Rroxscaffold_2G00124700

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0005035
Physical Location & Seq
Forward (+)
59133895 .. 59137517
3623 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00124700.1

Sequence Viewer

Length: 1764 bp
ATGTCCTCGAGAAATTATAGTGGCGAACAAGCCTTGTCGTCGCCATCATCTTCCTCTTCGTCCTCCTCGAGTGTGAGGCCGAGGGATAAGTGGTTTAATTTAGCTCTAAGAGAATGCCCTGCTGCGCTGGAGAATCTTGATCTCTGGCGCCAGAGCAATTTTGAACCTATGGTGGTTGATGTGGTTTTGGTCCAGAGACCACTTGTTAGTGACCCGGTGGAATGTTCACCGAAAAGGGATCTTGCTAGGAACTTGTCATTGAAAGAGCGGTATCCATACTGTTGGAATTATGAGCAGGAAGATTTTTGGTGTGAGGCAAAGAGTGAAAAGATTATAGAGAGATGGGTACTGCAGTACGATACTCGCAAGACTAGAGATACAAAATCAGGGAGCAGGAGGTCGAGCAATAATCCTTTACCGATGTTGTATAAGAAATCAATATTACTGTTGAGGTCTTTGTATGTTACTGTTAGGCTTTTACCTGCTTATAAAATTTATCGTGACCTCAATTCATCTGGCCAAATTCTTCCATTTACTCTTGCTCACCGGGTGGCCTCTTTTGCTGAGCCCTTCACATGTAGAGAAGATGCAGAAATGCAGCGGTTTGAGTTTACCCCTGTGGATACGACTTGTGGTAGGCTTTGCCTTTCAGTGTTGTATTGTTCATCACTTTCAGATGTAAGCTCTGAACCGTCGACTCCTATGTCTCCACAAGTTATACCAGACTATGTTGGGAGCCCATTGGCAGACCCGCTTAAAAGGTTCCCATCCCTTCCTGTGACAGGATCATTATCACGTGCCACTCCATTATCGTCTTCATTCTCGAGGCGTCATAGTTGGAGTTATGACCATGGTATAGATTCACCACCTTCAGTTTCTTTCTCACCTTCGCCTACTCGTTCAGAGCCTCATGCTTCAATTTCTAACCCAAGATCTCGCCATTTCCCACCCACAAGCTTACCACGTTATCCGCCTGAAACATCTCTTGATTATAAGAAGGATATAGGTTTTTATGAGTATTGTCCGTCACCTGGCTTTTCTCCTGCACTGTCCCCATCAGCCTCTCCATCATTGCCAATCTCTATTCCTGGCAATCATGTTTCAAAGAATCTGTTACGATCTGAGAGTGCACCATTCAGTGCCCCAGTGGCCAAACGTGCTAATTCCCCTGCATCATCCCAGAAGCTAAATTTTCCTCCATCTCCCCCCTTACAAGTACAAGTTCTGTTATTCTCTTTTGGGAAAGGGGAGTCTAGACAATGTTCTGGGCTTAAGATAGCATCAGGCGGCTCACCGCAGATATCCTTTTCCAGAAGCTCCACTAGGTCTTTTCCTGATGATTTTGATGATTCGGAGTATCCTTGCCCATTTGATTATGATGATGATGTGACAGACCCCGGTAGCAGACCTGAATCCTTTGACCAAAGGCATGAGCCTGGAGGATTATTTCCAATTAAAAAATCCCAAGACGCTGCTGTTGGCGCGCTTGTAAGAATGCTAAAGAAAGCCCCACCTCTTCGGCAAGAGGTCTCAGATTCAGTAAGTTTGTCACAAGGCTGCAGGCCTGAAATGTGGAGTGATGGTAAACAAGAGGTCAATCTTTCTTCTGAGAGTCAGGCACCAGTTCAGCCTGCTGATTCCTCAAGTGTTATATCATCAGGGCTCATAACATCAAAAACGACAGCTGATGCCTTAGAAGAGCTCCAAAGTTACAGGGATATAAAAAACTCGTTACTGGCGCAAAGTAGTAAGTCTCACATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04140 ko04211 map04136 map04138 map04140 map04211
Pfam Domains
Protein Families
ATG13

Protein Analysis

587

Amino Acids

65.0

Weight (kDa)

7.89

Isoelectric Point (pI)

