MD07G1215700.v1.1

Nematode resistance protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0013472
Physical Location & Seq
Reverse (-)
29288282 .. 29289742
1461 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1215700.v1.1.491

Sequence Viewer

Length: 1461 bp
ATGGTTGATTTAGATTGGAAGGCAAAGATCATCTCCTCCAACATGCCCAGTAAATCCCCCAAGCTCTCCAACAAGCTCCACGTTTCGGTTCCCGGTTCGTTTCGCGCCGCCTCCCAAGTCCAGACCGATATTTCGGCCGCCTCCGATATGTCCTGCTCCACCTACGAGCAGTACCTCCGCCTCCCGGAGCTCCGACAGCTCTGGAGCTCCCACGACTTCCCCTCTTGGAAGAACGAGTCGATTCTCAAACCGGCTCTCCAAGCTCTCGAAATCACGTTCCGGTTCCTCTCGACTGTTTTGTCCGATCCTAGACCGTATTCGAACCGGCGCGAGTGGAAGCGCCGGCTCGAGTCGCTCACTACCAGCCAGATACAGCTCATCGCCATGTTGATCGAGGACGAAGAGGAAGACAGCGAGACGCGCGGAATGGCGCCGATCGTTGATCTCAGCACGTCGAATGGGGAGCTTGCCCGCGACGGGAGCATGGCGGAGGTGTGGAGTTCGGGGGAGCACACGGTGGTGAGCCGCATCAGCGAGGCCAGTTTGCTGCCACGACTCGCCACGTGGCAGAAATCGGAAGGGATGGCGCAGAAGATCTTGTACTCGATCGAGTGCGAGATGAGGAACTGTCCGTACTCGCTGGGTCTGGGTGAGCCGAACCTCGCCGGGAAACCGAACCTGGATTACGACGCCGTTTGCAAGCCGAGCGAGCTGCATACGCTGAGGAAGAGCCCGTACGACCCCCACGTCGACAGCTACGAGAACCAGACGGTGTACGCCACGCACCAGGTCCTCGAGTCGTGGGTCCACGTTTGCCGGGAGCTTCTCAAGCGCGTAACGAGCCGCATCGAATCTCGAGACTTCGAAAAGGCTGCGAGCGACTGTTACGTGATCGAACGGATATGGAAGCTCCTGGCGGAGATAGAGGATCTCCACCTTCTGATGGACCCGGCCGATTTTTTGAGGCTGAAGAATCAGCTGCAGATCAAGACGGTGGACGATACGGAGTCGTTTTGCTTCAGATCGAAGGCGCTCGTGGAGGTGACGAAGCTCTGCAAGGAACTAAGGCATAAGGTGCCGTTCATATTGGGGGTTGAGGTGGACCCCAAGGGTGGGCCCCGGATTCAGGAGGCGGCGATGAGGCTGTACTCGGAGAAGAAGGCCGGTTCGGACTCCGACTCCGGCTCGGAGAAGATCCACGTGCTGCAGGCGCTTCAGGCGATGGAGTCGGCGCTGAAGCGTTTCTACTACGCGTACAAGCAGGTGCTGGTGGTGTTGATGGGGAGCTTGGAGGCGAAGGGGAACCGAGTTGTGGTGAGTCCGGAGACCTGTGACTCGCTGAGTCGGATATTTCTGGAGCCGACTTATTTCCCGAGCTTGGACGCGGCGAAGACGTTTTTGGGGGATAGTATAAATCACGATATACACAGCGGAGACAGGCGGAGTCGGCGGATGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Hs1pro-1_C Hs1pro-1_N

Protein Analysis

487

Amino Acids

55.16

Weight (kDa)

6.12

Isoelectric Point (pI)

