Prupe.8G265700_v2.0.a1

PAPA-1-like conserved region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0012739
Physical Location & Seq
Forward (+)
22252702 .. 22257118
4417 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G265700.1

Sequence Viewer

Length: 1758 bp
ATGGAAAACATTAGCAATAGTCATAGATTGGACAGTATCAGCAATGCTGTAAGAAGGAAGAGAAGTCAAACTTTTCGTCGACCTCGACCTGATTCACAGCCATACAATGAACTCCATGATCAGTCATCATTGTCATCAGCGACACCTTCAGATGATCAGAGCAAGGTCTCAAGTGATGAGAATGCAGGTTGTGATGCCAATTCTAAAAGAAAAGAATGTAGTCTTAATGAATGTATGGCCAGGGTTTCTTCTGCTGTAGGCAACGGTGAAAAACCTCACAAAAATGATAGCAAGGATGGTGAATTTAATTCATTTTACAATAATGAGCCAGGACGAAATGGGATCAATAACAAAAGGTCTAGCGAAGGTGTCCTTGCTCCCGCTAATTGGAAAAGCACAAGCATAATGAAGGATGGTTTGATATCAGAGTCAAGAAGTGCTGATGCATTTGACGGGATGAATGGTGAAAGTCCAAGTACTAGGTTGTCAGGATTAGATGGATTTGGAAATGAGAACAAGGTAAAAAAGGTTAAGCTCAAGGTTGGTGGTGTCACGCGTACAATTCAGGCCAACTCTGCATTCAATGGTACAGCAGAGGGTGGGTCTTCTACGAAGACTTCTCGATTGTCAGATGTCTCTAGACAGCGGCAGAAGCCAAATCTTCCGGAAAATTCAGATGATAATCATTCCCCTTCAGATAAGAAGAGCGGCTTAAAAGGAATTCCGTGGAAGGATTTTTCGAGAAGTGGTTTCAGTCTTGGGAGGGATAATTGTTCGATGGGCAGGATATCGGGAAAAAACACCTCTGGAAAGGAAGGAGATAGATCTGAACCAGTTCGTAAGAGCAAGCGGGTGCCTAAGAGGCGTGTTCTTGATGGAGAATTTGGAGATGATGAAGAGGATGATGAGATTCGGTATCTGGAGAAACTCAAGACATCGAAGGTTACTGCAGGGTATAGAGAAAATGACGAAGAGTCTAGCAAGAAACATAGAAAACTTTCCGCAGTTTCTAATAGTGATAATGCTGGTGCATCAAGGTTGGGAAAAGACCTTAAGAAGAAGTCGAGAACAGATAGAGCATCTGGAGACACTGATTATGAGGAAGATGAAGATTCATTATCTGATGGTGAGCTTGAAGGTAAAAAGAAACAGAAGAAGGAATCTGTTGACTCTTTGATGGATGGTAAGAAGGAAATGACTCTCACAACTCGTCAACGGGCCCTTCAGTCAAGCAAAGATGTCTCTTCATCCCCTGGTTCAAGCTTAATTGAGTTTCCAAATGGATTACCACCTGCACCGTCTAGAAAACAAAAGGGGAAACTTTCGGATGTGGAGCAGCAACTGAAGAAAGCTGAGGCTGCTCAGAGACGCAGAATGCAGGTTGAGAAGGCCGCTAGGGAATCAGAGGCTGAGGCTATTAGAAAGATACTTGGTCAAGATTCCAGCAGGAAGAAGCGCGAAGACAAGATAAAGAAGCGCCAAGAAGAATTGGCACAGGAGAAGGCTGCTAACATGTTGACACTTCCATCAAACTCCATCAGATACGTGATGGGCCCAACGGGGACTGTAGTGATATTCTCTAATGATATGGGTCTCCCCAGTTTATTTGACTCTAAACCCTGCAGTTATCCTCCTCCGCGTGAGAATTGTGCGGGTCCATCATGTACCAACCCGTACAAGTATAGGGATTCTAAGTCAAAGCTTCCTCTTTGCAGTCTTAAGTGCTACAAGGCAATCCAGGAAAAGATGCAAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAPA-1 zf-HIT

Protein Analysis

586

Amino Acids

