Protein trichome birefringence-like 3
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G01360 AT5G01360 |
| fragaria_vesca | FvH4_6g11230 FvH4_6g11230 |
| malus_domestica | MD00G1172500.v1.1 MD12G1171500.v1.1 |
| prunus_persica | Prupe.6G279700_v2.0.a1 |
| pyrus_communis | pycom04g14210 pycom12g16280 |
| rosa_chinensis | RchiOBHm_Chr3g0462741 |
| rosa_laevigata | RLG00000024836 |
| rosa_multiflora | Rmu_sc0000766.1_g000003 Rmu_sc0011057.1_g000007 |
| rosa_roxburghii | Rroxscaffold_6G00417240 |
| rosa_rugosa | Rorug03G0058900 |
| rosa_samantha | Rh3DG122300 |
| rosa_wichuraiana | Rw3G009900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1058 |
| AatII | GACGTC | 1 cut(s) | 376 |
| AccB1I | GGYRCC | 2 cut(s) | 634, 1242 |
| AccBSI | CCGCTC | 1 cut(s) | 783 |
| AccI | GTMKAC | 2 cut(s) | 897, 1234 |
| AccII | CGCG | 2 cut(s) | 29, 1068 |
| AccIII | TCCGGA | 1 cut(s) | 376 |
| AciI | CCGC | 3 cut(s) | 577, 783, 1087 |
| AclWI | GGATC | 2 cut(s) | 431, 817 |
| AcsI | RAATTY | 2 cut(s) | 623, 1275 |
| AcuI | CTGAAG | 1 cut(s) | 577 |
| AcyI | GRCGYC | 2 cut(s) | 373, 635 |
| AfaI | GTAC | 3 cut(s) | 421, 1019, 1113 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 383 |
| AflII | CTTAAG | 1 cut(s) | 452 |
| AgeI | ACCGGT | 1 cut(s) | 853 |
| AgsI | TTSAA | 9 cut(s) | 148, 253, 295, 413, 569, 623, 760, 877, 1003 |
| AjnI | CCWGG | 1 cut(s) | 1249 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 128, 160, 549, 581 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 545, 577 |
| AluBI | AGCT | 2 cut(s) | 6, 52 |
| AluI | AGCT | 2 cut(s) | 6, 52 |
| Alw26I | GTCTC | 3 cut(s) | 101, 466, 585 |
| AlwI | GGATC | 2 cut(s) | 431, 817 |
| Ama87I | CYCGRG | 2 cut(s) | 257, 548 |
| Aor13HI | TCCGGA | 1 cut(s) | 376 |
| ApeKI | GCWGC | 1 cut(s) | 1216 |
| ApoI | RAATTY | 2 cut(s) | 623, 1275 |
| AsiGI | ACCGGT | 1 cut(s) | 853 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 998, 1045 |
| AspLEI | GCGC | 4 cut(s) | 29, 80, 637, 1068 |
| AsuHPI | GGTGA | 1 cut(s) | 836 |
| AvaI | CYCGRG | 2 cut(s) | 257, 548 |
| BanI | GGYRCC | 2 cut(s) | 634, 1242 |
| BauI | CACGAG | 1 cut(s) | 924 |
| BbsI | GAAGAC | 2 cut(s) | 583, 884 |
| BbvI | GCAGC | 1 cut(s) | 1203 |
| BccI | CCATC | 2 cut(s) | 548, 980 |
| BceAI | ACGGC | 1 cut(s) | 1000 |
| BciT130I | CCWGG | 1 cut(s) | 1251 |
| BcoDI | GTCTC | 3 cut(s) | 101, 466, 585 |
| BfaI | CTAG | 1 cut(s) | 117 |
| BfmI | CTRYAG | 1 cut(s) | 862 |
| BfoI | RGCGCY | 1 cut(s) | 638 |
| BfrI | CTTAAG | 1 cut(s) | 452 |
| BisI | GCNGC | 2 cut(s) | 784, 1217 |
| BlsI | GCNGC | 2 cut(s) | 785, 1218 |
| BmcAI | AGTACT | 1 cut(s) | 1113 |
| Bme1390I | CCNGG | 1 cut(s) | 1251 |
| BmeT110I | CYCGRG | 2 cut(s) | 257, 548 |
| BmiI | GGNNCC | 2 cut(s) | 636, 1244 |
