MD01G1001900.v1.1

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0005035
Physical Location & Seq
Forward (+)
847717 .. 851332
3616 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1001900.v1.1.491

Sequence Viewer

Length: 1914 bp
ATGGCATCTTCTCATGGCAATACAAACTCTGAAGCAGCAAAAGTAATGGAACAAATAATCACTGAATTCTATGCCAAAAGTCTCCACATAATCCTTGAATCCAGGACTCCATATATGTCCTCGCGTAATTTTAGTGGTGAACGAACCCTATCATCGCCGTCCTCATCCTCATCATCCTCATCGAGTGTGAGGCCGAGGGATAAGTGGTTTAATCTAGCTCTTAAGGAATGCCCTGCTGCACTGGAGAATCTTGATCTCTTCTGCAGCCAGGGCCATTTTGAACCTGTGGTGGTTGATGTGATTATGGTTCAGAGACCACTTGATTGTGACCTGGTGAAGTGTTCACCTAAAAGGGATCTTACTAGGAACTCGTCATTGAAAGAGCGTTATCCATACTGTTGGAATTATGAGCAGGACGAATTTGGGTGTGATGCAAAGAGTGAAAAGATTATTGAGAGATGGGTTGTGCAGTATGAGAATCGGAAGATCAGAGACACAAATTCAGGAAGCAGGAGGTCGAGCAATAATAATTTGTCTACATTGTATAAGAAATCAATGTTACTTTTGAGATCTTTGTATGTCACTGTTAGGCTATTACCTGCGTACAAAGTTTATCGCGACCTCATTTCATCTGGACAAATTTGGCCATTTGCTATCACTCACCGGGTATCCTCTTTTGCTGAGAACTTCACTTGTAGAGAAGAAGCAGAAATGCAGCGGTTCGGGTTCACCCCTGTGGATACAGCTGGTGGCAGGCTTTGTCTTTCTGTATTGTATTGTTTATCACTTTCAGATGTAAGCTCTGAACCATCAACTCCTATGTCTTCACAACTTATTCCGGACTATGTTGGCAGCCCATTGACAGACCCTCTTAAAAGGTTCCCATCACTTCCTGTTACAGGAACAGTAGCACATGCCCATCCATCATCGTCCCCATTCTCAAGGCGGCATAGTTGGAGTTTTGACCATTATAGAGCTTCACCACCTTCAGTTTCTTTCTCACCTTCACCTACATATTCAGAACCACATACTTTGATTTCTAATCCAGGTACTCGTCGTTTTCAACCAAAAACCTTGCCACCTCATCCGCCTGAAACATCTCATGTTCATAAAAAGGATTCAACCTTTGATGAGTATTGTCCTTCACCTGCCGTTTCTCCCTCACAATCCTCAGCTGCACCGTCATTGCCAATCTTTATTCCTGGGAGTCATCCTTCAAAGCCTCTTTTACAATCTGAGAGTGCACCAGTTAGCGAACCGGCGGCTAAACTTGCTAATTTCCCTGCATATTCCAACAAGCTAAATTTTCCTGTAAGAGGAACTGGATCTGGAAGTTTTAAGAGTTGTAAAACTACAGGTTTTAGTCAGCCTGGTACTGCGGTTGAGAAGTTGTTTTCTTTTGGGAAAGATGAAGCTAGACAATATTCTGGGGTGAAATCCAGCAGCTCCAGTAGGTCTTTTCCTGATGATTTTGATGATACTGAGTTTCCTTGCCCATTTGATGTGGATGATGATGATGTGACAGATCCAGGCAGCAGACCTGAATCTTTTGACAAACATGTACCCCTATGTGAGCCACATGAGTTTGAAGGGTTGTTTACAATTAAAAAATCCCAAGATGCTGCTGTTGGGGCGCTTGTACAGATGTTAAGGAAAGCTCCACCTCTCCGGCAGGATCACTCGAATTCAGTAAATTTGTCACAGGCAGGCAGGCCTGAAATCTGGAGCAACTGTAGCCAAGAGCCTAATCGGTCTTCTGAGGGACAGGCATCAGTTCAGCGTGCTGGTTCGTCAAGCATCGTTTCATCTGGGCTCATATCATCAAAAACTACTGCCGATGCATTACGAGAGCTCCAGGGTTACAGGGACATGAAAAACTCGTTAATCGGGAAAGGCAGTAAGCCTCACATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04140 ko04211 map04136 map04138 map04140 map04211
