Rh2AG276000

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0005035
Physical Location & Seq
Reverse (-)
33072124 .. 33076693
4570 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG276000.1

Sequence Viewer

Length: 2037 bp
ATGCTTTGGTTGTTTTGCAGTGGAGTGAATAAAACTGGAGTCTTGCTAGGATCAATCAATTGGGTGATTTTCTTAAAAGGGTACGTGCCGATTATATATATTTTTGACATTATGGCATCTTCTCATGGTAATAATACTCACTCTGAAGCAGCAATGAAGGAACAAATAATCACTGAATTCTATGCTAAAAGTCTTCACATAATTCTCGAGTCGAGGACCCCATATGTGTCCTCAAGAAATTATAGTGGCGAACAAGCCTTGTCGTCGCCATCATCTTCCTCTTCGTCCTCCTCGAGTGTGAGGCCGAGGGATAAGTGGTTTAATTTAGCTCTAAGAGAATGCCCTGCTGCGCTGGAGAATCTTGATCTCTGGCGCCAGAGCAATTTTGAACCTATGGTGGTTGATGTGGTTTTGGTCCAGAGACGACTTGTTAGTGACCCGGTGGAATGTTCACCTAGAAGGGATCTTGCTAGGAACTTGTCATTGAAAGAGCGGTATCCATACTGTTGGAATTATGAGCAGGAAGATTTTTGGTGTGAGGCAAAGAGTGAAAAGATTATAGAGAGATGGGTACTGCAGTATGATACTCGCAAGACTAGAGATACAAAATCAGGGAGTAGGAGGTCGAGCAATAATCCTTTACAGATGTTGTATAAGAAATCAATATTACTCTTGAGGTCTTTGTATGTTACTGTTAGGCTTTTGCCTGCTTATAAAATTTATCGTGACCTCAATTCGTCTGGCCAAATTCTTCCATTTACTCTTGCTCACCGGGTGGCCTCTTTTGCTGAGCCCTTCACATGTAGAGAAGATGCAGAAATGCAGCGGTTTGAGTTTACCCCTGTGGATACGGCTTGTGGTAGGCTTTGCCTTTCAGTGTTGTATTGTTCATCACTTTCAGATGTAAGCTCTGAACCATCGACTCCTATGTCTCCACAAGTTATACCAGACTATGTTGGGAGCCCATTGGCAGACCCGCTTAAAAGGTTCCCATCCCTTCCTGTGACAGGATCATTATCACGTGCCACTCCATTATCGTCTTCATTCTCGAGGCGTCATAGTTGGAGTTATGACCATGGTACAGATTCACCACCTTCAGTTTCTTTCTCACCTTCGCCTACGCGTTCAGAACCTCATGCTTCAATTTCTAACCCAAGGTCTCGCCATTTCCCACCCACAAGCTTACCACGTTATCCGCCTGAAACATCTCTTGATTATAAGAAGGATATAGGTTTTTATGAGTATTGTCCTTCACCTGGCTTTTCTCCCGCACTGTCGCCATCAGCCTCTCCATCATTGCCAATCTCTATTCCTGGCAATCATGTTTCAAAGAATCTGTTACGATCTGAGAGTGCACCATTCAGTGCCCCAGTGGCCAAACGTGCTAATTCCCCTGCATCATCCCAGAAGCTAAATTTTCCTCCATCTCCCCCCCTTACGAGTACAAGTTCTGGTACTTTTAAGACTGATAAAGCTACAGTTGGGACATCAGTTGAAAAGTTATTCTCTTTTGGGAAAGGGGAGTCTAGACAATGTTCTGGGCTTAAGATATCATCAGGCGGCTCACCGCAGATATCCTTTTCCAGAAGCTCCACTAGGTCTTTTCCTGATGATTTTGATGATTCGGAGTATCCTTGCCCGTTTGATTATGATGATGATGTGACAGACCCTGGTAGCAGACCTGAATCCTTTGACCAAAGGCATGAGCCTGGAGGATTATTTCCAATTAAAAAATCCCAAGATGCTGCTGTTGGCGCGCTTGTAAGAATGCTAAAGAAAGCCCCACCTCTTCGGCAAGATGTCTCAGATTCAGTAAGTTTGTCACAAGGCTGCAGGCCTGAAATGTGGAGTAATAGTAAACAAGAGGCCAATCTTTCTTCTGAGAGTCAGGCACCAGTTCAGCCTGCTGATTCCTCAAGAGTTATATCGTCAGGGCTCATAACATCAAAAACTACAGCTGATGCCTTAGAAGAGCTCCAAAGTTACAGGGATATAAAAAACTCGTTACTGGCGCAAAGTAGTAAGTCTCACATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04140 ko04211 map04136 map04138 map04140 map04211
