Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003729.1

Orthogroup ID

OG0005035

Physical Location & Seq

Genomic Coordinates Forward (+)

3158 .. 6559

Gene Structure 3402 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003729.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

atggcatcttctcatggtaataatactcactctgaagcagcaatgaaggaacaaataatcactgaattctatgctaaaagtcttcacataattcttgagtcgaggaccccatatgtgtcctcaagaaattatagtggcgaacaagccttgtcgtcgccatcatcttcctcttcgtcctcctcgagtgtgaggccgagggataagtggtttaatttagctctaagagaatgccctgctgcgctggagaatcttgatctctggcgccagagcaattttgaacctatggtggttgatgtggttttggtccagagacgacttgttagtgacccggtggaatgttcacctagaacggatcttgctaggaacttgtcattgaaagagcggtatccatactgttggaattatgagcaggaagatttttggtgtgaggcaaagagtgaaaagattatagagagatgggtactgcggtatgatactcgcaagactagagatacaaaatcagggagtaggaggtcgagcaataatcctttgcagatgttgtataagaaatcaatattactcttgaggtctttgtatgttactgttaggcttttgcctgcttataaaatttatcgtgacctcaattcgtctggccaaattcttccatttactcttgctcaccgggtggcctcttttgctgagcccttcacatgtagagaagatgcagaaatgcagcggtttgagtttacccctgtggatacgggttgtggtaggctttgcctttcagtgttgtattgttcatcactttcagatgtaagctctgaaccatcgactcctatgtctccgcaagttataccagactatgttgggagcccattggcagacccgcttaaaaggttcccatcccttcctgtgacaggatcattatcacgtgccactccattatcgtcttcattctcgaggcgtcatagttggagttatgaccatggtacagattcaccaccttcagtttctttctcaccttcgcctacgcgttcagaacctcatgcttcaatttctaacccaagatctcgccgtttcccacccacaagcttaccacgttatccgcctgaaacatctcttgattataagaaggatataggtttttatgagtattgtccttcacctggcttttctcccgcaccgtccccatcagcctctccatcattgccaatctctattcctggcaatcatgtttcaaaaaatctgttacgatctgagagtgcaccattcagtgccccagtggccaaacgtgctaattcccctgcatcatcccagaagctaaattttcctccatctcccccccttacgagtacaagttctggtacttttaagactgataaagctacagttgggacatcagttgaaaagttattctcttttgggaaaggggaatctagacaatgttctgggcttaagatatcatcaggcggctcaccgcagatatccttttccagaagctccactaggtcttttcctgatgattttgatgattcagagtatccttgcccatttgattatgatgatgatgtgacagaccccggtagcagacctgaatcctttgaccaaaggcatgagcctggaggattatttccaattaaaaaatcccaagatgctgctgttggcgcgcttgtaagaatgctaaagaaagccccacctcttcgccaagatgtctcagattcagtaagtttgtcacaaggctgcaggcctgaaatgtggagtaatagtaaacaagaggccaatctttcttctgagagtcaggcaccagttcagcctgctgattcctcaagtgttatatcgtcagggctcataacatcaaaaactacagctgatgccttagaagagctccaaagttacagggatataaaaaactcgttactggcgcaaagtagtaagtctcacatgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04140 ko04211 map04136 map04138 map04140 map04211

Pfam Domains

Protein Families

ATG13

Protein Analysis

641

Amino Acids

70.85

Weight (kDa)

8.45

Isoelectric Point (pI)

