G15270
fragaria_vesca	FvH4_6g48190 FvH4_6g48190 FvH4_6g48190 FvH4_6g48190 FvH4_6g48190 FvH4_6g48190 FvH4_6g48190
malus_domestica	MD00G1125600.v1.1 MD09G1053100.v1.1
prunus_persica	Prupe.3G265600_v2.0.a1
pyrus_communis	pycom111g04440 pycom17g04850
rosa_chinensis	RchiOBHm_Chr2g0167651
rosa_laevigata	RLG00000021744
rosa_multiflora	Rmu_co8465399.1_g000001 Rmu_sc0001970.1_g000014
rosa_roxburghii	Rroxscaffold_2G00083350
rosa_rugosa	Rorug02G0530800 Rorug02G0530800 Rorug02G0530900 Rorug02G0531000
rosa_samantha	Rh2AG600000 Rh2BG610500 Rh2CG580900 Rh2DG623200
rosa_wichuraiana	Rw2G049810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	786
Acc16I	TGCGCA	1 cut(s)	522
AccB1I	GGYRCC	3 cut(s)	253, 260, 445
AccB7I	CCANNNNNTGG	1 cut(s)	731
AccI	GTMKAC	1 cut(s)	219
AccII	CGCG	1 cut(s)	1327
AclWI	GGATC	2 cut(s)	1099, 1112
AcsI	RAATTY	3 cut(s)	328, 525, 854
AcuI	CTGAAG	4 cut(s)	405, 669, 999, 1275
AcyI	GRCGYC	1 cut(s)	126
AfaI	GTAC	4 cut(s)	149, 585, 821, 1588
AfeI	AGCGCT	1 cut(s)	32
AfiI	CCNNNNNNNGG	7 cut(s)	144, 430, 731, 746, 764, 776, 1406
AflIII	ACRYGT	1 cut(s)	1315
AgeI	ACCGGT	1 cut(s)	144
AgsI	TTSAA	5 cut(s)	568, 629, 849, 1091, 1227
AhdI	GACNNNNNGTC	1 cut(s)	226
AluBI	AGCT	9 cut(s)	580, 602, 755, 1175, 1208, 1307, 1499, 1562, 1571
AluI	AGCT	9 cut(s)	580, 602, 755, 1175, 1208, 1307, 1499, 1562, 1571
Alw26I	GTCTC	5 cut(s)	296, 669, 795, 1189, 1278
AlwI	GGATC	2 cut(s)	1099, 1112
AlwNI	CAGNNNCTG	1 cut(s)	1367
Aor51HI	AGCGCT	1 cut(s)	32
AoxI	GGCC	2 cut(s)	721, 737
ApaI	GGGCCC	1 cut(s)	725
ApeKI	GCWGC	7 cut(s)	174, 439, 950, 1052, 1077, 1152, 1542
ApoI	RAATTY	3 cut(s)	328, 525, 854
ArsI	GACNNNNNNTTYG	2 cut(s)	258, 290
AseI	ATTAAT	1 cut(s)	924
AsiGI	ACCGGT	1 cut(s)	144
Asp700I	GAANNNNTTC	1 cut(s)	1236
AspLEI	GCGC	4 cut(s)	33, 293, 346, 523
AspS9I	GGNCC	5 cut(s)	721, 722, 737, 767, 1424
AsuC2I	CCSGG	3 cut(s)	96, 158, 258
AsuHPI	GGTGA	3 cut(s)	172, 413, 803
AsuII	TTCGAA	2 cut(s)	238, 1023
AsuNHI	GCTAGC	1 cut(s)	751
AvaII	GGWCC	2 cut(s)	767, 1424
BaeGI	GKGCMC	3 cut(s)	158, 258, 725
BamHI	GGATCC	1 cut(s)	1104
BanI	GGYRCC	3 cut(s)	253, 260, 445