Pfam Domains
Protein Families
ATG13

Protein Analysis

678

Amino Acids

75.17

Weight (kDa)

8.53

Isoelectric Point (pI)

72.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATG13 PF10033 57 - 296 1.9e-41 Autophagy-related protein 13
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 714, 1218
AasI GACNNNNNNGTC 1 cut(s) 928
AccB1I GGYRCC 2 cut(s) 372, 1891
AccBSI CCGCTC 1 cut(s) 493
AccII CGCG 2 cut(s) 1123, 1757
AciI CCGC 7 cut(s) 493, 826, 977, 1196, 1269, 1560, 1568
AclWI GGATC 3 cut(s) 58, 471, 1018
AcoI YGGCCR 2 cut(s) 742, 1374
AcsI RAATTY 4 cut(s) 176, 717, 747, 1414
AcuI CTGAAG 2 cut(s) 165, 1080
AcvI CACGTG 1 cut(s) 1022
AcyI GRCGYC 2 cut(s) 373, 1054
AdeI CACNNNGTG 1 cut(s) 775
AfaI GTAC 5 cut(s) 83, 573, 1081, 1444, 1456
AfiI CCNNNNNNNGG 2 cut(s) 1007, 1256
AflII CTTAAG 1 cut(s) 1544
AflIII ACRYGT 3 cut(s) 800, 1121, 2031
AgsI TTSAA 5 cut(s) 389, 487, 1143, 1329, 1496
AjnI CCWGG 4 cut(s) 1255, 1312, 1669, 1708
AluBI AGCT 8 cut(s) 329, 909, 1182, 1411, 1475, 1590, 1958, 1975
AluI AGCT 8 cut(s) 329, 909, 1182, 1411, 1475, 1590, 1958, 1975
Alw21I GWGCWC 2 cut(s) 1357, 1977
Alw26I GTCTC 5 cut(s) 415, 936, 1164, 1807, 2031
Alw44I GTGCAC 1 cut(s) 1353
AlwI GGATC 3 cut(s) 58, 471, 1018
AlwNI CAGNNNCTG 1 cut(s) 1670
Ama87I CYCGRG 3 cut(s) 206, 292, 1048
AoxI GGCC 6 cut(s) 302, 742, 777, 1374, 1835, 1866
ApaLI GTGCAC 1 cut(s) 1353
ApeKI GCWGC 5 cut(s) 149, 347, 823, 1745, 1830
ApoI RAATTY 4 cut(s) 176, 717, 747, 1414
AspLEI GCGC 5 cut(s) 352, 375, 1757, 1759, 2014
AspS9I GGNCC 2 cut(s) 216, 415
AsuC2I CCSGG 2 cut(s) 440, 773
AsuHPI GGTGA 7 cut(s) 76, 444, 761, 1080, 1101, 1245, 1557
AvaI CYCGRG 3 cut(s) 206, 292, 1048
AvaII GGWCC 2 cut(s) 216, 415
BaeGI GKGCMC 2 cut(s) 1357, 1369
BaeI ACNNNNGTAYC 2 cut(s) 563, 596
BalI TGGCCA 2 cut(s) 744, 1376
BanI GGYRCC 2 cut(s) 372, 1891
BanII GRGCYC 4 cut(s) 795, 965, 1938, 1977
BbrPI CACGTG 1 cut(s) 1022
