Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0003916

Physical Location & Seq

Genomic Coordinates Reverse (-)

24375179 .. 24377455

Gene Structure 2277 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1134200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGGCTACCACCAAGCTTCTCCTCTCCCTTCTCCTCCTCGTTCAGCTCGCCGCCACTGCCTACTCCATCGGCGTAAACTACGGTACTCTCGCCGACAACCTCCCGCCCCCGGCCCAAGTCGCCAACTTCCTCAAAACACAAACCAACATCGACGCCGTCAAAATCTTCGACGCCAACCCCGACATCATCAAGGCCTTCGCCAACTCCAACATCTCCTTGACTATCACCGTCCCCAACGGCGAGATCCCAAGCCTCACCAAGCTCCGCACTGCTCGCCGTTGGATCATTGATCACGTCAAGCCGTTTTACCCTGCAAGCAAAATCAAGTACATTGGCATGGGAAACGAGGTCCTTCACTGGGGGGACGATGCTCTCAAGTCGAGCCTCGTCCCTGCCATGAAGACTTTGAACAACGCTTTGGTCCTCGAGGGGATTAAAGACGTCAAAGTCTCTACCCCTCACTCGCTCGGAATCATGTTGGCCTCCGAACCCCCCAGCATGGGCAGGTTCAGACCTGAAGTGATTCCAATTCTGACCCAAATGCTCCGGTTCTGTAGCCAAACCAAATCGCCTTTCATGGTCAATCCGTATCCGTACTTCGGGTGGTCACCCGAAAAGGAGAACTACGCTCTTTTCGGACCAAACGAGGGAGTGCACGATAAATTCACCGGCAAGTTTTACACTAACATGTTCGATGGGTTGATGGACGCGGTTTACTCAGCTGCCAAGGCAATCGGGTTCAGTGACGTGAACTTGATTGCGGCCGAGACCGGTTGGCCTTCGGCTTGCGAGTTCCCGGTTTGCTCGGTTCAGAACGCTGTGGATTACAACCGGAACTTGATCAAGCATGTTGAGTCTGGGAAGGGTACGCCATTGATGCCGAACCGTAAGTTCGAGACTTACATCTTTGCTTTGTTCAATGAGAACCAGAAACCCGGTCCCGCCGCAGAGAAGAACTGGGGGCTGTTCAAACCGGACATGACTCCGGTTTACAATGCTGGGGTTATGCGCAATCAACAGGGTGGTGCAACTCCTGGACCAACAATGAAAATTCCAACACAACCTTCTACACCAGCCGCACCAAAAAGCGGGAAACAGGGAAAGCCTGCCAAACCAGCAAAACCGGCAACACCGGCAGCAGGAGGCAACAACAGCGGCAAGAAGTGGTGCGTGGCAAAACCAGGAGCCACGGACCAAGCATTGCAATCAAACATTGACTACATCTGCGGCACCGGCGTTGACTGCAAGTCCGTTCAGCCAGGCGGCGCTTGCTTCGATAACAACGTTAGGGCCCGTGCGTCTTACCTCATGAATACATACTACCAGGCTAACGGCCTTCATGACTTTAACTGTGATTTCTCTGGGTCCGGACAAATCACCACCACTGACCCAAGCCGCGGCTCTTGTAAATACAACGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001871 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016043 GO:0016787 GO:0016798 GO:0022414 GO:0022607 GO:0030198 GO:0030246 GO:0030247 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0044085 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0048229 GO:0048316 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0061458 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17 X8

Protein Analysis

474

Amino Acids

51.18

Weight (kDa)

9.06

Isoelectric Point (pI)