Pfam Domains
Protein Families
ATG13

Protein Analysis

638

Amino Acids

70.38

Weight (kDa)

8.1

Isoelectric Point (pI)

64.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATG13 PF10033 20 - 259 9.2e-36 Autophagy-related protein 13
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1156
Acc36I ACCTGC 2 cut(s) 607, 1156
AccI GTMKAC 1 cut(s) 536
AccII CGCG 2 cut(s) 124, 618
AccIII TCCGGA 1 cut(s) 838
AciI CCGC 5 cut(s) 718, 946, 1088, 1262, 1379
AclWI GGATC 4 cut(s) 363, 1333, 1520, 1683
AcoI YGGCCR 1 cut(s) 644
AcsI RAATTY 7 cut(s) 65, 419, 499, 639, 1303, 1684, 1693
AcuI CTGAAG 2 cut(s) 51, 972
AfaI GTAC 5 cut(s) 605, 1051, 1375, 1563, 1641
AfiI CCNNNNNNNGG 2 cut(s) 899, 1316
AflII CTTAAG 1 cut(s) 221
AflIII ACRYGT 1 cut(s) 1558
AgsI TTSAA 7 cut(s) 98, 281, 379, 1064, 1122, 1218, 1589
AjnI CCWGG 8 cut(s) 101, 267, 330, 1045, 1201, 1369, 1528, 1854
AleI CACNNNNGTG 1 cut(s) 734
Alw21I GWGCWC 2 cut(s) 1246, 1854
Alw26I GTCTC 3 cut(s) 86, 307, 486
Alw44I GTGCAC 1 cut(s) 1242
AlwI GGATC 4 cut(s) 363, 1333, 1520, 1683
Aor13HI TCCGGA 1 cut(s) 838
AoxI GGCC 4 cut(s) 191, 271, 644, 1712
ApaLI GTGCAC 1 cut(s) 1242
ApeKI GCWGC 9 cut(s) 35, 236, 264, 715, 852, 1175, 1443, 1533, 1622
ApoI RAATTY 7 cut(s) 65, 419, 499, 639, 1303, 1684, 1693
AspLEI GCGC 1 cut(s) 1636
AspS9I GGNCC 1 cut(s) 271
AsuC2I CCSGG 1 cut(s) 665
BaeGI GKGCMC 1 cut(s) 1246
BaeI ACNNNNGTAYC 2 cut(s) 1365, 1398
BalI TGGCCA 1 cut(s) 646
BanII GRGCYC 2 cut(s) 1815, 1854
BbsI GAAGAC 2 cut(s) 816, 1746
Bbv12I GWGCWC 2 cut(s) 1246, 1854
BbvCI CCTCAGC 1 cut(s) 1171
BbvI GCAGC 9 cut(s) 47, 223, 276, 727, 864, 1162, 1455, 1545, 1609
BccI CCATC 5 cut(s) 453, 817, 892, 927, 931
BceAI ACGGC 2 cut(s) 142, 1136
BciT130I CCWGG 8 cut(s) 103, 269, 332, 1047, 1203, 1371, 1530, 1856
BciVI GTATCC 2 cut(s) 679, 733
BcnI CCSGG 1 cut(s) 665
BcoDI GTCTC 3 cut(s) 86, 307, 486
BfaI CTAG 4 cut(s) 215, 363, 1416, 1912