BanII	GRGCYC	1 cut(s)	725
BarI	GAAGNNNNNNTAC	2 cut(s)	1296, 1328
BbsI	GAAGAC	1 cut(s)	675
BbvI	GCAGC	7 cut(s)	186, 426, 937, 1064, 1089, 1139, 1554
BccI	CCATC	6 cut(s)	290, 403, 664, 757, 1415, 1439
BceAI	ACGGC	3 cut(s)	79, 433, 447
BcgI	CGANNNNNNTGC	6 cut(s)	163, 197, 500, 534, 1134, 1168
BciVI	GTATCC	1 cut(s)	525
BclI	TGATCA	1 cut(s)	544
BcnI	CCSGG	3 cut(s)	96, 158, 258
BcoDI	GTCTC	5 cut(s)	296, 669, 795, 1189, 1278
BfaI	CTAG	4 cut(s)	752, 1500, 1608, 1648
BfmI	CTRYAG	2 cut(s)	286, 741
BfoI	RGCGCY	2 cut(s)	34, 294
BfuI	GTATCC	1 cut(s)	525
Bme1390I	CCNGG	3 cut(s)	96, 158, 258
Bme18I	GGWCC	2 cut(s)	767, 1424
BmeRI	GACNNNNNGTC	1 cut(s)	226
BmgT120I	GGNCC	5 cut(s)	721, 722, 737, 767, 1424
BmiI	GGNNCC	7 cut(s)	255, 262, 447, 723, 768, 828, 1106
BmrFI	CCNGG	3 cut(s)	96, 158, 258
BmsI	GCATC	5 cut(s)	340, 403, 644, 1064, 1402
BmtI	GCTAGC	1 cut(s)	755
BpiI	GAAGAC	1 cut(s)	675
BpmI	CTGGAG	1 cut(s)	1302
Bpu14I	TTCGAA	2 cut(s)	238, 1023
BpuEI	CTTGAG	2 cut(s)	521, 1468
BpuMI	CCSGG	3 cut(s)	96, 158, 258
BsaBI	GATNNNNATC	1 cut(s)	239
BsaHI	GRCGYC	1 cut(s)	126
BsaI	GGTCTC	3 cut(s)	296, 669, 1278
BsaJI	CCNNGG	3 cut(s)	129, 399, 1299
BsaWI	WCCGGW	1 cut(s)	144
BsaXI	ACNNNNNCTCC	4 cut(s)	186, 216, 1164, 1194
Bsc4I	CCNNNNNNNGG	7 cut(s)	144, 430, 731, 746, 764, 776, 1406
Bse118I	RCCGGY	1 cut(s)	144
Bse1I	ACTGG	4 cut(s)	520, 733, 809, 1594
Bse8I	GATNNNNATC	1 cut(s)	239
BseDI	CCNNGG	3 cut(s)	129, 399, 1299
BseGI	GGATG	3 cut(s)	355, 418, 547
BseJI	GATNNNNATC	1 cut(s)	239
BseLI	CCNNNNNNNGG	7 cut(s)	144, 430, 731, 746, 764, 776, 1406
BseMII	CTCAG	3 cut(s)	56, 680, 1176
BseNI	ACTGG	4 cut(s)	520, 733, 809, 1594
BseRI	GAGGAG	8 cut(s)	204, 207, 416, 419, 792, 1185, 1207, 1422
BseSI	GKGCMC	3 cut(s)	158, 258, 725
BseXI	GCAGC	7 cut(s)	186, 426, 937, 1064, 1089, 1139, 1554
BsgI	GTGCAG	2 cut(s)	1292, 1380
Bsh1236I	CGCG	1 cut(s)	1327
BshFI	GGCC	2 cut(s)	723, 739
BshNI	GGYRCC	3 cut(s)	253, 260, 445
BshTI	ACCGGT	1 cut(s)	144
BsiSI	CCGG	5 cut(s)	96, 145, 158, 258, 341
BslFI	GGGAC	1 cut(s)	1536
BslI	CCNNNNNNNGG	7 cut(s)	144, 430, 731, 746, 764, 776, 1406
