Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0012739

Physical Location & Seq

Genomic Coordinates Forward (+)

68628230 .. 68630808

Gene Structure 2579 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG480800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGGAAGAGTTTAGTACTCCTAGATTGGATATCAGCAATGCTGTGAGAAAGAAAAGAAGTCAAACCTTTCGCCGACCTCGACCTGATTCACAACCATCACCTGAAATTCATGATCAGTCGCCGTTGTCATCACGTTCGGATGAACTGAGCAAGGTCTCCAGTGATGAGAATGCTGGTTGTGATACCAATTCTAAGCGGAAAGAATTGAGTCTTAATGAATGTATGGCTAGAGTTTCTTCTGCTGGGGGTAATGGTGAAAAACCCCACATAAAAGATAGGAAGGATAGAGGGTTCAATTCATTTTACAATAATGAGCCGGGACGAACTGGGATCAGTAATAAACGCTCTAGCGAAGGTGTCCTTGCCCCTGCTAATTGGAAAAGCGCAAGCACAGTGAAGGATGGTTTGATATCAGAGTCAAGAAGTGCAGGTGCAGCTAATGGTGGGCATGGTGGAAGTCCGAGTACTAGGTTGTCAGGATCAGATGGATTTGGAAATGAGAACAAGGTTAAAAAGGTCAAGCTCCAGGTTGGTAGTGCTACCCGGACAATTCAAGCCAATTCTGCAGTCAATGGTACAAAAGAGGAGGGGTCTTCAACAAAGTTATCTCGATCTTCAGATGTCTCTAAACTACGGCAGAAGCAAAATCTTCTGTCAAATTCAGATGAGAATCATTCCCCTTTAGATAGGAAGAGTGGTTTGAAAGGAATTCCATGGAAGGATTTCTCAAGAAGTGGTATTAATCTTGGGAAGGATCTGGATCAGTCTACAATGGTTCGGACATCCGGAAAGAACAGCTCTGGAAAGGAAGGAGATAGATCTGAACCAGTTCGTAAGAGCAAGCGTGTACCCAAGAGGCGTGTACTTGATGGAGAGTTTGGAGACGATGAGGAAGATGATGAGATTCGGTATCTGGAGAAACTCAAAACATCTAAGGTTACTGGAGGATTTAGAGAAGAAGATGATGAAGAGTCGAGCAGCAAACATAGAAAACTTTCTGTAGTTTCTAGTATTGATAATGGTGGTCCATCAAGGTCAGGCAAAGACCTAAAGAGGAAGTCAAGACCTGATAGAGTATCAGGAGATGCTGATTATGAAGAAGAAGATTCATTATCTGATGGTGAGCTTGAAGGTAAAAAGAAGCAGAAGAAGGAAGCTGTTGAGCCTTTGTTAGATGGTAAGAGGGAAATGACCCTCACAACACGTCAACGGGCCCTTCAGTCGAGCAAAGATGCCTCTTCATCCCCTGGTTCAAGCTTAATTGAATTTCCGAATGGATTACCACCTGCACCACCTAGAAAACAAAAAGAGAAATCTACAGAATATGACCAGCAGGTGAAGAAAGCTGAGGCTGCTCAGAGACGAAGAATGCAAATTGAGAAGGCTAATAGGGAATCTGAGGAGGAGGCTATTAGAAAAATACTTGGCCAAGATTCTAGTAGGAAAAAGAAGGAAGACAGAATAAAGAAGCGCCAAGAAGAACTGGCACAGGAGAAGGCTGCTAATGCTTTGGCGCTTGCATCAAGCACCATCAGATATGTGATGGGCCCAATGGGCACTACAGTAACATTCCCAGATGATATGGGTCTCCCCAGTTTATTTGACCCTAAACCTCACGGTTATCCTCCTCAGCGTGAGAAATGTGTGGGCCCATCATGTACGAATCCCTACAAGTATAGGGATTCTAAGTCAAAGCTTCCTCTTTGCAGTCTTGGGTGCTACAAGGCTGTCCAGGAAAAGACGCAAGCAGAAACTACCAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAPA-1 zf-HIT