31.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_17	PF00332	23 - 332	4.5e-80	Glycosyl hydrolases family 17
X8	PF07983	388 - 457	1.4e-19	X8 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003916)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55430
fragaria_vesca	FvH4_7g22480 FvH4_7g22494
malus_domestica	MD01G1134200.v1.1 MD07G1198400.v1.1 MD07G1198600.v1.1 MD07G1198700.v1.1
prunus_persica	Prupe.2G235400_v2.0.a1
pyrus_communis	pycom01g15500 pycom07g18550 pycom07g18560 pycom07g18600
rosa_chinensis	RchiOBHm_Chr1g0367091 RchiOBHm_Chr1g0367121
rosa_laevigata	RLG00000027296 RLG00000027300
rosa_multiflora	Rmu_co8239959.1_g000001 Rmu_co8287615.1_g000001 Rmu_sc0007424.1_g000003 Rmu_sc0007844.1_g000002
rosa_roxburghii	Rroxscaffold_4G00289610 Rroxscaffold_4G00289630
rosa_rugosa	Rorug01G0334300 Rorug01G0334700 Rorug01G0334800
rosa_samantha	Rh1AG341300 Rh1AG341500 Rh1BG302000 Rh1CG318000 Rh1CG318400 Rh1DG334200 Rh1DG334500
rosa_wichuraiana	Rw1G030320 Rw1G030350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	446
AatII	GACGTC	1 cut(s)	444
AbsI	CCTCGAGG	1 cut(s)	425
Acc16I	TGCGCA	1 cut(s)	1010
Acc36I	ACCTGC	1 cut(s)	495
AccB1I	GGYRCC	1 cut(s)	1229
AccII	CGCG	2 cut(s)	710, 1398
AccIII	TCCGGA	1 cut(s)	1367
AclI	AACGTT	1 cut(s)	1284
AclWI	GGATC	2 cut(s)	238, 290
AcoI	YGGCCR	1 cut(s)	762
AcsI	RAATTY	2 cut(s)	662, 1050
AcuI	CTGAAG	1 cut(s)	537
AcyI	GRCGYC	3 cut(s)	153, 171, 441
AfaI	GTAC	4 cut(s)	85, 329, 596, 868
AfiI	CCNNNNNNNGG	9 cut(s)	109, 358, 499, 500, 599, 647, 1088, 1139, 1397
AflIII	ACRYGT	1 cut(s)	687
AgeI	ACCGGT	1 cut(s)	770
AgsI	TTSAA	3 cut(s)	409, 919, 970
AhdI	GACNNNNNGTC	1 cut(s)	1246
AjiI	CACGTC	2 cut(s)	295, 748
AjnI	CCWGG	4 cut(s)	1033, 1180, 1258, 1323
AjuI	GAANNNNNNNTTGG	6 cut(s)	401, 433, 557, 589, 1048, 1080
AluBI	AGCT	4 cut(s)	16, 46, 262, 722
AluI	AGCT	4 cut(s)	16, 46, 262, 722
Alw21I	GWGCWC	1 cut(s)	657
Alw26I	GTCTC	3 cut(s)	454, 761, 890
Alw44I	GTGCAC	1 cut(s)	653
AlwI	GGATC	2 cut(s)	238, 290
Ama87I	CYCGRG	1 cut(s)	425
Aor13HI	TCCGGA	1 cut(s)	1367
AoxI	GGCC	7 cut(s)	111, 192, 480, 762, 776, 1290, 1333
ApaI	GGGCCC	1 cut(s)	1294
ApaLI	GTGCAC	1 cut(s)	653