BsmAI	GTCTC	5 cut(s)	296, 669, 795, 1189, 1278
BsmFI	GGGAC	1 cut(s)	1536
BsmI	GAATGC	1 cut(s)	1370
BsnI	GGCC	2 cut(s)	723, 739
Bso31I	GGTCTC	3 cut(s)	296, 669, 1278
Bsp119I	TTCGAA	2 cut(s)	238, 1023
Bsp120I	GGGCCC	1 cut(s)	721
Bsp1286I	GDGCHC	3 cut(s)	158, 258, 725
Bsp1407I	TGTACA	1 cut(s)	583
Bsp143I	GATC	3 cut(s)	544, 1027, 1104
BspANI	GGCC	2 cut(s)	723, 739
BspCNI	CTCAG	3 cut(s)	55, 679, 1177
BspFNI	CGCG	1 cut(s)	1327
BspHI	TCATGA	1 cut(s)	646
BspLI	GGNNCC	7 cut(s)	255, 262, 447, 723, 768, 828, 1106
BspOI	GCTAGC	1 cut(s)	755
BspPI	GGATC	2 cut(s)	1099, 1112
BspT104I	TTCGAA	2 cut(s)	238, 1023
BspT107I	GGYRCC	3 cut(s)	253, 260, 445
BspTNI	GGTCTC	3 cut(s)	296, 669, 1278
BsrFI	RCCGGY	1 cut(s)	144
BsrGI	TGTACA	1 cut(s)	583
BsrI	ACTGG	4 cut(s)	520, 733, 809, 1594
BssAI	RCCGGY	1 cut(s)	144
BssECI	CCNNGG	3 cut(s)	129, 399, 1299
BssMI	GATC	3 cut(s)	544, 1027, 1104
BssNI	GRCGYC	1 cut(s)	126
BssT1I	CCWWGG	1 cut(s)	1299
Bst4CI	ACNGT	8 cut(s)	139, 253, 323, 663, 1003, 1384, 1439, 1508
Bst6I	CTCTTC	3 cut(s)	181, 261, 867
BstACI	GRCGYC	1 cut(s)	126
BstAPI	GCANNNNNTGC	1 cut(s)	1367
BstAUI	TGTACA	1 cut(s)	583
BstBI	TTCGAA	2 cut(s)	238, 1023
BstC8I	GCNNGC	3 cut(s)	295, 555, 753
BstDEI	CTNAG	4 cut(s)	42, 212, 666, 1185
BstENI	CCTNNNNNAGG	2 cut(s)	774, 1404
BstF5I	GGATG	3 cut(s)	355, 418, 547
BstFNI	CGCG	1 cut(s)	1327
BstH2I	RGCGCY	2 cut(s)	34, 294
BstHHI	GCGC	4 cut(s)	33, 293, 346, 523
BstKTI	GATC	3 cut(s)	547, 1030, 1107
BstMAI	GTCTC	5 cut(s)	296, 669, 795, 1189, 1278
BstMBI	GATC	3 cut(s)	544, 1027, 1104
BstMWI	GCNNNNNNNGC	8 cut(s)	72, 75, 350, 445, 757, 1304, 1367, 1568
BstNSI	RCATGY	1 cut(s)	1319
BstSCI	CCNGG	3 cut(s)	94, 156, 256
BstSFI	CTRYAG	2 cut(s)	286, 741
BstSLI	GKGCMC	3 cut(s)	158, 258, 725
BstUI	CGCG	1 cut(s)	1327
BstV1I	GCAGC	7 cut(s)	186, 426, 937, 1064, 1089, 1139, 1554
BstV2I	GAAGAC	1 cut(s)	675
BstX2I	RGATCY	1 cut(s)	1104
BstYI	RGATCY	1 cut(s)	1104
BsuI	GTATCC	1 cut(s)	525
BsuRI	GGCC	2 cut(s)	723, 739
BtsCI	GGATG	3 cut(s)	355, 418, 547
BtsI	GCAGTG	2 cut(s)	1062, 1368
BtsIMutI	CAGTG	4 cut(s)	328, 693, 1062, 1368