Protein Analysis

587

Amino Acids

64.65

Weight (kDa)

9.44

Isoelectric Point (pI)

61.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAPA-1	PF04795	444 - 528	2.4e-20	PAPA-1-like conserved region
zf-HIT	PF04438	544 - 575	3.6e-07	HIT zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012739)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47350 AT2G47350
fragaria_vesca	FvH4_5g39030
malus_domestica	MD00G1140600.v1.1 MD03G1292700.v1.1
prunus_persica	Prupe.8G265700_v2.0.a1
pyrus_communis	pycom03g23200 pycom11g27340
rosa_chinensis	RchiOBHm_Chr7g0241001
rosa_laevigata	RLG00000000605
rosa_multiflora	Rmu_sc0003187.1_g000010
rosa_roxburghii	Rroxscaffold_3G00219330
rosa_rugosa	Rorug07G0341200
rosa_samantha	Rh7AG496300 Rh7BG467600 Rh7CG513600 Rh7DG480800
rosa_wichuraiana	Rw7G041920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	419, 1294, 1324
Acc36I	ACCTGC	3 cut(s)	419, 1294, 1324
AccI	GTMKAC	1 cut(s)	767
AccIII	TCCGGA	1 cut(s)	785
AciI	CCGC	1 cut(s)	196
AclWI	GGATC	4 cut(s)	338, 487, 762, 768
AcoI	YGGCCR	1 cut(s)	1426
AcsI	RAATTY	4 cut(s)	105, 658, 708, 1265
AcuI	CTGAAG	2 cut(s)	600, 1202
AfaI	GTAC	6 cut(s)	16, 466, 577, 849, 864, 1660
AflIII	ACRYGT	1 cut(s)	1202
AgsI	TTSAA	7 cut(s)	295, 554, 597, 703, 1130, 1254, 1265
AjiI	CACGTC	1 cut(s)	1205
AjnI	CCWGG	3 cut(s)	525, 1246, 1731
AloI	GAACNNNNNNTCC	2 cut(s)	275, 307
AluBI	AGCT	9 cut(s)	437, 523, 798, 1126, 1157, 1257, 1346, 1696, 1761
AluI	AGCT	9 cut(s)	437, 523, 798, 1126, 1157, 1257, 1346, 1696, 1761
Alw26I	GTCTC	5 cut(s)	160, 628, 876, 1354, 1592
AlwI	GGATC	4 cut(s)	338, 487, 762, 768
Aor13HI	TCCGGA	1 cut(s)	785
AoxI	GGCC	4 cut(s)	1212, 1426, 1546, 1648
ApaI	GGGCCC	3 cut(s)	1216, 1550, 1652
ApeKI	GCWGC	4 cut(s)	434, 978, 1352, 1499
ApoI	RAATTY	4 cut(s)	105, 658, 708, 1265
AseI	ATTAAT	1 cut(s)	741
Asp700I	GAANNNNTTC	3 cut(s)	722, 828, 994
AspLEI	GCGC	3 cut(s)	386, 1473, 1516
AspS9I	GGNCC	7 cut(s)	1025, 1212, 1213, 1546, 1547, 1648, 1649
