Rh7BG467600

PAPA-1-like conserved region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0012739
Physical Location & Seq
Forward (+)
55313623 .. 55316201
2579 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG467600.1

Sequence Viewer

Length: 1764 bp
ATGGAAGAGTTTAGTACTCCTAGATTGGATATCAGCAATGCTGTGAGAAAGAAAAGAAGTCAAACCTTTCGCCGACCTCGACCTGATTCACAACCATCACCTGAAATTCATGATCAGTCGCCGTTGTCATCACGTTCGGATGAACTGAGCAAGGTCTCCAGTGATGAGAATGCTGGTTGTGATACCAATTCTAAGCGGAAAGAATTGAGTCTTAATGAATGTATGACTAGAGTTTCTTCTGCTGGGGGTAATGGTGAAAAACCCCACATAAAAGATAGAAAGGATAGAGGGTTCAATTCATTTTACAATAATGAGCCGGGACGAAATGGGATCAGTAATAAACGCTCTAGCGAAGGTGTCCTTGCCCCTGCTAATTGGAAAAGCACAAGCACAGTGAGGGATGGTTTGATATCTGAGTCAAGAAGTGCAGGTGCAGCTAATGGTGGGCATGGTGGAAGTCCGAGTACTAGGCTGTCAGGATCAGATGGATTTGGAAATGAGAACAAGGTTAAAAAGGTCAAGCTCAAGGTTGGTGGTGCTACCCGGACAATTCAAGCCAATTCTGTAGTCAATGGTACAAAAGAGGAGGGGTCTTCAACAAAGTTATCTCGATCTTCAGATGTCTCTAAATCACGGCAGAAGCAAAATCTTCTGTCAAATTCAGATGAGAATCATTCCCCTTTAGATAGGAAGAGTGGTTTGAAAGGAATTCCATGGAAGGATTTCTCAAGAAGTGGTATTAATCTTGGGAAGGATCTGGATCAGTCTACAATGGTTCGGACATCCGGAAAGAACAGCTCTGGAAAGGAAGGAGATAGATCTGAACCTGTTCGTAAGAGCAAGCGTGTACCCAAGAGGCGTGTACTTGATGGAGAGTTTGGAGACGATGAGGAAGATGATGAGATTCGGTTTCTGGAGAAACTCAAAACATCTAAGGTTACTGGAGGATTTAGAGAAGAAGATGATGAAGAGTCAAGCAGGAAACATAGAAAACTTTCTGTAGTTTCTAGTATTGATAATGGTGGTCCATCAAGGTCAGGCAAAGACCTAAAGAGGAAGTCAAGACCTGATAGAGTATCAGGAGACGCTGATTATGAAGAAGAAGATTCATTATCTGATGGTGAGCTTGAAGGTAAAAAGAAGCAGAAGAAGGAAGCTGTTGAGCCTTTGTTAGATGGTAAGAGGGAATTGACCCTCACAACACGTCAACGGGCCCTTCAGTCGAGCAAAGATGCCTCTTCATCCCCTGGTTCAAGCTTAATTGAATTTCCGAATGGATTACCACCTGCACCACCTAGAAAACAAAAAGAGAAATCTACAGAATATGACCAGCAGGTGAAGAAAGCTGAGGCTGCTCAGAGACGAAGAATGCAAATTGAGAAGGCTGCTAGGGAATCTGAGGAGGAGGCTATTAGAAAAATACTTGGCCAAGATTCTAGTAGGAAAAAGAAGGAAGACAAAATAAAGAAGCGCCAAGAAGAACTGGCACAGGAGAAGGCTGCTAATGCTTTGGCGCTTGCATCAAGCACCATCAGATATGTGATGGGCCCAATGGGAACTACAGTAACATTCCCAGATGATATGGGTCTCCCCAGTTTATTTGACCCTAAACCTCACGGTTATCCTCCTCAGCGTGAGAAATGTGCGGGCCCATCATGTACGAATCCCTACAAGTATAGGGATTCTAAGTCAAAGCTTCCTCTTTGCAGTCTTGGGTGCTACAAGGCTGTCCAGGAAAAGACGCAAGCAGAAACTACCAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAPA-1 zf-HIT

Protein Analysis

587

Amino Acids

64.65

Weight (kDa)

9.5

Isoelectric Point (pI)