BbsI GAAGAC 2 cut(s) 185, 1032
Bbv12I GWGCWC 2 cut(s) 1357, 1977
BbvI GCAGC 5 cut(s) 161, 334, 835, 1732, 1817
BccI CCATC 7 cut(s) 277, 561, 925, 1000, 1288, 1300, 1432
BceAI ACGGC 1 cut(s) 867
BciT130I CCWGG 4 cut(s) 1257, 1314, 1671, 1710
BciVI GTATCC 3 cut(s) 507, 841, 1641
BcnI CCSGG 2 cut(s) 440, 773
BcoDI GTCTC 5 cut(s) 415, 936, 1164, 1807, 2031
BfaI CTAG 6 cut(s) 47, 456, 471, 597, 1527, 1596
BfmI CTRYAG 4 cut(s) 575, 1476, 1831, 1953
BfoI RGCGCY 1 cut(s) 376
BfrI CTTAAG 1 cut(s) 1544
BfuI GTATCC 3 cut(s) 507, 841, 1641
BglI GCCNNNNNGGC 1 cut(s) 1373
BisI GCNGC 6 cut(s) 150, 348, 824, 1561, 1746, 1831
BlpI GCTNAGC 1 cut(s) 789
BlsI GCNGC 6 cut(s) 151, 349, 825, 1562, 1747, 1832
Bme1390I CCNGG 6 cut(s) 440, 773, 1257, 1314, 1671, 1710
Bme18I GGWCC 2 cut(s) 216, 415
BmeT110I CYCGRG 3 cut(s) 206, 292, 1048
BmgT120I GGNCC 2 cut(s) 216, 415
BmiI GGNNCC 5 cut(s) 218, 374, 962, 989, 1893
BmrFI CCNGG 6 cut(s) 440, 773, 1257, 1314, 1671, 1710
BmrI ACTGGG 1 cut(s) 1364
BmsI GCATC 5 cut(s) 125, 802, 1406, 1732, 1951
BmuI ACTGGG 1 cut(s) 1364
BpiI GAAGAC 2 cut(s) 185, 1032
BpmI CTGGAG 3 cut(s) 57, 374, 1731
Bpu1102I GCTNAGC 1 cut(s) 789
BpuEI CTTGAG 3 cut(s) 217, 694, 1900
BpuMI CCSGG 2 cut(s) 440, 773
BsaAI YACGTR 2 cut(s) 85, 1022
BsaBI GATNNNNATC 1 cut(s) 1015
BsaHI GRCGYC 2 cut(s) 373, 1054
BsaI GGTCTC 1 cut(s) 1164
BsaJI CCNNGG 4 cut(s) 305, 1075, 1154, 1669
BsaXI ACNNNNNCTCC 2 cut(s) 1840, 1870
Bsc4I CCNNNNNNNGG 2 cut(s) 1007, 1256
Bse1I ACTGG 4 cut(s) 40, 1370, 1895, 2013
Bse3DI GCAATG 2 cut(s) 159, 1295
Bse8I GATNNNNATC 1 cut(s) 1015
BseBI CCWGG 4 cut(s) 1257, 1314, 1671, 1710
BseDI CCNNGG 4 cut(s) 305, 1075, 1154, 1669
BseGI GGATG 2 cut(s) 992, 1400
BseJI GATNNNNATC 1 cut(s) 1015
BseLI CCNNNNNNNGG 2 cut(s) 1007, 1256
BseMI GCAATG 2 cut(s) 159, 1295
BseMII CTCAG 4 cut(s) 780, 1338, 1818, 1872
BseNI ACTGG 4 cut(s) 40, 1370, 1895, 2013
BsePI GCGCGC 1 cut(s) 1755
BseRI GAGGAG 1 cut(s) 280
BseSI GKGCMC 2 cut(s) 1357, 1369
BseXI GCAGC 5 cut(s) 161, 334, 835, 1732, 1817
Bsh1236I CGCG 2 cut(s) 1123, 1757
BshFI GGCC 6 cut(s) 304, 744, 779, 1376, 1837, 1868
BshNI GGYRCC 2 cut(s) 372, 1891