55.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hs1pro-1_N PF07231 1 - 204 5.2e-86 Hs1pro-1 N-terminus
Hs1pro-1_C PF07014 207 - 470 2.2e-131 Hs1pro-1 protein C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013472)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G40000
fragaria_vesca FvH4_7g24150
malus_domestica MD01G1148800.v1.1 MD07G1215700.v1.1
prunus_persica Prupe.2G247600_v2.0.a1
pyrus_communis pycom01g16720 pycom07g19800
rosa_chinensis RchiOBHm_Chr1g0369681
rosa_laevigata RLG00000027112
rosa_multiflora Rmu_sc0001154.1_g000025
rosa_roxburghii Rroxscaffold_2G00131660 Rroxscaffold_4G00287440
rosa_rugosa Rorug01G0351800
rosa_samantha Rh1AG359900 Rh1BG323800 Rh1CG337000 Rh1DG354400
rosa_wichuraiana Rw1G031710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1252
AasI GACNNNNNNGTC 2 cut(s) 298, 746
Acc36I ACCTGC 1 cut(s) 1252
AccB1I GGYRCC 2 cut(s) 430, 1075
AccI GTMKAC 1 cut(s) 750
AccII CGCG 8 cut(s) 105, 330, 421, 423, 474, 834, 1253, 1385
AccIII TCCGGA 1 cut(s) 1321
AclWI GGATC 3 cut(s) 299, 936, 1189
AcoI YGGCCR 2 cut(s) 135, 951
AcuI CTGAAG 4 cut(s) 989, 1003, 1199, 1256
AcvI CACGTG 2 cut(s) 564, 1201
AcyI GRCGYC 2 cut(s) 431, 690
AdeI CACNNNGTG 1 cut(s) 517
AfaI GTAC 7 cut(s) 173, 602, 635, 737, 776, 1148, 1256
AfiI CCNNNNNNNGG 9 cut(s) 85, 184, 477, 943, 1112, 1113, 1126, 1312, 1378
AflIII ACRYGT 1 cut(s) 1251
AjiI CACGTC 2 cut(s) 453, 748
AjnI CCWGG 3 cut(s) 678, 786, 912
AjuI GAANNNNNNNTTGG 2 cut(s) 1382, 1414
AleI CACNNNNGTG 1 cut(s) 518
Alw21I GWGCWC 3 cut(s) 192, 209, 513
Alw26I GTCTC 4 cut(s) 410, 852, 1319, 1428
AlwI GGATC 3 cut(s) 299, 936, 1189
AlwNI CAGNNNCTG 1 cut(s) 1267
Ama87I CYCGRG 4 cut(s) 347, 794, 855, 1372
Aor13HI TCCGGA 1 cut(s) 1321
AoxI GGCC 5 cut(s) 135, 537, 951, 1115, 1161
ApaI GGGCCC 1 cut(s) 1119
ApeKI GCWGC 5 cut(s) 547, 712, 872, 979, 1204
ArsI GACNNNNNNTTYG 2 cut(s) 115, 147
Asp700I GAANNNNTTC 1 cut(s) 1241
AspS9I GGNCC 6 cut(s) 790, 805, 946, 1102, 1115, 1116
AsuC2I CCSGG 6 cut(s) 93, 185, 667, 818, 950, 1120
AsuHPI GGTGA 4 cut(s) 532, 662, 1054, 1327
AsuII TTCGAA 2 cut(s) 320, 864
AvaI CYCGRG 4 cut(s) 347, 794, 855, 1372
AvaII GGWCC 4 cut(s) 790, 805, 946, 1102
BaeGI GKGCMC 1 cut(s) 1119
BanI GGYRCC 2 cut(s) 430, 1075
BanII GRGCYC 4 cut(s) 192, 209, 734, 1119
BarI GAAGNNNNNNTAC 6 cut(s) 584, 616, 719, 751, 1229, 1261
