Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0003916

Physical Location & Seq

Genomic Coordinates Forward (+)

10198318 .. 10204287

Gene Structure 5970 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00289610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGACGACAAAGTTCCTCCTCACCCTTCTCCTCTTCCATCTCTCCACCACGGCCTACTCCATCGGTGTCAACTATGGCACGCTCGGAGACAACCTCCCGCCACCTTCTCAAGTAGCGAATTTCCTCAAGACCCAAACCATCATCGACGCAGTGAAAATCTTCGATATGAACCCGGACATCATCAAAGCCTTCGCCAACTCGGGCATCTCATTGACAGTCACCCTCCCCAACGGGGACATCCCCACCCTCACAAAGCCCCGCGCAGCTCGCCGGTGGCTCCAGCAGAACATCAAGCCCTTCCACCCGGCCACCAGAATACGTTACATCTGTGTCGGCACCGAGGTTCTTCACTGGGGAGATGATGCACAAAAGTCCAACCTAGTCGCGGCCATGAGAACCCTCAACCATGCCCTAAGTGTTGAGGGAATCAAGGACATTAAGATCTCAACGCCACACTCTCTAGGCATCATGCTGGCGTCTGAGCCCCCAAGTCAGGGCCGATTCAGACCGGAGCTGACGCAAATTTTGACACCCATGCTCCGATTCTTGCGAGAAACCAAGTCCCCTCTCATGGTGAATCCGTACCCTTACTTCGGGTGGACCCCGCAAAACGAAAACTATGCACTGTTCAAGCAGTCAGTGGTGGATCCGATCACAAAGCTAACATACAACAGTATGTTCGACGGCTTGATGGACTCCATTTACTCGGCAGCAAAGGTGCTAGGGTTCCCTGATGTCAATATACTTGTGGGAGAGACCGGTTGGCCTTCGGCTTGTGAATTCCCGGTTTGCTCGATGCAACATGCCGCGGATTATAATGGTAACCTGATCAAGCACGTGGAGTCTGGTCAGGGCACACCTTTGATACCGAACCGAAAGTTCGAGACCTACATCTTTGCCTTGTTTAATGAGAACCAAAAACCTGGTCCGCAAGCTGAGAAGAACTGGGGTCTGTTCTACCCTAATTTGACTCCGGTGTACAACGCTGGAGTTATGCGCAATCAACAGGGCGCGGGTGGATCAATACCAACAATGCCGGGTAAACCAGCCACACCAGCCCCAGGCAAACCAAGTAATGGAGGCAAAGTATGGTGCATAGCAAAGCCAGGTGTTACCAACCAGGCCTTGCAGCAAAACTTAGACTACGCGTGCAGCCAGCCGGGTGTGGATTGCGGCCCTATACAACCAGGAGGTGCTTGCTTTTCCAGCGATATCCGGTCCCAGGCATCCTATGCTATGAATGCTTATTATCAGAAAAACGGCCACAATAATTTGAGTTGTGATTTCTCGCAAACCGGACTCGTCACCAGCATCAACCCAAGCGTTAGCGAACAAACTTCGCAAGCAAACATAAACTATGCGTGCGCTCAACAAGGCGTAGATTGTTCGCCAATTCAACCTGGTGGTTCTTGCTTCACCAGCGATCTCATCACTCGGGCCTCCTACGCTATGACCACTTGCTACAATGTCTTCCGTTCACAGGGTGGTACTTGTGATTTCACTCAATCGGCACAACTCACCTCCACTGATCCAAGTAAAGGCTCGTGCAGTTTTGGTCCGAAAGGATCTGGTTCGTCGAATCCACCGGCAGCTGGATCAGGTGCACGTACTACACCTGCTCCAGGAGGAGGCAAAGGCAAAGGCCGAGGCATGAAGTGGTGCGTAGCCAAGCACCAGGCTAGCCAACAAGACTTGCAAGCGAACTTAAACTACGTGTGTGCTAATCAGGGCGTGGACTGCAGCCCGATACAGCCCGGCGGTGCTTGCTATGATTCTGATATCAGGGCACGGGCGTCCTACGCCATGAATTCTTACTATCAGCTTAAGGGTCGTCGCGACTTCAACTGTGATTTCTCTGGAACCGGACTCATCACAATCAGCGACCCAAGCTGGTGGCCATGGACCATCTGGACCAACATGAACCCAACCAAGCACACCTGCTCAACCATCTACCGGAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001871 