BsiHKAI GWGCWC 2 cut(s) 1357, 1977
BsiHKCI CYCGRG 3 cut(s) 206, 292, 1048
BsiSI CCGG 2 cut(s) 440, 772
BslFI GGGAC 1 cut(s) 1498
BslI CCNNNNNNNGG 2 cut(s) 1007, 1256
BsmAI GTCTC 5 cut(s) 415, 936, 1164, 1807, 2031
BsmBI CGTCTC 1 cut(s) 415
BsmFI GGGAC 1 cut(s) 1498
BsmI GAATGC 2 cut(s) 344, 1773
BsnI GGCC 6 cut(s) 304, 744, 779, 1376, 1837, 1868
Bso31I GGTCTC 1 cut(s) 1164
BsoBI CYCGRG 3 cut(s) 206, 292, 1048
Bsp1286I GDGCHC 6 cut(s) 795, 965, 1357, 1369, 1938, 1977
Bsp143I GATC 5 cut(s) 50, 364, 463, 1010, 1343
Bsp1720I GCTNAGC 1 cut(s) 789
Bsp19I CCATGG 1 cut(s) 1075
BspACI CCGC 7 cut(s) 493, 826, 977, 1196, 1269, 1560, 1568
BspANI GGCC 6 cut(s) 304, 744, 779, 1376, 1837, 1868
BspCNI CTCAG 4 cut(s) 781, 1339, 1817, 1873
BspFNI CGCG 2 cut(s) 1123, 1757
BspLI GGNNCC 5 cut(s) 218, 374, 962, 989, 1893
BspMAI CTGCAG 2 cut(s) 579, 1835
BspPI GGATC 3 cut(s) 58, 471, 1018
BspQI GCTCTTC 1 cut(s) 1965
BspT107I GGYRCC 2 cut(s) 372, 1891
BspTI CTTAAG 1 cut(s) 1544
BspTNI GGTCTC 1 cut(s) 1164
BsrBI CCGCTC 1 cut(s) 493
BsrDI GCAATG 2 cut(s) 159, 1295
BsrI ACTGG 4 cut(s) 40, 1370, 1895, 2013
BssECI CCNNGG 4 cut(s) 305, 1075, 1154, 1669
BssHII GCGCGC 1 cut(s) 1755
BssMI GATC 5 cut(s) 50, 364, 463, 1010, 1343
BssNI GRCGYC 2 cut(s) 373, 1054
BssT1I CCWWGG 2 cut(s) 1075, 1154
Bst2UI CCWGG 4 cut(s) 1257, 1314, 1671, 1710
Bst4CI ACNGT 4 cut(s) 506, 694, 1275, 1480
Bst6I CTCTTC 3 cut(s) 286, 1794, 1965
BstACI GRCGYC 2 cut(s) 373, 1054
BstAFI CTTAAG 1 cut(s) 1544
BstBAI YACGTR 2 cut(s) 85, 1022
BstC8I GCNNGC 4 cut(s) 708, 1757, 1835, 1905
BstDEI CTNAG 6 cut(s) 332, 789, 1347, 1804, 1881, 1966
BstDSI CCRYGG 1 cut(s) 1075
BstENI CCTNNNNNAGG 1 cut(s) 1005
BstF5I GGATG 2 cut(s) 992, 1400
BstFNI CGCG 2 cut(s) 1123, 1757
BstH2I RGCGCY 1 cut(s) 376
BstHHI GCGC 5 cut(s) 352, 375, 1757, 1759, 2014
BstKTI GATC 5 cut(s) 53, 367, 466, 1013, 1346
BstMAI GTCTC 5 cut(s) 415, 936, 1164, 1807, 2031
BstMBI GATC 5 cut(s) 50, 364, 463, 1010, 1343
BstMWI GCNNNNNNNGC 4 cut(s) 785, 1373, 1382, 1754
BstNI CCWGG 4 cut(s) 1257, 1314, 1671, 1710
BstNSI RCATGY 2 cut(s) 804, 2035
BstSCI CCNGG 6 cut(s) 438, 771, 1255, 1312, 1669, 1708