| BmrFI | CCNGG | 1 cut(s) | 1251 |
| BmrI | ACTGGG | 4 cut(s) | 640, 814, 901, 982 |
| BmsI | GCATC | 4 cut(s) | 29, 129, 838, 1138 |
| BmuI | ACTGGG | 4 cut(s) | 640, 814, 901, 982 |
| BpiI | GAAGAC | 2 cut(s) | 583, 884 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 27 |
| BpmI | CTGGAG | 1 cut(s) | 1272 |
| BsaHI | GRCGYC | 2 cut(s) | 373, 635 |
| BsaI | GGTCTC | 1 cut(s) | 585 |
| BsaJI | CCNNGG | 4 cut(s) | 207, 258, 600, 683 |
| BsaWI | WCCGGW | 4 cut(s) | 376, 853, 1102, 1175 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 273, 303 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 383 |
| Bse118I | RCCGGY | 1 cut(s) | 853 |
| Bse1I | ACTGG | 6 cut(s) | 401, 635, 737, 809, 896, 977 |
| Bse3DI | GCAATG | 2 cut(s) | 407, 422 |
| BseAI | TCCGGA | 1 cut(s) | 376 |
| BseBI | CCWGG | 1 cut(s) | 1251 |
| BseDI | CCNNGG | 4 cut(s) | 207, 258, 600, 683 |
| BseGI | GGATG | 3 cut(s) | 783, 853, 996 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 383 |
| BseMI | GCAATG | 2 cut(s) | 407, 422 |
| BseMII | CTCAG | 2 cut(s) | 333, 475 |
| BseNI | ACTGG | 6 cut(s) | 401, 635, 737, 809, 896, 977 |
| BseRI | GAGGAG | 2 cut(s) | 89, 275 |
| BseXI | GCAGC | 1 cut(s) | 1203 |
| BsgI | GTGCAG | 3 cut(s) | 286, 987, 1202 |
| Bsh1236I | CGCG | 2 cut(s) | 29, 1068 |
| BshNI | GGYRCC | 2 cut(s) | 634, 1242 |
| BshTI | ACCGGT | 1 cut(s) | 853 |
| BsiHKCI | CYCGRG | 2 cut(s) | 257, 548 |
| BsiSI | CCGG | 4 cut(s) | 377, 854, 1103, 1176 |
| BslFI | GGGAC | 1 cut(s) | 931 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 383 |
| BsmAI | GTCTC | 3 cut(s) | 101, 466, 585 |
| BsmFI | GGGAC | 1 cut(s) | 931 |
| Bso31I | GGTCTC | 1 cut(s) | 585 |
| BsoBI | CYCGRG | 2 cut(s) | 257, 548 |
| Bsp13I | TCCGGA | 1 cut(s) | 376 |
| Bsp1407I | TGTACA | 1 cut(s) | 419 |
| Bsp143I | GATC | 4 cut(s) | 303, 436, 792, 809 |
| BspACI | CCGC | 3 cut(s) | 577, 783, 1087 |
| BspCNI | CTCAG | 2 cut(s) | 332, 474 |
| BspEI | TCCGGA | 1 cut(s) | 376 |
| BspFNI | CGCG | 2 cut(s) | 29, 1068 |
| BspLI | GGNNCC | 2 cut(s) | 636, 1244 |
| BspPI | GGATC | 2 cut(s) | 431, 817 |
| BspT107I | GGYRCC | 2 cut(s) | 634, 1242 |
| BspTI | CTTAAG | 1 cut(s) | 452 |
| BspTNI | GGTCTC | 1 cut(s) | 585 |
| BsrBI | CCGCTC | 1 cut(s) | 783 |
| BsrDI | GCAATG | 2 cut(s) | 407, 422 |
| BsrFI | RCCGGY | 1 cut(s) | 853 |
| BsrGI | TGTACA | 1 cut(s) | 419 |
| BsrI | ACTGG | 6 cut(s) | 401, 635, 737, 809, 896, 977 |
| BssAI | RCCGGY | 1 cut(s) | 853 |
| BssECI | CCNNGG | 4 cut(s) | 207, 258, 600, 683 |
| BssMI | GATC | 4 cut(s) | 303, 436, 792, 809 |
| BssNAI | GTATAC | 1 cut(s) | 1235 |
| BssNI | GRCGYC | 2 cut(s) | 373, 635 |
| BssSI | CACGAG | 1 cut(s) | 924 |
| BssT1I | CCWWGG | 2 cut(s) | 600, 683 |
| Bst1107I | GTATAC | 1 cut(s) | 1235 |
