MD00G1140600.v1.1

PAPA-1-like conserved region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0012739
Physical Location & Seq
Forward (+)
30733290 .. 30737463
4174 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1140600.v1.1.491

Sequence Viewer

Length: 1758 bp
ATGGAAGACTTGGGCAATAATCATAGACTGGACAGTATAAGCAGTGCTGTAAGAAAGAAGAGAAGTCAAACGTTTCGTCGACCTCGACCTGATTCATATACTGAACTCCATGATCAGTCACCGTTGTCATCAACTACACCTTCAGATGATCAGAGCAAGGTCTCTAGTGATGAGAATGCAGGTTGTGATGCCAATTCGAAGAGAAAAGAATTAAGTCTTAATGAATGCATGGCCAGGGGGTCTTCTGCAGCAGGTAATGGCAAAAAATCTCACAAAAAGGATAGTAAGGGTGGAGGATGTAATTCGTTTTACAAGAATGAGACAGGACGAAATGGGAGCAATAACAAGCGTTCTGACGAAGGTTGCCTTGCCCCTGCTAATGGGAAGAGCTCAAGCTTAATGAAGGATGATTTGATATTGGAGTCAATAAGTGATGATGCATTTAATGGGAGAAATGGTGAAAGTCCAAGTACTAGGTTGTCAGGGTTAGATGGATGTGGAAATGAGAACAAGGTTAAAAAGGTTAAGCTCAAGGTTGGTGGTGTCACACGAACAATTCAGGCCAACTCTACATTGAATGGTACAACGGAGGGTGGGTCTTCTACAAAGACTGCTCGATTGTCAGATGTGTCTAGACCACGGCAGAAGCAAAATCTTCTGGGAAATTCGGACGATATTCATTCTCCTTCGGATAAGAAGCGAGGCTTAAAAGGAATTCCATGGAAGGATTTCTCAAGAAGTGGTGTTAGTCTTGGCAGAGATAATTATTCGATGGGCAGGACAGCAGGAAAGAATACCTCTGGAAAGGAAGGCGATATATCTGAACCAGTTCGTAAGAGCAAGCGAGTGCCTAAGAGGCGCGTCCTTGATGGAGATTTTGGAGATGAAGAAGAGGATGATGAGATTCGGTATTTGGAGAAACTCAAAATATCGAAGGTTGCTGCAGTGTATAGAGATGATGATGATGAATCAAGCAGGAAGCACAGAAAACTTTCTGCAGTTTCCAACATTGATAATGCCAGTGCATCAAGGTTGGATAAAGACCTTAAAAGGAAGTCAAGAACCGATAGAGTATCTGGAGACACTGATTATGAGGAAGAACAAGATTCTTTATCTGATGGGGAGCTTGAAGGTAAAAAGAAACAGAAGAAGGAAGCTGTTGACTCTTTGATGGATGGTAAGAAGGAAATGACTCTCACAACTCGTCAAAGGGCCCTTCAGTCGGGCAAAGATGCGGCCCCTGGTTCAAGCTTAATTGAGTTTCCTAACGGATTACCACCTGCACCATCTAGAAAGCAAAAGGAGAAACTTACAGATGTGGAGCAGCAACTGAAGAAAGCTGAGGTTGCTCAGAGACGAAGAATGCAGGTTGAGAAGGCTGCTAGGGAATCAGAGGCTGAGGCTATTAGAAAAATTCTCGGTCAAGATTCCAGCAGGAAGAAGCGAGAAGACAAGATAAAGAAGCGACAAGAGGAAATTGCACAGGAGAGGGCGGCTAATGCGTTGACACTTCCGCCAAACACCATCAGAACTGTGATGGGCCCTGTGGGTACTATAGTGACATTCTCCAACGACATGGGTCTCCCCGGTTTATTTGATGCTAAACCCTGCAGCTATCCTCCTCAGCGTGAGAATTGTGCGGGTCCATCGTGTACCAATCCATACAAGTATAGGGATTCTAAGTCCAAGCTTCCTCTTTGCAGTCTTAAGTGCTACAAGGCAATCCAGGAAAAGACGGCAGTAGAAAATACATGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAPA-1 zf-HIT

