Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G18770 |
| fragaria_vesca | FvH4_1g23440 FvH4_1g23440 FvH4_1g23440 FvH4_1g23440 |
| malus_domestica | MD01G1001900.v1.1 |
| prunus_persica | Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 |
| pyrus_communis | pycom01g02590 |
| rosa_chinensis | RchiOBHm_Chr2g0118811 |
| rosa_laevigata | RLG00000018422 |
| rosa_multiflora | Rmu_co8044140.1_g000001 Rmu_sc0001814.1_g000017 Rmu_sc0003729.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00124700 Rroxscaffold_2G00125170 |
| rosa_rugosa | Rorug02G0218700 Rorug02G0218800 Rorug02G0218900 Rorug02G0219000 |
| rosa_samantha | Rh2AG276000 Rh2BG287700 Rh2DG282900 Rh2DG302000 |
| rosa_wichuraiana | Rw2G021960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2336 |
| AccB1I | GGYRCC | 1 cut(s) | 1427 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 769 |
| AciI | CCGC | 5 cut(s) | 1003, 1175, 1671, 2373, 3233 |
| AcsI | RAATTY | 4 cut(s) | 723, 818, 2650, 3394 |
| AcuI | CTGAAG | 1 cut(s) | 770 |
| AcyI | GRCGYC | 1 cut(s) | 442 |
| AfaI | GTAC | 9 cut(s) | 320, 1417, 1564, 1711, 1858, 2453, 3041, 3441, 3493 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 328, 634, 769, 1681, 2914 |
| AflII | CTTAAG | 1 cut(s) | 3652 |
| AjnI | CCWGG | 3 cut(s) | 141, 1023, 1048 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 452, 484 |
| Alw26I | GTCTC | 9 cut(s) | 618, 1254, 1577, 1871, 1992, 2018, 2726, 2983, 3663 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1560, 1854 |
| AoxI | GGCC | 7 cut(s) | 430, 771, 1575, 1722, 1869, 2016, 2370 |
| ApoI | RAATTY | 4 cut(s) | 723, 818, 2650, 3394 |
| AseI | ATTAAT | 2 cut(s) | 2010, 3147 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 423, 2256, 2424, 2523 |
| AspLEI | GCGC | 3 cut(s) | 214, 2984, 3358 |
| AspS9I | GGNCC | 5 cut(s) | 772, 1177, 1575, 1869, 3551 |
| AsuHPI | GGTGA | 5 cut(s) | 1047, 1258, 1778, 1925, 2072 |
| AsuNHI | GCTAGC | 1 cut(s) | 3124 |
| AvaII | GGWCC | 2 cut(s) | 1177, 3551 |
| BanI | GGYRCC | 1 cut(s) | 1427 |
| BbsI | GAAGAC | 3 cut(s) | 660, 2750, 3177 |
| BccI | CCATC | 8 cut(s) | 1459, 1528, 1675, 1969, 2116, 2648, 2744, 3520 |
| BceAI | ACGGC | 1 cut(s) | 771 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 386, 420 |
| BciT130I | CCWGG | 3 cut(s) | 143, 1025, 1050 |
| BclI | TGATCA | 1 cut(s) | 3370 |
| BcoDI | GTCTC | 9 cut(s) | 618, 1254, 1577, 1871, 1992, 2018, 2726, 2983, 3663 |
| BfmI | CTRYAG | 4 cut(s) | 888, 980, 3198, 3253 |
| BfrI | CTTAAG | 1 cut(s) | 3652 |
| BfuAI | ACCTGC | 1 cut(s) | 2336 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1730 |
| BglII | AGATCT | 3 cut(s) | 229, 1273, 3656 |
| BlpI | GCTNAGC | 1 cut(s) | 51 |
| Bme1390I | CCNGG | 3 cut(s) | 143, 1025, 1050 |