BfmI CTRYAG 3 cut(s) 262, 1353, 1732
BfoI RGCGCY 1 cut(s) 1637
BfrI CTTAAG 1 cut(s) 221
BfuAI ACCTGC 2 cut(s) 607, 1156
BfuI GTATCC 2 cut(s) 679, 733
BglII AGATCT 1 cut(s) 569
Bme1390I CCNGG 9 cut(s) 103, 269, 332, 665, 1047, 1203, 1371, 1530, 1856
BmgT120I GGNCC 1 cut(s) 271
BmiI GGNNCC 1 cut(s) 881
BmrFI CCNGG 9 cut(s) 103, 269, 332, 665, 1047, 1203, 1371, 1530, 1856
BmsI GCATC 6 cut(s) 14, 421, 1609, 1778, 1806, 1828
BpiI GAAGAC 2 cut(s) 816, 1746
BpmI CTGGAG 4 cut(s) 263, 1432, 1744, 1838
Bpu10I CCTNAGC 1 cut(s) 1171
BpuEI CTTGAG 1 cut(s) 925
BpuMI CCSGG 1 cut(s) 665
BsaI GGTCTC 1 cut(s) 307
BsaJI CCNNGG 4 cut(s) 194, 268, 1202, 1855
BsaWI WCCGGW 1 cut(s) 838
BsaXI ACNNNNNCTCC 4 cut(s) 1717, 1747, 1836, 1866
Bsc4I CCNNNNNNNGG 2 cut(s) 899, 1316
Bse118I RCCGGY 1 cut(s) 1258
Bse1I ACTGG 4 cut(s) 246, 1247, 1327, 1449
Bse3DI GCAATG 1 cut(s) 1184
BseAI TCCGGA 1 cut(s) 838
BseBI CCWGG 8 cut(s) 103, 269, 332, 1047, 1203, 1371, 1530, 1856
BseDI CCNNGG 4 cut(s) 194, 268, 1202, 1855
BseGI GGATG 6 cut(s) 164, 173, 919, 1084, 1210, 1513
BseLI CCNNNNNNNGG 2 cut(s) 899, 1316
BseMI GCAATG 1 cut(s) 1184
BseMII CTCAG 5 cut(s) 672, 1185, 1227, 1473, 1749
BseNI ACTGG 4 cut(s) 246, 1247, 1327, 1449
BseSI GKGCMC 1 cut(s) 1246
BseXI GCAGC 9 cut(s) 47, 223, 276, 727, 864, 1162, 1455, 1545, 1609
BsgI GTGCAG 3 cut(s) 222, 488, 1161
Bsh1236I CGCG 2 cut(s) 124, 618
BshFI GGCC 4 cut(s) 193, 273, 646, 1714
BsiHKAI GWGCWC 2 cut(s) 1246, 1854
BsiSI CCGG 4 cut(s) 664, 839, 1259, 1669
BslFI GGGAC 3 cut(s) 916, 1776, 1880
BslI CCNNNNNNNGG 2 cut(s) 899, 1316
BsmAI GTCTC 3 cut(s) 86, 307, 486
BsmFI GGGAC 3 cut(s) 916, 1776, 1880
BsmI GAATGC 1 cut(s) 233
BsnI GGCC 4 cut(s) 193, 273, 646, 1714
Bso31I GGTCTC 1 cut(s) 307
Bsp1286I GDGCHC 3 cut(s) 1246, 1815, 1854
Bsp13I TCCGGA 1 cut(s) 838
Bsp1407I TGTACA 1 cut(s) 1639
Bsp143I GATC 7 cut(s) 253, 355, 486, 569, 1325, 1525, 1675
Bsp68I TCGCGA 1 cut(s) 618
BspACI CCGC 5 cut(s) 718, 946, 1088, 1262, 1379
BspANI GGCC 4 cut(s) 193, 273, 646, 1714
BspCNI CTCAG 5 cut(s) 673, 1184, 1228, 1474, 1750
