Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G18770 |
| fragaria_vesca | FvH4_1g23440 FvH4_1g23440 FvH4_1g23440 FvH4_1g23440 |
| malus_domestica | MD01G1001900.v1.1 |
| prunus_persica | Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 |
| pyrus_communis | pycom01g02590 |
| rosa_chinensis | RchiOBHm_Chr2g0118811 |
| rosa_laevigata | RLG00000018422 |
| rosa_multiflora | Rmu_co8044140.1_g000001 Rmu_sc0001814.1_g000017 Rmu_sc0003729.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00124700 Rroxscaffold_2G00125170 |
| rosa_rugosa | Rorug02G0218700 Rorug02G0218800 Rorug02G0218900 Rorug02G0219000 |
| rosa_samantha | Rh2AG276000 Rh2BG287700 Rh2DG282900 Rh2DG302000 |
| rosa_wichuraiana | Rw2G021960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 127 |
| AciI | CCGC | 2 cut(s) | 7, 234 |
| AleI | CACNNNNGTG | 1 cut(s) | 23 |
| AluBI | AGCT | 3 cut(s) | 35, 90, 265 |
| AluI | AGCT | 3 cut(s) | 35, 90, 265 |
| Aor13HI | TCCGGA | 1 cut(s) | 127 |
| ApeKI | GCWGC | 1 cut(s) | 4 |
| AsuHPI | GGTGA | 3 cut(s) | 10, 281, 287 |
| BbsI | GAAGAC | 1 cut(s) | 105 |
| BbvI | GCAGC | 1 cut(s) | 16 |
| BccI | CCATC | 4 cut(s) | 106, 181, 216, 220 |
| BciVI | GTATCC | 1 cut(s) | 22 |
| BfuI | GTATCC | 1 cut(s) | 22 |
| BisI | GCNGC | 2 cut(s) | 5, 235 |
| BlsI | GCNGC | 2 cut(s) | 6, 236 |
| BmiI | GGNNCC | 1 cut(s) | 170 |
| BpiI | GAAGAC | 1 cut(s) | 105 |
| BpuEI | CTTGAG | 1 cut(s) | 213 |
| BsaAI | YACGTR | 1 cut(s) | 302 |
| BsaWI | WCCGGW | 1 cut(s) | 127 |
| BseAI | TCCGGA | 1 cut(s) | 127 |
| BseGI | GGATG | 1 cut(s) | 208 |
| BseXI | GCAGC | 1 cut(s) | 16 |
| BsiSI | CCGG | 1 cut(s) | 128 |
| BslFI | GGGAC | 1 cut(s) | 205 |
| BsmFI | GGGAC | 1 cut(s) | 205 |
| Bsp13I | TCCGGA | 1 cut(s) | 127 |
| BspACI | CCGC | 2 cut(s) | 7, 234 |
| BspEI | TCCGGA | 1 cut(s) | 127 |
| BspLI | GGNNCC | 1 cut(s) | 170 |
| Bst4CI | ACNGT | 1 cut(s) | 196 |
| BstBAI | YACGTR | 1 cut(s) | 302 |
| BstC8I | GCNNGC | 1 cut(s) | 44 |
| BstF5I | GGATG | 1 cut(s) | 208 |
| BstNSI | RCATGY | 1 cut(s) | 206 |
| BstSNI | TACGTA | 1 cut(s) | 302 |
| BstV1I | GCAGC | 1 cut(s) | 16 |
| BstV2I | GAAGAC | 1 cut(s) | 105 |
| BsuI | GTATCC | 1 cut(s) | 22 |
| BtsCI | GGATG | 1 cut(s) | 208 |
| Cac8I | GCNNGC | 1 cut(s) | 44 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 302 |
| CviAII | CATG | 1 cut(s) | 203 |
| CviJI | RGCY | 5 cut(s) | 35, 46, 90, 144, 265 |