60.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAPA-1 PF04795 444 - 528 2.6e-20 PAPA-1-like conserved region
zf-HIT PF04438 544 - 575 3.6e-07 HIT zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012739)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G47350 AT2G47350
fragaria_vesca FvH4_5g39030
malus_domestica MD00G1140600.v1.1 MD03G1292700.v1.1
prunus_persica Prupe.8G265700_v2.0.a1
pyrus_communis pycom03g23200 pycom11g27340
rosa_chinensis RchiOBHm_Chr7g0241001
rosa_laevigata RLG00000000605
rosa_multiflora Rmu_sc0003187.1_g000010
rosa_roxburghii Rroxscaffold_3G00219330
rosa_rugosa Rorug07G0341200
rosa_samantha Rh7AG496300 Rh7BG467600 Rh7CG513600 Rh7DG480800
rosa_wichuraiana Rw7G041920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 419, 1294, 1324
Acc36I ACCTGC 3 cut(s) 419, 1294, 1324
AccI GTMKAC 1 cut(s) 767
AccIII TCCGGA 1 cut(s) 785
AciI CCGC 2 cut(s) 196, 1646
AclWI GGATC 4 cut(s) 338, 487, 762, 768
AcoI YGGCCR 1 cut(s) 1426
AcsI RAATTY 4 cut(s) 105, 658, 708, 1265
AcuI CTGAAG 2 cut(s) 600, 1202
AfaI GTAC 6 cut(s) 16, 466, 577, 849, 864, 1660
AflIII ACRYGT 1 cut(s) 1202
AgsI TTSAA 7 cut(s) 295, 554, 597, 703, 1130, 1254, 1265
AjiI CACGTC 1 cut(s) 1205
AjnI CCWGG 2 cut(s) 1246, 1731
AloI GAACNNNNNNTCC 2 cut(s) 275, 307
AluBI AGCT 9 cut(s) 437, 523, 798, 1126, 1157, 1257, 1346, 1696, 1761
AluI AGCT 9 cut(s) 437, 523, 798, 1126, 1157, 1257, 1346, 1696, 1761
Alw26I GTCTC 6 cut(s) 160, 628, 876, 1077, 1354, 1592
AlwI GGATC 4 cut(s) 338, 487, 762, 768
Aor13HI TCCGGA 1 cut(s) 785
AoxI GGCC 4 cut(s) 1212, 1426, 1546, 1648
ApaI GGGCCC 3 cut(s) 1216, 1550, 1652
ApeKI GCWGC 4 cut(s) 434, 1352, 1385, 1499
ApoI RAATTY 4 cut(s) 105, 658, 708, 1265
AseI ATTAAT 1 cut(s) 741
Asp700I GAANNNNTTC 3 cut(s) 722, 828, 994
AspLEI GCGC 2 cut(s) 1473, 1516
AspS9I GGNCC 7 cut(s) 1025, 1212, 1213, 1546, 1547, 1648, 1649
AsuC2I CCSGG 2 cut(s) 318, 544
AsuHPI GGTGA 4 cut(s) 90, 266, 1133, 1348
AvaII GGWCC 1 cut(s) 1025
BaeGI GKGCMC 3 cut(s) 1216, 1550, 1652
BalI TGGCCA 1 cut(s) 1428
BanII GRGCYC 3 cut(s) 1216, 1550, 1652
BarI GAAGNNNNNNTAC 2 cut(s) 448, 480
BbsI GAAGAC 2 cut(s) 585, 1461
BbvCI CCTCAGC 2 cut(s) 1347, 1629
BbvI GCAGC 4 cut(s) 446, 1339, 1372, 1486
BceAI ACGGC 2 cut(s) 106, 650
BciT130I CCWGG 2 cut(s) 1248, 1733
BclI TGATCA 1 cut(s) 112
BcnI CCSGG 2 cut(s) 318, 544
BcoDI GTCTC 6 cut(s) 160, 628, 876, 1077, 1354, 1592