75.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005035)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18770
fragaria_vesca	FvH4_1g23440 FvH4_1g23440 FvH4_1g23440 FvH4_1g23440
malus_domestica	MD01G1001900.v1.1
prunus_persica	Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1 Prupe.6G164000_v2.0.a1
pyrus_communis	pycom01g02590
rosa_chinensis	RchiOBHm_Chr2g0118811
rosa_laevigata	RLG00000018422
rosa_multiflora	Rmu_co8044140.1_g000001 Rmu_sc0001814.1_g000017 Rmu_sc0003729.1_g000001
rosa_roxburghii	Rroxscaffold_2G00124700 Rroxscaffold_2G00125170
rosa_rugosa	Rorug02G0218700 Rorug02G0218800 Rorug02G0218900 Rorug02G0219000
rosa_samantha	Rh2AG276000 Rh2BG287700 Rh2DG282900 Rh2DG302000
rosa_wichuraiana	Rw2G021960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	603, 1107
AasI	GACNNNNNNGTC	1 cut(s)	817
AccB1I	GGYRCC	2 cut(s)	261, 1780
AccBSI	CCGCTC	1 cut(s)	382
AccII	CGCG	2 cut(s)	1012, 1646
AciI	CCGC	9 cut(s)	382, 466, 715, 824, 866, 1085, 1158, 1449, 1457
AclWI	GGATC	2 cut(s)	360, 907
AcoI	YGGCCR	2 cut(s)	631, 1263
AcsI	RAATTY	4 cut(s)	65, 606, 636, 1303
AcuI	CTGAAG	2 cut(s)	54, 969
AcvI	CACGTG	1 cut(s)	911
AcyI	GRCGYC	2 cut(s)	262, 943
AdeI	CACNNNGTG	1 cut(s)	664
AfaI	GTAC	4 cut(s)	462, 970, 1333, 1345
AfiI	CCNNNNNNNGG	2 cut(s)	896, 1145
AflII	CTTAAG	1 cut(s)	1433
AflIII	ACRYGT	3 cut(s)	689, 1010, 1920
AgsI	TTSAA	5 cut(s)	278, 376, 1032, 1218, 1385
AjnI	CCWGG	3 cut(s)	1144, 1201, 1597
AluBI	AGCT	8 cut(s)	218, 798, 1071, 1300, 1364, 1479, 1847, 1864
AluI	AGCT	8 cut(s)	218, 798, 1071, 1300, 1364, 1479, 1847, 1864
Alw21I	GWGCWC	2 cut(s)	1246, 1866
Alw26I	GTCTC	4 cut(s)	304, 825, 1696, 1920
Alw44I	GTGCAC	1 cut(s)	1242
AlwI	GGATC	2 cut(s)	360, 907
Ama87I	CYCGRG	2 cut(s)	181, 937
AoxI	GGCC	6 cut(s)	191, 631, 666, 1263, 1724, 1755
ApaLI	GTGCAC	1 cut(s)	1242
ApeKI	GCWGC	5 cut(s)	38, 236, 712, 1634, 1719
ApoI	RAATTY	4 cut(s)	65, 606, 636, 1303
AspLEI	GCGC	5 cut(s)	241, 264, 1646, 1648, 1903
AspS9I	GGNCC	2 cut(s)	105, 304
AsuC2I	CCSGG	3 cut(s)	329, 662, 1560
AsuHPI	GGTGA	6 cut(s)	333, 650, 969, 990, 1134, 1446
AvaI	CYCGRG	2 cut(s)	181, 937
