Protein trichome birefringence-like 3
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G01360 AT5G01360 |
| fragaria_vesca | FvH4_6g11230 FvH4_6g11230 |
| malus_domestica | MD00G1172500.v1.1 MD12G1171500.v1.1 |
| prunus_persica | Prupe.6G279700_v2.0.a1 |
| pyrus_communis | pycom04g14210 pycom12g16280 |
| rosa_chinensis | RchiOBHm_Chr3g0462741 |
| rosa_laevigata | RLG00000024836 |
| rosa_multiflora | Rmu_sc0000766.1_g000003 Rmu_sc0011057.1_g000007 |
| rosa_roxburghii | Rroxscaffold_6G00417240 |
| rosa_rugosa | Rorug03G0058900 |
| rosa_samantha | Rh3DG122300 |
| rosa_wichuraiana | Rw3G009900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 379 |
| AccB1I | GGYRCC | 1 cut(s) | 1335 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 825 |
| AccBSI | CCGCTC | 1 cut(s) | 876 |
| AccI | GTMKAC | 1 cut(s) | 990 |
| AccII | CGCG | 2 cut(s) | 48, 666 |
| AccIII | TCCGGA | 2 cut(s) | 379, 1351 |
| AciI | CCGC | 4 cut(s) | 48, 558, 666, 876 |
| AclWI | GGATC | 2 cut(s) | 406, 524 |
| AcsI | RAATTY | 3 cut(s) | 716, 1190, 1368 |
| AcuI | CTGAAG | 1 cut(s) | 670 |
| AcyI | GRCGYC | 1 cut(s) | 376 |
| AfaI | GTAC | 4 cut(s) | 470, 929, 1206, 1281 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 386, 825 |
| AflII | CTTAAG | 1 cut(s) | 545 |
| AgsI | TTSAA | 8 cut(s) | 151, 278, 298, 629, 716, 853, 970, 1096 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 652 |
| AjnI | CCWGG | 1 cut(s) | 1342 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 131, 163 |
| AleI | CACNNNNGTG | 1 cut(s) | 998 |
| AluBI | AGCT | 2 cut(s) | 6, 55 |
| AluI | AGCT | 2 cut(s) | 6, 55 |
| Alw26I | GTCTC | 1 cut(s) | 104 |
| AlwI | GGATC | 2 cut(s) | 406, 524 |
| Aor13HI | TCCGGA | 2 cut(s) | 379, 1351 |
| AoxI | GGCC | 1 cut(s) | 1273 |
| ApeKI | GCWGC | 3 cut(s) | 270, 950, 1309 |
| ApoI | RAATTY | 3 cut(s) | 716, 1190, 1368 |
| AseI | ATTAAT | 1 cut(s) | 456 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 540, 1138 |
| AspLEI | GCGC | 3 cut(s) | 32, 83, 1061 |
| AspS9I | GGNCC | 1 cut(s) | 646 |
| AsuII | TTCGAA | 1 cut(s) | 185 |
| AvaII | GGWCC | 1 cut(s) | 646 |
| AxyI | CCTNAGG | 1 cut(s) | 261 |
| BaeGI | GKGCMC | 1 cut(s) | 672 |
| BanI | GGYRCC | 1 cut(s) | 1335 |
| BanII | GRGCYC | 2 cut(s) | 730, 905 |
| BbsI | GAAGAC | 2 cut(s) | 676, 977 |
| BbvI | GCAGC | 3 cut(s) | 282, 937, 1296 |
| BccI | CCATC | 3 cut(s) | 22, 641, 1073 |