Protein Analysis

586

Amino Acids

64.32

Weight (kDa)

9.37

Isoelectric Point (pI)

51.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAPA-1 PF04795 441 - 526 7.9e-20 PAPA-1-like conserved region
zf-HIT PF04438 542 - 573 1e-06 HIT zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012739)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G47350 AT2G47350
fragaria_vesca FvH4_5g39030
malus_domestica MD00G1140600.v1.1 MD03G1292700.v1.1
prunus_persica Prupe.8G265700_v2.0.a1
pyrus_communis pycom03g23200 pycom11g27340
rosa_chinensis RchiOBHm_Chr7g0241001
rosa_laevigata RLG00000000605
rosa_multiflora Rmu_sc0003187.1_g000010
rosa_roxburghii Rroxscaffold_3G00219330
rosa_rugosa Rorug07G0341200
rosa_samantha Rh7AG496300 Rh7BG467600 Rh7CG513600 Rh7DG480800
rosa_wichuraiana Rw7G041920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1288
Acc36I ACCTGC 4 cut(s) 170, 242, 1288, 1357
AccI GTMKAC 1 cut(s) 79
AccII CGCG 1 cut(s) 861
AciI CCGC 4 cut(s) 1235, 1493, 1514, 1640
AclI AACGTT 1 cut(s) 71
AcoI YGGCCR 1 cut(s) 231
AcsI RAATTY 3 cut(s) 664, 714, 1413
AcuI CTGAAG 3 cut(s) 126, 1202, 1352
AfaI GTAC 4 cut(s) 472, 583, 1552, 1654
AfiI CCNNNNNNNGG 2 cut(s) 380, 1222
AflII CTTAAG 1 cut(s) 1706
AgsI TTSAA 3 cut(s) 577, 1130, 1248
AjnI CCWGG 3 cut(s) 233, 1240, 1725
AluBI AGCT 9 cut(s) 390, 396, 529, 1126, 1157, 1251, 1340, 1614, 1690
AluI AGCT 9 cut(s) 390, 396, 529, 1126, 1157, 1251, 1340, 1614, 1690
Alw21I GWGCWC 1 cut(s) 392
Alw26I GTCTC 5 cut(s) 166, 314, 1074, 1348, 1586
AlwNI CAGNNNCTG 2 cut(s) 1330, 1397
AoxI GGCC 5 cut(s) 231, 561, 1212, 1236, 1540
ApaI GGGCCC 2 cut(s) 1216, 1544
ApeKI GCWGC 5 cut(s) 248, 941, 1324, 1379, 1611
ApoI RAATTY 3 cut(s) 664, 714, 1413
ArsI GACNNNNNNTTYG 2 cut(s) 61, 93
Asp700I GAANNNNTTC 3 cut(s) 728, 828, 991
AspLEI GCGC 1 cut(s) 861
AspS9I GGNCC 6 cut(s) 1212, 1213, 1237, 1540, 1541, 1643
AsuC2I CCSGG 1 cut(s) 1587
AsuHPI GGTGA 2 cut(s) 111, 470
AsuII TTCGAA 1 cut(s) 197
AvaII GGWCC 1 cut(s) 1643
BaeGI GKGCMC 2 cut(s) 1216, 1544