ApeKI	GCWGC	2 cut(s)	722, 1136
ApoI	RAATTY	2 cut(s)	662, 1050
AsiGI	ACCGGT	1 cut(s)	770
Asp700I	GAANNNNTTC	1 cut(s)	522
AspLEI	GCGC	2 cut(s)	1011, 1268
AsuC2I	CCSGG	3 cut(s)	110, 797, 936
AsuHPI	GGTGA	5 cut(s)	217, 247, 600, 658, 1369
AvaI	CYCGRG	1 cut(s)	425
AvaII	GGWCC	7 cut(s)	349, 421, 638, 938, 1037, 1192, 1365
BaeGI	GKGCMC	2 cut(s)	657, 1294
BanI	GGYRCC	1 cut(s)	1229
BanII	GRGCYC	1 cut(s)	1294
BarI	GAAGNNNNNNTAC	2 cut(s)	581, 613
BbsI	GAAGAC	1 cut(s)	407
Bbv12I	GWGCWC	1 cut(s)	657
BbvI	GCAGC	2 cut(s)	709, 1148
BccI	CCATC	3 cut(s)	74, 689, 697
BceAI	ACGGC	5 cut(s)	140, 253, 261, 286, 1348
BciT130I	CCWGG	4 cut(s)	1035, 1182, 1260, 1325
BciVI	GTATCC	1 cut(s)	600
BclI	TGATCA	2 cut(s)	289, 840
BcnI	CCSGG	3 cut(s)	110, 797, 936
BcoDI	GTCTC	3 cut(s)	454, 761, 890
BfmI	CTRYAG	1 cut(s)	553
BfoI	RGCGCY	1 cut(s)	1269
BfuAI	ACCTGC	1 cut(s)	495
BfuI	GTATCC	1 cut(s)	600
Bme1390I	CCNGG	7 cut(s)	110, 797, 936, 1035, 1182, 1260, 1325
Bme18I	GGWCC	7 cut(s)	349, 421, 638, 938, 1037, 1192, 1365
BmeRI	GACNNNNNGTC	1 cut(s)	1246
BmeT110I	CYCGRG	1 cut(s)	425
BmgBI	CACGTC	2 cut(s)	295, 748
BmiI	GGNNCC	5 cut(s)	940, 1186, 1231, 1292, 1366
BmrFI	CCNGG	7 cut(s)	110, 797, 936, 1035, 1182, 1260, 1325
BmrI	ACTGGG	2 cut(s)	367, 967
BmsI	GCATC	2 cut(s)	358, 867
BmuI	ACTGGG	2 cut(s)	367, 967
BpiI	GAAGAC	1 cut(s)	407
BpuEI	CTTGAG	1 cut(s)	359
BpuMI	CCSGG	3 cut(s)	110, 797, 936
BsaHI	GRCGYC	3 cut(s)	153, 171, 441
BsaI	GGTCTC	1 cut(s)	761
BsaJI	CCNNGG	4 cut(s)	108, 726, 1188, 1396
BsaWI	WCCGGW	6 cut(s)	546, 770, 831, 973, 985, 1367
Bsc4I	CCNNNNNNNGG	9 cut(s)	109, 358, 499, 500, 599, 647, 1088, 1139, 1397
Bse118I	RCCGGY	5 cut(s)	668, 770, 1123, 1132, 1232
Bse1I	ACTGG	2 cut(s)	362, 962
Bse3DI	GCAATG	1 cut(s)	1199
BseAI	TCCGGA	1 cut(s)	1367
BseBI	CCWGG	4 cut(s)	1035, 1182, 1260, 1325
BseDI	CCNNGG	4 cut(s)	108, 726, 1188, 1396
BseLI	CCNNNNNNNGG	9 cut(s)	109, 358, 499, 500, 599, 647, 1088, 1139, 1397
BseMI	GCAATG	1 cut(s)	1199
BseMII	CTCAG	1 cut(s)	732
BseNI	ACTGG	2 cut(s)	362, 962
BseRI	GAGGAG	3 cut(s)	11, 23, 26
BseSI	GKGCMC	2 cut(s)	657, 1294
BseX3I	CGGCCG	1 cut(s)	762
BseXI	GCAGC	2 cut(s)	709, 1148
