MD01G1148800.v1.1

Nematode resistance protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0013472
Physical Location & Seq
Reverse (-)
25746728 .. 25748179
1452 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1148800.v1.1.491

Sequence Viewer

Length: 1452 bp
ATGGTAGATTTAGATTGGAAAGCAAAGATGGTCTCCTCCAACATACCCAGCAAATCCTCCAAACTCTCCACCAAGCTCCACGTCTCGGTTCCCGGTTCGTTTCGCTCCGCCGCCCAAGTTCAGACCGATATTTCCGCCGCCTCCGAAATGTCCTGCTCCACCTACGAGCACTACCTCCGCCTCCCGGAGCTCCGAGAGTTCTGGAGCTCCCACGACTTTCCATCGTGGAAAAACGAGTCGATTCTCAAGCCGGCTCTCCAAGCTCTCGAAATCTCGTTCCGGTTCGTCTCGACCGTTTTGTCCGACCCTAGACCGTACTCAAACCGGCGCGAGTGGAAGCGCCGGCTTGAGTCGCTCTCTACCAGCCAGATACAGCTCATCGCGATGTTGATCGAGGACGACGAGGAAGACAGCGAGACGCGCGGATTGGCGCCGATCGTCGATCTCAGCACGTCGAACGGGGAGCTGGCCCGCGACGGGAGCATGGCGGAGGTGTGGAGTTCGGGGGAGCACACGGTGGTCAGCCGCACCAGCGAGGTCAGCTTGCTACCTCGGCTCGCCACGTGGCAGAAATCGGAAGGGATGGCGCAGAAGATACTGTACTCGATCGAGTGCGAGATGAGTAACTGTCCGTACTCGTTGGGCCTGGGGGAGCCGAACCTCGCCGGGAAGCCGAACCTGGATTACGACGCCGTATGCAAGCCGAGCGAGCTGCATTCCCTGAGGAAGAGCCCGTACGACGCCCATGTCGACAACTACGAGAACCAGACGGTGTACGCCACGCACCAGGTCCTCGAGTCGTGGGTCCACGTTTGCCGGGAGCTTCTCATGCGCGTGGTAAGCCGCATCGAATCTCGAGACTTGGAAAAGGCCGCGAGCGACTGTTACGTGATCGAACGGATATGGAAGCTCCTCGCGGAGATGGAGGATCTTCACCTTCTGATGGACCCGGCCGATTTTCTGAGGCTGAAGAACCAGCTGCGGATCAAGACAGTGGACGATACGGAGTCGTTTTGCTTCAGATCGAAGGCGCTCGTGGAGGTGACGAAGCTCTGCAAGGAGCTGAGGCATAAGGTGCCGTACATACTGGGTGTTGAGGTGGACCCCAAGGGAGGGCCCAGGATTCAGGAGGCGGCGATGAGGCTGTACTCGGAGAAGAAAGCCGAGTCAGACTCGGAATCCGTCTCGGAGAAGATCCACTTGCTGCAGGCGCTTCAGGCGATTGAGTCGGCTTTGAAGCGATTCTACTACGCGTACAAGCAGGTGCTGGTGGTGTTGATGGGGAGCTTGGAGGCGAAGGGGAACCAAGTCGTGGTGAGTCCGGAGGCGTGTGACTCGCTGAGTCGGATATTTCTGGAGCCGACTTATTTTCCGAGCTTGGACGCGGCGAAGACGTTTTTGGGGGATAGTTTGAATCACGGGTTACACGGCGGAGACAGGCGGAAACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Hs1pro-1_C Hs1pro-1_N

Protein Analysis

484

Amino Acids

54.65

Weight (kDa)

5.8

Isoelectric Point (pI)

53.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hs1pro-1_N PF07231 1 - 204 1.2e-83 Hs1pro-1 N-terminus
Hs1pro-1_C PF07014 207 - 470 1.2e-130 Hs1pro-1 protein C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G40000
fragaria_vesca FvH4_7g24150
malus_domestica MD01G1148800.v1.1 MD07G1215700.v1.1
prunus_persica Prupe.2G247600_v2.0.a1
pyrus_communis pycom01g16720 pycom07g19800