Cac8I	GCNNGC	3 cut(s)	295, 555, 753
CaiI	CAGNNNCTG	1 cut(s)	1367
CciI	TCATGA	1 cut(s)	646
CfoI	GCGC	4 cut(s)	33, 293, 346, 523
Cfr10I	RCCGGY	1 cut(s)	144
Cfr13I	GGNCC	5 cut(s)	721, 722, 737, 767, 1424
CseI	GACGC	2 cut(s)	134, 1333
Csp6I	GTAC	4 cut(s)	148, 584, 820, 1587
CspAI	ACCGGT	1 cut(s)	144
CviAII	CATG	5 cut(s)	425, 647, 718, 1316, 1457
CviQI	GTAC	4 cut(s)	148, 584, 820, 1587
DdeI	CTNAG	4 cut(s)	42, 212, 666, 1185
DpnI	GATC	3 cut(s)	546, 1029, 1106
DpnII	GATC	3 cut(s)	544, 1027, 1104
DriI	GACNNNNNGTC	1 cut(s)	226
Eam1104I	CTCTTC	3 cut(s)	181, 261, 867
Eam1105I	GACNNNNNGTC	1 cut(s)	226
EarI	CTCTTC	3 cut(s)	181, 261, 867
EciI	GGCGGA	2 cut(s)	84, 1645
Eco130I	CCWWGG	1 cut(s)	1299
Eco24I	GRGCYC	1 cut(s)	725
Eco31I	GGTCTC	3 cut(s)	296, 669, 1278
Eco47I	GGWCC	2 cut(s)	767, 1424
Eco47III	AGCGCT	1 cut(s)	32
Eco57I	CTGAAG	4 cut(s)	405, 669, 999, 1275
EcoNI	CCTNNNNNAGG	2 cut(s)	774, 1404
EcoO109I	RGGNCCY	1 cut(s)	767
EcoT14I	CCWWGG	1 cut(s)	1299
EcoT38I	GRGCYC	1 cut(s)	725
ErhI	CCWWGG	1 cut(s)	1299
FaeI	CATG	5 cut(s)	428, 650, 721, 1319, 1460
FalI	AAGNNNNNCTT	6 cut(s)	591, 623, 1004, 1036, 1221, 1253
FaqI	GGGAC	1 cut(s)	1536
FatI	CATG	5 cut(s)	424, 646, 717, 1315, 1456
FauI	CCCGC	1 cut(s)	1130
FbaI	TGATCA	1 cut(s)	544
FblI	GTMKAC	1 cut(s)	219
FokI	GGATG	3 cut(s)	362, 425, 554
FriOI	GRGCYC	1 cut(s)	725
FspBI	CTAG	4 cut(s)	752, 1500, 1608, 1648
FspI	TGCGCA	1 cut(s)	522
GlaI	GCGC	4 cut(s)	32, 292, 345, 522
GsuI	CTGGAG	1 cut(s)	1302
HaeII	RGCGCY	2 cut(s)	34, 294
HaeIII	GGCC	2 cut(s)	723, 739
HapII	CCGG	5 cut(s)	96, 145, 158, 258, 341
HgaI	GACGC	2 cut(s)	134, 1333
HhaI	GCGC	4 cut(s)	33, 293, 346, 523
Hin1I	GRCGYC	1 cut(s)	126
Hin1II	CATG	5 cut(s)	428, 650, 721, 1319, 1460
Hin6I	GCGC	4 cut(s)	31, 291, 344, 521
HinP1I	GCGC	4 cut(s)	31, 291, 344, 521
HincII	GTYRAC	1 cut(s)	220
HindII	GTYRAC	1 cut(s)	220
HinfI	GANTC	5 cut(s)	235, 240, 273, 941, 1097
HpaII	CCGG	5 cut(s)	96, 145, 158, 258, 341
HphI	GGTGA	3 cut(s)	172, 413, 803
Hpy166II	GTNNAC	6 cut(s)	142, 220, 367, 713, 971, 1529
Hpy188III	TCNNGA	6 cut(s)	277, 368, 647, 1143, 1281, 1581