BseYI	CCCAGC	2 cut(s)	494, 998
Bsh1236I	CGCG	2 cut(s)	710, 1398
Bsh1285I	CGRYCG	1 cut(s)	765
BshFI	GGCC	7 cut(s)	113, 194, 482, 764, 778, 1292, 1335
BshNI	GGYRCC	1 cut(s)	1229
BshTI	ACCGGT	1 cut(s)	770
BsiEI	CGRYCG	1 cut(s)	765
BsiHKAI	GWGCWC	1 cut(s)	657
BsiHKCI	CYCGRG	1 cut(s)	425
BslFI	GGGAC	4 cut(s)	215, 374, 377, 924
BslI	CCNNNNNNNGG	9 cut(s)	109, 358, 499, 500, 599, 647, 1088, 1139, 1397
BsmAI	GTCTC	3 cut(s)	454, 761, 890
BsmFI	GGGAC	4 cut(s)	215, 374, 377, 924
BsnI	GGCC	7 cut(s)	113, 194, 482, 764, 778, 1292, 1335
Bso31I	GGTCTC	1 cut(s)	761
BsoBI	CYCGRG	1 cut(s)	425
Bsp120I	GGGCCC	1 cut(s)	1290
Bsp1286I	GDGCHC	2 cut(s)	657, 1294
Bsp13I	TCCGGA	1 cut(s)	1367
Bsp143I	GATC	4 cut(s)	243, 282, 289, 840
BspANI	GGCC	7 cut(s)	113, 194, 482, 764, 778, 1292, 1335
BspCNI	CTCAG	1 cut(s)	731
BspEI	TCCGGA	1 cut(s)	1367
BspFNI	CGCG	2 cut(s)	710, 1398
BspHI	TCATGA	2 cut(s)	1308, 1339
BspLI	GGNNCC	5 cut(s)	940, 1186, 1231, 1292, 1366
BspMI	ACCTGC	1 cut(s)	495
BspPI	GGATC	2 cut(s)	238, 290
BspT107I	GGYRCC	1 cut(s)	1229
BspTNI	GGTCTC	1 cut(s)	761
BsrDI	GCAATG	1 cut(s)	1199
BsrFI	RCCGGY	5 cut(s)	668, 770, 1123, 1132, 1232
BsrI	ACTGG	2 cut(s)	362, 962
BssAI	RCCGGY	5 cut(s)	668, 770, 1123, 1132, 1232
BssECI	CCNNGG	4 cut(s)	108, 726, 1188, 1396
BssMI	GATC	4 cut(s)	243, 282, 289, 840
BssNI	GRCGYC	3 cut(s)	153, 171, 441
BssT1I	CCWWGG	1 cut(s)	726
Bst2UI	CCWGG	4 cut(s)	1035, 1182, 1260, 1325
Bst4CI	ACNGT	4 cut(s)	83, 229, 887, 1352
BstACI	GRCGYC	3 cut(s)	153, 171, 441
BstC8I	GCNNGC	6 cut(s)	48, 274, 316, 787, 1107, 1270
BstDEI	CTNAG	1 cut(s)	718
BstDSI	CCRYGG	2 cut(s)	1188, 1396
BstEII	GGTNACC	1 cut(s)	606
BstFNI	CGCG	2 cut(s)	710, 1398
BstH2I	RGCGCY	1 cut(s)	1269
BstHHI	GCGC	2 cut(s)	1011, 1268
BstKTI	GATC	4 cut(s)	246, 285, 292, 843
BstMAI	GTCTC	3 cut(s)	454, 761, 890
BstMBI	GATC	4 cut(s)	243, 282, 289, 840
BstMCI	CGRYCG	1 cut(s)	765
BstNI	CCWGG	4 cut(s)	1035, 1182, 1260, 1325
BstNSI	RCATGY	2 cut(s)	691, 851
BstPI	GGTNACC	1 cut(s)	606
BstSCI	CCNGG	7 cut(s)	108, 795, 934, 1033, 1180, 1258, 1323
BstSFI	CTRYAG	1 cut(s)	553
BstSLI	GKGCMC	2 cut(s)	657, 1294
BstUI	CGCG	2 cut(s)	710, 1398
BstV1I	GCAGC	2 cut(s)	709, 1148