BaeI ACNNNNGTAYC 2 cut(s) 1542, 1575
BalI TGGCCA 1 cut(s) 233
BanII GRGCYC 3 cut(s) 392, 1216, 1544
BbsI GAAGAC 4 cut(s) 12, 234, 591, 1455
Bbv12I GWGCWC 1 cut(s) 392
BbvCI CCTCAGC 3 cut(s) 1341, 1398, 1623
BbvI GCAGC 5 cut(s) 260, 928, 1336, 1366, 1623
BceAI ACGGC 2 cut(s) 656, 1752
BciT130I CCWGG 3 cut(s) 235, 1242, 1727
BclI TGATCA 2 cut(s) 112, 148
BcnI CCSGG 1 cut(s) 1587
BcoDI GTCTC 5 cut(s) 166, 314, 1074, 1348, 1586
BfaI CTAG 5 cut(s) 165, 474, 633, 1290, 1383
BfmI CTRYAG 5 cut(s) 246, 942, 996, 1554, 1609
BfrI CTTAAG 1 cut(s) 1706
BfuAI ACCTGC 4 cut(s) 170, 242, 1288, 1357
BglI GCCNNNNNGGC 1 cut(s) 856
BisI GCNGC 7 cut(s) 249, 942, 1236, 1325, 1380, 1494, 1612
BlsI GCNGC 7 cut(s) 250, 943, 1237, 1326, 1381, 1495, 1613
BmcAI AGTACT 1 cut(s) 472
Bme1390I CCNGG 4 cut(s) 235, 1242, 1587, 1727
Bme18I GGWCC 1 cut(s) 1643
BmgT120I GGNCC 6 cut(s) 1212, 1213, 1237, 1540, 1541, 1643
BmiI GGNNCC 4 cut(s) 1214, 1239, 1542, 1644
BmrFI CCNGG 4 cut(s) 235, 1242, 1587, 1727
BmsI GCATC 5 cut(s) 178, 427, 1034, 1222, 1588
BoxI GACNNNNGTC 1 cut(s) 1578
BpiI GAAGAC 4 cut(s) 12, 234, 591, 1455
BpmI CTGGAG 1 cut(s) 1098
Bpu10I CCTNAGC 3 cut(s) 1341, 1398, 1623
Bpu14I TTCGAA 1 cut(s) 197
BpuEI CTTGAG 3 cut(s) 376, 515, 718
BpuMI CCSGG 1 cut(s) 1587
BsaI GGTCTC 2 cut(s) 166, 1586
BsaJI CCNNGG 5 cut(s) 234, 638, 719, 1240, 1585
BsaXI ACNNNNNCTCC 4 cut(s) 442, 472, 581, 611
Bsc4I CCNNNNNNNGG 2 cut(s) 380, 1222
Bse1I ACTGG 3 cut(s) 33, 827, 1020
BseBI CCWGG 3 cut(s) 235, 1242, 1727
BseDI CCNNGG 5 cut(s) 234, 638, 719, 1240, 1585
BseGI GGATG 5 cut(s) 302, 412, 500, 901, 1180
BseLI CCNNNNNNNGG 2 cut(s) 380, 1222
BseMII CTCAG 4 cut(s) 1332, 1364, 1389, 1637
BseNI ACTGG 3 cut(s) 33, 827, 1020
BseRI GAGGAG 1 cut(s) 1611
BseSI GKGCMC 2 cut(s) 1216, 1544
BseXI GCAGC 5 cut(s) 260, 928, 1336, 1366, 1623
BsgI GTGCAG 1 cut(s) 1266
Bsh1236I CGCG 1 cut(s) 861
BshFI GGCC 5 cut(s) 233, 563, 1214, 1238, 1542
BsiHKAI GWGCWC 1 cut(s) 392
BsiSI CCGG 1 cut(s) 1587
BslI CCNNNNNNNGG 2 cut(s) 380, 1222
BsmAI GTCTC 5 cut(s) 166, 314, 1074, 1348, 1586