Hpy8I	GTNNAC	6 cut(s)	142, 220, 367, 713, 971, 1529
Hpy99I	CGWCG	2 cut(s)	128, 302
HpyAV	CCTTC	7 cut(s)	610, 653, 833, 901, 974, 1349, 1385
HpyCH4III	ACNGT	8 cut(s)	139, 253, 323, 663, 1003, 1384, 1439, 1508
HpyCH4IV	ACGT	2 cut(s)	680, 1585
HpyF10VI	GCNNNNNNNGC	8 cut(s)	72, 75, 350, 445, 757, 1304, 1367, 1568
HpyF3I	CTNAG	4 cut(s)	42, 212, 666, 1185
HpySE526I	ACGT	2 cut(s)	680, 1585
Hsp92I	GRCGYC	1 cut(s)	126
Hsp92II	CATG	5 cut(s)	428, 650, 721, 1319, 1460
HspAI	GCGC	4 cut(s)	31, 291, 344, 521
Ksp22I	TGATCA	1 cut(s)	544
Kzo9I	GATC	3 cut(s)	544, 1027, 1104
Lsp1109I	GCAGC	7 cut(s)	186, 426, 937, 1064, 1089, 1139, 1554
LweI	GCATC	5 cut(s)	340, 403, 644, 1064, 1402
MaeI	CTAG	4 cut(s)	752, 1500, 1608, 1648
MaeII	ACGT	2 cut(s)	680, 1585
MaeIII	GTNAC	9 cut(s)	20, 277, 427, 807, 1003, 1180, 1321, 1502, 1643
MalI	GATC	3 cut(s)	546, 1029, 1106
MboI	GATC	3 cut(s)	544, 1027, 1104
MflI	RGATCY	1 cut(s)	1104
MhlI	GDGCHC	3 cut(s)	158, 258, 725
MluCI	AATT	8 cut(s)	328, 471, 525, 630, 854, 1146, 1245, 1429
MlyI	GAGTC	1 cut(s)	282
MmeI	TCCRAC	6 cut(s)	81, 477, 778, 902, 1160, 1403
MroXI	GAANNNNTTC	1 cut(s)	1236
MseI	TTAA	3 cut(s)	612, 924, 995
MspA1I	CMGCKG	2 cut(s)	760, 1545
MspI	CCGG	5 cut(s)	96, 145, 158, 258, 341
MspR9I	CCNGG	3 cut(s)	96, 158, 258
Mva1269I	GAATGC	1 cut(s)	1370
MvnI	CGCG	1 cut(s)	1327
MwoI	GCNNNNNNNGC	8 cut(s)	72, 75, 350, 445, 757, 1304, 1367, 1568
NciI	CCSGG	3 cut(s)	96, 158, 258
NdeII	GATC	3 cut(s)	544, 1027, 1104
NheI	GCTAGC	1 cut(s)	751
NlaIII	CATG	5 cut(s)	428, 650, 721, 1319, 1460
NlaIV	GGNNCC	7 cut(s)	255, 262, 447, 723, 768, 828, 1106
NmeAIII	GCCGAG	4 cut(s)	154, 424, 803, 1606
NmuCI	GTSAC	4 cut(s)	277, 807, 1321, 1502
NsbI	TGCGCA	1 cut(s)	522
NspI	RCATGY	1 cut(s)	1319
NspV	TTCGAA	2 cut(s)	238, 1023
PagI	TCATGA	1 cut(s)	646
PciI	ACATGT	1 cut(s)	1315
PctI	GAATGC	1 cut(s)	1370
PdmI	GAANNNNTTC	1 cut(s)	1236
PfeI	GAWTC	4 cut(s)	235, 240, 941, 1097
PflMI	CCANNNNNTGG	1 cut(s)	731
PinAI	ACCGGT	1 cut(s)	144
PleI	GAGTC	1 cut(s)	281
PpsI	GAGTC	1 cut(s)	281
PpuMI	RGGWCCY	1 cut(s)	767
PscI	ACATGT	1 cut(s)	1315