64.54

Weight (kDa)

9.39

Isoelectric Point (pI)

54.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012739)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G47350 AT2G47350
fragaria_vesca FvH4_5g39030
malus_domestica MD00G1140600.v1.1 MD03G1292700.v1.1
prunus_persica Prupe.8G265700_v2.0.a1
pyrus_communis pycom03g23200 pycom11g27340
rosa_chinensis RchiOBHm_Chr7g0241001
rosa_laevigata RLG00000000605
rosa_multiflora Rmu_sc0003187.1_g000010
rosa_roxburghii Rroxscaffold_3G00219330
rosa_rugosa Rorug07G0341200
rosa_samantha Rh7AG496300 Rh7BG467600 Rh7CG513600 Rh7DG480800
rosa_wichuraiana Rw7G041920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1300
Acc36I ACCTGC 3 cut(s) 176, 1300, 1369
AccB1I GGYRCC 1 cut(s) 853
AccBSI CCGCTC 1 cut(s) 708
AccI GTMKAC 1 cut(s) 79
AccII CGCG 3 cut(s) 556, 1458, 1639
AccIII TCCGGA 1 cut(s) 664
AciI CCGC 8 cut(s) 381, 646, 708, 850, 1002, 1392, 1637, 1652
AclWI GGATC 1 cut(s) 350
AcoI YGGCCR 1 cut(s) 237
AcsI RAATTY 4 cut(s) 302, 670, 720, 881
AcuI CTGAAG 4 cut(s) 132, 678, 1208, 1364
AfaI GTAC 5 cut(s) 478, 559, 589, 1666, 1676
AfiI CCNNNNNNNGG 1 cut(s) 387
AflII CTTAAG 2 cut(s) 1052, 1718
AflIII ACRYGT 2 cut(s) 554, 1512
AgsI TTSAA 3 cut(s) 583, 1136, 1260
AhdI GACNNNNNGTC 1 cut(s) 973
AjnI CCWGG 4 cut(s) 239, 328, 1252, 1737
AjuI GAANNNNNNNTTGG 2 cut(s) 563, 595
AluBI AGCT 5 cut(s) 535, 1132, 1263, 1352, 1702
AluI AGCT 5 cut(s) 535, 1132, 1263, 1352, 1702
Alw26I GTCTC 6 cut(s) 172, 640, 1080, 1246, 1360, 1598
AlwI GGATC 1 cut(s) 350
AlwNI CAGNNNCTG 2 cut(s) 1342, 1409
Aor13HI TCCGGA 1 cut(s) 664
AoxI GGCC 5 cut(s) 237, 567, 1218, 1389, 1552
ApaI GGGCCC 2 cut(s) 1222, 1556
ApeKI GCWGC 3 cut(s) 1336, 1358, 1505
ApoI RAATTY 4 cut(s) 302, 670, 720, 881
ArsI GACNNNNNNTTYG 2 cut(s) 61, 93
Asp700I GAANNNNTTC 2 cut(s) 834, 997
AspLEI GCGC 2 cut(s) 1458, 1479
AspS9I GGNCC 5 cut(s) 1218, 1219, 1552, 1553, 1655
AsuHPI GGTGA 4 cut(s) 278, 311, 476, 1139
AvaII GGWCC 1 cut(s) 1655
BaeGI GKGCMC 2 cut(s) 1222, 1556
BalI TGGCCA 1 cut(s) 239
BanI GGYRCC 1 cut(s) 853
BanII GRGCYC 2 cut(s) 1222, 1556
BbsI GAAGAC 3 cut(s) 597, 620, 1467
BbvCI CCTCAGC 2 cut(s) 1353, 1410