AvaII	GGWCC	2 cut(s)	105, 304
BaeGI	GKGCMC	2 cut(s)	1246, 1258
BaeI	ACNNNNGTAYC	2 cut(s)	452, 485
BalI	TGGCCA	2 cut(s)	633, 1265
BanI	GGYRCC	2 cut(s)	261, 1780
BanII	GRGCYC	4 cut(s)	684, 854, 1827, 1866
BbrPI	CACGTG	1 cut(s)	911
BbsI	GAAGAC	2 cut(s)	74, 921
Bbv12I	GWGCWC	2 cut(s)	1246, 1866
BbvI	GCAGC	5 cut(s)	50, 223, 724, 1621, 1706
BccI	CCATC	7 cut(s)	166, 450, 814, 889, 1177, 1189, 1321
BceAI	ACGGC	1 cut(s)	1038
BciT130I	CCWGG	3 cut(s)	1146, 1203, 1599
BciVI	GTATCC	3 cut(s)	396, 730, 1530
BcnI	CCSGG	3 cut(s)	329, 662, 1560
BcoDI	GTCTC	4 cut(s)	304, 825, 1696, 1920
BfaI	CTAG	5 cut(s)	345, 360, 486, 1416, 1485
BfmI	CTRYAG	3 cut(s)	1365, 1720, 1842
BfoI	RGCGCY	1 cut(s)	265
BfrI	CTTAAG	1 cut(s)	1433
BfuI	GTATCC	3 cut(s)	396, 730, 1530
BglI	GCCNNNNNGGC	1 cut(s)	1262
BglII	AGATCT	1 cut(s)	1046
BisI	GCNGC	6 cut(s)	39, 237, 713, 1450, 1635, 1720
BlpI	GCTNAGC	1 cut(s)	678
BlsI	GCNGC	6 cut(s)	40, 238, 714, 1451, 1636, 1721
Bme1390I	CCNGG	6 cut(s)	329, 662, 1146, 1203, 1560, 1599
Bme18I	GGWCC	2 cut(s)	105, 304
BmeT110I	CYCGRG	2 cut(s)	181, 937
BmgT120I	GGNCC	2 cut(s)	105, 304
BmiI	GGNNCC	5 cut(s)	107, 263, 851, 878, 1782
BmrFI	CCNGG	6 cut(s)	329, 662, 1146, 1203, 1560, 1599
BmrI	ACTGGG	1 cut(s)	1253
BmsI	GCATC	5 cut(s)	14, 691, 1295, 1621, 1840
BmuI	ACTGGG	1 cut(s)	1253
BpiI	GAAGAC	2 cut(s)	74, 921
BpmI	CTGGAG	2 cut(s)	263, 1620
Bpu1102I	GCTNAGC	1 cut(s)	678
BpuEI	CTTGAG	4 cut(s)	106, 116, 583, 1789
BpuMI	CCSGG	3 cut(s)	329, 662, 1560
BsaAI	YACGTR	1 cut(s)	911
BsaBI	GATNNNNATC	1 cut(s)	904
BsaHI	GRCGYC	2 cut(s)	262, 943
BsaJI	CCNNGG	3 cut(s)	194, 964, 1558
BsaXI	ACNNNNNCTCC	2 cut(s)	1729, 1759
Bsc4I	CCNNNNNNNGG	2 cut(s)	896, 1145
Bse1I	ACTGG	3 cut(s)	1259, 1784, 1902
Bse3DI	GCAATG	2 cut(s)	48, 1184
Bse8I	GATNNNNATC	1 cut(s)	904
BseBI	CCWGG	3 cut(s)	1146, 1203, 1599
BseDI	CCNNGG	3 cut(s)	194, 964, 1558
BseGI	GGATG	2 cut(s)	881, 1289
BseJI	GATNNNNATC	1 cut(s)	904
BseLI	CCNNNNNNNGG	2 cut(s)	896, 1145
BseMI	GCAATG	2 cut(s)	48, 1184
BseMII	CTCAG	4 cut(s)	669, 1227, 1707, 1761
BseNI	ACTGG	3 cut(s)	1259, 1784, 1902
BsePI	GCGCGC	1 cut(s)	1644