BstSFI CTRYAG 4 cut(s) 575, 1476, 1831, 1953
BstSLI GKGCMC 2 cut(s) 1357, 1369
BstUI CGCG 2 cut(s) 1123, 1757
BstV1I GCAGC 5 cut(s) 161, 334, 835, 1732, 1817
BstV2I GAAGAC 2 cut(s) 185, 1032
BstX2I RGATCY 1 cut(s) 463
BstXI CCANNNNNNTGG 1 cut(s) 507
BstYI RGATCY 1 cut(s) 463
BsuI GTATCC 3 cut(s) 507, 841, 1641
BsuRI GGCC 6 cut(s) 304, 744, 779, 1376, 1837, 1868
BtgI CCRYGG 1 cut(s) 1075
BtsCI GGATG 2 cut(s) 992, 1400
BtsI GCAGTG 1 cut(s) 25
BtsIMutI CAGTG 6 cut(s) 25, 171, 882, 1271, 1369, 1377
Cac8I GCNNGC 4 cut(s) 708, 1757, 1835, 1905
CaiI CAGNNNCTG 1 cut(s) 1670
CfoI GCGC 5 cut(s) 352, 375, 1757, 1759, 2014
Cfr13I GGNCC 2 cut(s) 216, 415
CseI GACGC 1 cut(s) 1043
Csp6I GTAC 5 cut(s) 82, 572, 1080, 1443, 1455
CviAII CATG 7 cut(s) 125, 801, 1076, 1136, 1322, 1703, 2032
CviQI GTAC 5 cut(s) 82, 572, 1080, 1443, 1455
DdeI CTNAG 6 cut(s) 332, 789, 1347, 1804, 1881, 1966
DinI GGCGCC 1 cut(s) 374
DpnI GATC 5 cut(s) 52, 366, 465, 1012, 1345
DpnII GATC 5 cut(s) 50, 364, 463, 1010, 1343
DraIII CACNNNGTG 1 cut(s) 775
DrdI GACNNNNNNGTC 1 cut(s) 928
DseDI GACNNNNNNGTC 1 cut(s) 928
EaeI YGGCCR 2 cut(s) 742, 1374
Eam1104I CTCTTC 3 cut(s) 286, 1794, 1965
EarI CTCTTC 3 cut(s) 286, 1794, 1965
EciI GGCGGA 1 cut(s) 1185
Ecl136II GAGCTC 1 cut(s) 1975
Eco130I CCWWGG 2 cut(s) 1075, 1154
Eco147I AGGCCT 1 cut(s) 1837
Eco24I GRGCYC 4 cut(s) 795, 965, 1938, 1977
Eco31I GGTCTC 1 cut(s) 1164
Eco32I GATATC 2 cut(s) 1551, 1575
Eco47I GGWCC 2 cut(s) 216, 415
Eco53kI GAGCTC 1 cut(s) 1975
Eco57I CTGAAG 2 cut(s) 165, 1080
Eco72I CACGTG 1 cut(s) 1022
Eco88I CYCGRG 3 cut(s) 206, 292, 1048
EcoICRI GAGCTC 1 cut(s) 1975
EcoNI CCTNNNNNAGG 1 cut(s) 1005
EcoO109I RGGNCCY 1 cut(s) 216
EcoRI GAATTC 1 cut(s) 176
EcoRII CCWGG 4 cut(s) 1255, 1312, 1669, 1708
EcoRV GATATC 2 cut(s) 1551, 1575
EcoT14I CCWWGG 2 cut(s) 1075, 1154
EcoT38I GRGCYC 4 cut(s) 795, 965, 1938, 1977
EgeI GGCGCC 1 cut(s) 374
EheI GGCGCC 1 cut(s) 374
ErhI CCWWGG 2 cut(s) 1075, 1154
Esp3I CGTCTC 1 cut(s) 415
FaeI CATG 7 cut(s) 128, 804, 1079, 1139, 1325, 1706, 2035
FaqI GGGAC 1 cut(s) 1498
FatI CATG 7 cut(s) 124, 800, 1075, 1135, 1321, 1702, 2031
FauI CCCGC 2 cut(s) 984, 1276