| Bme18I | GGWCC | 2 cut(s) | 1177, 3551 |
| BmgT120I | GGNCC | 5 cut(s) | 772, 1177, 1575, 1869, 3551 |
| BmiI | GGNNCC | 1 cut(s) | 1429 |
| BmrFI | CCNGG | 3 cut(s) | 143, 1025, 1050 |
| BmrI | ACTGGG | 1 cut(s) | 1236 |
| BmtI | GCTAGC | 1 cut(s) | 3128 |
| BmuI | ACTGGG | 1 cut(s) | 1236 |
| BpiI | GAAGAC | 3 cut(s) | 660, 2750, 3177 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1433, 1465 |
| BpmI | CTGGAG | 8 cut(s) | 1007, 1906, 2486, 2786, 2843, 2891, 3338, 3472 |
| Bpu10I | CCTNAGC | 2 cut(s) | 65, 1232 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 51 |
| BsaAI | YACGTR | 1 cut(s) | 2687 |
| BsaHI | GRCGYC | 1 cut(s) | 442 |
| BsaI | GGTCTC | 4 cut(s) | 618, 1254, 2726, 3663 |
| BsaJI | CCNNGG | 6 cut(s) | 768, 1049, 1284, 2895, 3078, 3547 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3074, 3104 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 328, 634, 769, 1681, 2914 |
| Bse1I | ACTGG | 8 cut(s) | 628, 879, 1164, 1231, 1889, 2826, 3321, 3489 |
| Bse3DI | GCAATG | 4 cut(s) | 671, 692, 1521, 2895 |
| BseBI | CCWGG | 3 cut(s) | 143, 1025, 1050 |
| BseDI | CCNNGG | 6 cut(s) | 768, 1049, 1284, 2895, 3078, 3547 |
| BseGI | GGATG | 8 cut(s) | 43, 394, 523, 865, 1011, 2474, 3153, 3250 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 328, 634, 769, 1681, 2914 |
| BseMI | GCAATG | 4 cut(s) | 671, 692, 1521, 2895 |
| BseNI | ACTGG | 8 cut(s) | 628, 879, 1164, 1231, 1889, 2826, 3321, 3489 |
| BseRI | GAGGAG | 4 cut(s) | 124, 554, 1010, 2189 |
| BsgI | GTGCAG | 4 cut(s) | 1029, 2174, 2856, 3168 |
| BshFI | GGCC | 7 cut(s) | 432, 773, 1577, 1724, 1871, 2018, 2372 |
| BshNI | GGYRCC | 1 cut(s) | 1427 |
| BslFI | GGGAC | 5 cut(s) | 911, 994, 1571, 1718, 1865 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 328, 634, 769, 1681, 2914 |
| BsmAI | GTCTC | 9 cut(s) | 618, 1254, 1577, 1871, 1992, 2018, 2726, 2983, 3663 |
| BsmFI | GGGAC | 5 cut(s) | 911, 994, 1571, 1718, 1865 |
| BsmI | GAATGC | 1 cut(s) | 2326 |
| BsnI | GGCC | 7 cut(s) | 432, 773, 1577, 1724, 1871, 2018, 2372 |
| Bso31I | GGTCTC | 4 cut(s) | 618, 1254, 2726, 3663 |
| Bsp1407I | TGTACA | 1 cut(s) | 1856 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 51 |
| BspACI | CCGC | 5 cut(s) | 1003, 1175, 1671, 2373, 3233 |
| BspANI | GGCC | 7 cut(s) | 432, 773, 1577, 1724, 1871, 2018, 2372 |
| BspLI | GGNNCC | 1 cut(s) | 1429 |
| BspMAI | CTGCAG | 2 cut(s) | 892, 3202 |
| BspMI | ACCTGC | 1 cut(s) | 2336 |
| BspOI | GCTAGC | 1 cut(s) | 3128 |
| BspQI | GCTCTTC | 1 cut(s) | 387 |
| BspT107I | GGYRCC | 1 cut(s) | 1427 |
| BspTI | CTTAAG | 1 cut(s) | 3652 |
| BspTNI | GGTCTC | 4 cut(s) | 618, 1254, 2726, 3663 |
| BsrDI | GCAATG | 4 cut(s) | 671, 692, 1521, 2895 |