| BciT130I | CCWGG | 1 cut(s) | 1344 |
| BciVI | GTATCC | 1 cut(s) | 220 |
| BcoDI | GTCTC | 1 cut(s) | 104 |
| BfaI | CTAG | 1 cut(s) | 614 |
| BfmI | CTRYAG | 1 cut(s) | 955 |
| BfrI | CTTAAG | 1 cut(s) | 545 |
| BfuI | GTATCC | 1 cut(s) | 220 |
| BisI | GCNGC | 4 cut(s) | 271, 877, 951, 1310 |
| BlsI | GCNGC | 4 cut(s) | 272, 878, 952, 1311 |
| BmcAI | AGTACT | 2 cut(s) | 1206, 1281 |
| Bme1390I | CCNGG | 1 cut(s) | 1344 |
| Bme18I | GGWCC | 1 cut(s) | 646 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 652 |
| BmgT120I | GGNCC | 1 cut(s) | 646 |
| BmiI | GGNNCC | 2 cut(s) | 729, 1337 |
| BmrFI | CCNGG | 1 cut(s) | 1344 |
| BmrI | ACTGGG | 4 cut(s) | 733, 907, 994, 1075 |
| BmsI | GCATC | 4 cut(s) | 32, 132, 1079, 1231 |
| BmuI | ACTGGG | 4 cut(s) | 733, 907, 994, 1075 |
| BpiI | GAAGAC | 2 cut(s) | 676, 977 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 27 |
| BpmI | CTGGAG | 1 cut(s) | 1365 |
| Bpu14I | TTCGAA | 1 cut(s) | 185 |
| BsaAI | YACGTR | 1 cut(s) | 468 |
| BsaBI | GATNNNNATC | 1 cut(s) | 122 |
| BsaHI | GRCGYC | 1 cut(s) | 376 |
| BsaJI | CCNNGG | 2 cut(s) | 431, 693 |
| BsaWI | WCCGGW | 4 cut(s) | 379, 1195, 1268, 1351 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1263, 1293 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 386, 825 |
| Bse118I | RCCGGY | 1 cut(s) | 946 |
| Bse1I | ACTGG | 8 cut(s) | 216, 404, 728, 830, 902, 989, 1070, 1141 |
| Bse21I | CCTNAGG | 1 cut(s) | 261 |
| Bse3DI | GCAATG | 3 cut(s) | 39, 410, 425 |
| Bse8I | GATNNNNATC | 1 cut(s) | 122 |
| BseAI | TCCGGA | 2 cut(s) | 379, 1351 |
| BseBI | CCWGG | 1 cut(s) | 1344 |
| BseDI | CCNNGG | 2 cut(s) | 431, 693 |
| BseGI | GGATG | 2 cut(s) | 876, 1089 |
| BseJI | GATNNNNATC | 1 cut(s) | 122 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 386, 825 |
| BseMI | GCAATG | 3 cut(s) | 39, 410, 425 |
| BseMII | CTCAG | 1 cut(s) | 252 |
| BseNI | ACTGG | 8 cut(s) | 216, 404, 728, 830, 902, 989, 1070, 1141 |
| BseRI | GAGGAG | 2 cut(s) | 92, 278 |
| BseSI | GKGCMC | 1 cut(s) | 672 |
| BseXI | GCAGC | 3 cut(s) | 282, 937, 1296 |
| BsgI | GTGCAG | 2 cut(s) | 289, 1295 |
| Bsh1236I | CGCG | 2 cut(s) | 48, 666 |
| Bsh1285I | CGRYCG | 1 cut(s) | 309 |
| BshFI | GGCC | 1 cut(s) | 1275 |
| BshNI | GGYRCC | 1 cut(s) | 1335 |
| BsiEI | CGRYCG | 1 cut(s) | 309 |
| BsiSI | CCGG | 5 cut(s) | 380, 947, 1196, 1269, 1352 |