BfaI CTAG 8 cut(s) 21, 228, 348, 468, 1008, 1296, 1389, 1437
BfmI CTRYAG 4 cut(s) 564, 999, 1317, 1560
BfoI RGCGCY 2 cut(s) 1474, 1517
BfuAI ACCTGC 3 cut(s) 419, 1294, 1324
BglII AGATCT 1 cut(s) 818
BisI GCNGC 4 cut(s) 435, 1353, 1386, 1500
BlsI GCNGC 4 cut(s) 436, 1354, 1387, 1501
BmcAI AGTACT 2 cut(s) 16, 466
Bme1390I CCNGG 4 cut(s) 318, 544, 1248, 1733
Bme18I GGWCC 1 cut(s) 1025
BmgBI CACGTC 1 cut(s) 1205
BmgT120I GGNCC 7 cut(s) 1025, 1212, 1213, 1546, 1547, 1648, 1649
BmiI GGNNCC 3 cut(s) 1214, 1548, 1650
BmrFI CCNGG 4 cut(s) 318, 544, 1248, 1733
BmrI ACTGGG 1 cut(s) 1587
BmsI GCATC 2 cut(s) 1222, 1529
BmuI ACTGGG 1 cut(s) 1587
BpiI GAAGAC 2 cut(s) 585, 1461
BpmI CTGGAG 3 cut(s) 142, 935, 963
Bpu10I CCTNAGC 2 cut(s) 1347, 1629
BpuEI CTTGAG 2 cut(s) 509, 712
BpuMI CCSGG 2 cut(s) 318, 544
BsaBI GATNNNNATC 2 cut(s) 669, 759
BsaI GGTCTC 2 cut(s) 160, 1592
BsaJI CCNNGG 2 cut(s) 713, 1246
BsaWI WCCGGW 1 cut(s) 785
Bse1I ACTGG 4 cut(s) 159, 946, 1488, 1593
Bse3DI GCAATG 1 cut(s) 43
Bse8I GATNNNNATC 2 cut(s) 669, 759
BseAI TCCGGA 1 cut(s) 785
BseBI CCWGG 2 cut(s) 1248, 1733
BseDI CCNNGG 2 cut(s) 713, 1246
BseGI GGATG 4 cut(s) 145, 406, 782, 1241
BseJI GATNNNNATC 2 cut(s) 669, 759
BseMI GCAATG 1 cut(s) 43
BseMII CTCAG 6 cut(s) 137, 405, 1338, 1370, 1389, 1643
BseNI ACTGG 4 cut(s) 159, 946, 1488, 1593
BseRI GAGGAG 4 cut(s) 599, 1415, 1418, 1617
BseSI GKGCMC 3 cut(s) 1216, 1550, 1652
BseXI GCAGC 4 cut(s) 446, 1339, 1372, 1486
BseYI CCCAGC 1 cut(s) 242
BsgI GTGCAG 3 cut(s) 447, 453, 1272
BshFI GGCC 4 cut(s) 1214, 1428, 1548, 1650
BsiSI CCGG 3 cut(s) 317, 544, 786
BslFI GGGAC 1 cut(s) 333
BsmAI GTCTC 6 cut(s) 160, 628, 876, 1077, 1354, 1592
BsmBI CGTCTC 3 cut(s) 876, 1077, 1354
BsmFI GGGAC 1 cut(s) 333
BsmI GAATGC 2 cut(s) 175, 1374
BsnI GGCC 4 cut(s) 1214, 1428, 1548, 1650
Bso31I GGTCTC 2 cut(s) 160, 1592
Bsp120I GGGCCC 3 cut(s) 1212, 1546, 1648
Bsp1286I GDGCHC 3 cut(s) 1216, 1550, 1652
Bsp13I TCCGGA 1 cut(s) 785
Bsp143I GATC 7 cut(s) 112, 330, 479, 611, 754, 760, 818
Bsp19I CCATGG 1 cut(s) 713
BspACI CCGC 2 cut(s) 196, 1646
BspANI GGCC 4 cut(s) 1214, 1428, 1548, 1650
BspCNI CTCAG 6 cut(s) 138, 406, 1339, 1369, 1390, 1642
BspEI TCCGGA 1 cut(s) 785
BspHI TCATGA 1 cut(s) 109
BspLI GGNNCC 3 cut(s) 1214, 1548, 1650
BspMI ACCTGC 3 cut(s) 419, 1294, 1324
BspPI GGATC 4 cut(s) 338, 487, 762, 768
BspTNI GGTCTC 2 cut(s) 160, 1592