| Bst2BI | CACGAG | 1 cut(s) | 924 |
| Bst2UI | CCWGG | 1 cut(s) | 1251 |
| Bst4CI | ACNGT | 2 cut(s) | 299, 589 |
| BstACI | GRCGYC | 2 cut(s) | 373, 635 |
| BstAFI | CTTAAG | 1 cut(s) | 452 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 857 |
| BstAUI | TGTACA | 1 cut(s) | 419 |
| BstC8I | GCNNGC | 1 cut(s) | 723 |
| BstDEI | CTNAG | 2 cut(s) | 319, 461 |
| BstF5I | GGATG | 3 cut(s) | 783, 853, 996 |
| BstFNI | CGCG | 2 cut(s) | 29, 1068 |
| BstH2I | RGCGCY | 1 cut(s) | 638 |
| BstHHI | GCGC | 4 cut(s) | 29, 80, 637, 1068 |
| BstKTI | GATC | 4 cut(s) | 306, 439, 795, 812 |
| BstMAI | GTCTC | 3 cut(s) | 101, 466, 585 |
| BstMBI | GATC | 4 cut(s) | 303, 436, 792, 809 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 26, 35, 722, 857 |
| BstNI | CCWGG | 1 cut(s) | 1251 |
| BstNSI | RCATGY | 1 cut(s) | 725 |
| BstSCI | CCNGG | 1 cut(s) | 1249 |
| BstSFI | CTRYAG | 1 cut(s) | 862 |
| BstUI | CGCG | 2 cut(s) | 29, 1068 |
| BstV1I | GCAGC | 1 cut(s) | 1203 |
| BstV2I | GAAGAC | 2 cut(s) | 583, 884 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1266 |
| BstZ17I | GTATAC | 1 cut(s) | 1235 |
| BtgZI | GCGATG | 1 cut(s) | 44 |
| BtsCI | GGATG | 3 cut(s) | 783, 853, 996 |
| BtsI | GCAGTG | 1 cut(s) | 274 |
| BtsIMutI | CAGTG | 1 cut(s) | 274 |
| Cac8I | GCNNGC | 1 cut(s) | 723 |
| CfoI | GCGC | 4 cut(s) | 29, 80, 637, 1068 |
| Cfr10I | RCCGGY | 1 cut(s) | 853 |
| CseI | GACGC | 1 cut(s) | 1271 |
| Csp6I | GTAC | 3 cut(s) | 420, 1018, 1112 |
| CspAI | ACCGGT | 1 cut(s) | 853 |
| CviAII | CATG | 8 cut(s) | 70, 159, 722, 882, 958, 1021, 1063, 1266 |
| CviJI | RGCY | 9 cut(s) | 6, 52, 176, 310, 387, 599, 786, 1015, 1208 |
| CviKI_1 | RGCY | 9 cut(s) | 6, 52, 176, 310, 387, 599, 786, 1015, 1208 |
| CviQI | GTAC | 3 cut(s) | 420, 1018, 1112 |
| DdeI | CTNAG | 2 cut(s) | 319, 461 |
| DinI | GGCGCC | 1 cut(s) | 636 |
| DpnI | GATC | 4 cut(s) | 305, 438, 794, 811 |
| DpnII | GATC | 4 cut(s) | 303, 436, 792, 809 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1058 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1058 |
| Eco130I | CCWWGG | 2 cut(s) | 600, 683 |
| Eco31I | GGTCTC | 1 cut(s) | 585 |
| Eco32I | GATATC | 1 cut(s) | 748 |
| Eco57I | CTGAAG | 1 cut(s) | 577 |
| Eco88I | CYCGRG | 2 cut(s) | 257, 548 |
| EcoRI | GAATTC | 1 cut(s) | 623 |
| EcoRII | CCWGG | 1 cut(s) | 1249 |
| EcoRV | GATATC | 1 cut(s) | 748 |
| EcoT14I | CCWWGG | 2 cut(s) | 600, 683 |
| EgeI | GGCGCC | 1 cut(s) | 636 |
| EheI | GGCGCC | 1 cut(s) | 636 |
| ErhI | CCWWGG | 2 cut(s) | 600, 683 |
| FaeI | CATG | 8 cut(s) | 73, 162, 725, 885, 961, 1024, 1066, 1269 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 435, 467 |
| FaqI | GGGAC | 1 cut(s) | 931 |
| FatI | CATG | 8 cut(s) | 69, 158, 721, 881, 957, 1020, 1062, 1265 |