BspEI TCCGGA 1 cut(s) 838
BspFNI CGCG 2 cut(s) 124, 618
BspLI GGNNCC 1 cut(s) 881
BspMAI CTGCAG 1 cut(s) 266
BspMI ACCTGC 2 cut(s) 607, 1156
BspPI GGATC 4 cut(s) 363, 1333, 1520, 1683
BspTI CTTAAG 1 cut(s) 221
BspTNI GGTCTC 1 cut(s) 307
BsrDI GCAATG 1 cut(s) 1184
BsrFI RCCGGY 1 cut(s) 1258
BsrGI TGTACA 1 cut(s) 1639
BsrI ACTGG 4 cut(s) 246, 1247, 1327, 1449
BssAI RCCGGY 1 cut(s) 1258
BssECI CCNNGG 4 cut(s) 194, 268, 1202, 1855
BssMI GATC 7 cut(s) 253, 355, 486, 569, 1325, 1525, 1675
Bst2UI CCWGG 8 cut(s) 103, 269, 332, 1047, 1203, 1371, 1530, 1856
Bst4CI ACNGT 5 cut(s) 398, 586, 907, 1182, 1733
Bst6I CTCTTC 1 cut(s) 263
BstAFI CTTAAG 1 cut(s) 221
BstAUI TGTACA 1 cut(s) 1639
BstC8I GCNNGC 4 cut(s) 755, 1708, 1712, 1782
BstDEI CTNAG 5 cut(s) 681, 1171, 1236, 1482, 1758
BstENI CCTNNNNNAGG 2 cut(s) 897, 1314
BstF5I GGATG 6 cut(s) 164, 173, 919, 1084, 1210, 1513
BstFNI CGCG 2 cut(s) 124, 618
BstH2I RGCGCY 1 cut(s) 1637
BstHHI GCGC 1 cut(s) 1636
BstKTI GATC 7 cut(s) 256, 358, 489, 572, 1328, 1528, 1678
BstMAI GTCTC 3 cut(s) 86, 307, 486
BstMBI GATC 7 cut(s) 253, 355, 486, 569, 1325, 1525, 1675
BstMWI GCNNNNNNNGC 4 cut(s) 270, 1271, 1631, 1734
BstNI CCWGG 8 cut(s) 103, 269, 332, 1047, 1203, 1371, 1530, 1856
BstNSI RCATGY 2 cut(s) 917, 1562
BstSCI CCNGG 9 cut(s) 101, 267, 330, 663, 1045, 1201, 1369, 1528, 1854
BstSFI CTRYAG 3 cut(s) 262, 1353, 1732
BstSLI GKGCMC 1 cut(s) 1246
BstUI CGCG 2 cut(s) 124, 618
BstV1I GCAGC 9 cut(s) 47, 223, 276, 727, 864, 1162, 1455, 1545, 1609
BstV2I GAAGAC 2 cut(s) 816, 1746
BstX2I RGATCY 4 cut(s) 355, 569, 1325, 1525
BstXI CCANNNNNNTGG 1 cut(s) 399
BstYI RGATCY 4 cut(s) 355, 569, 1325, 1525
BsuI GTATCC 2 cut(s) 679, 733
BsuRI GGCC 4 cut(s) 193, 273, 646, 1714
BtgZI GCGATG 1 cut(s) 138
BtsCI GGATG 6 cut(s) 164, 173, 919, 1084, 1210, 1513
BtsIMutI CAGTG 3 cut(s) 60, 239, 582
BtuMI TCGCGA 1 cut(s) 618
BveI ACCTGC 2 cut(s) 607, 1156
Cac8I GCNNGC 4 cut(s) 755, 1708, 1712, 1782
CfoI GCGC 1 cut(s) 1636
Cfr10I RCCGGY 1 cut(s) 1258
Cfr13I GGNCC 1 cut(s) 271
CsiI ACCWGGT 1 cut(s) 330
Csp6I GTAC 5 cut(s) 604, 1050, 1374, 1562, 1640
