Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0003916

Physical Location & Seq

Genomic Coordinates Forward (+)

45295225 .. 45302447

Gene Structure 7223 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0334800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGGCTCAGATTCCCAATTTGGACAATGCTCCTCTCAATCTCACACATCTCAGGGAACAGTCTCAGAAGGAACTCGTAAACATCCTCAAGAATATTCGAGGAAAGAAGTGCTTGGTGGTCGATCCGAAGCTCAGCGGCTCAATCTCGTTGATCATCCAGACTGCAATTCTCAAAGAACAAGGGGTTGAACTGCGGCATCTTTCGGCTGAGACTATTCAAACTGACTGTTCCAAAGTAGTTTACCTTGTACGCTCGCAGCTCAGTTTGATGAAATACATTAGCTCGCATATTCACAATGATATTTCCAAAGGATTACAGAGAGAATACTTACTTTATTTTGTCCCTCGTCGTTCGGTTGCTTGTGAGAAGATCCTCGAGGAGGAAAAAGTCCACAACTTGTTGACTATAGGGGAGTACCAGCTATACACTGTTCCGTTGGACGAGGATGTTCTGTCATTTGAACTTGATCAATCTAGCAAGGAGTGCCTAGTTGATGGTGATACAAGCTCACTTTGGCATATTGCAAAAGCCATTCACAAGCTCGAGTTTTCTTTTGGGGTAATACCAAATGTGAGGGCAAAAGGAAAAGCATCAGTACGTGTTGCTGACATTCTAAACCGCATGCAAGCAGAGGAACCGGTTAACTCACCAGATGTGGTTGTTCCAGAGATAAATACACTCGTCCTTTTAGATCGTGAGGTGGACATGGTTACTCCCATGTGTACTCAGTTAACATACGAGGGGCTTCTGGATGAGTTTTTGCATATCAGTAATGGTTCTGTAGAGGTTGACTCATCCATGATGGGTGGCCAACAAGAGGGAAAGAAGATGAAAGTTCCACTTAATTCAAGTGACAAGCTGTTTAAAGAGACACGAGATCTCAACTTTGAAGTTGTTGTCCAGATTCTACGTCAAAAAGCAACATCCATGAAGCAGGACTACACTGAGGTGACTTCAAATAGCCAGACAGTTTCTGAATTGAAGGATTTTGTCAAAAAGCTGAACTCGTTGCCAGAAATGACCAGGCACATAAATCTTGCTCAGCATCTGACGACTATCACATCAAAGTCATCTTTCCTTGGACAACTTGACATGGAACACACAATTATTGAGGGTCAGAGTTTTGACATGTGCTTAGAATACATTGAAGAACTGATCCATAAGCAGGAGCCCCTTGTAACTGTCCTCCGTCTCCTCATCTTATTTTCCATCACAAATTCTGGGTTGCCTAAGAAGAATTTTGACTATTTGAGGAGGGAACTACTCCATAGTTATGGGTTTGAGCACATGGTTACATTGAAAAATCTAGAGAAAGCTGGATTGTTTAAAAAGCAGGAGACAAAAACCAACTGGCTGACAGTTAAGCGTGCATTACAACTCGTTGTTGAAGACACTGACACTGCAAACCCCAATGACATCGCCTATGCCTTTTCTGGATATGCGCCTCTTAGCATTCGCCTCGTCCAGCACGCTGTTAGATCTGGATGGCGTCCTATTGAAGAGATTCTGAAGCTGTTACCTGGACCACATTCAGAAACAAAGAGAGGTCGATTCTCAAGCAGCGCATCATTTGACACTTTGCAGGGGGCGGCGAACAATGTAGACAAGGTAGCTGATGGGAGGCGCTCCCTTGTGCTTGTCGTATTCATCGGAGGTGTAACATTTGCAGAGATTTCTGCCCTTCGATTTCTCAGTTCTCAGGAAGGAATGGCGTATGATTTGATAGTTGGGACAACAAAAATAGTCAGTGGCCATAGCTTGACGGAAACTTTTGTGGGGAAGATGGATGACCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001871 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016043 GO:0016787 GO:0016798 GO:0022414 GO:0022607 GO:0030198 GO:0030246 GO:0030247 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0044085 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0048229 GO:0048316 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0061458 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17 X8