AsuC2I	CCSGG	2 cut(s)	318, 544
AsuHPI	GGTGA	4 cut(s)	90, 266, 1133, 1348
AvaII	GGWCC	1 cut(s)	1025
BaeGI	GKGCMC	4 cut(s)	1216, 1550, 1559, 1652
BalI	TGGCCA	1 cut(s)	1428
BanII	GRGCYC	3 cut(s)	1216, 1550, 1652
BarI	GAAGNNNNNNTAC	2 cut(s)	448, 480
BbsI	GAAGAC	2 cut(s)	585, 1461
BbvCI	CCTCAGC	2 cut(s)	1347, 1629
BbvI	GCAGC	4 cut(s)	446, 990, 1339, 1486
BceAI	ACGGC	2 cut(s)	106, 650
BciT130I	CCWGG	3 cut(s)	527, 1248, 1733
BclI	TGATCA	1 cut(s)	112
BcnI	CCSGG	2 cut(s)	318, 544
BcoDI	GTCTC	5 cut(s)	160, 628, 876, 1354, 1592
BfaI	CTAG	7 cut(s)	21, 228, 348, 468, 1008, 1296, 1437
BfmI	CTRYAG	4 cut(s)	564, 999, 1317, 1560
BfoI	RGCGCY	2 cut(s)	1474, 1517
BfuAI	ACCTGC	3 cut(s)	419, 1294, 1324
BglI	GCCNNNNNGGC	1 cut(s)	1554
BglII	AGATCT	1 cut(s)	818
BisI	GCNGC	4 cut(s)	435, 979, 1353, 1500
BlsI	GCNGC	4 cut(s)	436, 980, 1354, 1501
BmcAI	AGTACT	2 cut(s)	16, 466
Bme1390I	CCNGG	5 cut(s)	318, 527, 544, 1248, 1733
Bme18I	GGWCC	1 cut(s)	1025
BmgBI	CACGTC	1 cut(s)	1205
BmgT120I	GGNCC	7 cut(s)	1025, 1212, 1213, 1546, 1547, 1648, 1649
BmiI	GGNNCC	3 cut(s)	1214, 1548, 1650
BmrFI	CCNGG	5 cut(s)	318, 527, 544, 1248, 1733
BmrI	ACTGGG	2 cut(s)	336, 1587
BmsI	GCATC	3 cut(s)	1075, 1222, 1529
BmuI	ACTGGG	2 cut(s)	336, 1587
BpiI	GAAGAC	2 cut(s)	585, 1461
BpmI	CTGGAG	4 cut(s)	142, 509, 935, 963
Bpu10I	CCTNAGC	2 cut(s)	1347, 1629
BpuEI	CTTGAG	1 cut(s)	712
BpuMI	CCSGG	2 cut(s)	318, 544
BsaBI	GATNNNNATC	2 cut(s)	669, 759
BsaI	GGTCTC	2 cut(s)	160, 1592
BsaJI	CCNNGG	2 cut(s)	713, 1246
BsaWI	WCCGGW	1 cut(s)	785
Bse1I	ACTGG	6 cut(s)	159, 331, 827, 946, 1488, 1593
Bse3DI	GCAATG	1 cut(s)	43
Bse8I	GATNNNNATC	2 cut(s)	669, 759
BseAI	TCCGGA	1 cut(s)	785
BseBI	CCWGG	3 cut(s)	527, 1248, 1733
BseDI	CCNNGG	2 cut(s)	713, 1246
BseGI	GGATG	4 cut(s)	145, 406, 782, 1241
BseJI	GATNNNNATC	2 cut(s)	669, 759
BseMI	GCAATG	1 cut(s)	43
BseMII	CTCAG	5 cut(s)	137, 1338, 1370, 1389, 1643
BseNI	ACTGG	6 cut(s)	159, 331, 827, 946, 1488, 1593
BseRI	GAGGAG	4 cut(s)	599, 1415, 1418, 1617
BseSI	GKGCMC	4 cut(s)	1216, 1550, 1559, 1652
BseXI	GCAGC	4 cut(s)	446, 990, 1339, 1486