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016043 GO:0016787 GO:0016798 GO:0022414 GO:0022607 GO:0030198 GO:0030246 GO:0030247 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0044085 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0048229 GO:0048316 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0061458 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17 X8

Protein Analysis

653

Amino Acids

70.84

Weight (kDa)

8.8

Isoelectric Point (pI)

38.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_17	PF00332	21 - 328	1.2e-77	Glycosyl hydrolases family 17
X8	PF07983	364 - 433	1.1e-20	X8 domain
X8	PF07983	438 - 504	8.2e-11	X8 domain
X8	PF07983	552 - 622	5.1e-20	X8 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003916)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55430
fragaria_vesca	FvH4_7g22480 FvH4_7g22494
malus_domestica	MD01G1134200.v1.1 MD07G1198400.v1.1 MD07G1198600.v1.1 MD07G1198700.v1.1
prunus_persica	Prupe.2G235400_v2.0.a1
pyrus_communis	pycom01g15500 pycom07g18550 pycom07g18560 pycom07g18600
rosa_chinensis	RchiOBHm_Chr1g0367091 RchiOBHm_Chr1g0367121
rosa_laevigata	RLG00000027296 RLG00000027300
rosa_multiflora	Rmu_co8239959.1_g000001 Rmu_co8287615.1_g000001 Rmu_sc0007424.1_g000003 Rmu_sc0007844.1_g000002
rosa_roxburghii	Rroxscaffold_4G00289610 Rroxscaffold_4G00289630
rosa_rugosa	Rorug01G0334300 Rorug01G0334700 Rorug01G0334800
rosa_samantha	Rh1AG341300 Rh1AG341500 Rh1BG302000 Rh1CG318000 Rh1CG318400 Rh1DG334200 Rh1DG334500
rosa_wichuraiana	Rw1G030320 Rw1G030350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	816
AarI	CACCTGC	2 cut(s)	1624, 1946
Acc16I	TGCGCA	1 cut(s)	998
Acc36I	ACCTGC	2 cut(s)	1624, 1946
AccB1I	GGYRCC	1 cut(s)	335
AccB7I	CCANNNNNTGG	1 cut(s)	1076
AccII	CGCG	6 cut(s)	261, 386, 809, 1013, 1148, 1836
AclWI	GGATC	6 cut(s)	641, 654, 1027, 1523, 1573, 1603
AcoI	YGGCCR	4 cut(s)	306, 387, 1261, 1895
AcsI	RAATTY	4 cut(s)	118, 522, 779, 1807
AcvI	CACGTG	1 cut(s)	838
AcyI	GRCGYC	2 cut(s)	476, 1793
AdeI	CACNNNGTG	1 cut(s)	1484
AfaI	GTAC	4 cut(s)	584, 980, 1489, 1609
AflII	CTTAAG	1 cut(s)	1823