Protein Analysis

598

Amino Acids

67.26

Weight (kDa)

6.06

Isoelectric Point (pI)

50.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec1	PF00995	36 - 588	1.7e-117	Sec1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003916)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55430
fragaria_vesca	FvH4_7g22480 FvH4_7g22494
malus_domestica	MD01G1134200.v1.1 MD07G1198400.v1.1 MD07G1198600.v1.1 MD07G1198700.v1.1
prunus_persica	Prupe.2G235400_v2.0.a1
pyrus_communis	pycom01g15500 pycom07g18550 pycom07g18560 pycom07g18600
rosa_chinensis	RchiOBHm_Chr1g0367091 RchiOBHm_Chr1g0367121
rosa_laevigata	RLG00000027296 RLG00000027300
rosa_multiflora	Rmu_co8239959.1_g000001 Rmu_co8287615.1_g000001 Rmu_sc0007424.1_g000003 Rmu_sc0007844.1_g000002
rosa_roxburghii	Rroxscaffold_4G00289610 Rroxscaffold_4G00289630
rosa_rugosa	Rorug01G0334300 Rorug01G0334700 Rorug01G0334800
rosa_samantha	Rh1AG341300 Rh1AG341500 Rh1BG302000 Rh1CG318000 Rh1CG318400 Rh1DG334200 Rh1DG334500
rosa_wichuraiana	Rw1G030320 Rw1G030350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	374
AccI	GTMKAC	1 cut(s)	1602
AciI	CCGC	4 cut(s)	135, 193, 619, 1589
AclWI	GGATC	3 cut(s)	116, 364, 1150
AcoI	YGGCCR	2 cut(s)	808, 1750
AcsI	RAATTY	2 cut(s)	1216, 1237
AcuI	CTGAAG	1 cut(s)	1529
AcyI	GRCGYC	1 cut(s)	1489
AfaI	GTAC	4 cut(s)	249, 416, 597, 724
AfiI	CCNNNNNNNGG	3 cut(s)	379, 817, 1165
AflIII	ACRYGT	2 cut(s)	598, 1128
AgeI	ACCGGT	1 cut(s)	637
AjnI	CCWGG	2 cut(s)	1022, 1519
AleI	CACNNNNGTG	1 cut(s)	947
Alw21I	GWGCWC	1 cut(s)	1287
Alw26I	GTCTC	5 cut(s)	66, 203, 863, 1196, 1331
AlwI	GGATC	3 cut(s)	116, 364, 1150
AlwNI	CAGNNNCTG	2 cut(s)	974, 1048
Ama87I	CYCGRG	2 cut(s)	374, 542
AoxI	GGCC	2 cut(s)	808, 1750
ApeKI	GCWGC	2 cut(s)	256, 1560
ApoI	RAATTY	2 cut(s)	1216, 1237
AsiGI	ACCGGT	1 cut(s)	637
Asp700I	GAANNNNTTC	1 cut(s)	1503
AspLEI	GCGC	3 cut(s)	1444, 1565, 1626
AspS9I	GGNCC	1 cut(s)	1523
AsuHPI	GGTGA	3 cut(s)	509, 639, 961
AvaI	CYCGRG	2 cut(s)	374, 542
AvaII	GGWCC	1 cut(s)	1523