| FblI | GTMKAC | 2 cut(s) | 897, 1234 |
| Fnu4HI | GCNGC | 2 cut(s) | 784, 1217 |
| FokI | GGATG | 3 cut(s) | 790, 860, 1003 |
| Fsp4HI | GCNGC | 2 cut(s) | 784, 1217 |
| FspBI | CTAG | 1 cut(s) | 117 |
| GlaI | GCGC | 4 cut(s) | 28, 79, 636, 1067 |
| GluI | GCNGC | 2 cut(s) | 784, 1217 |
| GsuI | CTGGAG | 1 cut(s) | 1272 |
| HaeII | RGCGCY | 1 cut(s) | 638 |
| HapII | CCGG | 4 cut(s) | 377, 854, 1103, 1176 |
| HgaI | GACGC | 1 cut(s) | 1271 |
| HhaI | GCGC | 4 cut(s) | 29, 80, 637, 1068 |
| Hin1I | GRCGYC | 2 cut(s) | 373, 635 |
| Hin1II | CATG | 8 cut(s) | 73, 162, 725, 885, 961, 1024, 1066, 1269 |
| Hin6I | GCGC | 4 cut(s) | 27, 78, 635, 1066 |
| HinP1I | GCGC | 4 cut(s) | 27, 78, 635, 1066 |
| HincII | GTYRAC | 1 cut(s) | 898 |
| HindII | GTYRAC | 1 cut(s) | 898 |
| HinfI | GANTC | 9 cut(s) | 224, 380, 491, 536, 650, 707, 922, 1032, 1270 |
| HpaII | CCGG | 4 cut(s) | 377, 854, 1103, 1176 |
| HphI | GGTGA | 1 cut(s) | 836 |
| Hpy166II | GTNNAC | 3 cut(s) | 898, 1165, 1235 |
| Hpy188I | TCNGA | 8 cut(s) | 322, 464, 596, 661, 915, 1051, 1078, 1228 |
| Hpy188III | TCNNGA | 6 cut(s) | 341, 364, 377, 440, 983, 1259 |
| Hpy8I | GTNNAC | 3 cut(s) | 898, 1165, 1235 |
| HpyAV | CCTTC | 3 cut(s) | 24, 824, 1256 |
| HpyCH4III | ACNGT | 2 cut(s) | 299, 589 |
| HpyCH4IV | ACGT | 2 cut(s) | 373, 768 |
| HpyCH4V | TGCA | 6 cut(s) | 20, 267, 499, 851, 968, 1219 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 26, 35, 722, 857 |
| HpyF3I | CTNAG | 2 cut(s) | 319, 461 |
| HpySE526I | ACGT | 2 cut(s) | 373, 768 |
| Hsp92I | GRCGYC | 2 cut(s) | 373, 635 |
| Hsp92II | CATG | 8 cut(s) | 73, 162, 725, 885, 961, 1024, 1066, 1269 |
| HspAI | GCGC | 4 cut(s) | 27, 78, 635, 1066 |
| KasI | GGCGCC | 1 cut(s) | 634 |
| Kpn2I | TCCGGA | 1 cut(s) | 376 |
| Kzo9I | GATC | 4 cut(s) | 303, 436, 792, 809 |
| Lsp1109I | GCAGC | 1 cut(s) | 1203 |
| LweI | GCATC | 4 cut(s) | 29, 129, 838, 1138 |
| MaeI | CTAG | 1 cut(s) | 117 |
| MaeII | ACGT | 2 cut(s) | 373, 768 |
| MaeIII | GTNAC | 2 cut(s) | 445, 1120 |
| MalI | GATC | 4 cut(s) | 305, 438, 794, 811 |
| MbiI | CCGCTC | 1 cut(s) | 783 |
| MboI | GATC | 4 cut(s) | 303, 436, 792, 809 |
| MboII | GAAGA | 5 cut(s) | 425, 583, 839, 851, 889 |
| MluCI | AATT | 6 cut(s) | 150, 623, 655, 842, 1222, 1275 |
| Mly113I | GGCGCC | 1 cut(s) | 635 |
| MlyI | GAGTC | 2 cut(s) | 659, 916 |
| MmeI | TCCRAC | 1 cut(s) | 159 |
| MroI | TCCGGA | 1 cut(s) | 376 |
| MroXI | GAANNNNTTC | 2 cut(s) | 998, 1045 |
| MseI | TTAA | 5 cut(s) | 153, 218, 453, 902, 1116 |
| MslI | CAYNNNNRTG | 2 cut(s) | 941, 1067 |
| MspCI | CTTAAG | 1 cut(s) | 452 |
| MspI | CCGG | 4 cut(s) | 377, 854, 1103, 1176 |
| MspR9I | CCNGG | 1 cut(s) | 1251 |
| MvaI | CCWGG | 1 cut(s) | 1251 |