AflIII	ACRYGT	2 cut(s)	1146, 1713
AgeI	ACCGGT	1 cut(s)	758
AgsI	TTSAA	3 cut(s)	631, 1397, 1843
AjnI	CCWGG	9 cut(s)	922, 1060, 1105, 1119, 1186, 1221, 1399, 1621, 1674
AluBI	AGCT	7 cut(s)	266, 514, 661, 935, 1592, 1822, 1890
AluI	AGCT	7 cut(s)	266, 514, 661, 935, 1592, 1822, 1890
Alw21I	GWGCWC	1 cut(s)	1606
Alw26I	GTCTC	3 cut(s)	81, 749, 878
Alw44I	GTGCAC	1 cut(s)	1602
AlwI	GGATC	6 cut(s)	641, 654, 1027, 1523, 1573, 1603
Ama87I	CYCGRG	2 cut(s)	199, 1434
ApaLI	GTGCAC	1 cut(s)	1602
ApeKI	GCWGC	6 cut(s)	263, 710, 1129, 1152, 1589, 1740
ApoI	RAATTY	4 cut(s)	118, 522, 779, 1807
ArsI	GACNNNNNNTTYG	4 cut(s)	508, 540, 910, 942
AsiGI	ACCGGT	1 cut(s)	758
Asp700I	GAANNNNTTC	1 cut(s)	158
AspLEI	GCGC	4 cut(s)	263, 999, 1013, 1367
AspS9I	GGNCC	9 cut(s)	496, 600, 926, 1175, 1218, 1437, 1556, 1902, 1911
AsuC2I	CCSGG	6 cut(s)	173, 305, 785, 1038, 1161, 1755
AsuHPI	GGTGA	6 cut(s)	13, 211, 586, 1297, 1408, 1510
AsuNHI	GCTAGC	1 cut(s)	1679
AvaI	CYCGRG	2 cut(s)	199, 1434
AvaII	GGWCC	6 cut(s)	600, 926, 1218, 1556, 1902, 1911
BaeGI	GKGCMC	3 cut(s)	857, 1606, 1789
BalI	TGGCCA	1 cut(s)	1897
BamHI	GGATCC	1 cut(s)	646
BanI	GGYRCC	1 cut(s)	335
BanII	GRGCYC	1 cut(s)	486
BarI	GAAGNNNNNNTAC	2 cut(s)	575, 607
BauI	CACGAG	1 cut(s)	1543
BbrPI	CACGTG	1 cut(s)	838
BbsI	GAAGAC	1 cut(s)	1462
Bbv12I	GWGCWC	1 cut(s)	1606
BbvI	GCAGC	6 cut(s)	275, 722, 1141, 1164, 1601, 1752
BccI	CCATC	6 cut(s)	45, 68, 146, 685, 1913, 1955
BceAI	ACGGC	3 cut(s)	66, 700, 1276
BcgI	CGANNNNNNTGC	2 cut(s)	602, 636
BciT130I	CCWGG	9 cut(s)	924, 1062, 1107, 1121, 1188, 1223, 1401, 1623, 1676
BclI	TGATCA	1 cut(s)	828
BcnI	CCSGG	6 cut(s)	173, 305, 785, 1038, 1161, 1755
BcoDI	GTCTC	3 cut(s)	81, 749, 878
BfaI	CTAG	4 cut(s)	380, 461, 722, 1680
BfmI	CTRYAG	1 cut(s)	1738
BfrI	CTTAAG	1 cut(s)	1823
BfuAI	ACCTGC	2 cut(s)	1624, 1946
BglII	AGATCT	1 cut(s)	441
BisI	GCNGC	9 cut(s)	264, 387, 711, 807, 1130, 1153, 1174, 1590, 1741
BlsI	GCNGC	9 cut(s)	265, 388, 712, 808, 1131, 1154, 1175, 1591, 1742
Bme18I	GGWCC	6 cut(s)	600, 926, 1218, 1556, 1902, 1911
BmeT110I	CYCGRG	2 cut(s)	199, 1434
BmgT120I	GGNCC	9 cut(s)	496, 600, 926, 1175, 1218, 1437, 1556, 1902, 1911
BmiI	GGNNCC	7 cut(s)	278, 337, 602, 648, 728, 1220, 1861
BmrI	ACTGGG	2 cut(s)	361, 955