BalI	TGGCCA	2 cut(s)	810, 1752
BanII	GRGCYC	1 cut(s)	1173
BarI	GAAGNNNNNNTAC	2 cut(s)	923, 955
BauI	CACGAG	1 cut(s)	873
BbsI	GAAGAC	1 cut(s)	1395
Bbv12I	GWGCWC	1 cut(s)	1287
BbvI	GCAGC	2 cut(s)	268, 1572
BccI	CCATC	6 cut(s)	488, 796, 1217, 1479, 1610, 1777
BcgI	CGANNNNNNTGC	2 cut(s)	1441, 1475
BciT130I	CCWGG	2 cut(s)	1024, 1521
BclI	TGATCA	2 cut(s)	150, 466
BcoDI	GTCTC	5 cut(s)	66, 203, 863, 1196, 1331
BfaI	CTAG	3 cut(s)	474, 488, 1307
BfmI	CTRYAG	2 cut(s)	405, 780
BfoI	RGCGCY	1 cut(s)	1627
BglII	AGATCT	2 cut(s)	877, 1478
BisI	GCNGC	5 cut(s)	136, 194, 257, 1561, 1590
BlpI	GCTNAGC	2 cut(s)	131, 1041
BlsI	GCNGC	5 cut(s)	137, 195, 258, 1562, 1591
Bme1390I	CCNGG	2 cut(s)	1024, 1521
Bme18I	GGWCC	1 cut(s)	1523
BmeT110I	CYCGRG	2 cut(s)	374, 542
BmgT120I	GGNCC	1 cut(s)	1523
BmiI	GGNNCC	2 cut(s)	636, 1170
BmrFI	CCNGG	2 cut(s)	1024, 1521
BmsI	GCATC	4 cut(s)	205, 599, 1054, 1574
BpiI	GAAGAC	1 cut(s)	1395
BplI	GAGNNNNNCTC	2 cut(s)	776, 808
Bpu1102I	GCTNAGC	2 cut(s)	131, 1041
BpuEI	CTTGAG	2 cut(s)	71, 1540
BsaAI	YACGTR	1 cut(s)	599
BsaHI	GRCGYC	1 cut(s)	1489
BsaJI	CCNNGG	1 cut(s)	1078
BsaWI	WCCGGW	1 cut(s)	637
Bsc4I	CCNNNNNNNGG	3 cut(s)	379, 817, 1165
Bse118I	RCCGGY	1 cut(s)	637
Bse1I	ACTGG	1 cut(s)	1355
BseBI	CCWGG	2 cut(s)	1024, 1521
BseDI	CCNNGG	1 cut(s)	1078
BseGI	GGATG	8 cut(s)	81, 153, 451, 757, 794, 923, 1490, 1792
BseLI	CCNNNNNNNGG	3 cut(s)	379, 817, 1165
BseNI	ACTGG	1 cut(s)	1355
BseRI	GAGGAG	4 cut(s)	21, 392, 1184, 1267
BseXI	GCAGC	2 cut(s)	268, 1572
BshFI	GGCC	2 cut(s)	810, 1752
BshTI	ACCGGT	1 cut(s)	637
BsiHKAI	GWGCWC	1 cut(s)	1287
BsiHKCI	CYCGRG	2 cut(s)	374, 542
BsiSI	CCGG	1 cut(s)	638
BslFI	GGGAC	2 cut(s)	326, 1744
BslI	CCNNNNNNNGG	3 cut(s)	379, 817, 1165
BsmAI	GTCTC	5 cut(s)	66, 203, 863, 1196, 1331
BsmBI	CGTCTC	1 cut(s)	1196
BsmFI	GGGAC	2 cut(s)	326, 1744
BsmI	GAATGC	1 cut(s)	1452
BsnI	GGCC	2 cut(s)	810, 1752
BsoBI	CYCGRG	2 cut(s)	374, 542
Bsp1286I	GDGCHC	2 cut(s)	1173, 1287
Bsp143I	GATC	8 cut(s)	121, 150, 369, 466, 691, 877, 1155, 1478