rosa_chinensis RchiOBHm_Chr1g0369681
rosa_laevigata RLG00000027112
rosa_multiflora Rmu_sc0001154.1_g000025
rosa_roxburghii Rroxscaffold_2G00131660 Rroxscaffold_4G00287440
rosa_rugosa Rorug01G0351800
rosa_samantha Rh1AG359900 Rh1BG323800 Rh1CG337000 Rh1DG354400
rosa_wichuraiana Rw1G031710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1252
AasI GACNNNNNNGTC 2 cut(s) 298, 746
Acc36I ACCTGC 1 cut(s) 1252
AccB1I GGYRCC 2 cut(s) 430, 1075
AccB7I CCANNNNNTGG 1 cut(s) 1312
AccI GTMKAC 1 cut(s) 750
AccIII TCCGGA 1 cut(s) 1321
AclWI GGATC 3 cut(s) 936, 992, 1189
AcoI YGGCCR 1 cut(s) 951
AcuI CTGAAG 3 cut(s) 989, 1003, 1199
AcvI CACGTG 1 cut(s) 564
AcyI GRCGYC 3 cut(s) 431, 690, 741
AdeI CACNNNGTG 1 cut(s) 517
AfaI GTAC 8 cut(s) 317, 602, 635, 737, 776, 1082, 1148, 1256
AfiI CCNNNNNNNGG 7 cut(s) 85, 184, 477, 943, 1112, 1113, 1312
AflIII ACRYGT 1 cut(s) 1251
AgsI TTSAA 2 cut(s) 1237, 1414
AjiI CACGTC 2 cut(s) 82, 453
AjnI CCWGG 4 cut(s) 645, 678, 786, 1118
AjuI GAANNNNNNNTTGG 2 cut(s) 1382, 1414
Alw21I GWGCWC 4 cut(s) 171, 192, 209, 513
Alw26I GTCTC 7 cut(s) 37, 88, 292, 410, 852, 1189, 1428
AlwI GGATC 3 cut(s) 936, 992, 1189
AlwNI CAGNNNCTG 1 cut(s) 1267
Ama87I CYCGRG 2 cut(s) 794, 855
Aor13HI TCCGGA 1 cut(s) 1321
AoxI GGCC 5 cut(s) 468, 643, 870, 951, 1115
ApaI GGGCCC 1 cut(s) 1119
ApeKI GCWGC 3 cut(s) 712, 979, 1204
Asp700I GAANNNNTTC 1 cut(s) 1241
AspLEI GCGC 8 cut(s) 330, 342, 423, 433, 589, 834, 1033, 1213
AspS9I GGNCC 8 cut(s) 469, 643, 790, 805, 946, 1102, 1115, 1116
AsuC2I CCSGG 5 cut(s) 93, 185, 667, 818, 950
AsuHPI GGTGA 3 cut(s) 926, 1054, 1327
AvaI CYCGRG 2 cut(s) 794, 855
AvaII GGWCC 4 cut(s) 790, 805, 946, 1102
AxyI CCTNAGG 1 cut(s) 722
BaeGI GKGCMC 1 cut(s) 1119
BanI GGYRCC 2 cut(s) 430, 1075
BanII GRGCYC 4 cut(s) 192, 209, 734, 1119
BarI GAAGNNNNNNTAC 6 cut(s) 584, 616, 719, 751, 1229, 1261
BauI CACGAG 1 cut(s) 1034
BbrPI CACGTG 1 cut(s) 564
BbsI GAAGAC 2 cut(s) 414, 1397
Bbv12I GWGCWC 4 cut(s) 171, 192, 209, 513
BbvCI CCTCAGC 1 cut(s) 1064
BbvI GCAGC 3 cut(s) 699, 966, 1191
BccI CCATC 6 cut(s) 22, 229, 577, 916, 937, 1273
BceAI ACGGC 3 cut(s) 677, 1063, 1444
BcgI CGANNNNNNTGC 2 cut(s) 694, 728
BciT130I CCWGG 4 cut(s) 647, 680, 788, 1120
BcnI CCSGG 5 cut(s) 93, 185, 667, 818, 950
BcoDI GTCTC 7 cut(s) 37, 88, 292, 410, 852, 1189, 1428