BmsI	GCATC	6 cut(s)	213, 352, 474, 786, 1235, 1320
BmtI	GCTAGC	1 cut(s)	1683
BmuI	ACTGGG	2 cut(s)	361, 955
BpiI	GAAGAC	1 cut(s)	1462
BplI	GAGNNNNNCTC	2 cut(s)	78, 110
BpmI	CTGGAG	3 cut(s)	263, 1008, 1605
BpuEI	CTTGAG	2 cut(s)	93, 110
BpuMI	CCSGG	6 cut(s)	173, 305, 785, 1038, 1161, 1755
BsaAI	YACGTR	3 cut(s)	838, 1607, 1714
BsaHI	GRCGYC	2 cut(s)	476, 1793
BsaI	GGTCTC	2 cut(s)	749, 878
BsaJI	CCNNGG	7 cut(s)	48, 339, 807, 1060, 1221, 1645, 1898
BsaWI	WCCGGW	7 cut(s)	508, 758, 973, 1215, 1295, 1862, 1953
BsaXI	ACNNNNNCTCC	6 cut(s)	522, 552, 1071, 1101, 1603, 1633
Bse118I	RCCGGY	3 cut(s)	270, 758, 1585
Bse1I	ACTGG	2 cut(s)	356, 950
BseBI	CCWGG	9 cut(s)	924, 1062, 1107, 1121, 1188, 1223, 1401, 1623, 1676
BseDI	CCNNGG	7 cut(s)	48, 339, 807, 1060, 1221, 1645, 1898
BseGI	GGATG	2 cut(s)	237, 1226
BseMII	CTCAG	2 cut(s)	471, 927
BseNI	ACTGG	2 cut(s)	356, 950
BseRI	GAGGAG	3 cut(s)	8, 20, 1641
BseSI	GKGCMC	3 cut(s)	857, 1606, 1789
BseXI	GCAGC	6 cut(s)	275, 722, 1141, 1164, 1601, 1752
BsgI	GTGCAG	2 cut(s)	1171, 1567
Bsh1236I	CGCG	6 cut(s)	261, 386, 809, 1013, 1148, 1836
BshNI	GGYRCC	1 cut(s)	335
BshTI	ACCGGT	1 cut(s)	758
BsiHKAI	GWGCWC	1 cut(s)	1606
BsiHKCI	CYCGRG	2 cut(s)	199, 1434
BslFI	GGGAC	3 cut(s)	248, 547, 1204
BsmAI	GTCTC	3 cut(s)	81, 749, 878
BsmFI	GGGAC	3 cut(s)	248, 547, 1204
BsmI	GAATGC	1 cut(s)	1246
Bso31I	GGTCTC	2 cut(s)	749, 878
BsoBI	CYCGRG	2 cut(s)	199, 1434
Bsp1286I	GDGCHC	4 cut(s)	486, 857, 1606, 1789
Bsp1407I	TGTACA	1 cut(s)	978
Bsp143I	GATC	9 cut(s)	441, 646, 651, 828, 1019, 1423, 1528, 1565, 1595
Bsp19I	CCATGG	1 cut(s)	1898
Bsp68I	TCGCGA	1 cut(s)	1836
BspCNI	CTCAG	2 cut(s)	472, 928
BspFNI	CGCG	6 cut(s)	261, 386, 809, 1013, 1148, 1836
BspLI	GGNNCC	7 cut(s)	278, 337, 602, 648, 728, 1220, 1861
BspMAI	CTGCAG	1 cut(s)	1742
BspMI	ACCTGC	2 cut(s)	1624, 1946
BspOI	GCTAGC	1 cut(s)	1683
BspPI	GGATC	6 cut(s)	641, 654, 1027, 1523, 1573, 1603
BspT107I	GGYRCC	1 cut(s)	335
BspTI	CTTAAG	1 cut(s)	1823
BspTNI	GGTCTC	2 cut(s)	749, 878
BsrFI	RCCGGY	3 cut(s)	270, 758, 1585
BsrGI	TGTACA	1 cut(s)	978
BsrI	ACTGG	2 cut(s)	356, 950
BssAI	RCCGGY	3 cut(s)	270, 758, 1585
BssECI	CCNNGG	7 cut(s)	48, 339, 807, 1060, 1221, 1645, 1898
BssMI	GATC	9 cut(s)	441, 646, 651, 828, 1019, 1423, 1528, 1565, 1595