| BslFI | GGGAC | 1 cut(s) | 1024 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 386, 825 |
| BsmAI | GTCTC | 1 cut(s) | 104 |
| BsmFI | GGGAC | 1 cut(s) | 1024 |
| BsnI | GGCC | 1 cut(s) | 1275 |
| Bsp119I | TTCGAA | 1 cut(s) | 185 |
| Bsp1286I | GDGCHC | 3 cut(s) | 672, 730, 905 |
| Bsp13I | TCCGGA | 2 cut(s) | 379, 1351 |
| Bsp143I | GATC | 5 cut(s) | 306, 411, 529, 885, 1152 |
| BspACI | CCGC | 4 cut(s) | 48, 558, 666, 876 |
| BspANI | GGCC | 1 cut(s) | 1275 |
| BspCNI | CTCAG | 1 cut(s) | 253 |
| BspEI | TCCGGA | 2 cut(s) | 379, 1351 |
| BspFNI | CGCG | 2 cut(s) | 48, 666 |
| BspLI | GGNNCC | 2 cut(s) | 729, 1337 |
| BspPI | GGATC | 2 cut(s) | 406, 524 |
| BspT104I | TTCGAA | 1 cut(s) | 185 |
| BspT107I | GGYRCC | 1 cut(s) | 1335 |
| BspTI | CTTAAG | 1 cut(s) | 545 |
| BsrBI | CCGCTC | 1 cut(s) | 876 |
| BsrDI | GCAATG | 3 cut(s) | 39, 410, 425 |
| BsrFI | RCCGGY | 1 cut(s) | 946 |
| BsrI | ACTGG | 8 cut(s) | 216, 404, 728, 830, 902, 989, 1070, 1141 |
| BssAI | RCCGGY | 1 cut(s) | 946 |
| BssECI | CCNNGG | 2 cut(s) | 431, 693 |
| BssMI | GATC | 5 cut(s) | 306, 411, 529, 885, 1152 |
| BssNI | GRCGYC | 1 cut(s) | 376 |
| BssT1I | CCWWGG | 2 cut(s) | 431, 693 |
| Bst2UI | CCWGG | 1 cut(s) | 1344 |
| Bst4CI | ACNGT | 3 cut(s) | 302, 498, 682 |
| BstACI | GRCGYC | 1 cut(s) | 376 |
| BstAFI | CTTAAG | 1 cut(s) | 545 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 950 |
| BstBAI | YACGTR | 1 cut(s) | 468 |
| BstBI | TTCGAA | 1 cut(s) | 185 |
| BstC8I | GCNNGC | 2 cut(s) | 668, 816 |
| BstDEI | CTNAG | 2 cut(s) | 261, 554 |
| BstF5I | GGATG | 2 cut(s) | 876, 1089 |
| BstFNI | CGCG | 2 cut(s) | 48, 666 |
| BstHHI | GCGC | 3 cut(s) | 32, 83, 1061 |
| BstKTI | GATC | 5 cut(s) | 309, 414, 532, 888, 1155 |
| BstMAI | GTCTC | 1 cut(s) | 104 |
| BstMBI | GATC | 5 cut(s) | 306, 411, 529, 885, 1152 |
| BstMCI | CGRYCG | 1 cut(s) | 309 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 29, 815, 950 |
| BstNI | CCWGG | 1 cut(s) | 1344 |
| BstNSI | RCATGY | 1 cut(s) | 818 |
| BstSCI | CCNGG | 1 cut(s) | 1342 |
| BstSFI | CTRYAG | 1 cut(s) | 955 |
| BstSLI | GKGCMC | 1 cut(s) | 672 |
| BstSNI | TACGTA | 1 cut(s) | 468 |
| BstUI | CGCG | 2 cut(s) | 48, 666 |
| BstV1I | GCAGC | 3 cut(s) | 282, 937, 1296 |
| BstV2I | GAAGAC | 2 cut(s) | 676, 977 |
| BstX2I | RGATCY | 1 cut(s) | 411 |
| BstYI | RGATCY | 1 cut(s) | 411 |
| Bsu36I | CCTNAGG | 1 cut(s) | 261 |