BseYI	CCCAGC	1 cut(s)	242
BsgI	GTGCAG	3 cut(s)	447, 453, 1272
BshFI	GGCC	4 cut(s)	1214, 1428, 1548, 1650
BsiSI	CCGG	3 cut(s)	317, 544, 786
BslFI	GGGAC	1 cut(s)	333
BsmAI	GTCTC	5 cut(s)	160, 628, 876, 1354, 1592
BsmBI	CGTCTC	2 cut(s)	876, 1354
BsmFI	GGGAC	1 cut(s)	333
BsmI	GAATGC	2 cut(s)	175, 1374
BsnI	GGCC	4 cut(s)	1214, 1428, 1548, 1650
Bso31I	GGTCTC	2 cut(s)	160, 1592
Bsp120I	GGGCCC	3 cut(s)	1212, 1546, 1648
Bsp1286I	GDGCHC	4 cut(s)	1216, 1550, 1559, 1652
Bsp13I	TCCGGA	1 cut(s)	785
Bsp143I	GATC	7 cut(s)	112, 330, 479, 611, 754, 760, 818
Bsp19I	CCATGG	1 cut(s)	713
BspACI	CCGC	1 cut(s)	196
BspANI	GGCC	4 cut(s)	1214, 1428, 1548, 1650
BspCNI	CTCAG	5 cut(s)	138, 1339, 1369, 1390, 1642
BspEI	TCCGGA	1 cut(s)	785
BspHI	TCATGA	1 cut(s)	109
BspLI	GGNNCC	3 cut(s)	1214, 1548, 1650
BspMAI	CTGCAG	1 cut(s)	568
BspMI	ACCTGC	3 cut(s)	419, 1294, 1324
BspPI	GGATC	4 cut(s)	338, 487, 762, 768
BspTNI	GGTCTC	2 cut(s)	160, 1592
BsrDI	GCAATG	1 cut(s)	43
BsrI	ACTGG	6 cut(s)	159, 331, 827, 946, 1488, 1593
BssECI	CCNNGG	2 cut(s)	713, 1246
BssMI	GATC	7 cut(s)	112, 330, 479, 611, 754, 760, 818
BssT1I	CCWWGG	1 cut(s)	713
Bst2UI	CCWGG	3 cut(s)	527, 1248, 1733
Bst4CI	ACNGT	3 cut(s)	394, 1564, 1619
Bst6I	CTCTTC	3 cut(s)	686, 963, 1243
BstC8I	GCNNGC	4 cut(s)	388, 842, 1518, 1746
BstDEI	CTNAG	8 cut(s)	146, 192, 933, 1347, 1356, 1398, 1629, 1686
BstDSI	CCRYGG	1 cut(s)	713
BstF5I	GGATG	4 cut(s)	145, 406, 782, 1241
BstH2I	RGCGCY	2 cut(s)	1474, 1517
BstHHI	GCGC	3 cut(s)	386, 1473, 1516
BstKTI	GATC	7 cut(s)	115, 333, 482, 614, 757, 763, 821
BstMAI	GTCTC	5 cut(s)	160, 628, 876, 1354, 1592
BstMBI	GATC	7 cut(s)	112, 330, 479, 611, 754, 760, 818
BstMWI	GCNNNNNNNGC	5 cut(s)	434, 563, 1352, 1505, 1554
BstNI	CCWGG	3 cut(s)	527, 1248, 1733
BstSCI	CCNGG	5 cut(s)	316, 525, 542, 1246, 1731
BstSFI	CTRYAG	4 cut(s)	564, 999, 1317, 1560
BstSLI	GKGCMC	4 cut(s)	1216, 1550, 1559, 1652
BstV1I	GCAGC	4 cut(s)	446, 990, 1339, 1486
BstV2I	GAAGAC	2 cut(s)	585, 1461
BstX2I	RGATCY	2 cut(s)	754, 818
BstYI	RGATCY	2 cut(s)	754, 818