BssNI	GRCGYC	2 cut(s)	476, 1793
BssSI	CACGAG	1 cut(s)	1543
BssT1I	CCWWGG	1 cut(s)	1898
Bst2BI	CACGAG	1 cut(s)	1543
Bst2UI	CCWGG	9 cut(s)	924, 1062, 1107, 1121, 1188, 1223, 1401, 1623, 1676
Bst4CI	ACNGT	4 cut(s)	217, 627, 674, 1847
Bst6I	CTCTTC	1 cut(s)	38
BstACI	GRCGYC	2 cut(s)	476, 1793
BstAFI	CTTAAG	1 cut(s)	1823
BstAPI	GCANNNNNTGC	1 cut(s)	1232
BstAUI	TGTACA	1 cut(s)	978
BstBAI	YACGTR	3 cut(s)	838, 1607, 1714
BstDEI	CTNAG	4 cut(s)	413, 480, 936, 1138
BstDSI	CCRYGG	3 cut(s)	48, 807, 1898
BstEII	GGTNACC	1 cut(s)	821
BstENI	CCTNNNNNAGG	1 cut(s)	1620
BstF5I	GGATG	2 cut(s)	237, 1226
BstFNI	CGCG	6 cut(s)	261, 386, 809, 1013, 1148, 1836
BstHHI	GCGC	4 cut(s)	263, 999, 1013, 1367
BstKTI	GATC	9 cut(s)	444, 649, 654, 831, 1022, 1426, 1531, 1568, 1598
BstMAI	GTCTC	3 cut(s)	81, 749, 878
BstMBI	GATC	9 cut(s)	441, 646, 651, 828, 1019, 1423, 1528, 1565, 1595
BstNI	CCWGG	9 cut(s)	924, 1062, 1107, 1121, 1188, 1223, 1401, 1623, 1676
BstNSI	RCATGY	1 cut(s)	806
BstPI	GGTNACC	1 cut(s)	821
BstSFI	CTRYAG	1 cut(s)	1738
BstSLI	GKGCMC	3 cut(s)	857, 1606, 1789
BstUI	CGCG	6 cut(s)	261, 386, 809, 1013, 1148, 1836
BstV1I	GCAGC	6 cut(s)	275, 722, 1141, 1164, 1601, 1752
BstV2I	GAAGAC	1 cut(s)	1462
BstX2I	RGATCY	3 cut(s)	441, 646, 1565
BstXI	CCANNNNNNTGG	2 cut(s)	923, 1893
BstYI	RGATCY	3 cut(s)	441, 646, 1565
BtgI	CCRYGG	3 cut(s)	48, 807, 1898
BtsCI	GGATG	2 cut(s)	237, 1226
BtsI	GCAGTG	1 cut(s)	156
BtsIMutI	CAGTG	5 cut(s)	156, 349, 623, 645, 1524
BtuMI	TCGCGA	1 cut(s)	1836
BveI	ACCTGC	2 cut(s)	1624, 1946
CfoI	GCGC	4 cut(s)	263, 999, 1013, 1367
Cfr10I	RCCGGY	3 cut(s)	270, 758, 1585
Cfr13I	GGNCC	9 cut(s)	496, 600, 926, 1175, 1218, 1437, 1556, 1902, 1911
Cfr42I	CCGCGG	1 cut(s)	810
CseI	GACGC	4 cut(s)	155, 465, 526, 1782
CsiI	ACCWGGT	2 cut(s)	922, 1399
Csp6I	GTAC	4 cut(s)	583, 979, 1488, 1608
CspAI	ACCGGT	1 cut(s)	758
CviQI	GTAC	4 cut(s)	583, 979, 1488, 1608
DdeI	CTNAG	4 cut(s)	413, 480, 936, 1138
DpnI	GATC	9 cut(s)	443, 648, 653, 830, 1021, 1425, 1530, 1567, 1597
DpnII	GATC	9 cut(s)	441, 646, 651, 828, 1019, 1423, 1528, 1565, 1595
DraIII	CACNNNGTG	1 cut(s)	1484
EaeI	YGGCCR	4 cut(s)	306, 387, 1261, 1895
Eam1104I	CTCTTC	1 cut(s)	38
EarI	CTCTTC	1 cut(s)	38
Eco130I	CCWWGG	1 cut(s)	1898