BsmBI CGTCTC 1 cut(s) 1348
BsmI GAATGC 3 cut(s) 181, 230, 1368
BsnI GGCC 5 cut(s) 233, 563, 1214, 1238, 1542
Bso31I GGTCTC 2 cut(s) 166, 1586
Bsp119I TTCGAA 1 cut(s) 197
Bsp120I GGGCCC 2 cut(s) 1212, 1540
Bsp1286I GDGCHC 3 cut(s) 392, 1216, 1544
Bsp143I GATC 2 cut(s) 112, 148
Bsp19I CCATGG 1 cut(s) 719
BspACI CCGC 4 cut(s) 1235, 1493, 1514, 1640
BspANI GGCC 5 cut(s) 233, 563, 1214, 1238, 1542
BspCNI CTCAG 4 cut(s) 1333, 1363, 1390, 1636
BspFNI CGCG 1 cut(s) 861
BspLI GGNNCC 4 cut(s) 1214, 1239, 1542, 1644
BspMAI CTGCAG 4 cut(s) 250, 946, 1000, 1613
BspMI ACCTGC 4 cut(s) 170, 242, 1288, 1357
BspQI GCTCTTC 1 cut(s) 380
BspT104I TTCGAA 1 cut(s) 197
BspTI CTTAAG 1 cut(s) 1706
BspTNI GGTCTC 2 cut(s) 166, 1586
BsrI ACTGG 3 cut(s) 33, 827, 1020
BssECI CCNNGG 5 cut(s) 234, 638, 719, 1240, 1585
BssMI GATC 2 cut(s) 112, 148
BssT1I CCWWGG 1 cut(s) 719
Bst2UI CCWGG 3 cut(s) 235, 1242, 1727
Bst4CI ACNGT 3 cut(s) 35, 123, 1534
Bst6I CTCTTC 4 cut(s) 53, 194, 380, 885
BstAFI CTTAAG 1 cut(s) 1706
BstBI TTCGAA 1 cut(s) 197
BstC8I GCNNGC 1 cut(s) 842
BstDEI CTNAG 6 cut(s) 852, 1341, 1350, 1398, 1623, 1680
BstDSI CCRYGG 2 cut(s) 638, 719
BstF5I GGATG 5 cut(s) 302, 412, 500, 901, 1180
BstFNI CGCG 1 cut(s) 861
BstHHI GCGC 1 cut(s) 861
BstKTI GATC 2 cut(s) 115, 151
BstMAI GTCTC 5 cut(s) 166, 314, 1074, 1348, 1586
BstMBI GATC 2 cut(s) 112, 148
BstMWI GCNNNNNNNGC 3 cut(s) 856, 1346, 1499
BstNI CCWGG 3 cut(s) 235, 1242, 1727
BstNSI RCATGY 1 cut(s) 1755
BstPAI GACNNNNGTC 1 cut(s) 1578
BstSCI CCNGG 4 cut(s) 233, 1240, 1585, 1725
BstSFI CTRYAG 5 cut(s) 246, 942, 996, 1554, 1609
BstSLI GKGCMC 2 cut(s) 1216, 1544
BstUI CGCG 1 cut(s) 861
BstV1I GCAGC 5 cut(s) 260, 928, 1336, 1366, 1623
BstV2I GAAGAC 4 cut(s) 12, 234, 591, 1455
BstXI CCANNNNNNTGG 1 cut(s) 1576
BsuRI GGCC 5 cut(s) 233, 563, 1214, 1238, 1542
BtgI CCRYGG 2 cut(s) 638, 719
BtsCI GGATG 5 cut(s) 302, 412, 500, 901, 1180
BtsI GCAGTG 2 cut(s) 49, 951
BtsIMutI CAGTG 4 cut(s) 49, 951, 1027, 1083
BveI ACCTGC 4 cut(s) 170, 242, 1288, 1357
Cac8I GCNNGC 1 cut(s) 842
CaiI CAGNNNCTG 2 cut(s) 1330, 1397