BseRI	GAGGAG	1 cut(s)	169
BseSI	GKGCMC	2 cut(s)	1246, 1258
BseXI	GCAGC	5 cut(s)	50, 223, 724, 1621, 1706
Bsh1236I	CGCG	2 cut(s)	1012, 1646
BshFI	GGCC	6 cut(s)	193, 633, 668, 1265, 1726, 1757
BshNI	GGYRCC	2 cut(s)	261, 1780
BsiHKAI	GWGCWC	2 cut(s)	1246, 1866
BsiHKCI	CYCGRG	2 cut(s)	181, 937
BsiSI	CCGG	3 cut(s)	329, 661, 1560
BslFI	GGGAC	2 cut(s)	1150, 1387
BslI	CCNNNNNNNGG	2 cut(s)	896, 1145
BsmAI	GTCTC	4 cut(s)	304, 825, 1696, 1920
BsmBI	CGTCTC	1 cut(s)	304
BsmFI	GGGAC	2 cut(s)	1150, 1387
BsmI	GAATGC	2 cut(s)	233, 1662
BsnI	GGCC	6 cut(s)	193, 633, 668, 1265, 1726, 1757
BsoBI	CYCGRG	2 cut(s)	181, 937
Bsp1286I	GDGCHC	6 cut(s)	684, 854, 1246, 1258, 1827, 1866
Bsp143I	GATC	5 cut(s)	253, 352, 899, 1046, 1232
Bsp1720I	GCTNAGC	1 cut(s)	678
Bsp19I	CCATGG	1 cut(s)	964
BspACI	CCGC	9 cut(s)	382, 466, 715, 824, 866, 1085, 1158, 1449, 1457
BspANI	GGCC	6 cut(s)	193, 633, 668, 1265, 1726, 1757
BspCNI	CTCAG	4 cut(s)	670, 1228, 1706, 1762
BspFNI	CGCG	2 cut(s)	1012, 1646
BspLI	GGNNCC	5 cut(s)	107, 263, 851, 878, 1782
BspMAI	CTGCAG	1 cut(s)	1724
BspPI	GGATC	2 cut(s)	360, 907
BspQI	GCTCTTC	1 cut(s)	1854
BspT107I	GGYRCC	2 cut(s)	261, 1780
BspTI	CTTAAG	1 cut(s)	1433
BsrBI	CCGCTC	1 cut(s)	382
BsrDI	GCAATG	2 cut(s)	48, 1184
BsrI	ACTGG	3 cut(s)	1259, 1784, 1902
BssECI	CCNNGG	3 cut(s)	194, 964, 1558
BssHII	GCGCGC	1 cut(s)	1644
BssMI	GATC	5 cut(s)	253, 352, 899, 1046, 1232
BssNI	GRCGYC	2 cut(s)	262, 943
BssT1I	CCWWGG	1 cut(s)	964
Bst2UI	CCWGG	3 cut(s)	1146, 1203, 1599
Bst4CI	ACNGT	4 cut(s)	395, 583, 1164, 1369
Bst6I	CTCTTC	3 cut(s)	175, 1683, 1854
BstACI	GRCGYC	2 cut(s)	262, 943
BstAFI	CTTAAG	1 cut(s)	1433
BstBAI	YACGTR	1 cut(s)	911
BstC8I	GCNNGC	4 cut(s)	597, 1646, 1724, 1794
BstDEI	CTNAG	6 cut(s)	221, 678, 1236, 1693, 1770, 1855
BstDSI	CCRYGG	1 cut(s)	964
BstENI	CCTNNNNNAGG	1 cut(s)	894
BstF5I	GGATG	2 cut(s)	881, 1289
BstFNI	CGCG	2 cut(s)	1012, 1646
BstH2I	RGCGCY	1 cut(s)	265
BstHHI	GCGC	5 cut(s)	241, 264, 1646, 1648, 1903
BstKTI	GATC	5 cut(s)	256, 355, 902, 1049, 1235
BstMAI	GTCTC	4 cut(s)	304, 825, 1696, 1920
BstMBI	GATC	5 cut(s)	253, 352, 899, 1046, 1232