BstV2I	GAAGAC	1 cut(s)	407
BstX2I	RGATCY	1 cut(s)	243
BstYI	RGATCY	1 cut(s)	243
BstZI	CGGCCG	1 cut(s)	762
BsuI	GTATCC	1 cut(s)	600
BsuRI	GGCC	7 cut(s)	113, 194, 482, 764, 778, 1292, 1335
BtgI	CCRYGG	2 cut(s)	1188, 1396
BtrI	CACGTC	2 cut(s)	295, 748
BtsI	GCAGTG	2 cut(s)	54, 267
BtsIMutI	CAGTG	5 cut(s)	54, 267, 355, 748, 1383
BveI	ACCTGC	1 cut(s)	495
Cac8I	GCNNGC	6 cut(s)	48, 274, 316, 787, 1107, 1270
CciI	TCATGA	2 cut(s)	1308, 1339
CfoI	GCGC	2 cut(s)	1011, 1268
Cfr10I	RCCGGY	5 cut(s)	668, 770, 1123, 1132, 1232
Cfr42I	CCGCGG	1 cut(s)	1399
CseI	GACGC	4 cut(s)	161, 179, 716, 1287
Csp6I	GTAC	4 cut(s)	84, 328, 595, 867
CspAI	ACCGGT	1 cut(s)	770
CviQI	GTAC	4 cut(s)	84, 328, 595, 867
DdeI	CTNAG	1 cut(s)	718
DpnI	GATC	4 cut(s)	245, 284, 291, 842
DpnII	GATC	4 cut(s)	243, 282, 289, 840
DrdI	GACNNNNNNGTC	1 cut(s)	446
DriI	GACNNNNNGTC	1 cut(s)	1246
DseDI	GACNNNNNNGTC	1 cut(s)	446
EaeI	YGGCCR	1 cut(s)	762
EagI	CGGCCG	1 cut(s)	762
Eam1105I	GACNNNNNGTC	1 cut(s)	1246
EclXI	CGGCCG	1 cut(s)	762
Eco130I	CCWWGG	1 cut(s)	726
Eco147I	AGGCCT	1 cut(s)	194
Eco24I	GRGCYC	1 cut(s)	1294
Eco31I	GGTCTC	1 cut(s)	761
Eco47I	GGWCC	7 cut(s)	349, 421, 638, 938, 1037, 1192, 1365
Eco52I	CGGCCG	1 cut(s)	762
Eco57I	CTGAAG	1 cut(s)	537
Eco88I	CYCGRG	1 cut(s)	425
Eco91I	GGTNACC	1 cut(s)	606
EcoO109I	RGGNCCY	2 cut(s)	349, 1290
EcoO65I	GGTNACC	1 cut(s)	606
EcoRII	CCWGG	4 cut(s)	1033, 1180, 1258, 1323
EcoT14I	CCWWGG	1 cut(s)	726
EcoT38I	GRGCYC	1 cut(s)	1294
ErhI	CCWWGG	1 cut(s)	726
FaqI	GGGAC	4 cut(s)	215, 374, 377, 924
FauI	CCCGC	3 cut(s)	111, 949, 1082
FbaI	TGATCA	2 cut(s)	289, 840
FriOI	GRGCYC	1 cut(s)	1294
FspI	TGCGCA	1 cut(s)	1010
GlaI	GCGC	2 cut(s)	1010, 1267
GsaI	CCCAGC	2 cut(s)	498, 1002
HaeII	RGCGCY	1 cut(s)	1269
HaeIII	GGCC	7 cut(s)	113, 194, 482, 764, 778, 1292, 1335
HgaI	GACGC	4 cut(s)	161, 179, 716, 1287
HhaI	GCGC	2 cut(s)	1011, 1268
Hin1I	GRCGYC	3 cut(s)	153, 171, 441
Hin6I	GCGC	2 cut(s)	1009, 1266
HinP1I	GCGC	2 cut(s)	1009, 1266
HincII	GTYRAC	1 cut(s)	1240
HindII	GTYRAC	1 cut(s)	1240
HindIII	AAGCTT	1 cut(s)	14
HinfI	GANTC	4 cut(s)	471, 523, 854, 982
HphI	GGTGA	5 cut(s)	217, 247, 600, 658, 1369