BbvI GCAGC 3 cut(s) 1345, 1348, 1492
BciT130I CCWGG 4 cut(s) 241, 330, 1254, 1739
BclI TGATCA 2 cut(s) 118, 154
BcoDI GTCTC 6 cut(s) 172, 640, 1080, 1246, 1360, 1598
BfaI CTAG 6 cut(s) 360, 480, 639, 978, 1302, 1395
BfmI CTRYAG 4 cut(s) 255, 948, 1566, 1621
BfoI RGCGCY 1 cut(s) 1480
BfrI CTTAAG 2 cut(s) 1052, 1718
BfuAI ACCTGC 3 cut(s) 176, 1300, 1369
BglI GCCNNNNNGGC 1 cut(s) 862
BglII AGATCT 1 cut(s) 824
BisI GCNGC 6 cut(s) 647, 709, 1337, 1359, 1392, 1506
BlsI GCNGC 6 cut(s) 648, 710, 1338, 1360, 1393, 1507
BmcAI AGTACT 1 cut(s) 478
Bme1390I CCNGG 4 cut(s) 241, 330, 1254, 1739
Bme18I GGWCC 1 cut(s) 1655
BmeRI GACNNNNNGTC 1 cut(s) 973
BmgT120I GGNCC 5 cut(s) 1218, 1219, 1552, 1553, 1655
BmiI GGNNCC 4 cut(s) 855, 1220, 1554, 1656
BmrFI CCNGG 4 cut(s) 241, 330, 1254, 1739
BmrI ACTGGG 1 cut(s) 1593
BmsI GCATC 5 cut(s) 184, 433, 1040, 1088, 1737
BmuI ACTGGG 1 cut(s) 1593
BpiI GAAGAC 3 cut(s) 597, 620, 1467
BpmI CTGGAG 2 cut(s) 941, 1104
Bpu10I CCTNAGC 2 cut(s) 1353, 1410
BpuEI CTTGAG 3 cut(s) 154, 521, 914
BsaAI YACGTR 1 cut(s) 1546
BsaBI GATNNNNATC 1 cut(s) 681
BsaI GGTCTC 2 cut(s) 172, 1598
BsaJI CCNNGG 3 cut(s) 240, 725, 1252
BsaWI WCCGGW 1 cut(s) 664
Bsc4I CCNNNNNNNGG 1 cut(s) 387
Bse1I ACTGG 2 cut(s) 833, 1599
Bse3DI GCAATG 1 cut(s) 49
Bse8I GATNNNNATC 1 cut(s) 681
BseAI TCCGGA 1 cut(s) 664
BseBI CCWGG 4 cut(s) 241, 330, 1254, 1739
BseDI CCNNGG 3 cut(s) 240, 725, 1252
BseGI GGATG 7 cut(s) 301, 418, 462, 907, 1186, 1247, 1333
BseJI GATNNNNATC 1 cut(s) 681
BseLI CCNNNNNNNGG 1 cut(s) 387
BseMI GCAATG 1 cut(s) 49
BseMII CTCAG 3 cut(s) 1344, 1376, 1401
BseNI ACTGG 2 cut(s) 833, 1599
BseRI GAGGAG 1 cut(s) 1623
BseSI GKGCMC 2 cut(s) 1222, 1556
BseXI GCAGC 3 cut(s) 1345, 1348, 1492
BsgI GTGCAG 1 cut(s) 1278
Bsh1236I CGCG 3 cut(s) 556, 1458, 1639
BshFI GGCC 5 cut(s) 239, 569, 1220, 1391, 1554
BshNI GGYRCC 1 cut(s) 853
BsiSI CCGG 1 cut(s) 665
BslFI GGGAC 1 cut(s) 1576
BslI CCNNNNNNNGG 1 cut(s) 387
BsmAI GTCTC 6 cut(s) 172, 640, 1080, 1246, 1360, 1598
BsmBI CGTCTC 1 cut(s) 1360
BsmFI GGGAC 1 cut(s) 1576
BsmI GAATGC 3 cut(s) 187, 578, 1380
BsnI GGCC 5 cut(s) 239, 569, 1220, 1391, 1554