BstMWI	GCNNNNNNNGC	4 cut(s)	674, 1262, 1271, 1643
BstNI	CCWGG	3 cut(s)	1146, 1203, 1599
BstNSI	RCATGY	2 cut(s)	693, 1924
BstSCI	CCNGG	6 cut(s)	327, 660, 1144, 1201, 1558, 1597
BstSFI	CTRYAG	3 cut(s)	1365, 1720, 1842
BstSLI	GKGCMC	2 cut(s)	1246, 1258
BstUI	CGCG	2 cut(s)	1012, 1646
BstV1I	GCAGC	5 cut(s)	50, 223, 724, 1621, 1706
BstV2I	GAAGAC	2 cut(s)	74, 921
BstX2I	RGATCY	2 cut(s)	352, 1046
BstXI	CCANNNNNNTGG	1 cut(s)	396
BstYI	RGATCY	2 cut(s)	352, 1046
BsuI	GTATCC	3 cut(s)	396, 730, 1530
BsuRI	GGCC	6 cut(s)	193, 633, 668, 1265, 1726, 1757
BtgI	CCRYGG	1 cut(s)	964
BtsCI	GGATG	2 cut(s)	881, 1289
BtsIMutI	CAGTG	4 cut(s)	60, 771, 1258, 1266
Cac8I	GCNNGC	4 cut(s)	597, 1646, 1724, 1794
CfoI	GCGC	5 cut(s)	241, 264, 1646, 1648, 1903
Cfr13I	GGNCC	2 cut(s)	105, 304
CseI	GACGC	1 cut(s)	932
Csp6I	GTAC	4 cut(s)	461, 969, 1332, 1344
CviAII	CATG	7 cut(s)	14, 690, 965, 1025, 1211, 1592, 1921
CviQI	GTAC	4 cut(s)	461, 969, 1332, 1344
DdeI	CTNAG	6 cut(s)	221, 678, 1236, 1693, 1770, 1855
DinI	GGCGCC	1 cut(s)	263
DpnI	GATC	5 cut(s)	255, 354, 901, 1048, 1234
DpnII	GATC	5 cut(s)	253, 352, 899, 1046, 1232
DraIII	CACNNNGTG	1 cut(s)	664
DrdI	GACNNNNNNGTC	1 cut(s)	817
DseDI	GACNNNNNNGTC	1 cut(s)	817
EaeI	YGGCCR	2 cut(s)	631, 1263
Eam1104I	CTCTTC	3 cut(s)	175, 1683, 1854
EarI	CTCTTC	3 cut(s)	175, 1683, 1854
EciI	GGCGGA	1 cut(s)	1074
Ecl136II	GAGCTC	1 cut(s)	1864
Eco130I	CCWWGG	1 cut(s)	964
Eco147I	AGGCCT	1 cut(s)	1726
Eco24I	GRGCYC	4 cut(s)	684, 854, 1827, 1866
Eco32I	GATATC	2 cut(s)	1440, 1464
Eco47I	GGWCC	2 cut(s)	105, 304
Eco53kI	GAGCTC	1 cut(s)	1864
Eco57I	CTGAAG	2 cut(s)	54, 969
Eco72I	CACGTG	1 cut(s)	911
Eco88I	CYCGRG	2 cut(s)	181, 937
EcoICRI	GAGCTC	1 cut(s)	1864
EcoNI	CCTNNNNNAGG	1 cut(s)	894
EcoO109I	RGGNCCY	1 cut(s)	105
EcoRI	GAATTC	1 cut(s)	65
EcoRII	CCWGG	3 cut(s)	1144, 1201, 1597
EcoRV	GATATC	2 cut(s)	1440, 1464
EcoT14I	CCWWGG	1 cut(s)	964
EcoT38I	GRGCYC	4 cut(s)	684, 854, 1827, 1866
EgeI	GGCGCC	1 cut(s)	263
EheI	GGCGCC	1 cut(s)	263
ErhI	CCWWGG	1 cut(s)	964
Esp3I	CGTCTC	1 cut(s)	304
FaeI	CATG	7 cut(s)	17, 693, 968, 1028, 1214, 1595, 1924
FaqI	GGGAC	2 cut(s)	1150, 1387