BsuRI	GGCC	4 cut(s)	1214, 1428, 1548, 1650
BtgI	CCRYGG	1 cut(s)	713
BtrI	CACGTC	1 cut(s)	1205
BtsCI	GGATG	4 cut(s)	145, 406, 782, 1241
BtsIMutI	CAGTG	2 cut(s)	166, 399
BveI	ACCTGC	3 cut(s)	419, 1294, 1324
Cac8I	GCNNGC	4 cut(s)	388, 842, 1518, 1746
CciI	TCATGA	1 cut(s)	109
CfoI	GCGC	3 cut(s)	386, 1473, 1516
Cfr13I	GGNCC	7 cut(s)	1025, 1212, 1213, 1546, 1547, 1648, 1649
CseI	GACGC	1 cut(s)	1750
Csp6I	GTAC	6 cut(s)	15, 465, 576, 848, 863, 1659
CviAII	CATG	4 cut(s)	110, 449, 714, 1656
CviQI	GTAC	6 cut(s)	15, 465, 576, 848, 863, 1659
DdeI	CTNAG	8 cut(s)	146, 192, 933, 1347, 1356, 1398, 1629, 1686
DpnI	GATC	7 cut(s)	114, 332, 481, 613, 756, 762, 820
DpnII	GATC	7 cut(s)	112, 330, 479, 611, 754, 760, 818
EaeI	YGGCCR	1 cut(s)	1426
Eam1104I	CTCTTC	3 cut(s)	686, 963, 1243
EarI	CTCTTC	3 cut(s)	686, 963, 1243
Eco130I	CCWWGG	1 cut(s)	713
Eco24I	GRGCYC	3 cut(s)	1216, 1550, 1652
Eco31I	GGTCTC	2 cut(s)	160, 1592
Eco32I	GATATC	2 cut(s)	31, 411
Eco47I	GGWCC	1 cut(s)	1025
Eco57I	CTGAAG	2 cut(s)	600, 1202
EcoO109I	RGGNCCY	1 cut(s)	1213
EcoRI	GAATTC	1 cut(s)	708
EcoRII	CCWGG	3 cut(s)	525, 1246, 1731
EcoRV	GATATC	2 cut(s)	31, 411
EcoT14I	CCWWGG	1 cut(s)	713
EcoT38I	GRGCYC	3 cut(s)	1216, 1550, 1652
ErhI	CCWWGG	1 cut(s)	713
Esp3I	CGTCTC	2 cut(s)	876, 1354
FaeI	CATG	4 cut(s)	113, 452, 717, 1659
FalI	AAGNNNNNCTT	2 cut(s)	345, 377
FaqI	GGGAC	1 cut(s)	333
FatI	CATG	4 cut(s)	109, 448, 713, 1655
FbaI	TGATCA	1 cut(s)	112
FblI	GTMKAC	1 cut(s)	767
Fnu4HI	GCNGC	4 cut(s)	435, 979, 1353, 1500
FokI	GGATG	4 cut(s)	152, 413, 769, 1228
FriOI	GRGCYC	3 cut(s)	1216, 1550, 1652
Fsp4HI	GCNGC	4 cut(s)	435, 979, 1353, 1500
FspBI	CTAG	7 cut(s)	21, 228, 348, 468, 1008, 1296, 1437
GlaI	GCGC	3 cut(s)	385, 1472, 1515
GluI	GCNGC	4 cut(s)	435, 979, 1353, 1500
GsaI	CCCAGC	1 cut(s)	246
GsuI	CTGGAG	4 cut(s)	142, 509, 935, 963
HaeII	RGCGCY	2 cut(s)	1474, 1517
HaeIII	GGCC	4 cut(s)	1214, 1428, 1548, 1650
HapII	CCGG	3 cut(s)	317, 544, 786
HgaI	GACGC	1 cut(s)	1750
HhaI	GCGC	3 cut(s)	386, 1473, 1516
Hin1II	CATG	4 cut(s)	113, 452, 717, 1659