BfaI CTAG 1 cut(s) 309
BfmI CTRYAG 1 cut(s) 1205
BfoI RGCGCY 4 cut(s) 343, 434, 1034, 1214
BfuAI ACCTGC 1 cut(s) 1252
Bme1390I CCNGG 9 cut(s) 93, 185, 647, 667, 680, 788, 818, 950, 1120
Bme18I GGWCC 4 cut(s) 790, 805, 946, 1102
BmeT110I CYCGRG 2 cut(s) 794, 855
BmgBI CACGTC 2 cut(s) 82, 453
BmgT120I GGNCC 8 cut(s) 469, 643, 790, 805, 946, 1102, 1115, 1116
BmrFI CCNGG 9 cut(s) 93, 185, 647, 667, 680, 788, 818, 950, 1120
BmrI ACTGGG 1 cut(s) 1097
BmsI GCATC 1 cut(s) 855
BmuI ACTGGG 1 cut(s) 1097
BpiI GAAGAC 2 cut(s) 414, 1397
BplI GAGNNNNNCTC 4 cut(s) 341, 373, 1157, 1189
BpmI CTGGAG 2 cut(s) 223, 1376
Bpu10I CCTNAGC 1 cut(s) 1064
BpuEI CTTGAG 2 cut(s) 230, 368
BpuMI CCSGG 5 cut(s) 93, 185, 667, 818, 950
BsaAI YACGTR 2 cut(s) 564, 889
BsaBI GATNNNNATC 1 cut(s) 389
BsaHI GRCGYC 3 cut(s) 431, 690, 741
BsaI GGTCTC 1 cut(s) 37
BsaJI CCNNGG 4 cut(s) 551, 646, 1107, 1118
BsaWI WCCGGW 2 cut(s) 279, 1321
Bsc4I CCNNNNNNNGG 7 cut(s) 85, 184, 477, 943, 1112, 1113, 1312
Bse118I RCCGGY 3 cut(s) 250, 324, 342
Bse1I ACTGG 1 cut(s) 1092
Bse21I CCTNAGG 1 cut(s) 722
Bse8I GATNNNNATC 1 cut(s) 389
BseAI TCCGGA 1 cut(s) 1321
BseBI CCWGG 4 cut(s) 647, 680, 788, 1120
BseDI CCNNGG 4 cut(s) 551, 646, 1107, 1118
BseGI GGATG 1 cut(s) 588
BseJI GATNNNNATC 1 cut(s) 389
BseLI CCNNNNNNNGG 7 cut(s) 85, 184, 477, 943, 1112, 1113, 1312
BseMII CTCAG 5 cut(s) 460, 713, 953, 1055, 1331
BseNI ACTGG 1 cut(s) 1092
BseRI GAGGAG 2 cut(s) 25, 902
BseSI GKGCMC 1 cut(s) 1119
BseX3I CGGCCG 1 cut(s) 951
BseXI GCAGC 3 cut(s) 699, 966, 1191
BseYI CCCAGC 1 cut(s) 47
Bsh1285I CGRYCG 4 cut(s) 294, 438, 609, 954
BshFI GGCC 5 cut(s) 470, 645, 872, 953, 1117
BshNI GGYRCC 2 cut(s) 430, 1075
BsiEI CGRYCG 4 cut(s) 294, 438, 609, 954
BsiHKAI GWGCWC 4 cut(s) 171, 192, 209, 513
BsiHKCI CYCGRG 2 cut(s) 794, 855
BsiWI CGTACG 1 cut(s) 735
BslI CCNNNNNNNGG 7 cut(s) 85, 184, 477, 943, 1112, 1113, 1312
BsmAI GTCTC 7 cut(s) 37, 88, 292, 410, 852, 1189, 1428
BsmBI CGTCTC 4 cut(s) 88, 292, 410, 1189
BsmI GAATGC 1 cut(s) 715
BsnI GGCC 5 cut(s) 470, 645, 872, 953, 1117
Bso31I GGTCTC 1 cut(s) 37
BsoBI CYCGRG 2 cut(s) 794, 855
Bsp120I GGGCCC 1 cut(s) 1115
Bsp1286I GDGCHC 6 cut(s) 171, 192, 209, 513, 734, 1119
Bsp13I TCCGGA 1 cut(s) 1321
Bsp143I GATC 9 cut(s) 390, 435, 442, 606, 891, 928, 984, 1022, 1194