FatI	CATG	7 cut(s)	13, 689, 964, 1024, 1210, 1591, 1920
FauI	CCCGC	2 cut(s)	873, 1165
FauNDI	CATATG	1 cut(s)	112
Fnu4HI	GCNGC	6 cut(s)	39, 237, 713, 1450, 1635, 1720
FokI	GGATG	2 cut(s)	868, 1276
FriOI	GRGCYC	4 cut(s)	684, 854, 1827, 1866
Fsp4HI	GCNGC	6 cut(s)	39, 237, 713, 1450, 1635, 1720
FspBI	CTAG	5 cut(s)	345, 360, 486, 1416, 1485
GlaI	GCGC	5 cut(s)	240, 263, 1645, 1647, 1902
GluI	GCNGC	6 cut(s)	39, 237, 713, 1450, 1635, 1720
GsuI	CTGGAG	2 cut(s)	263, 1620
HaeII	RGCGCY	1 cut(s)	265
HaeIII	GGCC	6 cut(s)	193, 633, 668, 1265, 1726, 1757
HapII	CCGG	3 cut(s)	329, 661, 1560
HgaI	GACGC	1 cut(s)	932
HhaI	GCGC	5 cut(s)	241, 264, 1646, 1648, 1903
Hin1I	GRCGYC	2 cut(s)	262, 943
Hin1II	CATG	7 cut(s)	17, 693, 968, 1028, 1214, 1595, 1924
Hin6I	GCGC	5 cut(s)	239, 262, 1644, 1646, 1901
HinP1I	GCGC	5 cut(s)	239, 262, 1644, 1646, 1901
HindIII	AAGCTT	1 cut(s)	1069
HpaII	CCGG	3 cut(s)	329, 661, 1560
HphI	GGTGA	6 cut(s)	333, 650, 969, 990, 1134, 1446
Hpy166II	GTNNAC	4 cut(s)	341, 726, 1244, 1748
Hpy188I	TCNGA	8 cut(s)	34, 790, 802, 1018, 1237, 1516, 1696, 1771
Hpy8I	GTNNAC	4 cut(s)	341, 726, 1244, 1748
Hpy99I	CGWCG	1 cut(s)	157
HpyAV	CCTTC	7 cut(s)	40, 694, 896, 993, 1011, 1105, 1149
HpyCH4III	ACNGT	4 cut(s)	395, 583, 1164, 1369
HpyCH4IV	ACGT	3 cut(s)	910, 1078, 1270
HpyCH4V	TGCA	6 cut(s)	532, 704, 712, 1244, 1286, 1722
HpyF10VI	GCNNNNNNNGC	4 cut(s)	674, 1262, 1271, 1643
HpyF3I	CTNAG	6 cut(s)	221, 678, 1236, 1693, 1770, 1855
HpySE526I	ACGT	3 cut(s)	910, 1078, 1270
Hsp92I	GRCGYC	2 cut(s)	262, 943
Hsp92II	CATG	7 cut(s)	17, 693, 968, 1028, 1214, 1595, 1924
HspAI	GCGC	5 cut(s)	239, 262, 1644, 1646, 1901
KasI	GGCGCC	1 cut(s)	261
Kzo9I	GATC	5 cut(s)	253, 352, 899, 1046, 1232
LguI	GCTCTTC	1 cut(s)	1854
LmnI	GCTCC	3 cut(s)	849, 1484, 1869
Lsp1109I	GCAGC	5 cut(s)	50, 223, 724, 1621, 1706
LweI	GCATC	5 cut(s)	14, 691, 1295, 1621, 1840
MaeI	CTAG	5 cut(s)	345, 360, 486, 1416, 1485
MaeII	ACGT	3 cut(s)	910, 1078, 1270
MaeIII	GTNAC	9 cut(s)	323, 577, 614, 892, 1227, 1549, 1710, 1871, 1893
MalI	GATC	5 cut(s)	255, 354, 901, 1048, 1234
MbiI	CCGCTC	1 cut(s)	382