BsrDI GCAATG 1 cut(s) 43
BsrI ACTGG 4 cut(s) 159, 946, 1488, 1593
BssECI CCNNGG 2 cut(s) 713, 1246
BssMI GATC 7 cut(s) 112, 330, 479, 611, 754, 760, 818
BssT1I CCWWGG 1 cut(s) 713
Bst2UI CCWGG 2 cut(s) 1248, 1733
Bst4CI ACNGT 3 cut(s) 394, 1564, 1619
Bst6I CTCTTC 3 cut(s) 686, 963, 1243
BstC8I GCNNGC 4 cut(s) 842, 1518, 1648, 1746
BstDEI CTNAG 9 cut(s) 146, 192, 414, 933, 1347, 1356, 1398, 1629, 1686
BstDSI CCRYGG 1 cut(s) 713
BstF5I GGATG 4 cut(s) 145, 406, 782, 1241
BstH2I RGCGCY 2 cut(s) 1474, 1517
BstHHI GCGC 2 cut(s) 1473, 1516
BstKTI GATC 7 cut(s) 115, 333, 482, 614, 757, 763, 821
BstMAI GTCTC 6 cut(s) 160, 628, 876, 1077, 1354, 1592
BstMBI GATC 7 cut(s) 112, 330, 479, 611, 754, 760, 818
BstMWI GCNNNNNNNGC 3 cut(s) 434, 1352, 1505
BstNI CCWGG 2 cut(s) 1248, 1733
BstSCI CCNGG 4 cut(s) 316, 542, 1246, 1731
BstSFI CTRYAG 4 cut(s) 564, 999, 1317, 1560
BstSLI GKGCMC 3 cut(s) 1216, 1550, 1652
BstV1I GCAGC 4 cut(s) 446, 1339, 1372, 1486
BstV2I GAAGAC 2 cut(s) 585, 1461
BstX2I RGATCY 2 cut(s) 754, 818
BstYI RGATCY 2 cut(s) 754, 818
BsuRI GGCC 4 cut(s) 1214, 1428, 1548, 1650
BtgI CCRYGG 1 cut(s) 713
BtrI CACGTC 1 cut(s) 1205
BtsCI GGATG 4 cut(s) 145, 406, 782, 1241
BtsIMutI CAGTG 2 cut(s) 166, 399
BveI ACCTGC 3 cut(s) 419, 1294, 1324
Cac8I GCNNGC 4 cut(s) 842, 1518, 1648, 1746
CciI TCATGA 1 cut(s) 109
CfoI GCGC 2 cut(s) 1473, 1516
Cfr13I GGNCC 7 cut(s) 1025, 1212, 1213, 1546, 1547, 1648, 1649
CseI GACGC 2 cut(s) 1094, 1750
Csp6I GTAC 6 cut(s) 15, 465, 576, 848, 863, 1659
CspCI CAANNNNNGTGG 2 cut(s) 514, 549
CviAII CATG 4 cut(s) 110, 449, 714, 1656
CviQI GTAC 6 cut(s) 15, 465, 576, 848, 863, 1659
DdeI CTNAG 9 cut(s) 146, 192, 414, 933, 1347, 1356, 1398, 1629, 1686
DpnI GATC 7 cut(s) 114, 332, 481, 613, 756, 762, 820
DpnII GATC 7 cut(s) 112, 330, 479, 611, 754, 760, 818
EaeI YGGCCR 1 cut(s) 1426
Eam1104I CTCTTC 3 cut(s) 686, 963, 1243
EarI CTCTTC 3 cut(s) 686, 963, 1243
Eco130I CCWWGG 1 cut(s) 713
Eco24I GRGCYC 3 cut(s) 1216, 1550, 1652
Eco31I GGTCTC 2 cut(s) 160, 1592
Eco32I GATATC 2 cut(s) 31, 411
Eco47I GGWCC 1 cut(s) 1025
Eco57I CTGAAG 2 cut(s) 600, 1202
EcoO109I RGGNCCY 1 cut(s) 1213
EcoRI GAATTC 1 cut(s) 708
EcoRII CCWGG 2 cut(s) 1246, 1731
EcoRV GATATC 2 cut(s) 31, 411
EcoT14I CCWWGG 1 cut(s) 713
EcoT38I GRGCYC 3 cut(s) 1216, 1550, 1652
ErhI CCWWGG 1 cut(s) 713
Esp3I CGTCTC 3 cut(s) 876, 1077, 1354