Bso31I GGTCTC 2 cut(s) 172, 1598
Bsp120I GGGCCC 2 cut(s) 1218, 1552
Bsp1286I GDGCHC 2 cut(s) 1222, 1556
Bsp13I TCCGGA 1 cut(s) 664
Bsp143I GATC 4 cut(s) 118, 154, 342, 824
BspACI CCGC 8 cut(s) 381, 646, 708, 850, 1002, 1392, 1637, 1652
BspANI GGCC 5 cut(s) 239, 569, 1220, 1391, 1554
BspCNI CTCAG 3 cut(s) 1345, 1375, 1402
BspEI TCCGGA 1 cut(s) 664
BspFNI CGCG 3 cut(s) 556, 1458, 1639
BspLI GGNNCC 4 cut(s) 855, 1220, 1554, 1656
BspMAI CTGCAG 2 cut(s) 952, 1625
BspMI ACCTGC 3 cut(s) 176, 1300, 1369
BspPI GGATC 1 cut(s) 350
BspQI GCTCTTC 1 cut(s) 698
BspT107I GGYRCC 1 cut(s) 853
BspTI CTTAAG 2 cut(s) 1052, 1718
BspTNI GGTCTC 2 cut(s) 172, 1598
BsrBI CCGCTC 1 cut(s) 708
BsrDI GCAATG 1 cut(s) 49
BsrI ACTGG 2 cut(s) 833, 1599
BssECI CCNNGG 3 cut(s) 240, 725, 1252
BssMI GATC 4 cut(s) 118, 154, 342, 824
Bst2UI CCWGG 4 cut(s) 241, 330, 1254, 1739
Bst4CI ACNGT 4 cut(s) 35, 266, 1299, 1567
Bst6I CTCTTC 5 cut(s) 53, 698, 891, 966, 1249
BstAFI CTTAAG 2 cut(s) 1052, 1718
BstBAI YACGTR 1 cut(s) 1546
BstC8I GCNNGC 2 cut(s) 848, 1752
BstDEI CTNAG 5 cut(s) 858, 1353, 1362, 1410, 1692
BstDSI CCRYGG 1 cut(s) 725
BstF5I GGATG 7 cut(s) 301, 418, 462, 907, 1186, 1247, 1333
BstFNI CGCG 3 cut(s) 556, 1458, 1639
BstH2I RGCGCY 1 cut(s) 1480
BstHHI GCGC 2 cut(s) 1458, 1479
BstKTI GATC 4 cut(s) 121, 157, 345, 827
BstMAI GTCTC 6 cut(s) 172, 640, 1080, 1246, 1360, 1598
BstMBI GATC 4 cut(s) 118, 154, 342, 824
BstMWI GCNNNNNNNGC 4 cut(s) 575, 652, 862, 1358
BstNI CCWGG 4 cut(s) 241, 330, 1254, 1739
BstNSI RCATGY 1 cut(s) 1516
BstSCI CCNGG 4 cut(s) 239, 328, 1252, 1737
BstSFI CTRYAG 4 cut(s) 255, 948, 1566, 1621
BstSLI GKGCMC 2 cut(s) 1222, 1556
BstUI CGCG 3 cut(s) 556, 1458, 1639
BstV1I GCAGC 3 cut(s) 1345, 1348, 1492
BstV2I GAAGAC 3 cut(s) 597, 620, 1467
BstX2I RGATCY 1 cut(s) 824
BstYI RGATCY 1 cut(s) 824
BsuRI GGCC 5 cut(s) 239, 569, 1220, 1391, 1554
BtgI CCRYGG 1 cut(s) 725
BtsCI GGATG 7 cut(s) 301, 418, 462, 907, 1186, 1247, 1333
BtsIMutI CAGTG 1 cut(s) 1089
BveI ACCTGC 3 cut(s) 176, 1300, 1369
Cac8I GCNNGC 2 cut(s) 848, 1752
CaiI CAGNNNCTG 2 cut(s) 1342, 1409
CfoI GCGC 2 cut(s) 1458, 1479
Cfr13I GGNCC 5 cut(s) 1218, 1219, 1552, 1553, 1655