| BsrGI | TGTACA | 1 cut(s) | 1856 |
| BsrI | ACTGG | 8 cut(s) | 628, 879, 1164, 1231, 1889, 2826, 3321, 3489 |
| BssECI | CCNNGG | 6 cut(s) | 768, 1049, 1284, 2895, 3078, 3547 |
| BssNI | GRCGYC | 1 cut(s) | 442 |
| BssT1I | CCWWGG | 5 cut(s) | 768, 1284, 2895, 3078, 3547 |
| Bst2UI | CCWGG | 3 cut(s) | 143, 1025, 1050 |
| Bst4CI | ACNGT | 6 cut(s) | 854, 1562, 1709, 1856, 2152, 2791 |
| Bst6I | CTCTTC | 8 cut(s) | 387, 414, 2274, 2712, 2769, 3027, 3121, 3516 |
| BstACI | GRCGYC | 1 cut(s) | 442 |
| BstAFI | CTTAAG | 1 cut(s) | 3652 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2509, 2861 |
| BstAUI | TGTACA | 1 cut(s) | 1856 |
| BstBAI | YACGTR | 1 cut(s) | 2687 |
| BstC8I | GCNNGC | 6 cut(s) | 171, 1082, 2924, 2970, 3126, 3312 |
| BstEII | GGTNACC | 1 cut(s) | 1053 |
| BstF5I | GGATG | 8 cut(s) | 43, 394, 523, 865, 1011, 2474, 3153, 3250 |
| BstHHI | GCGC | 3 cut(s) | 214, 2984, 3358 |
| BstMAI | GTCTC | 9 cut(s) | 618, 1254, 1577, 1871, 1992, 2018, 2726, 2983, 3663 |
| BstNI | CCWGG | 3 cut(s) | 143, 1025, 1050 |
| BstPI | GGTNACC | 1 cut(s) | 1053 |
| BstSCI | CCNGG | 3 cut(s) | 141, 1023, 1048 |
| BstSFI | CTRYAG | 4 cut(s) | 888, 980, 3198, 3253 |
| BstSNI | TACGTA | 1 cut(s) | 2687 |
| BstV2I | GAAGAC | 3 cut(s) | 660, 2750, 3177 |
| BstX2I | RGATCY | 3 cut(s) | 229, 1273, 3656 |
| BstYI | RGATCY | 3 cut(s) | 229, 1273, 3656 |
| BsuRI | GGCC | 7 cut(s) | 432, 773, 1577, 1724, 1871, 2018, 2372 |
| BtsCI | GGATG | 8 cut(s) | 43, 394, 523, 865, 1011, 2474, 3153, 3250 |
| BtsI | GCAGTG | 1 cut(s) | 3177 |
| BtsIMutI | CAGTG | 7 cut(s) | 859, 2602, 2643, 2939, 3177, 3231, 3314 |
| BveI | ACCTGC | 1 cut(s) | 2336 |
| Cac8I | GCNNGC | 6 cut(s) | 171, 1082, 2924, 2970, 3126, 3312 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1560, 1854 |
| CfoI | GCGC | 3 cut(s) | 214, 2984, 3358 |
| Cfr13I | GGNCC | 5 cut(s) | 772, 1177, 1575, 1869, 3551 |
| CseI | GACGC | 2 cut(s) | 431, 785 |
| Csp6I | GTAC | 9 cut(s) | 319, 1416, 1563, 1710, 1857, 2452, 3040, 3440, 3492 |
| CviQI | GTAC | 9 cut(s) | 319, 1416, 1563, 1710, 1857, 2452, 3040, 3440, 3492 |
| DraI | TTTAAA | 1 cut(s) | 156 |
| Eam1104I | CTCTTC | 8 cut(s) | 387, 414, 2274, 2712, 2769, 3027, 3121, 3516 |
| EarI | CTCTTC | 8 cut(s) | 387, 414, 2274, 2712, 2769, 3027, 3121, 3516 |
| Ecl136II | GAGCTC | 9 cut(s) | 1152, 1449, 1528, 1596, 1743, 1822, 1890, 1969, 2037 |
| Eco105I | TACGTA | 1 cut(s) | 2687 |
| Eco130I | CCWWGG | 5 cut(s) | 768, 1284, 2895, 3078, 3547 |
| Eco147I | AGGCCT | 1 cut(s) | 432 |
| Eco31I | GGTCTC | 4 cut(s) | 618, 1254, 2726, 3663 |
| Eco32I | GATATC | 1 cut(s) | 204 |
| Eco47I | GGWCC | 2 cut(s) | 1177, 3551 |
| Eco53kI | GAGCTC | 9 cut(s) | 1152, 1449, 1528, 1596, 1743, 1822, 1890, 1969, 2037 |