Bsp68I TCGCGA 1 cut(s) 383
BspANI GGCC 5 cut(s) 470, 645, 872, 953, 1117
BspCNI CTCAG 5 cut(s) 459, 714, 954, 1056, 1332
BspEI TCCGGA 1 cut(s) 1321
BspMAI CTGCAG 1 cut(s) 1209
BspMI ACCTGC 1 cut(s) 1252
BspPI GGATC 3 cut(s) 936, 992, 1189
BspQI GCTCTTC 1 cut(s) 722
BspT107I GGYRCC 2 cut(s) 430, 1075
BspTNI GGTCTC 1 cut(s) 37
BsrFI RCCGGY 3 cut(s) 250, 324, 342
BsrI ACTGG 1 cut(s) 1092
BssAI RCCGGY 3 cut(s) 250, 324, 342
BssECI CCNNGG 4 cut(s) 551, 646, 1107, 1118
BssMI GATC 9 cut(s) 390, 435, 442, 606, 891, 928, 984, 1022, 1194
BssNI GRCGYC 3 cut(s) 431, 690, 741
BssSI CACGAG 1 cut(s) 1034
BssT1I CCWWGG 1 cut(s) 1107
Bst2BI CACGAG 1 cut(s) 1034
Bst2UI CCWGG 4 cut(s) 647, 680, 788, 1120
Bst4CI ACNGT 9 cut(s) 295, 315, 517, 600, 629, 772, 884, 994, 1449
Bst6I CTCTTC 1 cut(s) 722
BstACI GRCGYC 3 cut(s) 431, 690, 741
BstAPI GCANNNNNTGC 1 cut(s) 1075
BstBAI YACGTR 2 cut(s) 564, 889
BstDEI CTNAG 5 cut(s) 446, 722, 962, 1064, 1340
BstF5I GGATG 1 cut(s) 588
BstH2I RGCGCY 4 cut(s) 343, 434, 1034, 1214
BstHHI GCGC 8 cut(s) 330, 342, 423, 433, 589, 834, 1033, 1213
BstKTI GATC 9 cut(s) 393, 438, 445, 609, 894, 931, 987, 1025, 1197
BstMAI GTCTC 7 cut(s) 37, 88, 292, 410, 852, 1189, 1428
BstMBI GATC 9 cut(s) 390, 435, 442, 606, 891, 928, 984, 1022, 1194
BstMCI CGRYCG 4 cut(s) 294, 438, 609, 954
BstNI CCWGG 4 cut(s) 647, 680, 788, 1120
BstSCI CCNGG 9 cut(s) 91, 183, 645, 665, 678, 786, 816, 948, 1118
BstSFI CTRYAG 1 cut(s) 1205
BstSLI GKGCMC 1 cut(s) 1119
BstV1I GCAGC 3 cut(s) 699, 966, 1191
BstV2I GAAGAC 2 cut(s) 414, 1397
BstX2I RGATCY 2 cut(s) 928, 1194
BstYI RGATCY 2 cut(s) 928, 1194
BstZI CGGCCG 1 cut(s) 951
Bsu36I CCTNAGG 1 cut(s) 722
BsuRI GGCC 5 cut(s) 470, 645, 872, 953, 1117
BtgZI GCGATG 3 cut(s) 364, 398, 1151
BtrI CACGTC 2 cut(s) 82, 453
BtsCI GGATG 1 cut(s) 588
BtsIMutI CAGTG 1 cut(s) 999
BtuMI TCGCGA 1 cut(s) 383
BveI ACCTGC 1 cut(s) 1252
CaiI CAGNNNCTG 1 cut(s) 1267
CfoI GCGC 8 cut(s) 330, 342, 423, 433, 589, 834, 1033, 1213
Cfr10I RCCGGY 3 cut(s) 250, 324, 342
Cfr13I GGNCC 8 cut(s) 469, 643, 790, 805, 946, 1102, 1115, 1116
CseI GACGC 4 cut(s) 427, 698, 749, 1391
CsiI ACCWGGT 1 cut(s) 786
Csp6I GTAC 8 cut(s) 316, 601, 634, 736, 775, 1081, 1147, 1255
CviAII CATG 3 cut(s) 484, 746, 829
CviQI GTAC 8 cut(s) 316, 601, 634, 736, 775, 1081, 1147, 1255