| BsuI | GTATCC | 1 cut(s) | 220 |
| BsuRI | GGCC | 1 cut(s) | 1275 |
| BtsCI | GGATG | 2 cut(s) | 876, 1089 |
| BtsIMutI | CAGTG | 2 cut(s) | 209, 694 |
| Cac8I | GCNNGC | 2 cut(s) | 668, 816 |
| CfoI | GCGC | 3 cut(s) | 32, 83, 1061 |
| Cfr10I | RCCGGY | 1 cut(s) | 946 |
| Cfr13I | GGNCC | 1 cut(s) | 646 |
| CseI | GACGC | 1 cut(s) | 672 |
| Csp6I | GTAC | 4 cut(s) | 469, 928, 1205, 1280 |
| CviQI | GTAC | 4 cut(s) | 469, 928, 1205, 1280 |
| DdeI | CTNAG | 2 cut(s) | 261, 554 |
| DpnI | GATC | 5 cut(s) | 308, 413, 531, 887, 1154 |
| DpnII | GATC | 5 cut(s) | 306, 411, 529, 885, 1152 |
| DraI | TTTAAA | 1 cut(s) | 462 |
| DriI | GACNNNNNGTC | 1 cut(s) | 652 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 652 |
| Eco105I | TACGTA | 1 cut(s) | 468 |
| Eco130I | CCWWGG | 2 cut(s) | 431, 693 |
| Eco24I | GRGCYC | 2 cut(s) | 730, 905 |
| Eco32I | GATATC | 1 cut(s) | 841 |
| Eco47I | GGWCC | 1 cut(s) | 646 |
| Eco57I | CTGAAG | 1 cut(s) | 670 |
| Eco81I | CCTNAGG | 1 cut(s) | 261 |
| EcoRI | GAATTC | 1 cut(s) | 716 |
| EcoRII | CCWGG | 1 cut(s) | 1342 |
| EcoRV | GATATC | 1 cut(s) | 841 |
| EcoT14I | CCWWGG | 2 cut(s) | 431, 693 |
| EcoT38I | GRGCYC | 2 cut(s) | 730, 905 |
| ErhI | CCWWGG | 2 cut(s) | 431, 693 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 528, 560 |
| FaqI | GGGAC | 1 cut(s) | 1024 |
| FauI | CCCGC | 1 cut(s) | 659 |
| FblI | GTMKAC | 1 cut(s) | 990 |
| Fnu4HI | GCNGC | 4 cut(s) | 271, 877, 951, 1310 |
| FokI | GGATG | 2 cut(s) | 883, 1096 |
| FriOI | GRGCYC | 2 cut(s) | 730, 905 |
| Fsp4HI | GCNGC | 4 cut(s) | 271, 877, 951, 1310 |
| FspBI | CTAG | 1 cut(s) | 614 |
| GlaI | GCGC | 3 cut(s) | 31, 82, 1060 |
| GluI | GCNGC | 4 cut(s) | 271, 877, 951, 1310 |
| GsuI | CTGGAG | 1 cut(s) | 1365 |
| HaeIII | GGCC | 1 cut(s) | 1275 |
| HapII | CCGG | 5 cut(s) | 380, 947, 1196, 1269, 1352 |
| HgaI | GACGC | 1 cut(s) | 672 |
| HhaI | GCGC | 3 cut(s) | 32, 83, 1061 |
| Hin1I | GRCGYC | 1 cut(s) | 376 |
| Hin6I | GCGC | 3 cut(s) | 30, 81, 1059 |
| HinP1I | GCGC | 3 cut(s) | 30, 81, 1059 |
| HincII | GTYRAC | 1 cut(s) | 991 |
| HindII | GTYRAC | 1 cut(s) | 991 |
| HinfI | GANTC | 8 cut(s) | 383, 584, 629, 743, 800, 1003, 1125, 1363 |
| HpaII | CCGG | 5 cut(s) | 380, 947, 1196, 1269, 1352 |
| Hpy166II | GTNNAC | 2 cut(s) | 991, 1258 |
| Hpy188I | TCNGA | 8 cut(s) | 325, 754, 770, 777, 1008, 1144, 1171, 1321 |