Bsp1720I	GCTNAGC	2 cut(s)	131, 1041
BspACI	CCGC	4 cut(s)	135, 193, 619, 1589
BspANI	GGCC	2 cut(s)	810, 1752
BspLI	GGNNCC	2 cut(s)	636, 1170
BspPI	GGATC	3 cut(s)	116, 364, 1150
BsrFI	RCCGGY	1 cut(s)	637
BsrI	ACTGG	1 cut(s)	1355
BssAI	RCCGGY	1 cut(s)	637
BssECI	CCNNGG	1 cut(s)	1078
BssMI	GATC	8 cut(s)	121, 150, 369, 466, 691, 877, 1155, 1478
BssNI	GRCGYC	1 cut(s)	1489
BssSI	CACGAG	1 cut(s)	873
BssT1I	CCWWGG	1 cut(s)	1078
Bst2BI	CACGAG	1 cut(s)	873
Bst2UI	CCWGG	2 cut(s)	1024, 1521
Bst4CI	ACNGT	6 cut(s)	60, 227, 430, 970, 1183, 1360
Bst6I	CTCTTC	1 cut(s)	1494
BstACI	GRCGYC	1 cut(s)	1489
BstAPI	GCANNNNNTGC	1 cut(s)	483
BstBAI	YACGTR	1 cut(s)	599
BstC8I	GCNNGC	6 cut(s)	254, 284, 623, 627, 1368, 1470
BstENI	CCTNNNNNAGG	1 cut(s)	377
BstF5I	GGATG	8 cut(s)	81, 153, 451, 757, 794, 923, 1490, 1792
BstH2I	RGCGCY	1 cut(s)	1627
BstHHI	GCGC	3 cut(s)	1444, 1565, 1626
BstKTI	GATC	8 cut(s)	124, 153, 372, 469, 694, 880, 1158, 1481
BstMAI	GTCTC	5 cut(s)	66, 203, 863, 1196, 1331
BstMBI	GATC	8 cut(s)	121, 150, 369, 466, 691, 877, 1155, 1478
BstMWI	GCNNNNNNNGC	1 cut(s)	483
BstNI	CCWGG	2 cut(s)	1024, 1521
BstNSI	RCATGY	2 cut(s)	625, 1132
BstSCI	CCNGG	2 cut(s)	1022, 1519
BstSFI	CTRYAG	2 cut(s)	405, 780
BstV1I	GCAGC	2 cut(s)	268, 1572
BstV2I	GAAGAC	1 cut(s)	1395
BstX2I	RGATCY	3 cut(s)	369, 877, 1478
BstXI	CCANNNNNNTGG	1 cut(s)	1274
BstYI	RGATCY	3 cut(s)	369, 877, 1478
BsuRI	GGCC	2 cut(s)	810, 1752
BtgZI	GCGATG	1 cut(s)	1402
BtsCI	GGATG	8 cut(s)	81, 153, 451, 757, 794, 923, 1490, 1792
BtsI	GCAGTG	1 cut(s)	1398
BtsIMutI	CAGTG	5 cut(s)	426, 942, 1392, 1398, 1753
Cac8I	GCNNGC	6 cut(s)	254, 284, 623, 627, 1368, 1470
CaiI	CAGNNNCTG	2 cut(s)	974, 1048
CfoI	GCGC	3 cut(s)	1444, 1565, 1626
Cfr10I	RCCGGY	1 cut(s)	637
Cfr13I	GGNCC	1 cut(s)	1523
CseI	GACGC	1 cut(s)	1478
Csp6I	GTAC	4 cut(s)	248, 415, 596, 723
CspAI	ACCGGT	1 cut(s)	637
CviAII	CATG	8 cut(s)	622, 706, 718, 799, 928, 1093, 1129, 1288
CviQI	GTAC	4 cut(s)	248, 415, 596, 723
DpnI	GATC	8 cut(s)	123, 152, 371, 468, 693, 879, 1157, 1480