CfoI GCGC 1 cut(s) 861
Cfr13I GGNCC 6 cut(s) 1212, 1213, 1237, 1540, 1541, 1643
CseI GACGC 1 cut(s) 850
Csp6I GTAC 4 cut(s) 471, 582, 1551, 1653
CspCI CAANNNNNGTGG 2 cut(s) 520, 555
CviAII CATG 5 cut(s) 110, 229, 720, 1576, 1752
CviQI GTAC 4 cut(s) 471, 582, 1551, 1653
DdeI CTNAG 6 cut(s) 852, 1341, 1350, 1398, 1623, 1680
DpnI GATC 2 cut(s) 114, 150
DpnII GATC 2 cut(s) 112, 148
EaeI YGGCCR 1 cut(s) 231
Eam1104I CTCTTC 4 cut(s) 53, 194, 380, 885
EarI CTCTTC 4 cut(s) 53, 194, 380, 885
EciI GGCGGA 1 cut(s) 1503
Ecl136II GAGCTC 1 cut(s) 390
Eco130I CCWWGG 1 cut(s) 719
Eco24I GRGCYC 3 cut(s) 392, 1216, 1544
Eco31I GGTCTC 2 cut(s) 166, 1586
Eco47I GGWCC 1 cut(s) 1643
Eco53kI GAGCTC 1 cut(s) 390
Eco57I CTGAAG 3 cut(s) 126, 1202, 1352
EcoICRI GAGCTC 1 cut(s) 390
EcoO109I RGGNCCY 3 cut(s) 1212, 1213, 1541
EcoRI GAATTC 1 cut(s) 714
EcoRII CCWGG 3 cut(s) 233, 1240, 1725
EcoT14I CCWWGG 1 cut(s) 719
EcoT22I ATGCAT 2 cut(s) 230, 442
EcoT38I GRGCYC 3 cut(s) 392, 1216, 1544
ErhI CCWWGG 1 cut(s) 719
Esp3I CGTCTC 1 cut(s) 1348
FaeI CATG 5 cut(s) 113, 232, 723, 1579, 1755
FalI AAGNNNNNCTT 4 cut(s) 351, 383, 689, 721
FatI CATG 5 cut(s) 109, 228, 719, 1575, 1751
FauI CCCGC 1 cut(s) 1633
FbaI TGATCA 2 cut(s) 112, 148
FblI GTMKAC 1 cut(s) 79
Fnu4HI GCNGC 7 cut(s) 249, 942, 1236, 1325, 1380, 1494, 1612
FokI GGATG 5 cut(s) 309, 419, 507, 908, 1187
FriOI GRGCYC 3 cut(s) 392, 1216, 1544
Fsp4HI GCNGC 7 cut(s) 249, 942, 1236, 1325, 1380, 1494, 1612
FspBI CTAG 5 cut(s) 165, 474, 633, 1290, 1383
GlaI GCGC 1 cut(s) 860
GluI GCNGC 7 cut(s) 249, 942, 1236, 1325, 1380, 1494, 1612
GsuI CTGGAG 1 cut(s) 1098
HaeIII GGCC 5 cut(s) 233, 563, 1214, 1238, 1542
HapII CCGG 1 cut(s) 1587
HgaI GACGC 1 cut(s) 850
HhaI GCGC 1 cut(s) 861
Hin1II CATG 5 cut(s) 113, 232, 723, 1579, 1755
Hin6I GCGC 1 cut(s) 859
HinP1I GCGC 1 cut(s) 859
HincII GTYRAC 3 cut(s) 80, 1162, 1506
HindII GTYRAC 3 cut(s) 80, 1162, 1506
HindIII AAGCTT 3 cut(s) 394, 1249, 1688
HpaII CCGG 1 cut(s) 1587
HphI GGTGA 2 cut(s) 111, 470
Hpy166II GTNNAC 4 cut(s) 80, 1162, 1506, 1653