| Hpy188III | TCNNGA | 6 cut(s) | 344, 367, 380, 533, 1076, 1352 |
| Hpy8I | GTNNAC | 2 cut(s) | 991, 1258 |
| HpyAV | CCTTC | 4 cut(s) | 100, 772, 917, 1349 |
| HpyCH4III | ACNGT | 3 cut(s) | 302, 498, 682 |
| HpyCH4IV | ACGT | 3 cut(s) | 376, 467, 861 |
| HpyCH4V | TGCA | 8 cut(s) | 23, 270, 423, 474, 592, 707, 1312, 1326 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 29, 815, 950 |
| HpyF3I | CTNAG | 2 cut(s) | 261, 554 |
| HpySE526I | ACGT | 3 cut(s) | 376, 467, 861 |
| Hsp92I | GRCGYC | 1 cut(s) | 376 |
| HspAI | GCGC | 3 cut(s) | 30, 81, 1059 |
| Kpn2I | TCCGGA | 2 cut(s) | 379, 1351 |
| Kzo9I | GATC | 5 cut(s) | 306, 411, 529, 885, 1152 |
| LmnI | GCTCC | 1 cut(s) | 733 |
| Lsp1109I | GCAGC | 3 cut(s) | 282, 937, 1296 |
| LweI | GCATC | 4 cut(s) | 32, 132, 1079, 1231 |
| MaeI | CTAG | 1 cut(s) | 614 |
| MaeII | ACGT | 3 cut(s) | 376, 467, 861 |
| MaeIII | GTNAC | 1 cut(s) | 1213 |
| MalI | GATC | 5 cut(s) | 308, 413, 531, 887, 1154 |
| MbiI | CCGCTC | 1 cut(s) | 876 |
| MboI | GATC | 5 cut(s) | 306, 411, 529, 885, 1152 |
| MboII | GAAGA | 6 cut(s) | 438, 676, 932, 944, 982, 1162 |
| MflI | RGATCY | 1 cut(s) | 411 |
| MhlI | GDGCHC | 3 cut(s) | 672, 730, 905 |
| MmeI | TCCRAC | 1 cut(s) | 162 |
| MroI | TCCGGA | 2 cut(s) | 379, 1351 |
| MroXI | GAANNNNTTC | 2 cut(s) | 540, 1138 |
| MseI | TTAA | 5 cut(s) | 156, 456, 461, 500, 546 |
| MslI | CAYNNNNRTG | 3 cut(s) | 998, 1034, 1160 |
| MspCI | CTTAAG | 1 cut(s) | 545 |
| MspI | CCGG | 5 cut(s) | 380, 947, 1196, 1269, 1352 |
| MspR9I | CCNGG | 1 cut(s) | 1344 |
| MvaI | CCWGG | 1 cut(s) | 1344 |
| MvnI | CGCG | 2 cut(s) | 48, 666 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 29, 815, 950 |
| NdeII | GATC | 5 cut(s) | 306, 411, 529, 885, 1152 |
| NlaIV | GGNNCC | 2 cut(s) | 729, 1337 |
| NspI | RCATGY | 1 cut(s) | 818 |
| NspV | TTCGAA | 1 cut(s) | 185 |
| OliI | CACNNNNGTG | 1 cut(s) | 998 |
| PaeI | GCATGC | 1 cut(s) | 818 |
| PdmI | GAANNNNTTC | 2 cut(s) | 540, 1138 |
| PfeI | GAWTC | 8 cut(s) | 383, 584, 629, 743, 800, 1003, 1125, 1363 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 825 |
| PfoI | TCCNGGA | 1 cut(s) | 1342 |
| PkrI | GCNGC | 4 cut(s) | 272, 878, 952, 1311 |
| Ple19I | CGATCG | 1 cut(s) | 309 |
| Ppu21I | YACGTR | 1 cut(s) | 468 |
| PshBI | ATTAAT | 1 cut(s) | 456 |
| Psp6I | CCWGG | 1 cut(s) | 1342 |
| PspGI | CCWGG | 1 cut(s) | 1342 |