77.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATG13 PF10033 19 - 221 4e-36 Autophagy-related protein 13
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 489, 993
AasI GACNNNNNNGTC 1 cut(s) 703
Acc36I ACCTGC 1 cut(s) 490
AccB1I GGYRCC 2 cut(s) 147, 1618
AccBSI CCGCTC 1 cut(s) 268
AccI GTMKAC 1 cut(s) 695
AccII CGCG 1 cut(s) 1484
AciI CCGC 6 cut(s) 268, 601, 752, 971, 1287, 1295
AclWI GGATC 2 cut(s) 246, 793
AcoI YGGCCR 2 cut(s) 517, 1149
AcsI RAATTY 3 cut(s) 492, 522, 1189
AcuI CTGAAG 1 cut(s) 855
AcvI CACGTG 1 cut(s) 797
AcyI GRCGYC 2 cut(s) 148, 829
AdeI CACNNNGTG 1 cut(s) 550
AfaI GTAC 3 cut(s) 348, 356, 1218
AfiI CCNNNNNNNGG 2 cut(s) 782, 1031
AflII CTTAAG 1 cut(s) 1271
AflIII ACRYGT 2 cut(s) 575, 1758
AgsI TTSAA 4 cut(s) 164, 262, 918, 1104
AjnI CCWGG 3 cut(s) 1030, 1087, 1435
AluBI AGCT 7 cut(s) 104, 684, 957, 1186, 1317, 1685, 1702
AluI AGCT 7 cut(s) 104, 684, 957, 1186, 1317, 1685, 1702
Alw21I GWGCWC 2 cut(s) 1132, 1704
Alw26I GTCTC 4 cut(s) 190, 711, 1534, 1758
Alw44I GTGCAC 1 cut(s) 1128
AlwI GGATC 2 cut(s) 246, 793
Ama87I CYCGRG 3 cut(s) 7, 67, 823
AoxI GGCC 5 cut(s) 77, 517, 552, 1149, 1562
ApaLI GTGCAC 1 cut(s) 1128
ApeKI GCWGC 4 cut(s) 122, 598, 1472, 1557
ApoI RAATTY 3 cut(s) 492, 522, 1189
AspLEI GCGC 5 cut(s) 127, 150, 1484, 1486, 1741
AspS9I GGNCC 1 cut(s) 190
AsuC2I CCSGG 3 cut(s) 215, 548, 1398
AsuHPI GGTGA 6 cut(s) 219, 536, 855, 876, 1020, 1284
AvaI CYCGRG 3 cut(s) 7, 67, 823
AvaII GGWCC 1 cut(s) 190
BaeGI GKGCMC 2 cut(s) 1132, 1144
BaeI ACNNNNGTAYC 2 cut(s) 338, 371
BalI TGGCCA 2 cut(s) 519, 1151
BanI GGYRCC 2 cut(s) 147, 1618
BanII GRGCYC 4 cut(s) 570, 740, 1665, 1704
BbrPI CACGTG 1 cut(s) 797
BbsI GAAGAC 1 cut(s) 807
Bbv12I GWGCWC 2 cut(s) 1132, 1704
BbvI GCAGC 4 cut(s) 109, 610, 1459, 1544
BccI CCATC 7 cut(s) 52, 336, 775, 1063, 1075, 1207, 1574
BciT130I CCWGG 3 cut(s) 1032, 1089, 1437
BciVI GTATCC 3 cut(s) 282, 616, 1368
BcnI CCSGG 3 cut(s) 215, 548, 1398
BcoDI GTCTC 4 cut(s) 190, 711, 1534, 1758
BfaI CTAG 4 cut(s) 246, 372, 1254, 1323
BfmI CTRYAG 2 cut(s) 350, 1558
BfoI RGCGCY 1 cut(s) 151
BfrI CTTAAG 1 cut(s) 1271
BfuAI ACCTGC 1 cut(s) 490
BfuI GTATCC 3 cut(s) 282, 616, 1368
BglI GCCNNNNNGGC 1 cut(s) 1148
BglII AGATCT 1 cut(s) 932
BisI GCNGC 5 cut(s) 123, 599, 1288, 1473, 1558
BlpI GCTNAGC 1 cut(s) 564