CseI GACGC 1 cut(s) 1377
Csp6I GTAC 5 cut(s) 477, 558, 588, 1665, 1675
CspCI CAANNNNNGTGG 2 cut(s) 526, 561
CviAII CATG 4 cut(s) 116, 1513, 1662, 1755
CviQI GTAC 5 cut(s) 477, 558, 588, 1665, 1675
DdeI CTNAG 5 cut(s) 858, 1353, 1362, 1410, 1692
DpnI GATC 4 cut(s) 120, 156, 344, 826
DpnII GATC 4 cut(s) 118, 154, 342, 824
DriI GACNNNNNGTC 1 cut(s) 973
EaeI YGGCCR 1 cut(s) 237
Eam1104I CTCTTC 5 cut(s) 53, 698, 891, 966, 1249
Eam1105I GACNNNNNGTC 1 cut(s) 973
EarI CTCTTC 5 cut(s) 53, 698, 891, 966, 1249
Eco24I GRGCYC 2 cut(s) 1222, 1556
Eco31I GGTCTC 2 cut(s) 172, 1598
Eco32I GATATC 2 cut(s) 423, 789
Eco47I GGWCC 1 cut(s) 1655
Eco57I CTGAAG 4 cut(s) 132, 678, 1208, 1364
EcoO109I RGGNCCY 1 cut(s) 1219
EcoRI GAATTC 1 cut(s) 720
EcoRII CCWGG 4 cut(s) 239, 328, 1252, 1737
EcoRV GATATC 2 cut(s) 423, 789
EcoT22I ATGCAT 1 cut(s) 448
EcoT38I GRGCYC 2 cut(s) 1222, 1556
Esp3I CGTCTC 1 cut(s) 1360
FaeI CATG 4 cut(s) 119, 1516, 1665, 1758
FalI AAGNNNNNCTT 6 cut(s) 55, 87, 357, 389, 695, 727
FaqI GGGAC 1 cut(s) 1576
FatI CATG 4 cut(s) 115, 1512, 1661, 1754
FauI CCCGC 3 cut(s) 388, 843, 1645
FbaI TGATCA 2 cut(s) 118, 154
FblI GTMKAC 1 cut(s) 79
Fnu4HI GCNGC 6 cut(s) 647, 709, 1337, 1359, 1392, 1506
FokI GGATG 7 cut(s) 308, 425, 469, 914, 1193, 1234, 1340
FriOI GRGCYC 2 cut(s) 1222, 1556
Fsp4HI GCNGC 6 cut(s) 647, 709, 1337, 1359, 1392, 1506
FspBI CTAG 6 cut(s) 360, 480, 639, 978, 1302, 1395
GlaI GCGC 2 cut(s) 1457, 1478
GluI GCNGC 6 cut(s) 647, 709, 1337, 1359, 1392, 1506
GsuI CTGGAG 2 cut(s) 941, 1104
HaeII RGCGCY 1 cut(s) 1480
HaeIII GGCC 5 cut(s) 239, 569, 1220, 1391, 1554
HapII CCGG 1 cut(s) 665
HgaI GACGC 1 cut(s) 1377
HhaI GCGC 2 cut(s) 1458, 1479
Hin1II CATG 4 cut(s) 119, 1516, 1665, 1758
Hin6I GCGC 2 cut(s) 1456, 1477
HinP1I GCGC 2 cut(s) 1456, 1477
HincII GTYRAC 4 cut(s) 80, 1168, 1214, 1518
HindII GTYRAC 4 cut(s) 80, 1168, 1214, 1518
HindIII AAGCTT 2 cut(s) 1261, 1700
HpaII CCGG 1 cut(s) 665
HphI GGTGA 4 cut(s) 278, 311, 476, 1139
Hpy166II GTNNAC 4 cut(s) 80, 1168, 1214, 1518
Hpy8I GTNNAC 4 cut(s) 80, 1168, 1214, 1518
Hpy99I CGWCG 1 cut(s) 81
HpyCH4III ACNGT 4 cut(s) 35, 266, 1299, 1567