Eco147I	AGGCCT	1 cut(s)	1124
Eco24I	GRGCYC	1 cut(s)	486
Eco31I	GGTCTC	2 cut(s)	749, 878
Eco32I	GATATC	2 cut(s)	1213, 1780
Eco47I	GGWCC	6 cut(s)	600, 926, 1218, 1556, 1902, 1911
Eco72I	CACGTG	1 cut(s)	838
Eco88I	CYCGRG	2 cut(s)	199, 1434
Eco91I	GGTNACC	1 cut(s)	821
EcoNI	CCTNNNNNAGG	1 cut(s)	1620
EcoO65I	GGTNACC	1 cut(s)	821
EcoRI	GAATTC	2 cut(s)	779, 1807
EcoRII	CCWGG	9 cut(s)	922, 1060, 1105, 1119, 1186, 1221, 1399, 1621, 1674
EcoRV	GATATC	2 cut(s)	1213, 1780
EcoT14I	CCWWGG	1 cut(s)	1898
EcoT38I	GRGCYC	1 cut(s)	486
ErhI	CCWWGG	1 cut(s)	1898
FaqI	GGGAC	3 cut(s)	248, 547, 1204
FauI	CCCGC	4 cut(s)	105, 266, 612, 1006
FbaI	TGATCA	1 cut(s)	828
Fnu4HI	GCNGC	9 cut(s)	264, 387, 711, 807, 1130, 1153, 1174, 1590, 1741
FokI	GGATG	2 cut(s)	224, 1213
FriOI	GRGCYC	1 cut(s)	486
Fsp4HI	GCNGC	9 cut(s)	264, 387, 711, 807, 1130, 1153, 1174, 1590, 1741
FspBI	CTAG	4 cut(s)	380, 461, 722, 1680
FspI	TGCGCA	1 cut(s)	998
GlaI	GCGC	4 cut(s)	262, 998, 1012, 1366
GluI	GCNGC	9 cut(s)	264, 387, 711, 807, 1130, 1153, 1174, 1590, 1741
GsuI	CTGGAG	3 cut(s)	263, 1008, 1605
HgaI	GACGC	4 cut(s)	155, 465, 526, 1782
HhaI	GCGC	4 cut(s)	263, 999, 1013, 1367
Hin1I	GRCGYC	2 cut(s)	476, 1793
Hin6I	GCGC	4 cut(s)	261, 997, 1011, 1365
HinP1I	GCGC	4 cut(s)	261, 997, 1011, 1365
HincII	GTYRAC	1 cut(s)	70
HindII	GTYRAC	1 cut(s)	70
HphI	GGTGA	6 cut(s)	13, 211, 586, 1297, 1408, 1510
Hpy166II	GTNNAC	7 cut(s)	70, 600, 979, 1043, 1478, 1604, 1735
Hpy188I	TCNGA	8 cut(s)	86, 481, 506, 542, 651, 1254, 1560, 1777
Hpy188III	TCNNGA	5 cut(s)	127, 883, 1835, 1857, 1909
Hpy8I	GTNNAC	7 cut(s)	70, 600, 979, 1043, 1478, 1604, 1735
Hpy99I	CGWCG	4 cut(s)	149, 686, 1579, 1836
HpyAV	CCTTC	5 cut(s)	35, 114, 199, 307, 777
HpyCH4III	ACNGT	4 cut(s)	217, 627, 674, 1847
HpyCH4IV	ACGT	4 cut(s)	319, 837, 1606, 1713
HpyF3I	CTNAG	4 cut(s)	413, 480, 936, 1138
HpySE526I	ACGT	4 cut(s)	319, 837, 1606, 1713
Hsp92I	GRCGYC	2 cut(s)	476, 1793
HspAI	GCGC	4 cut(s)	261, 997, 1011, 1365
Ksp22I	TGATCA	1 cut(s)	828
KspI	CCGCGG	1 cut(s)	810
Kzo9I	GATC	9 cut(s)	441, 646, 651, 828, 1019, 1423, 1528, 1565, 1595
LmnI	GCTCC	4 cut(s)	282, 511, 543, 1624
Lsp1109I	GCAGC	6 cut(s)	275, 722, 1141, 1164, 1601, 1752
LweI	GCATC	6 cut(s)	213, 352, 474, 786, 1235, 1320