BlsI GCNGC 5 cut(s) 124, 600, 1289, 1474, 1559
Bme1390I CCNGG 6 cut(s) 215, 548, 1032, 1089, 1398, 1437
Bme18I GGWCC 1 cut(s) 190
BmeT110I CYCGRG 3 cut(s) 7, 67, 823
BmgT120I GGNCC 1 cut(s) 190
BmiI GGNNCC 4 cut(s) 149, 737, 764, 1620
BmrFI CCNGG 6 cut(s) 215, 548, 1032, 1089, 1398, 1437
BmrI ACTGGG 1 cut(s) 1139
BmsI GCATC 4 cut(s) 577, 1181, 1289, 1678
BmuI ACTGGG 1 cut(s) 1139
BpiI GAAGAC 1 cut(s) 807
BpmI CTGGAG 2 cut(s) 149, 1458
Bpu1102I GCTNAGC 1 cut(s) 564
BpuEI CTTGAG 1 cut(s) 1627
BpuMI CCSGG 3 cut(s) 215, 548, 1398
BsaAI YACGTR 1 cut(s) 797
BsaBI GATNNNNATC 1 cut(s) 790
BsaHI GRCGYC 2 cut(s) 148, 829
BsaI GGTCTC 2 cut(s) 190, 1534
BsaJI CCNNGG 3 cut(s) 80, 850, 1396
BsaXI ACNNNNNCTCC 2 cut(s) 1567, 1597
Bsc4I CCNNNNNNNGG 2 cut(s) 782, 1031
Bse1I ACTGG 3 cut(s) 1145, 1622, 1740
Bse3DI GCAATG 1 cut(s) 1070
Bse8I GATNNNNATC 1 cut(s) 790
BseBI CCWGG 3 cut(s) 1032, 1089, 1437
BseDI CCNNGG 3 cut(s) 80, 850, 1396
BseGI GGATG 2 cut(s) 767, 1175
BseJI GATNNNNATC 1 cut(s) 790
BseLI CCNNNNNNNGG 2 cut(s) 782, 1031
BseMI GCAATG 1 cut(s) 1070
BseMII CTCAG 4 cut(s) 555, 1113, 1545, 1599
BseNI ACTGG 3 cut(s) 1145, 1622, 1740
BsePI GCGCGC 1 cut(s) 1482
BseRI GAGGAG 1 cut(s) 55
BseSI GKGCMC 2 cut(s) 1132, 1144
BseXI GCAGC 4 cut(s) 109, 610, 1459, 1544
BsgI GTGCAG 1 cut(s) 1029
Bsh1236I CGCG 1 cut(s) 1484
BshFI GGCC 5 cut(s) 79, 519, 554, 1151, 1564
BshNI GGYRCC 2 cut(s) 147, 1618
BsiHKAI GWGCWC 2 cut(s) 1132, 1704
BsiHKCI CYCGRG 3 cut(s) 7, 67, 823
BsiSI CCGG 3 cut(s) 215, 547, 1398
BslFI GGGAC 1 cut(s) 1036
BslI CCNNNNNNNGG 2 cut(s) 782, 1031
BsmAI GTCTC 4 cut(s) 190, 711, 1534, 1758
BsmFI GGGAC 1 cut(s) 1036
BsmI GAATGC 2 cut(s) 119, 1500
BsnI GGCC 5 cut(s) 79, 519, 554, 1151, 1564
Bso31I GGTCTC 2 cut(s) 190, 1534
BsoBI CYCGRG 3 cut(s) 7, 67, 823
Bsp1286I GDGCHC 6 cut(s) 570, 740, 1132, 1144, 1665, 1704
Bsp143I GATC 5 cut(s) 139, 238, 785, 932, 1118
Bsp1720I GCTNAGC 1 cut(s) 564
Bsp19I CCATGG 1 cut(s) 850
BspACI CCGC 6 cut(s) 268, 601, 752, 971, 1287, 1295
BspANI GGCC 5 cut(s) 79, 519, 554, 1151, 1564
BspCNI CTCAG 4 cut(s) 556, 1114, 1544, 1600
BspFNI CGCG 1 cut(s) 1484
BspLI GGNNCC 4 cut(s) 149, 737, 764, 1620
BspMAI CTGCAG 2 cut(s) 354, 1562
BspMI ACCTGC 1 cut(s) 490
BspPI GGATC 2 cut(s) 246, 793
BspQI GCTCTTC 1 cut(s) 1692