HpyCH4IV ACGT 1 cut(s) 1545
HpyF10VI GCNNNNNNNGC 4 cut(s) 575, 652, 862, 1358
HpyF3I CTNAG 5 cut(s) 858, 1353, 1362, 1410, 1692
HpySE526I ACGT 1 cut(s) 1545
Hsp92II CATG 4 cut(s) 119, 1516, 1665, 1758
HspAI GCGC 2 cut(s) 1456, 1477
Kpn2I TCCGGA 1 cut(s) 664
Ksp22I TGATCA 2 cut(s) 118, 154
Kzo9I GATC 4 cut(s) 118, 154, 342, 824
LguI GCTCTTC 1 cut(s) 698
LmnI GCTCC 2 cut(s) 382, 1333
Lsp1109I GCAGC 3 cut(s) 1345, 1348, 1492
LweI GCATC 5 cut(s) 184, 433, 1040, 1088, 1737
MaeI CTAG 6 cut(s) 360, 480, 639, 978, 1302, 1395
MaeII ACGT 1 cut(s) 1545
MaeIII GTNAC 2 cut(s) 550, 943
MalI GATC 4 cut(s) 120, 156, 344, 826
MbiI CCGCTC 1 cut(s) 708
MboI GATC 4 cut(s) 118, 154, 342, 824
MflI RGATCY 1 cut(s) 824
MhlI GDGCHC 2 cut(s) 1222, 1556
MlsI TGGCCA 1 cut(s) 239
MluI ACGCGT 1 cut(s) 554
MluNI TGGCCA 1 cut(s) 239
MlyI GAGTC 5 cut(s) 437, 983, 1163, 1192, 1604
Mox20I TGGCCA 1 cut(s) 239
Mph1103I ATGCAT 1 cut(s) 448
MroI TCCGGA 1 cut(s) 664
MroXI GAANNNNTTC 2 cut(s) 834, 997
MscI TGGCCA 1 cut(s) 239
MseI TTAA 7 cut(s) 225, 306, 531, 713, 1053, 1265, 1719
MslI CAYNNNNRTG 1 cut(s) 282
Msp20I TGGCCA 1 cut(s) 239
MspA1I CMGCKG 1 cut(s) 646
MspCI CTTAAG 2 cut(s) 1052, 1718
MspI CCGG 1 cut(s) 665
MspR9I CCNGG 4 cut(s) 241, 330, 1254, 1739
Mva1269I GAATGC 3 cut(s) 187, 578, 1380
MvaI CCWGG 4 cut(s) 241, 330, 1254, 1739
MvnI CGCG 3 cut(s) 556, 1458, 1639
MwoI GCNNNNNNNGC 4 cut(s) 575, 652, 862, 1358
NdeII GATC 4 cut(s) 118, 154, 342, 824
NlaIII CATG 4 cut(s) 119, 1516, 1665, 1758
NlaIV GGNNCC 4 cut(s) 855, 1220, 1554, 1656
NmuCI GTSAC 1 cut(s) 550
NsiI ATGCAT 1 cut(s) 448
NspI RCATGY 1 cut(s) 1516
PaqCI CACCTGC 1 cut(s) 1300
PciI ACATGT 1 cut(s) 1512
PciSI GCTCTTC 1 cut(s) 698
PcsI WCGNNNNNNNCGW 1 cut(s) 82
PctI GAATGC 3 cut(s) 187, 578, 1380
PdmI GAANNNNTTC 2 cut(s) 834, 997
PfeI GAWTC 7 cut(s) 92, 910, 1112, 1160, 1400, 1439, 1688
PfoI TCCNGGA 1 cut(s) 1737
PkrI GCNGC 6 cut(s) 648, 710, 1338, 1360, 1393, 1507
PleI GAGTC 5 cut(s) 436, 982, 1163, 1192, 1604
PpsI GAGTC 5 cut(s) 436, 982, 1163, 1192, 1604
Ppu21I YACGTR 1 cut(s) 1546
PscI ACATGT 1 cut(s) 1512
Psp6I CCWGG 4 cut(s) 239, 328, 1252, 1737