DpnII	GATC	8 cut(s)	121, 150, 369, 466, 691, 877, 1155, 1478
DraI	TTTAAA	2 cut(s)	865, 1327
EaeI	YGGCCR	2 cut(s)	808, 1750
Eam1104I	CTCTTC	1 cut(s)	1494
EarI	CTCTTC	1 cut(s)	1494
Eco130I	CCWWGG	1 cut(s)	1078
Eco24I	GRGCYC	1 cut(s)	1173
Eco47I	GGWCC	1 cut(s)	1523
Eco57I	CTGAAG	1 cut(s)	1529
Eco88I	CYCGRG	2 cut(s)	374, 542
EcoNI	CCTNNNNNAGG	1 cut(s)	377
EcoRII	CCWGG	2 cut(s)	1022, 1519
EcoT14I	CCWWGG	1 cut(s)	1078
EcoT38I	GRGCYC	1 cut(s)	1173
ErhI	CCWWGG	1 cut(s)	1078
Esp3I	CGTCTC	1 cut(s)	1196
FaeI	CATG	8 cut(s)	625, 709, 721, 802, 931, 1096, 1132, 1291
FalI	AAGNNNNNCTT	4 cut(s)	95, 127, 825, 857
FaqI	GGGAC	2 cut(s)	326, 1744
FatI	CATG	8 cut(s)	621, 705, 717, 798, 927, 1092, 1128, 1287
FbaI	TGATCA	2 cut(s)	150, 466
FblI	GTMKAC	1 cut(s)	1602
Fnu4HI	GCNGC	5 cut(s)	136, 194, 257, 1561, 1590
FokI	GGATG	7 cut(s)	68, 140, 458, 764, 781, 910, 1497
FriOI	GRGCYC	1 cut(s)	1173
Fsp4HI	GCNGC	5 cut(s)	136, 194, 257, 1561, 1590
FspBI	CTAG	3 cut(s)	474, 488, 1307
GlaI	GCGC	3 cut(s)	1443, 1564, 1625
GluI	GCNGC	5 cut(s)	136, 194, 257, 1561, 1590
HaeII	RGCGCY	1 cut(s)	1627
HaeIII	GGCC	2 cut(s)	810, 1752
HapII	CCGG	1 cut(s)	638
HgaI	GACGC	1 cut(s)	1478
HhaI	GCGC	3 cut(s)	1444, 1565, 1626
Hin1I	GRCGYC	1 cut(s)	1489
Hin1II	CATG	8 cut(s)	625, 709, 721, 802, 931, 1096, 1132, 1291
Hin6I	GCGC	3 cut(s)	1442, 1563, 1624
HinP1I	GCGC	3 cut(s)	1442, 1563, 1624
HincII	GTYRAC	4 cut(s)	402, 643, 732, 790
HindII	GTYRAC	4 cut(s)	402, 643, 732, 790
HinfI	GANTC	5 cut(s)	10, 791, 904, 1504, 1551
HpaI	GTTAAC	2 cut(s)	643, 732
HpaII	CCGG	1 cut(s)	638
HphI	GGTGA	3 cut(s)	509, 639, 961
Hpy188I	TCNGA	9 cut(s)	9, 66, 126, 976, 1050, 1119, 1509, 1534, 1652
Hpy99I	CGWCG	1 cut(s)	351
HpyAV	CCTTC	4 cut(s)	61, 976, 1691, 1697
HpyCH4III	ACNGT	6 cut(s)	60, 227, 430, 970, 1183, 1360
HpyCH4IV	ACGT	2 cut(s)	598, 910
HpyCH4V	TGCA	8 cut(s)	164, 524, 625, 763, 1370, 1403, 1582, 1667
HpyF10VI	GCNNNNNNNGC	1 cut(s)	483
HpySE526I	ACGT	2 cut(s)	598, 910
Hsp92I	GRCGYC	1 cut(s)	1489