MboI	GATC	5 cut(s)	253, 352, 899, 1046, 1232
MflI	RGATCY	2 cut(s)	352, 1046
MhlI	GDGCHC	6 cut(s)	684, 854, 1246, 1258, 1827, 1866
MlsI	TGGCCA	2 cut(s)	633, 1265
MluI	ACGCGT	1 cut(s)	1010
MluNI	TGGCCA	2 cut(s)	633, 1265
Mly113I	GGCGCC	1 cut(s)	262
MlyI	GAGTC	3 cut(s)	107, 805, 1783
MmeI	TCCRAC	2 cut(s)	377, 932
Mox20I	TGGCCA	2 cut(s)	633, 1265
MscI	TGGCCA	2 cut(s)	633, 1265
MseI	TTAA	5 cut(s)	210, 870, 1350, 1434, 1617
Msp20I	TGGCCA	2 cut(s)	633, 1265
MspA1I	CMGCKG	2 cut(s)	715, 1847
MspCI	CTTAAG	1 cut(s)	1433
MspI	CCGG	3 cut(s)	329, 661, 1560
MspR9I	CCNGG	6 cut(s)	329, 662, 1146, 1203, 1560, 1599
Mva1269I	GAATGC	2 cut(s)	233, 1662
MvaI	CCWGG	3 cut(s)	1146, 1203, 1599
MvnI	CGCG	2 cut(s)	1012, 1646
MwoI	GCNNNNNNNGC	4 cut(s)	674, 1262, 1271, 1643
NarI	GGCGCC	1 cut(s)	262
NciI	CCSGG	3 cut(s)	329, 662, 1560
NcoI	CCATGG	1 cut(s)	964
NdeI	CATATG	1 cut(s)	112
NdeII	GATC	5 cut(s)	253, 352, 899, 1046, 1232
NlaIII	CATG	7 cut(s)	17, 693, 968, 1028, 1214, 1595, 1924
NlaIV	GGNNCC	5 cut(s)	107, 263, 851, 878, 1782
NmeAIII	GCCGAG	1 cut(s)	219
NmuCI	GTSAC	5 cut(s)	323, 614, 892, 1549, 1710
NspI	RCATGY	2 cut(s)	693, 1924
PaeR7I	CTCGAG	2 cut(s)	181, 937
PauI	GCGCGC	1 cut(s)	1644
PceI	AGGCCT	1 cut(s)	1726
PciI	ACATGT	2 cut(s)	689, 1920
PciSI	GCTCTTC	1 cut(s)	1854
PcsI	WCGNNNNNNNCGW	1 cut(s)	179
PctI	GAATGC	2 cut(s)	233, 1662
PfeI	GAWTC	7 cut(s)	247, 974, 1412, 1511, 1574, 1697, 1799
PkrI	GCNGC	6 cut(s)	40, 238, 714, 1451, 1636, 1721
PleI	GAGTC	3 cut(s)	106, 805, 1782
PluTI	GGCGCC	1 cut(s)	265
PmaCI	CACGTG	1 cut(s)	911
PmlI	CACGTG	1 cut(s)	911
PpsI	GAGTC	3 cut(s)	106, 805, 1782
Ppu21I	YACGTR	1 cut(s)	911
PpuMI	RGGWCCY	1 cut(s)	105
PscI	ACATGT	2 cut(s)	689, 1920
PsiI	TTATAA	2 cut(s)	603, 1107
Psp124BI	GAGCTC	1 cut(s)	1866
Psp5II	RGGWCCY	1 cut(s)	105
Psp6I	CCWGG	3 cut(s)	1144, 1201, 1597
PspCI	CACGTG	1 cut(s)	911
PspGI	CCWGG	3 cut(s)	1144, 1201, 1597
PspN4I	GGNNCC	5 cut(s)	107, 263, 851, 878, 1782
PspPI	GGNCC	2 cut(s)	105, 304
PspPPI	RGGWCCY	1 cut(s)	105
PspXI	VCTCGAGB	1 cut(s)	181
PstI	CTGCAG	1 cut(s)	1724
PsuI	RGATCY	2 cut(s)	352, 1046
PteI	GCGCGC	1 cut(s)	1644