| PspN4I | GGNNCC | 2 cut(s) | 729, 1337 |
| PspPI | GGNCC | 1 cut(s) | 646 |
| PsuI | RGATCY | 1 cut(s) | 411 |
| PvuI | CGATCG | 1 cut(s) | 309 |
| RsaI | GTAC | 4 cut(s) | 470, 929, 1206, 1281 |
| RsaNI | GTAC | 4 cut(s) | 469, 928, 1205, 1280 |
| RseI | CAYNNNNRTG | 3 cut(s) | 998, 1034, 1160 |
| SalI | GTCGAC | 1 cut(s) | 989 |
| SaqAI | TTAA | 5 cut(s) | 156, 456, 461, 500, 546 |
| SatI | GCNGC | 4 cut(s) | 271, 877, 951, 1310 |
| Sau3AI | GATC | 5 cut(s) | 306, 411, 529, 885, 1152 |
| Sau96I | GGNCC | 1 cut(s) | 646 |
| ScaI | AGTACT | 2 cut(s) | 1206, 1281 |
| ScrFI | CCNGG | 1 cut(s) | 1344 |
| SduI | GDGCHC | 3 cut(s) | 672, 730, 905 |
| SetI | ASST | 7 cut(s) | 8, 57, 248, 379, 470, 601, 864 |
| SfaNI | GCATC | 4 cut(s) | 32, 132, 1079, 1231 |
| SfcI | CTRYAG | 1 cut(s) | 955 |
| SfuI | TTCGAA | 1 cut(s) | 185 |
| SinI | GGWCC | 1 cut(s) | 646 |
| SmiI | ATTTAAAT | 1 cut(s) | 462 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 998, 1034, 1160 |
| SmlI | CTYRAG | 1 cut(s) | 545 |
| SmoI | CTYRAG | 1 cut(s) | 545 |
| SnaBI | TACGTA | 1 cut(s) | 468 |
| SphI | GCATGC | 1 cut(s) | 818 |
| SsiI | CCGC | 4 cut(s) | 48, 558, 666, 876 |
| SspMI | CTAG | 1 cut(s) | 614 |
| StyD4I | CCNGG | 1 cut(s) | 1342 |
| StyI | CCWWGG | 2 cut(s) | 431, 693 |
| SwaI | ATTTAAAT | 1 cut(s) | 462 |
| TaaI | ACNGT | 3 cut(s) | 302, 498, 682 |
| TaiI | ACGT | 3 cut(s) | 379, 470, 864 |
| TaqI | TCGA | 5 cut(s) | 17, 185, 305, 309, 990 |
| TatI | WGTACW | 2 cut(s) | 1204, 1279 |
| TauI | GCSGC | 1 cut(s) | 879 |
| TfiI | GAWTC | 8 cut(s) | 383, 584, 629, 743, 800, 1003, 1125, 1363 |
| Tru1I | TTAA | 5 cut(s) | 156, 456, 461, 500, 546 |
| Tru9I | TTAA | 5 cut(s) | 156, 456, 461, 500, 546 |
| TscAI | CASTG | 2 cut(s) | 216, 694 |
| TseI | GCWGC | 3 cut(s) | 270, 950, 1309 |
| TspDTI | ATGAA | 7 cut(s) | 50, 82, 438, 491, 771, 1130, 1202 |
| TspGWI | ACGGA | 2 cut(s) | 130, 930 |
| TspRI | CASTG | 2 cut(s) | 216, 694 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 825 |
| Vha464I | CTTAAG | 1 cut(s) | 545 |
| VpaK11BI | GGWCC | 1 cut(s) | 646 |
| VspI | ATTAAT | 1 cut(s) | 456 |
| XapI | RAATTY | 3 cut(s) | 716, 1190, 1368 |
| XceI | RCATGY | 1 cut(s) | 818 |
| XmiI | GTMKAC | 1 cut(s) | 990 |
| XmnI | GAANNNNTTC | 2 cut(s) | 540, 1138 |
| XspI | CTAG | 1 cut(s) | 614 |
| ZraI | GACGTC | 1 cut(s) | 377 |
| ZrmI | AGTACT | 2 cut(s) | 1206, 1281 |