| Eco57I | CTGAAG | 1 cut(s) | 770 |
| Eco91I | GGTNACC | 1 cut(s) | 1053 |
| EcoICRI | GAGCTC | 9 cut(s) | 1152, 1449, 1528, 1596, 1743, 1822, 1890, 1969, 2037 |
| EcoO65I | GGTNACC | 1 cut(s) | 1053 |
| EcoRI | GAATTC | 1 cut(s) | 818 |
| EcoRII | CCWGG | 3 cut(s) | 141, 1023, 1048 |
| EcoRV | GATATC | 1 cut(s) | 204 |
| EcoT14I | CCWWGG | 5 cut(s) | 768, 1284, 2895, 3078, 3547 |
| EcoT22I | ATGCAT | 2 cut(s) | 496, 1407 |
| ErhI | CCWWGG | 5 cut(s) | 768, 1284, 2895, 3078, 3547 |
| FaqI | GGGAC | 5 cut(s) | 911, 994, 1571, 1718, 1865 |
| FbaI | TGATCA | 1 cut(s) | 3370 |
| FokI | GGATG | 8 cut(s) | 50, 401, 530, 872, 1018, 2461, 3140, 3257 |
| GlaI | GCGC | 3 cut(s) | 213, 2983, 3357 |
| GsuI | CTGGAG | 8 cut(s) | 1007, 1906, 2486, 2786, 2843, 2891, 3338, 3472 |
| HaeIII | GGCC | 7 cut(s) | 432, 773, 1577, 1724, 1871, 2018, 2372 |
| HgaI | GACGC | 2 cut(s) | 431, 785 |
| HhaI | GCGC | 3 cut(s) | 214, 2984, 3358 |
| Hin1I | GRCGYC | 1 cut(s) | 442 |
| Hin6I | GCGC | 3 cut(s) | 212, 2982, 3356 |
| HinP1I | GCGC | 3 cut(s) | 212, 2982, 3356 |
| HincII | GTYRAC | 1 cut(s) | 1908 |
| HindII | GTYRAC | 1 cut(s) | 1908 |
| HindIII | AAGCTT | 4 cut(s) | 2133, 2204, 2397, 2700 |
| HphI | GGTGA | 5 cut(s) | 1047, 1258, 1778, 1925, 2072 |
| Hpy166II | GTNNAC | 3 cut(s) | 1908, 2955, 3260 |
| Hpy8I | GTNNAC | 3 cut(s) | 1908, 2955, 3260 |
| HpyAV | CCTTC | 5 cut(s) | 574, 1068, 2362, 2594, 3001 |
| HpyCH4III | ACNGT | 6 cut(s) | 854, 1562, 1709, 1856, 2152, 2791 |
| HpyCH4IV | ACGT | 3 cut(s) | 2362, 2539, 2686 |
| HpySE526I | ACGT | 3 cut(s) | 2362, 2539, 2686 |
| Hsp92I | GRCGYC | 1 cut(s) | 442 |
| HspAI | GCGC | 3 cut(s) | 212, 2982, 3356 |
| Ksp22I | TGATCA | 1 cut(s) | 3370 |
| LguI | GCTCTTC | 1 cut(s) | 387 |
| MaeII | ACGT | 3 cut(s) | 2362, 2539, 2686 |
| MaeIII | GTNAC | 4 cut(s) | 839, 1053, 2138, 2817 |
| MflI | RGATCY | 3 cut(s) | 229, 1273, 3656 |
| MlyI | GAGTC | 4 cut(s) | 266, 836, 2465, 3083 |
| MmeI | TCCRAC | 3 cut(s) | 2109, 3046, 3498 |
| Mph1103I | ATGCAT | 2 cut(s) | 496, 1407 |
| MroXI | GAANNNNTTC | 4 cut(s) | 423, 2256, 2424, 2523 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1391 |
| MspA1I | CMGCKG | 3 cut(s) | 748, 1175, 1619 |
| MspCI | CTTAAG | 1 cut(s) | 3652 |
| MspR9I | CCNGG | 3 cut(s) | 143, 1025, 1050 |
| Mva1269I | GAATGC | 1 cut(s) | 2326 |
| MvaI | CCWGG | 3 cut(s) | 143, 1025, 1050 |
| NheI | GCTAGC | 1 cut(s) | 3124 |
| NlaIV | GGNNCC | 1 cut(s) | 1429 |
| NmuCI | GTSAC | 3 cut(s) | 839, 1053, 2138 |
| NsiI | ATGCAT | 2 cut(s) | 496, 1407 |
| PceI | AGGCCT | 1 cut(s) | 432 |
| PciSI | GCTCTTC | 1 cut(s) | 387 |
| PctI | GAATGC | 1 cut(s) | 2326 |
| PdmI | GAANNNNTTC | 4 cut(s) | 423, 2256, 2424, 2523 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 769 |