DdeI CTNAG 5 cut(s) 446, 722, 962, 1064, 1340
DinI GGCGCC 1 cut(s) 432
DpnI GATC 9 cut(s) 392, 437, 444, 608, 893, 930, 986, 1024, 1196
DpnII GATC 9 cut(s) 390, 435, 442, 606, 891, 928, 984, 1022, 1194
DraIII CACNNNGTG 1 cut(s) 517
DrdI GACNNNNNNGTC 2 cut(s) 298, 746
DseDI GACNNNNNNGTC 2 cut(s) 298, 746
EaeI YGGCCR 1 cut(s) 951
EagI CGGCCG 1 cut(s) 951
Eam1104I CTCTTC 1 cut(s) 722
EarI CTCTTC 1 cut(s) 722
EciI GGCGGA 5 cut(s) 97, 124, 167, 503, 1446
Ecl136II GAGCTC 2 cut(s) 190, 207
EclXI CGGCCG 1 cut(s) 951
Eco130I CCWWGG 1 cut(s) 1107
Eco24I GRGCYC 4 cut(s) 192, 209, 734, 1119
Eco31I GGTCTC 1 cut(s) 37
Eco47I GGWCC 4 cut(s) 790, 805, 946, 1102
Eco52I CGGCCG 1 cut(s) 951
Eco53kI GAGCTC 2 cut(s) 190, 207
Eco57I CTGAAG 3 cut(s) 989, 1003, 1199
Eco72I CACGTG 1 cut(s) 564
Eco81I CCTNAGG 1 cut(s) 722
Eco88I CYCGRG 2 cut(s) 794, 855
EcoICRI GAGCTC 2 cut(s) 190, 207
EcoO109I RGGNCCY 2 cut(s) 790, 1115
EcoRII CCWGG 4 cut(s) 645, 678, 786, 1118
EcoT14I CCWWGG 1 cut(s) 1107
EcoT38I GRGCYC 4 cut(s) 192, 209, 734, 1119
EgeI GGCGCC 1 cut(s) 432
EheI GGCGCC 1 cut(s) 432
ErhI CCWWGG 1 cut(s) 1107
Esp3I CGTCTC 4 cut(s) 88, 292, 410, 1189
FaeI CATG 3 cut(s) 487, 749, 832
FaiI YATR 8 cut(s) 44, 485, 697, 747, 830, 904, 1071, 1085
FalI AAGNNNNNCTT 2 cut(s) 1184, 1216
FatI CATG 3 cut(s) 483, 745, 828
FauI CCCGC 1 cut(s) 479
FblI GTMKAC 1 cut(s) 750
FokI GGATG 1 cut(s) 595
FriOI GRGCYC 4 cut(s) 192, 209, 734, 1119
FspBI CTAG 1 cut(s) 309
GlaI GCGC 8 cut(s) 329, 341, 422, 432, 588, 833, 1032, 1212
GsaI CCCAGC 1 cut(s) 51
GsuI CTGGAG 2 cut(s) 223, 1376
HaeII RGCGCY 4 cut(s) 343, 434, 1034, 1214
HaeIII GGCC 5 cut(s) 470, 645, 872, 953, 1117
HgaI GACGC 4 cut(s) 427, 698, 749, 1391
HhaI GCGC 8 cut(s) 330, 342, 423, 433, 589, 834, 1033, 1213
Hin1I GRCGYC 3 cut(s) 431, 690, 741
Hin1II CATG 3 cut(s) 487, 749, 832
Hin6I GCGC 8 cut(s) 328, 340, 421, 431, 587, 832, 1031, 1211
HinP1I GCGC 8 cut(s) 328, 340, 421, 431, 587, 832, 1031, 1211
HincII GTYRAC 1 cut(s) 751
HindII GTYRAC 1 cut(s) 751
HphI GGTGA 3 cut(s) 926, 1054, 1327
Hpy166II GTNNAC 5 cut(s) 751, 775, 808, 997, 1102
Hpy8I GTNNAC 5 cut(s) 751, 775, 808, 997, 1102
Hpy99I CGWCG 6 cut(s) 404, 443, 457, 479, 692, 743
HpyAV CCTTC 4 cut(s) 572, 947, 1021, 1291