Hpy166II	GTNNAC	6 cut(s)	76, 655, 715, 751, 991, 1240
Hpy188I	TCNGA	6 cut(s)	470, 487, 512, 534, 638, 813
Hpy188III	TCNNGA	4 cut(s)	895, 1309, 1340, 1368
Hpy8I	GTNNAC	6 cut(s)	76, 655, 715, 751, 991, 1240
Hpy99I	CGWCG	2 cut(s)	155, 173
HpyAV	CCTTC	7 cut(s)	38, 205, 362, 789, 856, 1074, 1346
HpyCH4III	ACNGT	4 cut(s)	83, 229, 887, 1352
HpyCH4IV	ACGT	4 cut(s)	294, 441, 747, 1284
HpyCH4V	TGCA	5 cut(s)	314, 655, 1028, 1204, 1245
HpyF3I	CTNAG	1 cut(s)	718
HpySE526I	ACGT	4 cut(s)	294, 441, 747, 1284
Hsp92I	GRCGYC	3 cut(s)	153, 171, 441
HspAI	GCGC	2 cut(s)	1009, 1266
Kpn2I	TCCGGA	1 cut(s)	1367
Ksp22I	TGATCA	2 cut(s)	289, 840
KspI	CCGCGG	1 cut(s)	1399
Kzo9I	GATC	4 cut(s)	243, 282, 289, 840
LmnI	GCTCC	3 cut(s)	267, 549, 1184
Lsp1109I	GCAGC	2 cut(s)	709, 1148
LweI	GCATC	2 cut(s)	358, 867
MaeII	ACGT	4 cut(s)	294, 441, 747, 1284
MaeIII	GTNAC	2 cut(s)	606, 743
MalI	GATC	4 cut(s)	245, 284, 291, 842
MboI	GATC	4 cut(s)	243, 282, 289, 840
MboII	GAAGA	3 cut(s)	157, 412, 964
MflI	RGATCY	1 cut(s)	243
MhlI	GDGCHC	2 cut(s)	657, 1294
MluCI	AATT	3 cut(s)	528, 662, 1050
MlyI	GAGTC	2 cut(s)	863, 976
MmeI	TCCRAC	3 cut(s)	231, 260, 1079
MroI	TCCGGA	1 cut(s)	1367
MroXI	GAANNNNTTC	1 cut(s)	522
MseI	TTAA	2 cut(s)	435, 1347
MslI	CAYNNNNRTG	2 cut(s)	335, 686
MspA1I	CMGCKG	3 cut(s)	722, 1155, 1398
MspR9I	CCNGG	7 cut(s)	110, 797, 936, 1035, 1182, 1260, 1325
MvaI	CCWGG	4 cut(s)	1035, 1182, 1260, 1325
MvnI	CGCG	2 cut(s)	710, 1398
NciI	CCSGG	3 cut(s)	110, 797, 936
NdeII	GATC	4 cut(s)	243, 282, 289, 840
NlaIV	GGNNCC	5 cut(s)	940, 1186, 1231, 1292, 1366
NmeAIII	GCCGAG	1 cut(s)	790
NmuCI	GTSAC	2 cut(s)	606, 743
NsbI	TGCGCA	1 cut(s)	1010
NspI	RCATGY	2 cut(s)	691, 851
PaeR7I	CTCGAG	1 cut(s)	425
PagI	TCATGA	2 cut(s)	1308, 1339
PceI	AGGCCT	1 cut(s)	194
PciI	ACATGT	1 cut(s)	687
PcsI	WCGNNNNNNNCGW	3 cut(s)	177, 642, 1281
PdmI	GAANNNNTTC	1 cut(s)	522
PfeI	GAWTC	2 cut(s)	471, 523
PflFI	GACNNNGTC	1 cut(s)	155
PfoI	TCCNGGA	1 cut(s)	1033
PinAI	ACCGGT	1 cut(s)	770
PleI	GAGTC	2 cut(s)	862, 976
PpsI	GAGTC	2 cut(s)	862, 976
PpuMI	RGGWCCY	1 cut(s)	349
PscI	ACATGT	1 cut(s)	687
Psp1406I	AACGTT	1 cut(s)	1284
Psp5II	RGGWCCY	1 cut(s)	349