Hsp92II	CATG	8 cut(s)	625, 709, 721, 802, 931, 1096, 1132, 1291
HspAI	GCGC	3 cut(s)	1442, 1563, 1624
Ksp22I	TGATCA	2 cut(s)	150, 466
KspAI	GTTAAC	2 cut(s)	643, 732
Kzo9I	GATC	8 cut(s)	121, 150, 369, 466, 691, 877, 1155, 1478
LmnI	GCTCC	3 cut(s)	34, 1168, 1631
Lsp1109I	GCAGC	2 cut(s)	268, 1572
LweI	GCATC	4 cut(s)	205, 599, 1054, 1574
MaeI	CTAG	3 cut(s)	474, 488, 1307
MaeII	ACGT	2 cut(s)	598, 910
MaeIII	GTNAC	7 cut(s)	709, 851, 949, 1177, 1291, 1515, 1657
MalI	GATC	8 cut(s)	123, 152, 371, 468, 693, 879, 1157, 1480
MboI	GATC	8 cut(s)	121, 150, 369, 466, 691, 877, 1155, 1478
MboII	GAAGA	7 cut(s)	379, 838, 1160, 1246, 1400, 1511, 1792
MflI	RGATCY	3 cut(s)	369, 877, 1478
MhlI	GDGCHC	2 cut(s)	1173, 1287
MlsI	TGGCCA	2 cut(s)	810, 1752
MluCI	AATT	7 cut(s)	16, 165, 844, 977, 1104, 1216, 1237
MluNI	TGGCCA	2 cut(s)	810, 1752
MlyI	GAGTC	1 cut(s)	785
MmeI	TCCRAC	1 cut(s)	417
Mox20I	TGGCCA	2 cut(s)	810, 1752
MroXI	GAANNNNTTC	1 cut(s)	1503
MscI	TGGCCA	2 cut(s)	810, 1752
MseI	TTAA	6 cut(s)	642, 731, 843, 864, 1326, 1362
MslI	CAYNNNNRTG	2 cut(s)	947, 1272
Msp20I	TGGCCA	2 cut(s)	810, 1752
MspA1I	CMGCKG	1 cut(s)	135
MspI	CCGG	1 cut(s)	638
MspR9I	CCNGG	2 cut(s)	1024, 1521
Mva1269I	GAATGC	1 cut(s)	1452
MvaI	CCWGG	2 cut(s)	1024, 1521
MwoI	GCNNNNNNNGC	1 cut(s)	483
NdeII	GATC	8 cut(s)	121, 150, 369, 466, 691, 877, 1155, 1478
NlaIII	CATG	8 cut(s)	625, 709, 721, 802, 931, 1096, 1132, 1291
NlaIV	GGNNCC	2 cut(s)	636, 1170
NmuCI	GTSAC	2 cut(s)	851, 949
NspI	RCATGY	2 cut(s)	625, 1132
OliI	CACNNNNGTG	1 cut(s)	947
PaeI	GCATGC	1 cut(s)	625
PaeR7I	CTCGAG	2 cut(s)	374, 542
PciI	ACATGT	1 cut(s)	1128
PctI	GAATGC	1 cut(s)	1452
PdmI	GAANNNNTTC	1 cut(s)	1503
PfeI	GAWTC	4 cut(s)	10, 904, 1504, 1551
PinAI	ACCGGT	1 cut(s)	637
PkrI	GCNGC	5 cut(s)	137, 195, 258, 1562, 1591
PleI	GAGTC	1 cut(s)	785
PpsI	GAGTC	1 cut(s)	785
Ppu21I	YACGTR	1 cut(s)	599
PscI	ACATGT	1 cut(s)	1128
Psp6I	CCWGG	2 cut(s)	1022, 1519
PspGI	CCWGG	2 cut(s)	1022, 1519
PspN4I	GGNNCC	2 cut(s)	636, 1170
PspPI	GGNCC	1 cut(s)	1523