FauNDI CATATG 1 cut(s) 223
Fnu4HI GCNGC 6 cut(s) 150, 348, 824, 1561, 1746, 1831
FokI GGATG 2 cut(s) 979, 1387
FriOI GRGCYC 4 cut(s) 795, 965, 1938, 1977
Fsp4HI GCNGC 6 cut(s) 150, 348, 824, 1561, 1746, 1831
FspBI CTAG 6 cut(s) 47, 456, 471, 597, 1527, 1596
GlaI GCGC 5 cut(s) 351, 374, 1756, 1758, 2013
GluI GCNGC 6 cut(s) 150, 348, 824, 1561, 1746, 1831
GsuI CTGGAG 3 cut(s) 57, 374, 1731
HaeII RGCGCY 1 cut(s) 376
HaeIII GGCC 6 cut(s) 304, 744, 779, 1376, 1837, 1868
HapII CCGG 2 cut(s) 440, 772
HgaI GACGC 1 cut(s) 1043
HhaI GCGC 5 cut(s) 352, 375, 1757, 1759, 2014
Hin1I GRCGYC 2 cut(s) 373, 1054
Hin1II CATG 7 cut(s) 128, 804, 1079, 1139, 1325, 1706, 2035
Hin6I GCGC 5 cut(s) 350, 373, 1755, 1757, 2012
HinP1I GCGC 5 cut(s) 350, 373, 1755, 1757, 2012
HindIII AAGCTT 1 cut(s) 1180
HpaII CCGG 2 cut(s) 440, 772
HphI GGTGA 7 cut(s) 76, 444, 761, 1080, 1101, 1245, 1557
Hpy166II GTNNAC 4 cut(s) 452, 837, 1355, 1859
Hpy188I TCNGA 8 cut(s) 145, 901, 913, 1129, 1348, 1627, 1807, 1882
Hpy8I GTNNAC 4 cut(s) 452, 837, 1355, 1859
Hpy99I CGWCG 1 cut(s) 268
HpyAV CCTTC 8 cut(s) 151, 453, 805, 1007, 1104, 1122, 1216, 1260
HpyCH4III ACNGT 4 cut(s) 506, 694, 1275, 1480
HpyCH4IV ACGT 4 cut(s) 84, 1021, 1189, 1381
HpyCH4V TGCA 7 cut(s) 18, 577, 815, 823, 1355, 1397, 1833
HpyF10VI GCNNNNNNNGC 4 cut(s) 785, 1373, 1382, 1754
HpyF3I CTNAG 6 cut(s) 332, 789, 1347, 1804, 1881, 1966
HpySE526I ACGT 4 cut(s) 84, 1021, 1189, 1381
Hsp92I GRCGYC 2 cut(s) 373, 1054
Hsp92II CATG 7 cut(s) 128, 804, 1079, 1139, 1325, 1706, 2035
HspAI GCGC 5 cut(s) 350, 373, 1755, 1757, 2012
KasI GGCGCC 1 cut(s) 372
Kzo9I GATC 5 cut(s) 50, 364, 463, 1010, 1343
LguI GCTCTTC 1 cut(s) 1965
LmnI GCTCC 3 cut(s) 960, 1595, 1980
Lsp1109I GCAGC 5 cut(s) 161, 334, 835, 1732, 1817
LweI GCATC 5 cut(s) 125, 802, 1406, 1732, 1951
MaeI CTAG 6 cut(s) 47, 456, 471, 597, 1527, 1596
MaeII ACGT 4 cut(s) 84, 1021, 1189, 1381
MaeIII GTNAC 9 cut(s) 434, 688, 725, 1003, 1338, 1660, 1821, 1982, 2004
MalI GATC 5 cut(s) 52, 366, 465, 1012, 1345
MbiI CCGCTC 1 cut(s) 493
MboI GATC 5 cut(s) 50, 364, 463, 1010, 1343
MfeI CAATTG 1 cut(s) 58
MflI RGATCY 1 cut(s) 463