CspCI CAANNNNNGTGG 2 cut(s) 1014, 1049
CviAII CATG 6 cut(s) 14, 914, 1103, 1559, 1580, 1870
CviQI GTAC 5 cut(s) 604, 1050, 1374, 1562, 1640
DdeI CTNAG 5 cut(s) 681, 1171, 1236, 1482, 1758
DpnI GATC 7 cut(s) 255, 357, 488, 571, 1327, 1527, 1677
DpnII GATC 7 cut(s) 253, 355, 486, 569, 1325, 1525, 1675
EaeI YGGCCR 1 cut(s) 644
Eam1104I CTCTTC 1 cut(s) 263
EarI CTCTTC 1 cut(s) 263
EciI GGCGGA 1 cut(s) 1077
Ecl136II GAGCTC 1 cut(s) 1852
Eco147I AGGCCT 1 cut(s) 1714
Eco24I GRGCYC 2 cut(s) 1815, 1854
Eco31I GGTCTC 1 cut(s) 307
Eco53kI GAGCTC 1 cut(s) 1852
Eco57I CTGAAG 2 cut(s) 51, 972
EcoICRI GAGCTC 1 cut(s) 1852
EcoNI CCTNNNNNAGG 2 cut(s) 897, 1314
EcoRI GAATTC 2 cut(s) 65, 1684
EcoRII CCWGG 8 cut(s) 101, 267, 330, 1045, 1201, 1369, 1528, 1854
EcoT22I ATGCAT 1 cut(s) 1843
EcoT38I GRGCYC 2 cut(s) 1815, 1854
FaeI CATG 6 cut(s) 17, 917, 1106, 1562, 1583, 1873
FaqI GGGAC 3 cut(s) 916, 1776, 1880
FatI CATG 6 cut(s) 13, 913, 1102, 1558, 1579, 1869
FblI GTMKAC 1 cut(s) 536
FokI GGATG 6 cut(s) 151, 160, 906, 1071, 1197, 1520
FriOI GRGCYC 2 cut(s) 1815, 1854
FspBI CTAG 4 cut(s) 215, 363, 1416, 1912
GlaI GCGC 1 cut(s) 1635
GsuI CTGGAG 4 cut(s) 263, 1432, 1744, 1838
HaeII RGCGCY 1 cut(s) 1637
HaeIII GGCC 4 cut(s) 193, 273, 646, 1714
HapII CCGG 4 cut(s) 664, 839, 1259, 1669
HhaI GCGC 1 cut(s) 1636
Hin1II CATG 6 cut(s) 17, 917, 1106, 1562, 1583, 1873
Hin6I GCGC 1 cut(s) 1634
HinP1I GCGC 1 cut(s) 1634
HinfI GANTC 7 cut(s) 98, 106, 247, 478, 1118, 1207, 1544
HpaII CCGG 4 cut(s) 664, 839, 1259, 1669
Hpy166II GTNNAC 6 cut(s) 140, 344, 537, 729, 1244, 1599
Hpy188I TCNGA 9 cut(s) 31, 312, 483, 491, 793, 805, 1021, 1237, 1759
Hpy188III TCNNGA 9 cut(s) 251, 504, 617, 633, 839, 1329, 1463, 1723, 1888
Hpy8I GTNNAC 6 cut(s) 140, 344, 537, 729, 1244, 1599
Hpy99I CGWCG 1 cut(s) 1059
HpyAV CCTTC 5 cut(s) 996, 1014, 1152, 1224, 1583
HpyCH4III ACNGT 5 cut(s) 398, 586, 907, 1182, 1733
HpyCH4V TGCA 9 cut(s) 239, 264, 434, 469, 715, 1178, 1244, 1286, 1841
HpyF10VI GCNNNNNNNGC 4 cut(s) 270, 1271, 1631, 1734
HpyF3I CTNAG 5 cut(s) 681, 1171, 1236, 1482, 1758