FaeI CATG 4 cut(s) 113, 452, 717, 1659
FalI AAGNNNNNCTT 2 cut(s) 345, 377
FaqI GGGAC 1 cut(s) 333
FatI CATG 4 cut(s) 109, 448, 713, 1655
FauI CCCGC 1 cut(s) 1639
FbaI TGATCA 1 cut(s) 112
FblI GTMKAC 1 cut(s) 767
Fnu4HI GCNGC 4 cut(s) 435, 1353, 1386, 1500
FokI GGATG 4 cut(s) 152, 413, 769, 1228
FriOI GRGCYC 3 cut(s) 1216, 1550, 1652
Fsp4HI GCNGC 4 cut(s) 435, 1353, 1386, 1500
FspBI CTAG 8 cut(s) 21, 228, 348, 468, 1008, 1296, 1389, 1437
GlaI GCGC 2 cut(s) 1472, 1515
GluI GCNGC 4 cut(s) 435, 1353, 1386, 1500
GsaI CCCAGC 1 cut(s) 246
GsuI CTGGAG 3 cut(s) 142, 935, 963
HaeII RGCGCY 2 cut(s) 1474, 1517
HaeIII GGCC 4 cut(s) 1214, 1428, 1548, 1650
HapII CCGG 3 cut(s) 317, 544, 786
HgaI GACGC 2 cut(s) 1094, 1750
HhaI GCGC 2 cut(s) 1473, 1516
Hin1II CATG 4 cut(s) 113, 452, 717, 1659
Hin6I GCGC 2 cut(s) 1471, 1514
HinP1I GCGC 2 cut(s) 1471, 1514
HincII GTYRAC 1 cut(s) 1208
HindII GTYRAC 1 cut(s) 1208
HindIII AAGCTT 2 cut(s) 1255, 1694
HpaII CCGG 3 cut(s) 317, 544, 786
HphI GGTGA 4 cut(s) 90, 266, 1133, 1348
Hpy166II GTNNAC 4 cut(s) 768, 848, 863, 1208
Hpy8I GTNNAC 4 cut(s) 768, 848, 863, 1208
HpyCH4III ACNGT 3 cut(s) 394, 1564, 1619
HpyCH4IV ACGT 2 cut(s) 133, 1204
HpyCH4V TGCA 6 cut(s) 428, 434, 1289, 1372, 1520, 1707
HpyF10VI GCNNNNNNNGC 3 cut(s) 434, 1352, 1505
HpyF3I CTNAG 9 cut(s) 146, 192, 414, 933, 1347, 1356, 1398, 1629, 1686
HpySE526I ACGT 2 cut(s) 133, 1204
Hsp92II CATG 4 cut(s) 113, 452, 717, 1659
HspAI GCGC 2 cut(s) 1471, 1514
Kpn2I TCCGGA 1 cut(s) 785
Ksp22I TGATCA 1 cut(s) 112
Kzo9I GATC 7 cut(s) 112, 330, 479, 611, 754, 760, 818
Lsp1109I GCAGC 4 cut(s) 446, 1339, 1372, 1486
LweI GCATC 2 cut(s) 1222, 1529
MaeI CTAG 8 cut(s) 21, 228, 348, 468, 1008, 1296, 1389, 1437
MaeII ACGT 2 cut(s) 133, 1204
MaeIII GTNAC 2 cut(s) 937, 1564
MalI GATC 7 cut(s) 114, 332, 481, 613, 756, 762, 820
MboI GATC 7 cut(s) 112, 330, 479, 611, 754, 760, 818
MflI RGATCY 2 cut(s) 754, 818
MhlI GDGCHC 3 cut(s) 1216, 1550, 1652
MlsI TGGCCA 1 cut(s) 1428
MluNI TGGCCA 1 cut(s) 1428
MlyI GAGTC 3 cut(s) 217, 425, 980
Mox20I TGGCCA 1 cut(s) 1428
MroI TCCGGA 1 cut(s) 785
MroXI GAANNNNTTC 3 cut(s) 722, 828, 994
MscI TGGCCA 1 cut(s) 1428
MseI TTAA 4 cut(s) 213, 510, 741, 1259
Msp20I TGGCCA 1 cut(s) 1428
MspI CCGG 3 cut(s) 317, 544, 786
MspR9I CCNGG 4 cut(s) 318, 544, 1248, 1733
Mva1269I GAATGC 2 cut(s) 175, 1374
MvaI CCWGG 2 cut(s) 1248, 1733
MwoI GCNNNNNNNGC 3 cut(s) 434, 1352, 1505