MabI	ACCWGGT	2 cut(s)	922, 1399
MaeI	CTAG	4 cut(s)	380, 461, 722, 1680
MaeII	ACGT	4 cut(s)	319, 837, 1606, 1713
MaeIII	GTNAC	5 cut(s)	217, 320, 821, 1111, 1303
MalI	GATC	9 cut(s)	443, 648, 653, 830, 1021, 1425, 1530, 1567, 1597
MboI	GATC	9 cut(s)	441, 646, 651, 828, 1019, 1423, 1528, 1565, 1595
MboII	GAAGA	5 cut(s)	25, 151, 338, 952, 1462
MflI	RGATCY	3 cut(s)	441, 646, 1565
MhlI	GDGCHC	4 cut(s)	486, 857, 1606, 1789
MlsI	TGGCCA	1 cut(s)	1897
MluCI	AATT	7 cut(s)	118, 522, 779, 964, 1270, 1392, 1807
MluI	ACGCGT	1 cut(s)	1146
MluNI	TGGCCA	1 cut(s)	1897
MlyI	GAGTC	5 cut(s)	689, 851, 964, 1293, 1860
MmeI	TCCRAC	1 cut(s)	399
Mox20I	TGGCCA	1 cut(s)	1897
MroXI	GAANNNNTTC	1 cut(s)	158
MscI	TGGCCA	1 cut(s)	1897
MseI	TTAA	4 cut(s)	438, 906, 1706, 1824
Msp20I	TGGCCA	1 cut(s)	1897
MspA1I	CMGCKG	2 cut(s)	809, 1592
MspCI	CTTAAG	1 cut(s)	1823
Mva1269I	GAATGC	1 cut(s)	1246
MvaI	CCWGG	9 cut(s)	924, 1062, 1107, 1121, 1188, 1223, 1401, 1623, 1676
MvnI	CGCG	6 cut(s)	261, 386, 809, 1013, 1148, 1836
NciI	CCSGG	6 cut(s)	173, 305, 785, 1038, 1161, 1755
NcoI	CCATGG	1 cut(s)	1898
NdeII	GATC	9 cut(s)	441, 646, 651, 828, 1019, 1423, 1528, 1565, 1595
NheI	GCTAGC	1 cut(s)	1679
NlaIV	GGNNCC	7 cut(s)	278, 337, 602, 648, 728, 1220, 1861
NmeAIII	GCCGAG	2 cut(s)	686, 1670
NmuCI	GTSAC	2 cut(s)	217, 1303
NruI	TCGCGA	1 cut(s)	1836
NsbI	TGCGCA	1 cut(s)	998
NspI	RCATGY	1 cut(s)	806
PaqCI	CACCTGC	2 cut(s)	1624, 1946
PceI	AGGCCT	1 cut(s)	1124
PctI	GAATGC	1 cut(s)	1246
PdmI	GAANNNNTTC	1 cut(s)	158
PfeI	GAWTC	6 cut(s)	426, 501, 543, 577, 1579, 1772
PflMI	CCANNNNNTGG	1 cut(s)	1076
PfoI	TCCNGGA	1 cut(s)	1621
PinAI	ACCGGT	1 cut(s)	758
PkrI	GCNGC	9 cut(s)	265, 388, 712, 808, 1131, 1154, 1175, 1591, 1742
PleI	GAGTC	5 cut(s)	689, 850, 964, 1293, 1860
PmaCI	CACGTG	1 cut(s)	838
PmlI	CACGTG	1 cut(s)	838
PpsI	GAGTC	5 cut(s)	689, 850, 964, 1293, 1860
Ppu21I	YACGTR	3 cut(s)	838, 1607, 1714
PsiI	TTATAA	1 cut(s)	816
Psp6I	CCWGG	9 cut(s)	922, 1060, 1105, 1119, 1186, 1221, 1399, 1621, 1674
PspCI	CACGTG	1 cut(s)	838
PspEI	GGTNACC	1 cut(s)	821
PspGI	CCWGG	9 cut(s)	922, 1060, 1105, 1119, 1186, 1221, 1399, 1621, 1674
PspN4I	GGNNCC	7 cut(s)	278, 337, 602, 648, 728, 1220, 1861
PspPI	GGNCC	9 cut(s)	496, 600, 926, 1175, 1218, 1437, 1556, 1902, 1911