Hin6I	GCGC	3 cut(s)	384, 1471, 1514
HinP1I	GCGC	3 cut(s)	384, 1471, 1514
HincII	GTYRAC	1 cut(s)	1208
HindII	GTYRAC	1 cut(s)	1208
HindIII	AAGCTT	2 cut(s)	1255, 1694
HpaII	CCGG	3 cut(s)	317, 544, 786
HphI	GGTGA	4 cut(s)	90, 266, 1133, 1348
Hpy166II	GTNNAC	4 cut(s)	768, 848, 863, 1208
Hpy8I	GTNNAC	4 cut(s)	768, 848, 863, 1208
HpyCH4III	ACNGT	3 cut(s)	394, 1564, 1619
HpyCH4IV	ACGT	2 cut(s)	133, 1204
HpyCH4V	TGCA	7 cut(s)	428, 434, 566, 1289, 1372, 1520, 1707
HpyF10VI	GCNNNNNNNGC	5 cut(s)	434, 563, 1352, 1505, 1554
HpyF3I	CTNAG	8 cut(s)	146, 192, 933, 1347, 1356, 1398, 1629, 1686
HpySE526I	ACGT	2 cut(s)	133, 1204
Hsp92II	CATG	4 cut(s)	113, 452, 717, 1659
HspAI	GCGC	3 cut(s)	384, 1471, 1514
Kpn2I	TCCGGA	1 cut(s)	785
Ksp22I	TGATCA	1 cut(s)	112
Kzo9I	GATC	7 cut(s)	112, 330, 479, 611, 754, 760, 818
LmnI	GCTCC	1 cut(s)	528
Lsp1109I	GCAGC	4 cut(s)	446, 990, 1339, 1486
LweI	GCATC	3 cut(s)	1075, 1222, 1529
MaeI	CTAG	7 cut(s)	21, 228, 348, 468, 1008, 1296, 1437
MaeII	ACGT	2 cut(s)	133, 1204
MaeIII	GTNAC	2 cut(s)	937, 1564
MalI	GATC	7 cut(s)	114, 332, 481, 613, 756, 762, 820
MboI	GATC	7 cut(s)	112, 330, 479, 611, 754, 760, 818
MflI	RGATCY	2 cut(s)	754, 818
MhlI	GDGCHC	4 cut(s)	1216, 1550, 1559, 1652
MlsI	TGGCCA	1 cut(s)	1428
MluNI	TGGCCA	1 cut(s)	1428
MlyI	GAGTC	3 cut(s)	217, 425, 980
Mox20I	TGGCCA	1 cut(s)	1428
MroI	TCCGGA	1 cut(s)	785
MroXI	GAANNNNTTC	3 cut(s)	722, 828, 994
MscI	TGGCCA	1 cut(s)	1428
MseI	TTAA	4 cut(s)	213, 510, 741, 1259
Msp20I	TGGCCA	1 cut(s)	1428
MspI	CCGG	3 cut(s)	317, 544, 786
MspR9I	CCNGG	5 cut(s)	318, 527, 544, 1248, 1733
Mva1269I	GAATGC	2 cut(s)	175, 1374
MvaI	CCWGG	3 cut(s)	527, 1248, 1733
MwoI	GCNNNNNNNGC	5 cut(s)	434, 563, 1352, 1505, 1554
NciI	CCSGG	2 cut(s)	318, 544
NcoI	CCATGG	1 cut(s)	713
NdeII	GATC	7 cut(s)	112, 330, 479, 611, 754, 760, 818
NlaIII	CATG	4 cut(s)	113, 452, 717, 1659
NlaIV	GGNNCC	3 cut(s)	1214, 1548, 1650
PagI	TCATGA	1 cut(s)	109
PaqCI	CACCTGC	3 cut(s)	419, 1294, 1324
PcsI	WCGNNNNNNNCGW	1 cut(s)	76
PctI	GAATGC	2 cut(s)	175, 1374
PdmI	GAANNNNTTC	3 cut(s)	722, 828, 994