MhlI GDGCHC 6 cut(s) 795, 965, 1357, 1369, 1938, 1977
MlsI TGGCCA 2 cut(s) 744, 1376
MluI ACGCGT 1 cut(s) 1121
MluNI TGGCCA 2 cut(s) 744, 1376
Mly113I GGCGCC 1 cut(s) 373
MlyI GAGTC 5 cut(s) 48, 218, 916, 1532, 1894
MmeI TCCRAC 2 cut(s) 488, 1043
Mox20I TGGCCA 2 cut(s) 744, 1376
MscI TGGCCA 2 cut(s) 744, 1376
MseI TTAA 6 cut(s) 74, 321, 981, 1461, 1545, 1728
Msp20I TGGCCA 2 cut(s) 744, 1376
MspA1I CMGCKG 2 cut(s) 826, 1958
MspCI CTTAAG 1 cut(s) 1544
MspI CCGG 2 cut(s) 440, 772
MspR9I CCNGG 6 cut(s) 440, 773, 1257, 1314, 1671, 1710
MunI CAATTG 1 cut(s) 58
Mva1269I GAATGC 2 cut(s) 344, 1773
MvaI CCWGG 4 cut(s) 1257, 1314, 1671, 1710
MvnI CGCG 2 cut(s) 1123, 1757
MwoI GCNNNNNNNGC 4 cut(s) 785, 1373, 1382, 1754
NarI GGCGCC 1 cut(s) 373
NciI CCSGG 2 cut(s) 440, 773
NcoI CCATGG 1 cut(s) 1075
NdeI CATATG 1 cut(s) 223
NdeII GATC 5 cut(s) 50, 364, 463, 1010, 1343
NlaIII CATG 7 cut(s) 128, 804, 1079, 1139, 1325, 1706, 2035
NlaIV GGNNCC 5 cut(s) 218, 374, 962, 989, 1893
NmeAIII GCCGAG 1 cut(s) 330
NmuCI GTSAC 5 cut(s) 434, 725, 1003, 1660, 1821
NspI RCATGY 2 cut(s) 804, 2035
PaeR7I CTCGAG 3 cut(s) 206, 292, 1048
PauI GCGCGC 1 cut(s) 1755
PceI AGGCCT 1 cut(s) 1837
PciI ACATGT 2 cut(s) 800, 2031
PciSI GCTCTTC 1 cut(s) 1965
PcsI WCGNNNNNNNCGW 1 cut(s) 290
PctI GAATGC 2 cut(s) 344, 1773
PfeI GAWTC 7 cut(s) 358, 1085, 1333, 1622, 1685, 1808, 1910
PkrI GCNGC 6 cut(s) 151, 349, 825, 1562, 1747, 1832
PleI GAGTC 5 cut(s) 47, 217, 916, 1531, 1893
PluTI GGCGCC 1 cut(s) 376
PmaCI CACGTG 1 cut(s) 1022
PmlI CACGTG 1 cut(s) 1022
PpsI GAGTC 5 cut(s) 47, 217, 916, 1531, 1893
Ppu21I YACGTR 2 cut(s) 85, 1022
PpuMI RGGWCCY 1 cut(s) 216
PscI ACATGT 2 cut(s) 800, 2031
PsiI TTATAA 2 cut(s) 714, 1218
Psp124BI GAGCTC 1 cut(s) 1977
Psp5II RGGWCCY 1 cut(s) 216
Psp6I CCWGG 4 cut(s) 1255, 1312, 1669, 1708
PspCI CACGTG 1 cut(s) 1022
PspGI CCWGG 4 cut(s) 1255, 1312, 1669, 1708
PspN4I GGNNCC 5 cut(s) 218, 374, 962, 989, 1893
PspPI GGNCC 2 cut(s) 216, 415
PspPPI RGGWCCY 1 cut(s) 216
PspXI VCTCGAGB 1 cut(s) 292
PstI CTGCAG 2 cut(s) 579, 1835
PstNI CAGNNNCTG 1 cut(s) 1670
PsuI RGATCY 1 cut(s) 463
PteI GCGCGC 1 cut(s) 1755
PvuII CAGCTG 1 cut(s) 1958