Hpy188III TCNNGA 7 cut(s) 633, 735, 801, 1059, 1077, 1290, 1424
Hpy8I GTNNAC 4 cut(s) 80, 1162, 1506, 1653
Hpy99I CGWCG 1 cut(s) 81
HpyCH4III ACNGT 3 cut(s) 35, 123, 1534
HpyCH4IV ACGT 1 cut(s) 71
HpyF10VI GCNNNNNNNGC 3 cut(s) 856, 1346, 1499
HpyF3I CTNAG 6 cut(s) 852, 1341, 1350, 1398, 1623, 1680
HpySE526I ACGT 1 cut(s) 71
Hsp92II CATG 5 cut(s) 113, 232, 723, 1579, 1755
HspAI GCGC 1 cut(s) 859
Ksp22I TGATCA 2 cut(s) 112, 148
Kzo9I GATC 2 cut(s) 112, 148
LguI GCTCTTC 1 cut(s) 380
LmnI GCTCC 3 cut(s) 336, 1123, 1321
Lsp1109I GCAGC 5 cut(s) 260, 928, 1336, 1366, 1623
LweI GCATC 5 cut(s) 178, 427, 1034, 1222, 1588
MaeI CTAG 5 cut(s) 165, 474, 633, 1290, 1383
MaeII ACGT 1 cut(s) 71
MaeIII GTNAC 3 cut(s) 117, 544, 1558
MalI GATC 2 cut(s) 114, 150
MboI GATC 2 cut(s) 112, 148
MhlI GDGCHC 3 cut(s) 392, 1216, 1544
MlsI TGGCCA 1 cut(s) 233
MluNI TGGCCA 1 cut(s) 233
MlyI GAGTC 3 cut(s) 431, 1157, 1186
MmeI TCCRAC 3 cut(s) 1014, 1029, 1593
Mox20I TGGCCA 1 cut(s) 233
Mph1103I ATGCAT 2 cut(s) 230, 442
MroXI GAANNNNTTC 3 cut(s) 728, 828, 991
MscI TGGCCA 1 cut(s) 233
Msp20I TGGCCA 1 cut(s) 233
MspCI CTTAAG 1 cut(s) 1706
MspI CCGG 1 cut(s) 1587
MspR9I CCNGG 4 cut(s) 235, 1242, 1587, 1727
Mva1269I GAATGC 3 cut(s) 181, 230, 1368
MvaI CCWGG 3 cut(s) 235, 1242, 1727
MvnI CGCG 1 cut(s) 861
MwoI GCNNNNNNNGC 3 cut(s) 856, 1346, 1499
NciI CCSGG 1 cut(s) 1587
NcoI CCATGG 1 cut(s) 719
NdeII GATC 2 cut(s) 112, 148
NlaIII CATG 5 cut(s) 113, 232, 723, 1579, 1755
NlaIV GGNNCC 4 cut(s) 1214, 1239, 1542, 1644
NmuCI GTSAC 3 cut(s) 117, 544, 1558
NsiI ATGCAT 2 cut(s) 230, 442
NspI RCATGY 1 cut(s) 1755
NspV TTCGAA 1 cut(s) 197
PaqCI CACCTGC 1 cut(s) 1288
PciSI GCTCTTC 1 cut(s) 380
PcsI WCGNNNNNNNCGW 1 cut(s) 82
PctI GAATGC 3 cut(s) 181, 230, 1368
PdmI GAANNNNTTC 3 cut(s) 728, 828, 991
PfeI GAWTC 7 cut(s) 92, 904, 968, 1106, 1388, 1427, 1676
PfoI TCCNGGA 1 cut(s) 1725
PkrI GCNGC 7 cut(s) 250, 943, 1237, 1326, 1381, 1495, 1613
PleI GAGTC 3 cut(s) 430, 1157, 1186
PpsI GAGTC 3 cut(s) 430, 1157, 1186
PshAI GACNNNNGTC 1 cut(s) 1578
Psp124BI GAGCTC 1 cut(s) 392