BspT107I GGYRCC 2 cut(s) 147, 1618
BspTI CTTAAG 1 cut(s) 1271
BspTNI GGTCTC 2 cut(s) 190, 1534
BsrBI CCGCTC 1 cut(s) 268
BsrDI GCAATG 1 cut(s) 1070
BsrI ACTGG 3 cut(s) 1145, 1622, 1740
BssECI CCNNGG 3 cut(s) 80, 850, 1396
BssHII GCGCGC 1 cut(s) 1482
BssMI GATC 5 cut(s) 139, 238, 785, 932, 1118
BssNI GRCGYC 2 cut(s) 148, 829
BssT1I CCWWGG 1 cut(s) 850
Bst2UI CCWGG 3 cut(s) 1032, 1089, 1437
Bst4CI ACNGT 5 cut(s) 281, 447, 469, 693, 1050
Bst6I CTCTTC 3 cut(s) 61, 1521, 1692
BstACI GRCGYC 2 cut(s) 148, 829
BstAFI CTTAAG 1 cut(s) 1271
BstBAI YACGTR 1 cut(s) 797
BstC8I GCNNGC 3 cut(s) 1484, 1562, 1632
BstDEI CTNAG 6 cut(s) 107, 564, 1122, 1531, 1608, 1693
BstDSI CCRYGG 1 cut(s) 850
BstENI CCTNNNNNAGG 1 cut(s) 780
BstF5I GGATG 2 cut(s) 767, 1175
BstFNI CGCG 1 cut(s) 1484
BstH2I RGCGCY 1 cut(s) 151
BstHHI GCGC 5 cut(s) 127, 150, 1484, 1486, 1741
BstKTI GATC 5 cut(s) 142, 241, 788, 935, 1121
BstMAI GTCTC 4 cut(s) 190, 711, 1534, 1758
BstMBI GATC 5 cut(s) 139, 238, 785, 932, 1118
BstMWI GCNNNNNNNGC 4 cut(s) 560, 1148, 1157, 1481
BstNI CCWGG 3 cut(s) 1032, 1089, 1437
BstNSI RCATGY 2 cut(s) 579, 1762
BstSCI CCNGG 6 cut(s) 213, 546, 1030, 1087, 1396, 1435
BstSFI CTRYAG 2 cut(s) 350, 1558
BstSLI GKGCMC 2 cut(s) 1132, 1144
BstUI CGCG 1 cut(s) 1484
BstV1I GCAGC 4 cut(s) 109, 610, 1459, 1544
BstV2I GAAGAC 1 cut(s) 807
BstX2I RGATCY 2 cut(s) 238, 932
BstXI CCANNNNNNTGG 1 cut(s) 282
BstYI RGATCY 2 cut(s) 238, 932
BsuI GTATCC 3 cut(s) 282, 616, 1368
BsuRI GGCC 5 cut(s) 79, 519, 554, 1151, 1564
BtgI CCRYGG 1 cut(s) 850
BtsCI GGATG 2 cut(s) 767, 1175
BtsIMutI CAGTG 4 cut(s) 657, 1046, 1144, 1152
BveI ACCTGC 1 cut(s) 490
Cac8I GCNNGC 3 cut(s) 1484, 1562, 1632
CfoI GCGC 5 cut(s) 127, 150, 1484, 1486, 1741
Cfr13I GGNCC 1 cut(s) 190
CseI GACGC 2 cut(s) 818, 1478
Csp6I GTAC 3 cut(s) 347, 355, 1217
CviAII CATG 6 cut(s) 576, 851, 911, 1097, 1430, 1759
CviQI GTAC 3 cut(s) 347, 355, 1217
DdeI CTNAG 6 cut(s) 107, 564, 1122, 1531, 1608, 1693
DinI GGCGCC 1 cut(s) 149
DpnI GATC 5 cut(s) 141, 240, 787, 934, 1120
DpnII GATC 5 cut(s) 139, 238, 785, 932, 1118
DraIII CACNNNGTG 1 cut(s) 550
DrdI GACNNNNNNGTC 1 cut(s) 703
DseDI GACNNNNNNGTC 1 cut(s) 703
EaeI YGGCCR 2 cut(s) 517, 1149
Eam1104I CTCTTC 3 cut(s) 61, 1521, 1692
EarI CTCTTC 3 cut(s) 61, 1521, 1692