Hsp92II CATG 6 cut(s) 17, 917, 1106, 1562, 1583, 1873
HspAI GCGC 1 cut(s) 1634
Kpn2I TCCGGA 1 cut(s) 838
Kzo9I GATC 7 cut(s) 253, 355, 486, 569, 1325, 1525, 1675
LmnI GCTCC 4 cut(s) 1451, 1663, 1725, 1857
Lsp1109I GCAGC 9 cut(s) 47, 223, 276, 727, 864, 1162, 1455, 1545, 1609
LweI GCATC 6 cut(s) 14, 421, 1609, 1778, 1806, 1828
MabI ACCWGGT 1 cut(s) 330
MaeI CTAG 4 cut(s) 215, 363, 1416, 1912
MaeIII GTNAC 7 cut(s) 326, 558, 580, 895, 1519, 1698, 1859
MalI GATC 7 cut(s) 255, 357, 488, 571, 1327, 1527, 1677
MboI GATC 7 cut(s) 253, 355, 486, 569, 1325, 1525, 1675
MboII GAAGA 5 cut(s) 250, 496, 713, 816, 1746
MflI RGATCY 4 cut(s) 355, 569, 1325, 1525
MhlI GDGCHC 3 cut(s) 1246, 1815, 1854
MlsI TGGCCA 1 cut(s) 646
MluNI TGGCCA 1 cut(s) 646
MlyI GAGTC 2 cut(s) 100, 1216
MmeI TCCRAC 3 cut(s) 380, 935, 1317
Mox20I TGGCCA 1 cut(s) 646
Mph1103I ATGCAT 1 cut(s) 1843
MroI TCCGGA 1 cut(s) 838
MscI TGGCCA 1 cut(s) 646
MseI TTAA 7 cut(s) 210, 222, 873, 1338, 1605, 1649, 1883
MslI CAYNNNNRTG 1 cut(s) 734
Msp20I TGGCCA 1 cut(s) 646
MspA1I CMGCKG 3 cut(s) 718, 746, 1175
MspCI CTTAAG 1 cut(s) 221
MspI CCGG 4 cut(s) 664, 839, 1259, 1669
MspR9I CCNGG 9 cut(s) 103, 269, 332, 665, 1047, 1203, 1371, 1530, 1856
Mva1269I GAATGC 1 cut(s) 233
MvaI CCWGG 8 cut(s) 103, 269, 332, 1047, 1203, 1371, 1530, 1856
MvnI CGCG 2 cut(s) 124, 618
MwoI GCNNNNNNNGC 4 cut(s) 270, 1271, 1631, 1734
NciI CCSGG 1 cut(s) 665
NdeII GATC 7 cut(s) 253, 355, 486, 569, 1325, 1525, 1675
NlaIII CATG 6 cut(s) 17, 917, 1106, 1562, 1583, 1873
NlaIV GGNNCC 1 cut(s) 881
NmeAIII GCCGAG 1 cut(s) 219
NmuCI GTSAC 4 cut(s) 326, 580, 1519, 1698
NruI TCGCGA 1 cut(s) 618
NsiI ATGCAT 1 cut(s) 1843
NspI RCATGY 2 cut(s) 917, 1562
OliI CACNNNNGTG 1 cut(s) 734
PaqCI CACCTGC 1 cut(s) 1156
PceI AGGCCT 1 cut(s) 1714
PciI ACATGT 1 cut(s) 1558
PctI GAATGC 1 cut(s) 233
PfeI GAWTC 5 cut(s) 98, 247, 478, 1118, 1544
PfoI TCCNGGA 1 cut(s) 101
PleI GAGTC 2 cut(s) 100, 1215
PpsI GAGTC 2 cut(s) 100, 1215
PscI ACATGT 1 cut(s) 1558
Psp124BI GAGCTC 1 cut(s) 1854
Psp6I CCWGG 8 cut(s) 101, 267, 330, 1045, 1201, 1369, 1528, 1854