PspXI	VCTCGAGB	2 cut(s)	374, 542
PstNI	CAGNNNCTG	2 cut(s)	974, 1048
PsuI	RGATCY	3 cut(s)	369, 877, 1478
RsaI	GTAC	4 cut(s)	249, 416, 597, 724
RsaNI	GTAC	4 cut(s)	248, 415, 596, 723
RseI	CAYNNNNRTG	2 cut(s)	947, 1272
SaqAI	TTAA	6 cut(s)	642, 731, 843, 864, 1326, 1362
SatI	GCNGC	5 cut(s)	136, 194, 257, 1561, 1590
Sau3AI	GATC	8 cut(s)	121, 150, 369, 466, 691, 877, 1155, 1478
Sau96I	GGNCC	1 cut(s)	1523
SchI	GAGTC	1 cut(s)	785
ScrFI	CCNGG	2 cut(s)	1024, 1521
SduI	GDGCHC	2 cut(s)	1173, 1287
SfaNI	GCATC	4 cut(s)	205, 599, 1054, 1574
SfcI	CTRYAG	2 cut(s)	405, 780
Sfr274I	CTCGAG	2 cut(s)	374, 542
SinI	GGWCC	1 cut(s)	1523
SlaI	CTCGAG	2 cut(s)	374, 542
SmiMI	CAYNNNNRTG	2 cut(s)	947, 1272
SmlI	CTYRAG	4 cut(s)	86, 374, 542, 1555
SmoI	CTYRAG	4 cut(s)	86, 374, 542, 1555
SphI	GCATGC	1 cut(s)	625
Sse9I	AATT	7 cut(s)	16, 165, 844, 977, 1104, 1216, 1237
SsiI	CCGC	4 cut(s)	135, 193, 619, 1589
SspI	AATATT	1 cut(s)	94
SspMI	CTAG	3 cut(s)	474, 488, 1307
StyD4I	CCNGG	2 cut(s)	1022, 1519
StyI	CCWWGG	1 cut(s)	1078
TaaI	ACNGT	6 cut(s)	60, 227, 430, 970, 1183, 1360
TaiI	ACGT	2 cut(s)	601, 913
TaqI	TCGA	6 cut(s)	97, 120, 375, 543, 1549, 1684
TasI	AATT	7 cut(s)	16, 165, 844, 977, 1104, 1216, 1237
TatI	WGTACW	1 cut(s)	722
TauI	GCSGC	3 cut(s)	138, 196, 1592
TfiI	GAWTC	4 cut(s)	10, 904, 1504, 1551
Tru1I	TTAA	6 cut(s)	642, 731, 843, 864, 1326, 1362
Tru9I	TTAA	6 cut(s)	642, 731, 843, 864, 1326, 1362
TscAI	CASTG	5 cut(s)	433, 949, 1399, 1405, 1753
TseFI	GTSAC	2 cut(s)	851, 949
TseI	GCWGC	2 cut(s)	256, 1560
Tsp45I	GTSAC	2 cut(s)	851, 949
TspDTI	ATGAA	4 cut(s)	284, 845, 944, 1636
TspGWI	ACGGA	3 cut(s)	423, 1178, 1778
TspRI	CASTG	5 cut(s)	433, 949, 1399, 1405, 1753
VpaK11BI	GGWCC	1 cut(s)	1523
XagI	CCTNNNNNAGG	1 cut(s)	377
XapI	RAATTY	2 cut(s)	1216, 1237
XbaI	TCTAGA	1 cut(s)	1306
XceI	RCATGY	2 cut(s)	625, 1132
XhoI	CTCGAG	2 cut(s)	374, 542
XmiI	GTMKAC	1 cut(s)	1602
XmnI	GAANNNNTTC	1 cut(s)	1503
XspI	CTAG	3 cut(s)	474, 488, 1307

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.