| CviKI_1 | RGCY | 5 cut(s) | 35, 46, 90, 144, 265 |
| Eco105I | TACGTA | 1 cut(s) | 302 |
| FaeI | CATG | 1 cut(s) | 206 |
| FaiI | YATR | 6 cut(s) | 110, 135, 204, 239, 260, 317 |
| FaqI | GGGAC | 1 cut(s) | 205 |
| FatI | CATG | 1 cut(s) | 202 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 235 |
| FokI | GGATG | 1 cut(s) | 195 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 235 |
| GluI | GCNGC | 2 cut(s) | 5, 235 |
| HapII | CCGG | 1 cut(s) | 128 |
| Hin1II | CATG | 1 cut(s) | 206 |
| HpaII | CCGG | 1 cut(s) | 128 |
| HphI | GGTGA | 3 cut(s) | 10, 281, 287 |
| Hpy166II | GTNNAC | 1 cut(s) | 18 |
| Hpy188I | TCNGA | 3 cut(s) | 82, 94, 309 |
| Hpy188III | TCNNGA | 1 cut(s) | 128 |
| Hpy8I | GTNNAC | 1 cut(s) | 18 |
| HpyAV | CCTTC | 1 cut(s) | 302 |
| HpyCH4III | ACNGT | 1 cut(s) | 196 |
| HpyCH4IV | ACGT | 1 cut(s) | 301 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpySE526I | ACGT | 1 cut(s) | 301 |
| Hsp92II | CATG | 1 cut(s) | 206 |
| Kpn2I | TCCGGA | 1 cut(s) | 127 |
| LpnPI | CCDG | 4 cut(s) | 21, 28, 36, 141 |
| Lsp1109I | GCAGC | 1 cut(s) | 16 |
| MaeII | ACGT | 1 cut(s) | 301 |
| MboII | GAAGA | 1 cut(s) | 105 |
| MmeI | TCCRAC | 1 cut(s) | 223 |
| MnlI | CCTC | 1 cut(s) | 168 |
| MroI | TCCGGA | 1 cut(s) | 127 |
| MseI | TTAA | 2 cut(s) | 162, 267 |
| MslI | CAYNNNNRTG | 1 cut(s) | 23 |
| MspA1I | CMGCKG | 2 cut(s) | 7, 35 |
| MspI | CCGG | 1 cut(s) | 128 |
| NlaIII | CATG | 1 cut(s) | 206 |
| NlaIV | GGNNCC | 1 cut(s) | 170 |
| NspI | RCATGY | 1 cut(s) | 206 |
| OliI | CACNNNNGTG | 1 cut(s) | 23 |
| PkrI | GCNGC | 2 cut(s) | 6, 236 |
| Ppu21I | YACGTR | 1 cut(s) | 302 |
| PspN4I | GGNNCC | 1 cut(s) | 170 |
| PvuII | CAGCTG | 1 cut(s) | 35 |
| RseI | CAYNNNNRTG | 1 cut(s) | 23 |
| SaqAI | TTAA | 2 cut(s) | 162, 267 |
| SatI | GCNGC | 2 cut(s) | 5, 235 |
| SetI | ASST | 7 cut(s) | 37, 92, 170, 267, 294, 300, 304 |
| SgeI | CNNG | 8 cut(s) | 25, 35, 48, 55, 140, 201, 215, 242 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 23 |
| SmlI | CTYRAG | 1 cut(s) | 228 |
| SmoI | CTYRAG | 1 cut(s) | 228 |
| SnaBI | TACGTA | 1 cut(s) | 302 |
| SsiI | CCGC | 2 cut(s) | 7, 234 |
| TaaI | ACNGT | 1 cut(s) | 196 |
| TaiI | ACGT | 1 cut(s) | 304 |
| TauI | GCSGC | 1 cut(s) | 237 |
| Tru1I | TTAA | 2 cut(s) | 162, 267 |
| Tru9I | TTAA | 2 cut(s) | 162, 267 |
| TseI | GCWGC | 1 cut(s) | 4 |
| XceI | RCATGY | 1 cut(s) | 206 |