HpyCH4III ACNGT 9 cut(s) 295, 315, 517, 600, 629, 772, 884, 994, 1449
HpyCH4IV ACGT 6 cut(s) 81, 452, 563, 810, 888, 1394
HpyCH4V TGCA 4 cut(s) 699, 715, 1056, 1207
HpyF3I CTNAG 5 cut(s) 446, 722, 962, 1064, 1340
HpySE526I ACGT 6 cut(s) 81, 452, 563, 810, 888, 1394
Hsp92I GRCGYC 3 cut(s) 431, 690, 741
Hsp92II CATG 3 cut(s) 487, 749, 832
HspAI GCGC 8 cut(s) 328, 340, 421, 431, 587, 832, 1031, 1211
KasI GGCGCC 1 cut(s) 430
Kpn2I TCCGGA 1 cut(s) 1321
KroI GCCGGC 2 cut(s) 250, 342
KroNI GCCGGC 2 cut(s) 252, 344
Kzo9I GATC 9 cut(s) 390, 435, 442, 606, 891, 928, 984, 1022, 1194
LguI GCTCTTC 1 cut(s) 722
Lsp1109I GCAGC 3 cut(s) 699, 966, 1191
LweI GCATC 1 cut(s) 855
MabI ACCWGGT 1 cut(s) 786
MaeI CTAG 1 cut(s) 309
MaeII ACGT 6 cut(s) 81, 452, 563, 810, 888, 1394
MaeIII GTNAC 5 cut(s) 623, 884, 1042, 1331, 1422
MalI GATC 9 cut(s) 392, 437, 444, 608, 893, 930, 986, 1024, 1196
MboI GATC 9 cut(s) 390, 435, 442, 606, 891, 928, 984, 1022, 1194
MboII GAAGA 8 cut(s) 419, 604, 739, 923, 982, 1168, 1204, 1402
MflI RGATCY 2 cut(s) 928, 1194
MhlI GDGCHC 6 cut(s) 171, 192, 209, 513, 734, 1119
MluI ACGCGT 1 cut(s) 1251
Mly113I GGCGCC 1 cut(s) 431
MmeI TCCRAC 3 cut(s) 63, 327, 1325
MroI TCCGGA 1 cut(s) 1321
MroNI GCCGGC 2 cut(s) 250, 342
MroXI GAANNNNTTC 1 cut(s) 1241
MslI CAYNNNNRTG 2 cut(s) 383, 833
MspA1I CMGCKG 1 cut(s) 979
MspR9I CCNGG 9 cut(s) 93, 185, 647, 667, 680, 788, 818, 950, 1120
Mva1269I GAATGC 1 cut(s) 715
MvaI CCWGG 4 cut(s) 647, 680, 788, 1120
NaeI GCCGGC 2 cut(s) 252, 344
NarI GGCGCC 1 cut(s) 431
NciI CCSGG 5 cut(s) 93, 185, 667, 818, 950
NdeII GATC 9 cut(s) 390, 435, 442, 606, 891, 928, 984, 1022, 1194
NgoMIV GCCGGC 2 cut(s) 250, 342
NlaIII CATG 3 cut(s) 487, 749, 832
NmeAIII GCCGAG 3 cut(s) 532, 729, 1189
NmuCI GTSAC 2 cut(s) 1042, 1331
NruI TCGCGA 1 cut(s) 383
PaeR7I CTCGAG 2 cut(s) 794, 855
PaqCI CACCTGC 1 cut(s) 1252
PciSI GCTCTTC 1 cut(s) 722
PcsI WCGNNNNNNNCGW 4 cut(s) 291, 399, 747, 756
PctI GAATGC 1 cut(s) 715
PdiI GCCGGC 2 cut(s) 252, 344
PdmI GAANNNNTTC 1 cut(s) 1241
PfeI GAWTC 6 cut(s) 241, 851, 1123, 1178, 1242, 1414
Pfl23II CGTACG 1 cut(s) 735
PflMI CCANNNNNTGG 1 cut(s) 1312
PfoI TCCNGGA 1 cut(s) 183
Ple19I CGATCG 2 cut(s) 438, 609
PluTI GGCGCC 1 cut(s) 434
PmaCI CACGTG 1 cut(s) 564
PmlI CACGTG 1 cut(s) 564
Ppu21I YACGTR 2 cut(s) 564, 889
PpuMI RGGWCCY 1 cut(s) 790