PspGI CCWGG 8 cut(s) 101, 267, 330, 1045, 1201, 1369, 1528, 1854
PspN4I GGNNCC 1 cut(s) 881
PspPI GGNCC 1 cut(s) 271
PstI CTGCAG 1 cut(s) 266
PsuI RGATCY 4 cut(s) 355, 569, 1325, 1525
PvuII CAGCTG 2 cut(s) 746, 1175
RruI TCGCGA 1 cut(s) 618
RsaI GTAC 5 cut(s) 605, 1051, 1375, 1563, 1641
RsaNI GTAC 5 cut(s) 604, 1050, 1374, 1562, 1640
RseI CAYNNNNRTG 1 cut(s) 734
SacI GAGCTC 1 cut(s) 1854
SaqAI TTAA 7 cut(s) 210, 222, 873, 1338, 1605, 1649, 1883
Sau3AI GATC 7 cut(s) 253, 355, 486, 569, 1325, 1525, 1675
Sau96I GGNCC 1 cut(s) 271
SchI GAGTC 2 cut(s) 100, 1216
ScrFI CCNGG 9 cut(s) 103, 269, 332, 665, 1047, 1203, 1371, 1530, 1856
SduI GDGCHC 3 cut(s) 1246, 1815, 1854
SexAI ACCWGGT 1 cut(s) 330
SfaNI GCATC 6 cut(s) 14, 421, 1609, 1778, 1806, 1828
SfcI CTRYAG 3 cut(s) 262, 1353, 1732
SmiMI CAYNNNNRTG 1 cut(s) 734
SmlI CTYRAG 2 cut(s) 221, 940
SmoI CTYRAG 2 cut(s) 221, 940
SseBI AGGCCT 1 cut(s) 1714
SsiI CCGC 5 cut(s) 718, 946, 1088, 1262, 1379
SspI AATATT 1 cut(s) 1424
SspMI CTAG 4 cut(s) 215, 363, 1416, 1912
SstI GAGCTC 1 cut(s) 1854
StuI AGGCCT 1 cut(s) 1714
StyD4I CCNGG 9 cut(s) 101, 267, 330, 663, 1045, 1201, 1369, 1528, 1854
TaaI ACNGT 5 cut(s) 398, 586, 907, 1182, 1733
TaqI TCGA 3 cut(s) 182, 518, 1682
TaqII GACCGA 1 cut(s) 1740
TatI WGTACW 1 cut(s) 1639
TauI GCSGC 2 cut(s) 949, 1265
TfiI GAWTC 5 cut(s) 98, 247, 478, 1118, 1544
Tru1I TTAA 7 cut(s) 210, 222, 873, 1338, 1605, 1649, 1883
Tru9I TTAA 7 cut(s) 210, 222, 873, 1338, 1605, 1649, 1883
TscAI CASTG 3 cut(s) 67, 246, 589
TseFI GTSAC 4 cut(s) 326, 580, 1519, 1698
TseI GCWGC 9 cut(s) 35, 236, 264, 715, 852, 1175, 1443, 1533, 1622
Tsp45I GTSAC 4 cut(s) 326, 580, 1519, 1698
TspDTI ATGAA 5 cut(s) 618, 1097, 1425, 1794, 1886
TspRI CASTG 3 cut(s) 67, 246, 589
Vha464I CTTAAG 1 cut(s) 221
VneI GTGCAC 1 cut(s) 1242
XagI CCTNNNNNAGG 2 cut(s) 897, 1314
XapI RAATTY 7 cut(s) 65, 419, 499, 639, 1303, 1684, 1693
XceI RCATGY 2 cut(s) 917, 1562
XmiI GTMKAC 1 cut(s) 536
XspI CTAG 4 cut(s) 215, 363, 1416, 1912
Zsp2I ATGCAT 1 cut(s) 1843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.