NciI CCSGG 2 cut(s) 318, 544
NcoI CCATGG 1 cut(s) 713
NdeII GATC 7 cut(s) 112, 330, 479, 611, 754, 760, 818
NlaIII CATG 4 cut(s) 113, 452, 717, 1659
NlaIV GGNNCC 3 cut(s) 1214, 1548, 1650
PagI TCATGA 1 cut(s) 109
PaqCI CACCTGC 3 cut(s) 419, 1294, 1324
PcsI WCGNNNNNNNCGW 1 cut(s) 76
PctI GAATGC 2 cut(s) 175, 1374
PdmI GAANNNNTTC 3 cut(s) 722, 828, 994
PfeI GAWTC 8 cut(s) 86, 670, 904, 1106, 1394, 1433, 1663, 1682
PfoI TCCNGGA 1 cut(s) 1731
PkrI GCNGC 4 cut(s) 436, 1354, 1387, 1501
PleI GAGTC 3 cut(s) 216, 424, 979
PpsI GAGTC 3 cut(s) 216, 424, 979
PshBI ATTAAT 1 cut(s) 741
Psp6I CCWGG 2 cut(s) 1246, 1731
PspFI CCCAGC 1 cut(s) 242
PspGI CCWGG 2 cut(s) 1246, 1731
PspN4I GGNNCC 3 cut(s) 1214, 1548, 1650
PspOMI GGGCCC 3 cut(s) 1212, 1546, 1648
PspPI GGNCC 7 cut(s) 1025, 1212, 1213, 1546, 1547, 1648, 1649
PsuI RGATCY 2 cut(s) 754, 818
RsaI GTAC 6 cut(s) 16, 466, 577, 849, 864, 1660
RsaNI GTAC 6 cut(s) 15, 465, 576, 848, 863, 1659
SaqAI TTAA 4 cut(s) 213, 510, 741, 1259
SatI GCNGC 4 cut(s) 435, 1353, 1386, 1500
Sau3AI GATC 7 cut(s) 112, 330, 479, 611, 754, 760, 818
Sau96I GGNCC 7 cut(s) 1025, 1212, 1213, 1546, 1547, 1648, 1649
ScaI AGTACT 2 cut(s) 16, 466
SchI GAGTC 3 cut(s) 217, 425, 980
ScrFI CCNGG 4 cut(s) 318, 544, 1248, 1733
SduI GDGCHC 3 cut(s) 1216, 1550, 1652
SfaNI GCATC 2 cut(s) 1222, 1529
SfcI CTRYAG 4 cut(s) 564, 999, 1317, 1560
SinI GGWCC 1 cut(s) 1025
SmlI CTYRAG 2 cut(s) 524, 727
SmoI CTYRAG 2 cut(s) 524, 727
SsiI CCGC 2 cut(s) 196, 1646
SspMI CTAG 8 cut(s) 21, 228, 348, 468, 1008, 1296, 1389, 1437
StyD4I CCNGG 4 cut(s) 316, 542, 1246, 1731
StyI CCWWGG 1 cut(s) 713
TaaI ACNGT 3 cut(s) 394, 1564, 1619
TaiI ACGT 2 cut(s) 136, 1207
TaqI TCGA 3 cut(s) 79, 610, 1223
TatI WGTACW 3 cut(s) 14, 464, 862
TfiI GAWTC 8 cut(s) 86, 670, 904, 1106, 1394, 1433, 1663, 1682
Tru1I TTAA 4 cut(s) 213, 510, 741, 1259
Tru9I TTAA 4 cut(s) 213, 510, 741, 1259
TscAI CASTG 2 cut(s) 166, 399
TseI GCWGC 4 cut(s) 434, 1352, 1385, 1499
TspDTI ATGAA 8 cut(s) 98, 156, 231, 288, 981, 1098, 1110, 1230
TspRI CASTG 2 cut(s) 166, 399
VpaK11BI GGWCC 1 cut(s) 1025
VspI ATTAAT 1 cut(s) 741
XapI RAATTY 4 cut(s) 105, 658, 708, 1265
XmiI GTMKAC 1 cut(s) 767
XmnI GAANNNNTTC 3 cut(s) 722, 828, 994
XspI CTAG 8 cut(s) 21, 228, 348, 468, 1008, 1296, 1389, 1437
ZrmI AGTACT 2 cut(s) 16, 466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.