PvuII	CAGCTG	1 cut(s)	1847
RsaI	GTAC	4 cut(s)	462, 970, 1333, 1345
RsaNI	GTAC	4 cut(s)	461, 969, 1332, 1344
SacI	GAGCTC	1 cut(s)	1866
SapI	GCTCTTC	1 cut(s)	1854
SaqAI	TTAA	5 cut(s)	210, 870, 1350, 1434, 1617
SatI	GCNGC	6 cut(s)	39, 237, 713, 1450, 1635, 1720
Sau3AI	GATC	5 cut(s)	253, 352, 899, 1046, 1232
Sau96I	GGNCC	2 cut(s)	105, 304
SchI	GAGTC	3 cut(s)	107, 805, 1783
ScrFI	CCNGG	6 cut(s)	329, 662, 1146, 1203, 1560, 1599
SduI	GDGCHC	6 cut(s)	684, 854, 1246, 1258, 1827, 1866
SfaNI	GCATC	5 cut(s)	14, 691, 1295, 1621, 1840
SfcI	CTRYAG	3 cut(s)	1365, 1720, 1842
SfoI	GGCGCC	1 cut(s)	263
Sfr274I	CTCGAG	2 cut(s)	181, 937
SinI	GGWCC	2 cut(s)	105, 304
SlaI	CTCGAG	2 cut(s)	181, 937
SmlI	CTYRAG	7 cut(s)	95, 121, 181, 562, 937, 1433, 1804
SmoI	CTYRAG	7 cut(s)	95, 121, 181, 562, 937, 1433, 1804
SseBI	AGGCCT	1 cut(s)	1726
SsiI	CCGC	9 cut(s)	382, 466, 715, 824, 866, 1085, 1158, 1449, 1457
SspDI	GGCGCC	1 cut(s)	261
SspI	AATATT	1 cut(s)	555
SspMI	CTAG	5 cut(s)	345, 360, 486, 1416, 1485
SstI	GAGCTC	1 cut(s)	1866
StuI	AGGCCT	1 cut(s)	1726
StyD4I	CCNGG	6 cut(s)	327, 660, 1144, 1201, 1558, 1597
StyI	CCWWGG	1 cut(s)	964
TaaI	ACNGT	4 cut(s)	395, 583, 1164, 1369
TaiI	ACGT	3 cut(s)	913, 1081, 1273
TaqI	TCGA	5 cut(s)	101, 182, 515, 809, 938
TatI	WGTACW	1 cut(s)	1331
TauI	GCSGC	1 cut(s)	1452
TfiI	GAWTC	7 cut(s)	247, 974, 1412, 1511, 1574, 1697, 1799
Tru1I	TTAA	5 cut(s)	210, 870, 1350, 1434, 1617
Tru9I	TTAA	5 cut(s)	210, 870, 1350, 1434, 1617
TscAI	CASTG	4 cut(s)	67, 771, 1258, 1266
TseFI	GTSAC	5 cut(s)	323, 614, 892, 1549, 1710
TseI	GCWGC	5 cut(s)	38, 236, 712, 1634, 1719
Tsp45I	GTSAC	5 cut(s)	323, 614, 892, 1549, 1710
TspDTI	ATGAA	3 cut(s)	59, 768, 921
TspGWI	ACGGA	1 cut(s)	365
TspRI	CASTG	4 cut(s)	67, 771, 1258, 1266
Vha464I	CTTAAG	1 cut(s)	1433
VneI	GTGCAC	1 cut(s)	1242
VpaK11BI	GGWCC	2 cut(s)	105, 304
XagI	CCTNNNNNAGG	1 cut(s)	894
XapI	RAATTY	4 cut(s)	65, 606, 636, 1303
XbaI	TCTAGA	1 cut(s)	1415
XceI	RCATGY	2 cut(s)	693, 1924
XhoI	CTCGAG	2 cut(s)	181, 937
XspI	CTAG	5 cut(s)	345, 360, 486, 1416, 1485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.