| MvnI | CGCG | 2 cut(s) | 29, 1068 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 26, 35, 722, 857 |
| NarI | GGCGCC | 1 cut(s) | 635 |
| NdeII | GATC | 4 cut(s) | 303, 436, 792, 809 |
| NlaIII | CATG | 8 cut(s) | 73, 162, 725, 885, 961, 1024, 1066, 1269 |
| NlaIV | GGNNCC | 2 cut(s) | 636, 1244 |
| NspI | RCATGY | 1 cut(s) | 725 |
| PaeI | GCATGC | 1 cut(s) | 725 |
| PdmI | GAANNNNTTC | 2 cut(s) | 998, 1045 |
| PfeI | GAWTC | 7 cut(s) | 224, 380, 491, 536, 707, 1032, 1270 |
| PfoI | TCCNGGA | 1 cut(s) | 1249 |
| PinAI | ACCGGT | 1 cut(s) | 853 |
| PkrI | GCNGC | 2 cut(s) | 785, 1218 |
| PleI | GAGTC | 2 cut(s) | 658, 916 |
| PluTI | GGCGCC | 1 cut(s) | 638 |
| PpsI | GAGTC | 2 cut(s) | 658, 916 |
| Psp6I | CCWGG | 1 cut(s) | 1249 |
| PspGI | CCWGG | 1 cut(s) | 1249 |
| PspN4I | GGNNCC | 2 cut(s) | 636, 1244 |
| RsaI | GTAC | 3 cut(s) | 421, 1019, 1113 |
| RsaNI | GTAC | 3 cut(s) | 420, 1018, 1112 |
| RseI | CAYNNNNRTG | 2 cut(s) | 941, 1067 |
| SalI | GTCGAC | 1 cut(s) | 896 |
| SaqAI | TTAA | 5 cut(s) | 153, 218, 453, 902, 1116 |
| SatI | GCNGC | 2 cut(s) | 784, 1217 |
| Sau3AI | GATC | 4 cut(s) | 303, 436, 792, 809 |
| ScaI | AGTACT | 1 cut(s) | 1113 |
| SchI | GAGTC | 2 cut(s) | 659, 916 |
| ScrFI | CCNGG | 1 cut(s) | 1251 |
| SetI | ASST | 8 cut(s) | 8, 54, 245, 376, 508, 771, 1048, 1188 |
| SfaNI | GCATC | 4 cut(s) | 29, 129, 838, 1138 |
| SfcI | CTRYAG | 1 cut(s) | 862 |
| SfoI | GGCGCC | 1 cut(s) | 636 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 941, 1067 |
| SmlI | CTYRAG | 1 cut(s) | 452 |
| SmoI | CTYRAG | 1 cut(s) | 452 |
| SphI | GCATGC | 1 cut(s) | 725 |
| Sse9I | AATT | 6 cut(s) | 150, 623, 655, 842, 1222, 1275 |
| SsiI | CCGC | 3 cut(s) | 577, 783, 1087 |
| SspDI | GGCGCC | 1 cut(s) | 634 |
| SspMI | CTAG | 1 cut(s) | 117 |
| StyD4I | CCNGG | 1 cut(s) | 1249 |
| StyI | CCWWGG | 2 cut(s) | 600, 683 |
| TaaI | ACNGT | 2 cut(s) | 299, 589 |
| TaiI | ACGT | 2 cut(s) | 376, 771 |
| TaqI | TCGA | 4 cut(s) | 43, 302, 534, 897 |
| TasI | AATT | 6 cut(s) | 150, 623, 655, 842, 1222, 1275 |
| TatI | WGTACW | 2 cut(s) | 419, 1111 |
| TauI | GCSGC | 1 cut(s) | 786 |
| TfiI | GAWTC | 7 cut(s) | 224, 380, 491, 536, 707, 1032, 1270 |
| Tru1I | TTAA | 5 cut(s) | 153, 218, 453, 902, 1116 |
| Tru9I | TTAA | 5 cut(s) | 153, 218, 453, 902, 1116 |
| TscAI | CASTG | 1 cut(s) | 274 |
| TseI | GCWGC | 1 cut(s) | 1216 |
| TspDTI | ATGAA | 7 cut(s) | 47, 678, 852, 1007, 1037, 1109, 1212 |
| TspRI | CASTG | 1 cut(s) | 274 |
| Vha464I | CTTAAG | 1 cut(s) | 452 |
| XapI | RAATTY | 2 cut(s) | 623, 1275 |
| XceI | RCATGY | 1 cut(s) | 725 |
| XmiI | GTMKAC | 2 cut(s) | 897, 1234 |
| XmnI | GAANNNNTTC | 2 cut(s) | 998, 1045 |
| XspI | CTAG | 1 cut(s) | 117 |
| ZraI | GACGTC | 1 cut(s) | 374 |
| ZrmI | AGTACT | 1 cut(s) | 1113 |