PfeI	GAWTC	8 cut(s)	86, 670, 904, 1106, 1394, 1433, 1663, 1682
PfoI	TCCNGGA	1 cut(s)	1731
PkrI	GCNGC	4 cut(s)	436, 980, 1354, 1501
PleI	GAGTC	3 cut(s)	216, 424, 979
PpsI	GAGTC	3 cut(s)	216, 424, 979
PshBI	ATTAAT	1 cut(s)	741
Psp6I	CCWGG	3 cut(s)	525, 1246, 1731
PspFI	CCCAGC	1 cut(s)	242
PspGI	CCWGG	3 cut(s)	525, 1246, 1731
PspN4I	GGNNCC	3 cut(s)	1214, 1548, 1650
PspOMI	GGGCCC	3 cut(s)	1212, 1546, 1648
PspPI	GGNCC	7 cut(s)	1025, 1212, 1213, 1546, 1547, 1648, 1649
PstI	CTGCAG	1 cut(s)	568
PsuI	RGATCY	2 cut(s)	754, 818
RsaI	GTAC	6 cut(s)	16, 466, 577, 849, 864, 1660
RsaNI	GTAC	6 cut(s)	15, 465, 576, 848, 863, 1659
SaqAI	TTAA	4 cut(s)	213, 510, 741, 1259
SatI	GCNGC	4 cut(s)	435, 979, 1353, 1500
Sau3AI	GATC	7 cut(s)	112, 330, 479, 611, 754, 760, 818
Sau96I	GGNCC	7 cut(s)	1025, 1212, 1213, 1546, 1547, 1648, 1649
ScaI	AGTACT	2 cut(s)	16, 466
SchI	GAGTC	3 cut(s)	217, 425, 980
ScrFI	CCNGG	5 cut(s)	318, 527, 544, 1248, 1733
SduI	GDGCHC	4 cut(s)	1216, 1550, 1559, 1652
SfaNI	GCATC	3 cut(s)	1075, 1222, 1529
SfcI	CTRYAG	4 cut(s)	564, 999, 1317, 1560
SinI	GGWCC	1 cut(s)	1025
SmlI	CTYRAG	1 cut(s)	727
SmoI	CTYRAG	1 cut(s)	727
SsiI	CCGC	1 cut(s)	196
SspMI	CTAG	7 cut(s)	21, 228, 348, 468, 1008, 1296, 1437
StyD4I	CCNGG	5 cut(s)	316, 525, 542, 1246, 1731
StyI	CCWWGG	1 cut(s)	713
TaaI	ACNGT	3 cut(s)	394, 1564, 1619
TaiI	ACGT	2 cut(s)	136, 1207
TaqI	TCGA	4 cut(s)	79, 610, 974, 1223
TatI	WGTACW	3 cut(s)	14, 464, 862
TfiI	GAWTC	8 cut(s)	86, 670, 904, 1106, 1394, 1433, 1663, 1682
Tru1I	TTAA	4 cut(s)	213, 510, 741, 1259
Tru9I	TTAA	4 cut(s)	213, 510, 741, 1259
TscAI	CASTG	2 cut(s)	166, 399
TseI	GCWGC	4 cut(s)	434, 978, 1352, 1499
TspDTI	ATGAA	8 cut(s)	98, 156, 231, 288, 981, 1098, 1110, 1230
TspRI	CASTG	2 cut(s)	166, 399
VpaK11BI	GGWCC	1 cut(s)	1025
VspI	ATTAAT	1 cut(s)	741
XapI	RAATTY	4 cut(s)	105, 658, 708, 1265
XmiI	GTMKAC	1 cut(s)	767
XmnI	GAANNNNTTC	3 cut(s)	722, 828, 994
XspI	CTAG	7 cut(s)	21, 228, 348, 468, 1008, 1296, 1437
ZrmI	AGTACT	2 cut(s)	16, 466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.