Psp124BI GAGCTC 2 cut(s) 192, 209
Psp5II RGGWCCY 1 cut(s) 790
Psp6I CCWGG 4 cut(s) 645, 678, 786, 1118
PspCI CACGTG 1 cut(s) 564
PspFI CCCAGC 1 cut(s) 47
PspGI CCWGG 4 cut(s) 645, 678, 786, 1118
PspLI CGTACG 1 cut(s) 735
PspOMI GGGCCC 1 cut(s) 1115
PspPI GGNCC 8 cut(s) 469, 643, 790, 805, 946, 1102, 1115, 1116
PspPPI RGGWCCY 1 cut(s) 790
PspXI VCTCGAGB 1 cut(s) 794
PsrI GAACNNNNNNTAC 2 cut(s) 668, 700
PstI CTGCAG 1 cut(s) 1209
PstNI CAGNNNCTG 1 cut(s) 1267
PsuI RGATCY 2 cut(s) 928, 1194
PvuI CGATCG 2 cut(s) 438, 609
PvuII CAGCTG 1 cut(s) 979
RruI TCGCGA 1 cut(s) 383
RsaI GTAC 8 cut(s) 317, 602, 635, 737, 776, 1082, 1148, 1256
RsaNI GTAC 8 cut(s) 316, 601, 634, 736, 775, 1081, 1147, 1255
RseI CAYNNNNRTG 2 cut(s) 383, 833
SacI GAGCTC 2 cut(s) 192, 209
SalI GTCGAC 1 cut(s) 749
SapI GCTCTTC 1 cut(s) 722
Sau3AI GATC 9 cut(s) 390, 435, 442, 606, 891, 928, 984, 1022, 1194
Sau96I GGNCC 8 cut(s) 469, 643, 790, 805, 946, 1102, 1115, 1116
ScrFI CCNGG 9 cut(s) 93, 185, 647, 667, 680, 788, 818, 950, 1120
SduI GDGCHC 6 cut(s) 171, 192, 209, 513, 734, 1119
SexAI ACCWGGT 1 cut(s) 786
SfaNI GCATC 1 cut(s) 855
SfcI CTRYAG 1 cut(s) 1205
SfoI GGCGCC 1 cut(s) 432
Sfr274I CTCGAG 2 cut(s) 794, 855
SinI GGWCC 4 cut(s) 790, 805, 946, 1102
SlaI CTCGAG 2 cut(s) 794, 855
SmiMI CAYNNNNRTG 2 cut(s) 383, 833
SmlI CTYRAG 4 cut(s) 245, 347, 794, 855
SmoI CTYRAG 4 cut(s) 245, 347, 794, 855
SspDI GGCGCC 1 cut(s) 430
SspMI CTAG 1 cut(s) 309
SstI GAGCTC 2 cut(s) 192, 209
StyD4I CCNGG 9 cut(s) 91, 183, 645, 665, 678, 786, 816, 948, 1118
StyI CCWWGG 1 cut(s) 1107
TaaI ACNGT 9 cut(s) 295, 315, 517, 600, 629, 772, 884, 994, 1449
TaiI ACGT 6 cut(s) 84, 455, 566, 813, 891, 1397
TaqII GACCGA 1 cut(s) 140
TatI WGTACW 2 cut(s) 600, 1146
TauI GCSGC 7 cut(s) 113, 140, 528, 846, 875, 1136, 1388
TfiI GAWTC 6 cut(s) 241, 851, 1123, 1178, 1242, 1414
TscAI CASTG 1 cut(s) 999
TseFI GTSAC 2 cut(s) 1042, 1331
TseI GCWGC 3 cut(s) 712, 979, 1204
Tsp45I GTSAC 2 cut(s) 1042, 1331
TspGWI ACGGA 4 cut(s) 621, 913, 1019, 1171
TspRI CASTG 1 cut(s) 999
Van91I CCANNNNNTGG 1 cut(s) 1312
VpaK11BI GGWCC 4 cut(s) 790, 805, 946, 1102
XhoI CTCGAG 2 cut(s) 794, 855
XmiI GTMKAC 1 cut(s) 750
XmnI GAANNNNTTC 1 cut(s) 1241
XspI CTAG 1 cut(s) 309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.