PspGI CCWGG 4 cut(s) 239, 328, 1252, 1737
PspN4I GGNNCC 4 cut(s) 855, 1220, 1554, 1656
PspOMI GGGCCC 2 cut(s) 1218, 1552
PspPI GGNCC 5 cut(s) 1218, 1219, 1552, 1553, 1655
PstI CTGCAG 2 cut(s) 952, 1625
PstNI CAGNNNCTG 2 cut(s) 1342, 1409
PsuI RGATCY 1 cut(s) 824
RsaI GTAC 5 cut(s) 478, 559, 589, 1666, 1676
RsaNI GTAC 5 cut(s) 477, 558, 588, 1665, 1675
RseI CAYNNNNRTG 1 cut(s) 282
SalI GTCGAC 1 cut(s) 78
SapI GCTCTTC 1 cut(s) 698
SaqAI TTAA 7 cut(s) 225, 306, 531, 713, 1053, 1265, 1719
SatI GCNGC 6 cut(s) 647, 709, 1337, 1359, 1392, 1506
Sau3AI GATC 4 cut(s) 118, 154, 342, 824
Sau96I GGNCC 5 cut(s) 1218, 1219, 1552, 1553, 1655
ScaI AGTACT 1 cut(s) 478
SchI GAGTC 5 cut(s) 437, 983, 1163, 1192, 1604
ScrFI CCNGG 4 cut(s) 241, 330, 1254, 1739
SduI GDGCHC 2 cut(s) 1222, 1556
SfaNI GCATC 5 cut(s) 184, 433, 1040, 1088, 1737
SfcI CTRYAG 4 cut(s) 255, 948, 1566, 1621
SinI GGWCC 1 cut(s) 1655
SmiMI CAYNNNNRTG 1 cut(s) 282
SmlI CTYRAG 5 cut(s) 169, 536, 929, 1052, 1718
SmoI CTYRAG 5 cut(s) 169, 536, 929, 1052, 1718
SsiI CCGC 8 cut(s) 381, 646, 708, 850, 1002, 1392, 1637, 1652
SspMI CTAG 6 cut(s) 360, 480, 639, 978, 1302, 1395
StyD4I CCNGG 4 cut(s) 239, 328, 1252, 1737
TaaI ACNGT 4 cut(s) 35, 266, 1299, 1567
TaiI ACGT 1 cut(s) 1548
TaqI TCGA 7 cut(s) 79, 85, 622, 740, 776, 938, 1064
TatI WGTACW 1 cut(s) 476
TauI GCSGC 3 cut(s) 649, 711, 1394
TfiI GAWTC 7 cut(s) 92, 910, 1112, 1160, 1400, 1439, 1688
Tru1I TTAA 7 cut(s) 225, 306, 531, 713, 1053, 1265, 1719
Tru9I TTAA 7 cut(s) 225, 306, 531, 713, 1053, 1265, 1719
TscAI CASTG 1 cut(s) 1096
TseFI GTSAC 1 cut(s) 550
TseI GCWGC 3 cut(s) 1336, 1358, 1505
Tsp45I GTSAC 1 cut(s) 550
TspDTI ATGAA 9 cut(s) 123, 243, 300, 422, 473, 909, 1104, 1122, 1236
TspGWI ACGGA 1 cut(s) 714
TspRI CASTG 1 cut(s) 1096
Vha464I CTTAAG 2 cut(s) 1052, 1718
VpaK11BI GGWCC 1 cut(s) 1655
XapI RAATTY 4 cut(s) 302, 670, 720, 881
XbaI TCTAGA 2 cut(s) 638, 1301
XceI RCATGY 1 cut(s) 1516
XmiI GTMKAC 1 cut(s) 79
XmnI GAANNNNTTC 2 cut(s) 834, 997
XspI CTAG 6 cut(s) 360, 480, 639, 978, 1302, 1395
ZrmI AGTACT 1 cut(s) 478
Zsp2I ATGCAT 1 cut(s) 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.