Psp6I	CCWGG	4 cut(s)	1033, 1180, 1258, 1323
PspEI	GGTNACC	1 cut(s)	606
PspFI	CCCAGC	2 cut(s)	494, 998
PspGI	CCWGG	4 cut(s)	1033, 1180, 1258, 1323
PspN4I	GGNNCC	5 cut(s)	940, 1186, 1231, 1292, 1366
PspOMI	GGGCCC	1 cut(s)	1290
PspPPI	RGGWCCY	1 cut(s)	349
PspXI	VCTCGAGB	1 cut(s)	425
PsuI	RGATCY	1 cut(s)	243
PsyI	GACNNNGTC	1 cut(s)	155
PvuII	CAGCTG	1 cut(s)	722
RsaI	GTAC	4 cut(s)	85, 329, 596, 868
RsaNI	GTAC	4 cut(s)	84, 328, 595, 867
RseI	CAYNNNNRTG	2 cut(s)	335, 686
SacII	CCGCGG	1 cut(s)	1399
SaqAI	TTAA	2 cut(s)	435, 1347
Sau3AI	GATC	4 cut(s)	243, 282, 289, 840
SchI	GAGTC	2 cut(s)	863, 976
ScrFI	CCNGG	7 cut(s)	110, 797, 936, 1035, 1182, 1260, 1325
SduI	GDGCHC	2 cut(s)	657, 1294
SfaNI	GCATC	2 cut(s)	358, 867
SfcI	CTRYAG	1 cut(s)	553
Sfr274I	CTCGAG	1 cut(s)	425
Sfr303I	CCGCGG	1 cut(s)	1399
SgrAI	CRCCGGYG	1 cut(s)	1232
SgrBI	CCGCGG	1 cut(s)	1399
SinI	GGWCC	7 cut(s)	349, 421, 638, 938, 1037, 1192, 1365
SlaI	CTCGAG	1 cut(s)	425
SmiMI	CAYNNNNRTG	2 cut(s)	335, 686
SmlI	CTYRAG	2 cut(s)	374, 425
SmoI	CTYRAG	2 cut(s)	374, 425
Sse9I	AATT	3 cut(s)	528, 662, 1050
SseBI	AGGCCT	1 cut(s)	194
StuI	AGGCCT	1 cut(s)	194
StyD4I	CCNGG	7 cut(s)	108, 795, 934, 1033, 1180, 1258, 1323
StyI	CCWWGG	1 cut(s)	726
TaaI	ACNGT	4 cut(s)	83, 229, 887, 1352
TaiI	ACGT	4 cut(s)	297, 444, 750, 1287
TaqI	TCGA	7 cut(s)	150, 168, 380, 426, 693, 894, 1275
TasI	AATT	3 cut(s)	528, 662, 1050
TatI	WGTACW	1 cut(s)	327
TauI	GCSGC	9 cut(s)	53, 764, 947, 1079, 1158, 1230, 1266, 1398, 1401
TfiI	GAWTC	2 cut(s)	471, 523
Tru1I	TTAA	2 cut(s)	435, 1347
Tru9I	TTAA	2 cut(s)	435, 1347
TscAI	CASTG	5 cut(s)	61, 274, 362, 748, 1390
TseFI	GTSAC	2 cut(s)	606, 743
TseI	GCWGC	2 cut(s)	722, 1136
Tsp45I	GTSAC	2 cut(s)	606, 743
TspDTI	ATGAA	5 cut(s)	413, 565, 1061, 1325, 1328
TspGWI	ACGGA	4 cut(s)	576, 582, 1205, 1240
TspRI	CASTG	5 cut(s)	61, 274, 362, 748, 1390
Tth111I	GACNNNGTC	1 cut(s)	155
VneI	GTGCAC	1 cut(s)	653
VpaK11BI	GGWCC	7 cut(s)	349, 421, 638, 938, 1037, 1192, 1365
XapI	RAATTY	2 cut(s)	662, 1050
XceI	RCATGY	2 cut(s)	691, 851
XhoI	CTCGAG	1 cut(s)	425
XmnI	GAANNNNTTC	1 cut(s)	522
ZraI	GACGTC	1 cut(s)	442

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.