PsrI	GAACNNNNNNTAC	2 cut(s)	1694, 1726
PstI	CTGCAG	1 cut(s)	1742
PsuI	RGATCY	3 cut(s)	441, 646, 1565
PvuII	CAGCTG	1 cut(s)	1592
RruI	TCGCGA	1 cut(s)	1836
RsaI	GTAC	4 cut(s)	584, 980, 1489, 1609
RsaNI	GTAC	4 cut(s)	583, 979, 1488, 1608
SacII	CCGCGG	1 cut(s)	810
SaqAI	TTAA	4 cut(s)	438, 906, 1706, 1824
SatI	GCNGC	9 cut(s)	264, 387, 711, 807, 1130, 1153, 1174, 1590, 1741
Sau3AI	GATC	9 cut(s)	441, 646, 651, 828, 1019, 1423, 1528, 1565, 1595
Sau96I	GGNCC	9 cut(s)	496, 600, 926, 1175, 1218, 1437, 1556, 1902, 1911
SchI	GAGTC	5 cut(s)	689, 851, 964, 1293, 1860
SduI	GDGCHC	4 cut(s)	486, 857, 1606, 1789
SexAI	ACCWGGT	2 cut(s)	922, 1399
SfaNI	GCATC	6 cut(s)	213, 352, 474, 786, 1235, 1320
SfcI	CTRYAG	1 cut(s)	1738
Sfr303I	CCGCGG	1 cut(s)	810
SgrAI	CRCCGGYG	1 cut(s)	270
SgrBI	CCGCGG	1 cut(s)	810
SinI	GGWCC	6 cut(s)	600, 926, 1218, 1556, 1902, 1911
SmlI	CTYRAG	3 cut(s)	108, 125, 1823
SmoI	CTYRAG	3 cut(s)	108, 125, 1823
Sse9I	AATT	7 cut(s)	118, 522, 779, 964, 1270, 1392, 1807
SseBI	AGGCCT	1 cut(s)	1124
SspMI	CTAG	4 cut(s)	380, 461, 722, 1680
StuI	AGGCCT	1 cut(s)	1124
StyI	CCWWGG	1 cut(s)	1898
TaaI	ACNGT	4 cut(s)	217, 627, 674, 1847
TaiI	ACGT	4 cut(s)	322, 840, 1609, 1716
TaqI	TCGA	6 cut(s)	144, 162, 681, 794, 882, 1577
TasI	AATT	7 cut(s)	118, 522, 779, 964, 1270, 1392, 1807
TatI	WGTACW	1 cut(s)	978
TauI	GCSGC	3 cut(s)	389, 809, 1176
TfiI	GAWTC	6 cut(s)	426, 501, 543, 577, 1579, 1772
Tru1I	TTAA	4 cut(s)	438, 906, 1706, 1824
Tru9I	TTAA	4 cut(s)	438, 906, 1706, 1824
TscAI	CASTG	5 cut(s)	156, 356, 630, 645, 1531
TseFI	GTSAC	2 cut(s)	217, 1303
TseI	GCWGC	6 cut(s)	263, 710, 1129, 1152, 1589, 1740
Tsp45I	GTSAC	2 cut(s)	217, 1303
TspDTI	ATGAA	5 cut(s)	182, 1253, 1667, 1820, 1934
TspGWI	ACGGA	2 cut(s)	570, 1463
TspRI	CASTG	5 cut(s)	156, 356, 630, 645, 1531
Van91I	CCANNNNNTGG	1 cut(s)	1076
Vha464I	CTTAAG	1 cut(s)	1823
VneI	GTGCAC	1 cut(s)	1602
VpaK11BI	GGWCC	6 cut(s)	600, 926, 1218, 1556, 1902, 1911
XagI	CCTNNNNNAGG	1 cut(s)	1620
XapI	RAATTY	4 cut(s)	118, 522, 779, 1807
XceI	RCATGY	1 cut(s)	806
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1905
XmnI	GAANNNNTTC	1 cut(s)	158
XspI	CTAG	4 cut(s)	380, 461, 722, 1680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.