EciI GGCGGA 1 cut(s) 960
Ecl136II GAGCTC 1 cut(s) 1702
Eco130I CCWWGG 1 cut(s) 850
Eco147I AGGCCT 1 cut(s) 1564
Eco24I GRGCYC 4 cut(s) 570, 740, 1665, 1704
Eco31I GGTCTC 2 cut(s) 190, 1534
Eco32I GATATC 1 cut(s) 1302
Eco47I GGWCC 1 cut(s) 190
Eco53kI GAGCTC 1 cut(s) 1702
Eco57I CTGAAG 1 cut(s) 855
Eco72I CACGTG 1 cut(s) 797
Eco88I CYCGRG 3 cut(s) 7, 67, 823
EcoICRI GAGCTC 1 cut(s) 1702
EcoNI CCTNNNNNAGG 1 cut(s) 780
EcoRII CCWGG 3 cut(s) 1030, 1087, 1435
EcoRV GATATC 1 cut(s) 1302
EcoT14I CCWWGG 1 cut(s) 850
EcoT38I GRGCYC 4 cut(s) 570, 740, 1665, 1704
EgeI GGCGCC 1 cut(s) 149
EheI GGCGCC 1 cut(s) 149
ErhI CCWWGG 1 cut(s) 850
FaeI CATG 6 cut(s) 579, 854, 914, 1100, 1433, 1762
FaqI GGGAC 1 cut(s) 1036
FatI CATG 6 cut(s) 575, 850, 910, 1096, 1429, 1758
FauI CCCGC 1 cut(s) 759
FblI GTMKAC 1 cut(s) 695
Fnu4HI GCNGC 5 cut(s) 123, 599, 1288, 1473, 1558
FokI GGATG 2 cut(s) 754, 1162
FriOI GRGCYC 4 cut(s) 570, 740, 1665, 1704
Fsp4HI GCNGC 5 cut(s) 123, 599, 1288, 1473, 1558
FspBI CTAG 4 cut(s) 246, 372, 1254, 1323
GlaI GCGC 5 cut(s) 126, 149, 1483, 1485, 1740
GluI GCNGC 5 cut(s) 123, 599, 1288, 1473, 1558
GsuI CTGGAG 2 cut(s) 149, 1458
HaeII RGCGCY 1 cut(s) 151
HaeIII GGCC 5 cut(s) 79, 519, 554, 1151, 1564
HapII CCGG 3 cut(s) 215, 547, 1398
HgaI GACGC 2 cut(s) 818, 1478
HhaI GCGC 5 cut(s) 127, 150, 1484, 1486, 1741
Hin1I GRCGYC 2 cut(s) 148, 829
Hin1II CATG 6 cut(s) 579, 854, 914, 1100, 1433, 1762
Hin6I GCGC 5 cut(s) 125, 148, 1482, 1484, 1739
HinP1I GCGC 5 cut(s) 125, 148, 1482, 1484, 1739
HincII GTYRAC 1 cut(s) 696
HindII GTYRAC 1 cut(s) 696
HindIII AAGCTT 1 cut(s) 955
HpaII CCGG 3 cut(s) 215, 547, 1398
HphI GGTGA 6 cut(s) 219, 536, 855, 876, 1020, 1284
Hpy166II GTNNAC 5 cut(s) 227, 612, 696, 1130, 1586
Hpy188I TCNGA 7 cut(s) 676, 688, 904, 1123, 1354, 1534, 1609
Hpy188III TCNNGA 9 cut(s) 9, 137, 193, 500, 823, 986, 1254, 1311, 1334
Hpy8I GTNNAC 5 cut(s) 227, 612, 696, 1130, 1586
Hpy99I CGWCG 2 cut(s) 43, 697
HpyAV CCTTC 5 cut(s) 580, 782, 879, 897, 991
HpyCH4III ACNGT 5 cut(s) 281, 447, 469, 693, 1050
HpyCH4IV ACGT 3 cut(s) 796, 964, 1156
HpyCH4V TGCA 7 cut(s) 352, 590, 598, 1046, 1130, 1172, 1560
HpyF10VI GCNNNNNNNGC 4 cut(s) 560, 1148, 1157, 1481
HpyF3I CTNAG 6 cut(s) 107, 564, 1122, 1531, 1608, 1693
HpySE526I ACGT 3 cut(s) 796, 964, 1156