RsaI GTAC 5 cut(s) 83, 573, 1081, 1444, 1456
RsaNI GTAC 5 cut(s) 82, 572, 1080, 1443, 1455
SacI GAGCTC 1 cut(s) 1977
SapI GCTCTTC 1 cut(s) 1965
SaqAI TTAA 6 cut(s) 74, 321, 981, 1461, 1545, 1728
SatI GCNGC 6 cut(s) 150, 348, 824, 1561, 1746, 1831
Sau3AI GATC 5 cut(s) 50, 364, 463, 1010, 1343
Sau96I GGNCC 2 cut(s) 216, 415
SchI GAGTC 5 cut(s) 48, 218, 916, 1532, 1894
ScrFI CCNGG 6 cut(s) 440, 773, 1257, 1314, 1671, 1710
SduI GDGCHC 6 cut(s) 795, 965, 1357, 1369, 1938, 1977
SfaNI GCATC 5 cut(s) 125, 802, 1406, 1732, 1951
SfcI CTRYAG 4 cut(s) 575, 1476, 1831, 1953
SfoI GGCGCC 1 cut(s) 374
Sfr274I CTCGAG 3 cut(s) 206, 292, 1048
SinI GGWCC 2 cut(s) 216, 415
SlaI CTCGAG 3 cut(s) 206, 292, 1048
SmlI CTYRAG 7 cut(s) 206, 232, 292, 673, 1048, 1544, 1915
SmoI CTYRAG 7 cut(s) 206, 232, 292, 673, 1048, 1544, 1915
SseBI AGGCCT 1 cut(s) 1837
SsiI CCGC 7 cut(s) 493, 826, 977, 1196, 1269, 1560, 1568
SspDI GGCGCC 1 cut(s) 372
SspI AATATT 1 cut(s) 666
SspMI CTAG 6 cut(s) 47, 456, 471, 597, 1527, 1596
SstI GAGCTC 1 cut(s) 1977
StuI AGGCCT 1 cut(s) 1837
StyD4I CCNGG 6 cut(s) 438, 771, 1255, 1312, 1669, 1708
StyI CCWWGG 2 cut(s) 1075, 1154
TaaI ACNGT 4 cut(s) 506, 694, 1275, 1480
TaiI ACGT 4 cut(s) 87, 1024, 1192, 1384
TaqI TCGA 6 cut(s) 207, 212, 293, 626, 920, 1049
TatI WGTACW 1 cut(s) 1442
TauI GCSGC 1 cut(s) 1563
TfiI GAWTC 7 cut(s) 358, 1085, 1333, 1622, 1685, 1808, 1910
Tru1I TTAA 6 cut(s) 74, 321, 981, 1461, 1545, 1728
Tru9I TTAA 6 cut(s) 74, 321, 981, 1461, 1545, 1728
TscAI CASTG 6 cut(s) 25, 178, 882, 1278, 1369, 1377
TseFI GTSAC 5 cut(s) 434, 725, 1003, 1660, 1821
TseI GCWGC 5 cut(s) 149, 347, 823, 1745, 1830
Tsp45I GTSAC 5 cut(s) 434, 725, 1003, 1660, 1821
TspDTI ATGAA 3 cut(s) 170, 879, 1032
TspRI CASTG 6 cut(s) 25, 178, 882, 1278, 1369, 1377
Vha464I CTTAAG 1 cut(s) 1544
VneI GTGCAC 1 cut(s) 1353
VpaK11BI GGWCC 2 cut(s) 216, 415
XagI CCTNNNNNAGG 1 cut(s) 1005
XapI RAATTY 4 cut(s) 176, 717, 747, 1414
XbaI TCTAGA 1 cut(s) 1526
XceI RCATGY 2 cut(s) 804, 2035
XhoI CTCGAG 3 cut(s) 206, 292, 1048
XspI CTAG 6 cut(s) 47, 456, 471, 597, 1527, 1596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.