Psp1406I AACGTT 1 cut(s) 71
Psp6I CCWGG 3 cut(s) 233, 1240, 1725
PspGI CCWGG 3 cut(s) 233, 1240, 1725
PspN4I GGNNCC 4 cut(s) 1214, 1239, 1542, 1644
PspOMI GGGCCC 2 cut(s) 1212, 1540
PspPI GGNCC 6 cut(s) 1212, 1213, 1237, 1540, 1541, 1643
PstI CTGCAG 4 cut(s) 250, 946, 1000, 1613
PstNI CAGNNNCTG 2 cut(s) 1330, 1397
RsaI GTAC 4 cut(s) 472, 583, 1552, 1654
RsaNI GTAC 4 cut(s) 471, 582, 1551, 1653
SacI GAGCTC 1 cut(s) 392
SalI GTCGAC 1 cut(s) 78
SapI GCTCTTC 1 cut(s) 380
SatI GCNGC 7 cut(s) 249, 942, 1236, 1325, 1380, 1494, 1612
Sau3AI GATC 2 cut(s) 112, 148
Sau96I GGNCC 6 cut(s) 1212, 1213, 1237, 1540, 1541, 1643
ScaI AGTACT 1 cut(s) 472
SchI GAGTC 3 cut(s) 431, 1157, 1186
ScrFI CCNGG 4 cut(s) 235, 1242, 1587, 1727
SduI GDGCHC 3 cut(s) 392, 1216, 1544
SfaNI GCATC 5 cut(s) 178, 427, 1034, 1222, 1588
SfcI CTRYAG 5 cut(s) 246, 942, 996, 1554, 1609
SfuI TTCGAA 1 cut(s) 197
SinI GGWCC 1 cut(s) 1643
SmlI CTYRAG 4 cut(s) 391, 530, 733, 1706
SmoI CTYRAG 4 cut(s) 391, 530, 733, 1706
SsiI CCGC 4 cut(s) 1235, 1493, 1514, 1640
SspMI CTAG 5 cut(s) 165, 474, 633, 1290, 1383
SstI GAGCTC 1 cut(s) 392
StyD4I CCNGG 4 cut(s) 233, 1240, 1585, 1725
StyI CCWWGG 1 cut(s) 719
TaaI ACNGT 3 cut(s) 35, 123, 1534
TaiI ACGT 1 cut(s) 74
TaqI TCGA 6 cut(s) 79, 85, 197, 616, 770, 932
TaqII GACCGA 1 cut(s) 1409
TatI WGTACW 1 cut(s) 470
TauI GCSGC 2 cut(s) 1238, 1496
TfiI GAWTC 7 cut(s) 92, 904, 968, 1106, 1388, 1427, 1676
TscAI CASTG 4 cut(s) 49, 951, 1027, 1090
TseFI GTSAC 3 cut(s) 117, 544, 1558
TseI GCWGC 5 cut(s) 248, 941, 1324, 1379, 1611
Tsp45I GTSAC 3 cut(s) 117, 544, 1558
TspDTI ATGAA 6 cut(s) 84, 237, 416, 668, 900, 981
TspGWI ACGGA 2 cut(s) 602, 1284
TspRI CASTG 4 cut(s) 49, 951, 1027, 1090
Vha464I CTTAAG 1 cut(s) 1706
VpaK11BI GGWCC 1 cut(s) 1643
XapI RAATTY 3 cut(s) 664, 714, 1413
XbaI TCTAGA 2 cut(s) 632, 1289
XceI RCATGY 1 cut(s) 1755
XmiI GTMKAC 1 cut(s) 79
XmnI GAANNNNTTC 3 cut(s) 728, 828, 991
XspI CTAG 5 cut(s) 165, 474, 633, 1290, 1383
ZrmI AGTACT 1 cut(s) 472
Zsp2I ATGCAT 2 cut(s) 230, 442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.