Hsp92I GRCGYC 2 cut(s) 148, 829
Hsp92II CATG 6 cut(s) 579, 854, 914, 1100, 1433, 1762
HspAI GCGC 5 cut(s) 125, 148, 1482, 1484, 1739
KasI GGCGCC 1 cut(s) 147
Kzo9I GATC 5 cut(s) 139, 238, 785, 932, 1118
LguI GCTCTTC 1 cut(s) 1692
LmnI GCTCC 4 cut(s) 390, 735, 1322, 1707
Lsp1109I GCAGC 4 cut(s) 109, 610, 1459, 1544
LweI GCATC 4 cut(s) 577, 1181, 1289, 1678
MaeI CTAG 4 cut(s) 246, 372, 1254, 1323
MaeII ACGT 3 cut(s) 796, 964, 1156
MalI GATC 5 cut(s) 141, 240, 787, 934, 1120
MbiI CCGCTC 1 cut(s) 268
MboI GATC 5 cut(s) 139, 238, 785, 932, 1118
MboII GAAGA 9 cut(s) 42, 48, 311, 518, 596, 807, 1508, 1596, 1709
MflI RGATCY 2 cut(s) 238, 932
MhlI GDGCHC 6 cut(s) 570, 740, 1132, 1144, 1665, 1704
MlsI TGGCCA 2 cut(s) 519, 1151
MluNI TGGCCA 2 cut(s) 519, 1151
Mly113I GGCGCC 1 cut(s) 148
MlyI GAGTC 3 cut(s) 691, 1259, 1621
MmeI TCCRAC 2 cut(s) 263, 818
Mox20I TGGCCA 2 cut(s) 519, 1151
MscI TGGCCA 2 cut(s) 519, 1151
MseI TTAA 4 cut(s) 96, 756, 1272, 1455
Msp20I TGGCCA 2 cut(s) 519, 1151
MspA1I CMGCKG 2 cut(s) 601, 1685
MspCI CTTAAG 1 cut(s) 1271
MspI CCGG 3 cut(s) 215, 547, 1398
MspR9I CCNGG 6 cut(s) 215, 548, 1032, 1089, 1398, 1437
Mva1269I GAATGC 2 cut(s) 119, 1500
MvaI CCWGG 3 cut(s) 1032, 1089, 1437
MvnI CGCG 1 cut(s) 1484
MwoI GCNNNNNNNGC 4 cut(s) 560, 1148, 1157, 1481
NarI GGCGCC 1 cut(s) 148
NciI CCSGG 3 cut(s) 215, 548, 1398
NcoI CCATGG 1 cut(s) 850
NdeII GATC 5 cut(s) 139, 238, 785, 932, 1118
NlaIII CATG 6 cut(s) 579, 854, 914, 1100, 1433, 1762
NlaIV GGNNCC 4 cut(s) 149, 737, 764, 1620
NmeAIII GCCGAG 1 cut(s) 105
NmuCI GTSAC 6 cut(s) 209, 500, 778, 1026, 1387, 1548
NspI RCATGY 2 cut(s) 579, 1762
PaeR7I CTCGAG 3 cut(s) 7, 67, 823
PauI GCGCGC 1 cut(s) 1482
PceI AGGCCT 1 cut(s) 1564
PciI ACATGT 2 cut(s) 575, 1758
PciSI GCTCTTC 1 cut(s) 1692
PcsI WCGNNNNNNNCGW 1 cut(s) 65
PctI GAATGC 2 cut(s) 119, 1500
PfeI GAWTC 7 cut(s) 133, 860, 1108, 1349, 1412, 1535, 1637
PkrI GCNGC 5 cut(s) 124, 600, 1289, 1474, 1559
PleI GAGTC 3 cut(s) 691, 1258, 1620
PluTI GGCGCC 1 cut(s) 151
PmaCI CACGTG 1 cut(s) 797
PmlI CACGTG 1 cut(s) 797
PpsI GAGTC 3 cut(s) 691, 1258, 1620
Ppu21I YACGTR 1 cut(s) 797
PscI ACATGT 2 cut(s) 575, 1758
PsiI TTATAA 2 cut(s) 489, 993
Psp124BI GAGCTC 1 cut(s) 1704
Psp6I CCWGG 3 cut(s) 1030, 1087, 1435