| PfoI | TCCNGGA | 2 cut(s) | 141, 1023 |
| PleI | GAGTC | 4 cut(s) | 265, 836, 2465, 3082 |
| PpsI | GAGTC | 4 cut(s) | 265, 836, 2465, 3082 |
| Ppu21I | YACGTR | 1 cut(s) | 2687 |
| PshBI | ATTAAT | 2 cut(s) | 2010, 3147 |
| Psp124BI | GAGCTC | 9 cut(s) | 1154, 1451, 1530, 1598, 1745, 1824, 1892, 1971, 2039 |
| Psp6I | CCWGG | 3 cut(s) | 141, 1023, 1048 |
| PspEI | GGTNACC | 1 cut(s) | 1053 |
| PspGI | CCWGG | 3 cut(s) | 141, 1023, 1048 |
| PspN4I | GGNNCC | 1 cut(s) | 1429 |
| PspPI | GGNCC | 5 cut(s) | 772, 1177, 1575, 1869, 3551 |
| PstI | CTGCAG | 2 cut(s) | 892, 3202 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1560, 1854 |
| PsuI | RGATCY | 3 cut(s) | 229, 1273, 3656 |
| PvuII | CAGCTG | 2 cut(s) | 748, 1619 |
| RsaI | GTAC | 9 cut(s) | 320, 1417, 1564, 1711, 1858, 2453, 3041, 3441, 3493 |
| RsaNI | GTAC | 9 cut(s) | 319, 1416, 1563, 1710, 1857, 2452, 3040, 3440, 3492 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1391 |
| SacI | GAGCTC | 9 cut(s) | 1154, 1451, 1530, 1598, 1745, 1824, 1892, 1971, 2039 |
| SapI | GCTCTTC | 1 cut(s) | 387 |
| Sau96I | GGNCC | 5 cut(s) | 772, 1177, 1575, 1869, 3551 |
| SchI | GAGTC | 4 cut(s) | 266, 836, 2465, 3083 |
| ScrFI | CCNGG | 3 cut(s) | 143, 1025, 1050 |
| SfcI | CTRYAG | 4 cut(s) | 888, 980, 3198, 3253 |
| SinI | GGWCC | 2 cut(s) | 1177, 3551 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1391 |
| SnaBI | TACGTA | 1 cut(s) | 2687 |
| SseBI | AGGCCT | 1 cut(s) | 432 |
| SsiI | CCGC | 5 cut(s) | 1003, 1175, 1671, 2373, 3233 |
| SstI | GAGCTC | 9 cut(s) | 1154, 1451, 1530, 1598, 1745, 1824, 1892, 1971, 2039 |
| StuI | AGGCCT | 1 cut(s) | 432 |
| StyD4I | CCNGG | 3 cut(s) | 141, 1023, 1048 |
| StyI | CCWWGG | 5 cut(s) | 768, 1284, 2895, 3078, 3547 |
| TaaI | ACNGT | 6 cut(s) | 854, 1562, 1709, 1856, 2152, 2791 |
| TaiI | ACGT | 3 cut(s) | 2365, 2542, 2689 |
| TaqI | TCGA | 2 cut(s) | 162, 2352 |
| TatI | WGTACW | 6 cut(s) | 1415, 1562, 1709, 1856, 3439, 3491 |
| TauI | GCSGC | 1 cut(s) | 2375 |
| TscAI | CASTG | 7 cut(s) | 859, 2602, 2650, 2946, 3184, 3231, 3321 |
| TseFI | GTSAC | 3 cut(s) | 839, 1053, 2138 |
| Tsp45I | GTSAC | 3 cut(s) | 839, 1053, 2138 |
| TspGWI | ACGGA | 2 cut(s) | 1844, 3379 |
| TspRI | CASTG | 7 cut(s) | 859, 2602, 2650, 2946, 3184, 3231, 3321 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 769 |
| Vha464I | CTTAAG | 1 cut(s) | 3652 |
| VpaK11BI | GGWCC | 2 cut(s) | 1177, 3551 |
| VspI | ATTAAT | 2 cut(s) | 2010, 3147 |
| XapI | RAATTY | 4 cut(s) | 723, 818, 2650, 3394 |
| XbaI | TCTAGA | 3 cut(s) | 598, 2527, 2770 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 346 |
| XmnI | GAANNNNTTC | 4 cut(s) | 423, 2256, 2424, 2523 |
| Zsp2I | ATGCAT | 2 cut(s) | 496, 1407 |