PshBI	ATTAAT	1 cut(s)	924
PsiI	TTATAA	1 cut(s)	786
Psp5II	RGGWCCY	1 cut(s)	767
PspN4I	GGNNCC	7 cut(s)	255, 262, 447, 723, 768, 828, 1106
PspOMI	GGGCCC	1 cut(s)	721
PspPI	GGNCC	5 cut(s)	721, 722, 737, 767, 1424
PspPPI	RGGWCCY	1 cut(s)	767
PsrI	GAACNNNNNNTAC	2 cut(s)	1579, 1611
PstNI	CAGNNNCTG	1 cut(s)	1367
PsuI	RGATCY	1 cut(s)	1104
RsaI	GTAC	4 cut(s)	149, 585, 821, 1588
RsaNI	GTAC	4 cut(s)	148, 584, 820, 1587
SalI	GTCGAC	1 cut(s)	218
SaqAI	TTAA	3 cut(s)	612, 924, 995
Sau3AI	GATC	3 cut(s)	544, 1027, 1104
Sau96I	GGNCC	5 cut(s)	721, 722, 737, 767, 1424
SchI	GAGTC	1 cut(s)	282
ScrFI	CCNGG	3 cut(s)	96, 158, 258
SduI	GDGCHC	3 cut(s)	158, 258, 725
SfaNI	GCATC	5 cut(s)	340, 403, 644, 1064, 1402
SfcI	CTRYAG	2 cut(s)	286, 741
SfuI	TTCGAA	2 cut(s)	238, 1023
SinI	GGWCC	2 cut(s)	767, 1424
SmlI	CTYRAG	2 cut(s)	536, 1483
SmoI	CTYRAG	2 cut(s)	536, 1483
Sse9I	AATT	8 cut(s)	328, 471, 525, 630, 854, 1146, 1245, 1429
SspI	AATATT	2 cut(s)	889, 1213
SspMI	CTAG	4 cut(s)	752, 1500, 1608, 1648
StyD4I	CCNGG	3 cut(s)	94, 156, 256
StyI	CCWWGG	1 cut(s)	1299
TaaI	ACNGT	8 cut(s)	139, 253, 323, 663, 1003, 1384, 1439, 1508
TaiI	ACGT	2 cut(s)	683, 1588
TaqI	TCGA	6 cut(s)	123, 219, 238, 963, 1023, 1347
TasI	AATT	8 cut(s)	328, 471, 525, 630, 854, 1146, 1245, 1429
TatI	WGTACW	2 cut(s)	583, 819
TauI	GCSGC	5 cut(s)	69, 78, 81, 1418, 1548
TfiI	GAWTC	4 cut(s)	235, 240, 941, 1097
Tru1I	TTAA	3 cut(s)	612, 924, 995
Tru9I	TTAA	3 cut(s)	612, 924, 995
TscAI	CASTG	4 cut(s)	328, 693, 1062, 1368
TseFI	GTSAC	4 cut(s)	277, 807, 1321, 1502
TseI	GCWGC	7 cut(s)	174, 439, 950, 1052, 1077, 1152, 1542
Tsp45I	GTSAC	4 cut(s)	277, 807, 1321, 1502
TspDTI	ATGAA	4 cut(s)	106, 635, 852, 1278
TspGWI	ACGGA	1 cut(s)	39
TspRI	CASTG	4 cut(s)	328, 693, 1062, 1368
Van91I	CCANNNNNTGG	1 cut(s)	731
VpaK11BI	GGWCC	2 cut(s)	767, 1424
VspI	ATTAAT	1 cut(s)	924
XagI	CCTNNNNNAGG	2 cut(s)	774, 1404
XapI	RAATTY	3 cut(s)	328, 525, 854
XceI	RCATGY	1 cut(s)	1319
XmiI	GTMKAC	1 cut(s)	219
XmnI	GAANNNNTTC	1 cut(s)	1236
XspI	CTAG	4 cut(s)	752, 1500, 1608, 1648

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.