PspCI CACGTG 1 cut(s) 797
PspGI CCWGG 3 cut(s) 1030, 1087, 1435
PspN4I GGNNCC 4 cut(s) 149, 737, 764, 1620
PspPI GGNCC 1 cut(s) 190
PspXI VCTCGAGB 1 cut(s) 67
PstI CTGCAG 2 cut(s) 354, 1562
PsuI RGATCY 2 cut(s) 238, 932
PteI GCGCGC 1 cut(s) 1482
PvuII CAGCTG 1 cut(s) 1685
RsaI GTAC 3 cut(s) 348, 356, 1218
RsaNI GTAC 3 cut(s) 347, 355, 1217
SacI GAGCTC 1 cut(s) 1704
SalI GTCGAC 1 cut(s) 694
SapI GCTCTTC 1 cut(s) 1692
SaqAI TTAA 4 cut(s) 96, 756, 1272, 1455
SatI GCNGC 5 cut(s) 123, 599, 1288, 1473, 1558
Sau3AI GATC 5 cut(s) 139, 238, 785, 932, 1118
Sau96I GGNCC 1 cut(s) 190
SchI GAGTC 3 cut(s) 691, 1259, 1621
ScrFI CCNGG 6 cut(s) 215, 548, 1032, 1089, 1398, 1437
SduI GDGCHC 6 cut(s) 570, 740, 1132, 1144, 1665, 1704
SfaNI GCATC 4 cut(s) 577, 1181, 1289, 1678
SfcI CTRYAG 2 cut(s) 350, 1558
SfoI GGCGCC 1 cut(s) 149
Sfr274I CTCGAG 3 cut(s) 7, 67, 823
SinI GGWCC 1 cut(s) 190
SlaI CTCGAG 3 cut(s) 7, 67, 823
SmlI CTYRAG 5 cut(s) 7, 67, 823, 1271, 1642
SmoI CTYRAG 5 cut(s) 7, 67, 823, 1271, 1642
SseBI AGGCCT 1 cut(s) 1564
SsiI CCGC 6 cut(s) 268, 601, 752, 971, 1287, 1295
SspDI GGCGCC 1 cut(s) 147
SspI AATATT 1 cut(s) 441
SspMI CTAG 4 cut(s) 246, 372, 1254, 1323
SstI GAGCTC 1 cut(s) 1704
StuI AGGCCT 1 cut(s) 1564
StyD4I CCNGG 6 cut(s) 213, 546, 1030, 1087, 1396, 1435
StyI CCWWGG 1 cut(s) 850
TaaI ACNGT 5 cut(s) 281, 447, 469, 693, 1050
TaiI ACGT 3 cut(s) 799, 967, 1159
TaqI TCGA 5 cut(s) 8, 68, 401, 695, 824
TatI WGTACW 1 cut(s) 1216
TauI GCSGC 1 cut(s) 1290
TfiI GAWTC 7 cut(s) 133, 860, 1108, 1349, 1412, 1535, 1637
Tru1I TTAA 4 cut(s) 96, 756, 1272, 1455
Tru9I TTAA 4 cut(s) 96, 756, 1272, 1455
TscAI CASTG 4 cut(s) 657, 1053, 1144, 1152
TseFI GTSAC 6 cut(s) 209, 500, 778, 1026, 1387, 1548
TseI GCWGC 4 cut(s) 122, 598, 1472, 1557
Tsp45I GTSAC 6 cut(s) 209, 500, 778, 1026, 1387, 1548
TspDTI ATGAA 3 cut(s) 501, 654, 807
TspGWI ACGGA 1 cut(s) 1014
TspRI CASTG 4 cut(s) 657, 1053, 1144, 1152
Vha464I CTTAAG 1 cut(s) 1271
VneI GTGCAC 1 cut(s) 1128
VpaK11BI GGWCC 1 cut(s) 190
XagI CCTNNNNNAGG 1 cut(s) 780
XapI RAATTY 3 cut(s) 492, 522, 1189
XbaI TCTAGA 1 cut(s) 1253
XceI RCATGY 2 cut(s) 579, 1762
XhoI CTCGAG 3 cut(s) 7, 67, 823
XmiI GTMKAC 1 cut(s) 695
XspI CTAG 4 cut(s) 246, 372, 1254, 1323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.