BauI CACGAG 1 cut(s) 1034
BbrPI CACGTG 2 cut(s) 564, 1201
BbsI GAAGAC 2 cut(s) 414, 1397
Bbv12I GWGCWC 3 cut(s) 192, 209, 513
BbvCI CCTCAGC 1 cut(s) 722
BbvI GCAGC 5 cut(s) 534, 699, 859, 966, 1191
BccI CCATC 4 cut(s) 577, 937, 1216, 1273
BceAI ACGGC 2 cut(s) 677, 1063
BcgI CGANNNNNNTGC 4 cut(s) 694, 728, 854, 888
BciT130I CCWGG 3 cut(s) 680, 788, 914
BcnI CCSGG 6 cut(s) 93, 185, 667, 818, 950, 1120
BcoDI GTCTC 4 cut(s) 410, 852, 1319, 1428
BfaI CTAG 1 cut(s) 309
BfmI CTRYAG 2 cut(s) 980, 1205
BfoI RGCGCY 5 cut(s) 343, 434, 1034, 1214, 1235
BfuAI ACCTGC 1 cut(s) 1252
BglII AGATCT 1 cut(s) 594
Bme1390I CCNGG 9 cut(s) 93, 185, 667, 680, 788, 818, 914, 950, 1120
Bme18I GGWCC 4 cut(s) 790, 805, 946, 1102
BmeT110I CYCGRG 4 cut(s) 347, 794, 855, 1372
BmgBI CACGTC 2 cut(s) 453, 748
BmgT120I GGNCC 6 cut(s) 790, 805, 946, 1102, 1115, 1116
BmrFI CCNGG 9 cut(s) 93, 185, 667, 680, 788, 818, 914, 950, 1120
BmrI ACTGGG 1 cut(s) 42
BmsI GCATC 3 cut(s) 537, 855, 1443
BmuI ACTGGG 1 cut(s) 42
BpiI GAAGAC 2 cut(s) 414, 1397
BpmI CTGGAG 2 cut(s) 223, 1376
Bpu10I CCTNAGC 1 cut(s) 722
Bpu14I TTCGAA 2 cut(s) 320, 864
BpuEI CTTGAG 1 cut(s) 812
BpuMI CCSGG 6 cut(s) 93, 185, 667, 818, 950, 1120
BsaAI YACGTR 3 cut(s) 564, 889, 1201
BsaHI GRCGYC 2 cut(s) 431, 690
BsaI GGTCTC 1 cut(s) 1319
BsaJI CCNNGG 2 cut(s) 1107, 1118
BsaWI WCCGGW 2 cut(s) 279, 1321
BsaXI ACNNNNNCTCC 4 cut(s) 240, 270, 1163, 1193
Bsc4I CCNNNNNNNGG 9 cut(s) 85, 184, 477, 943, 1112, 1113, 1126, 1312, 1378
Bse118I RCCGGY 4 cut(s) 250, 324, 342, 1163
Bse1I ACTGG 2 cut(s) 48, 540
BseAI TCCGGA 1 cut(s) 1321
BseBI CCWGG 3 cut(s) 680, 788, 914
BseDI CCNNGG 2 cut(s) 1107, 1118
BseGI GGATG 2 cut(s) 588, 1458
BseLI CCNNNNNNNGG 9 cut(s) 85, 184, 477, 943, 1112, 1113, 1126, 1312, 1378
BseMII CTCAG 3 cut(s) 460, 713, 1331
BseNI ACTGG 2 cut(s) 48, 540
BseRI GAGGAG 1 cut(s) 25
BseSI GKGCMC 1 cut(s) 1119
BseX3I CGGCCG 2 cut(s) 135, 951
BseXI GCAGC 5 cut(s) 534, 699, 859, 966, 1191
BseYI CCCAGC 1 cut(s) 640
Bsh1236I CGCG 8 cut(s) 105, 330, 421, 423, 474, 834, 1253, 1385
Bsh1285I CGRYCG 4 cut(s) 138, 438, 609, 954
BshFI GGCC 5 cut(s) 137, 539, 953, 1117, 1163
BshNI GGYRCC 2 cut(s) 430, 1075
BsiEI CGRYCG 4 cut(s) 138, 438, 609, 954
BsiHKAI GWGCWC 3 cut(s) 192, 209, 513
BsiHKCI CYCGRG 4 cut(s) 347, 794, 855, 1372
BsiWI CGTACG 1 cut(s) 735
BslI CCNNNNNNNGG 9 cut(s) 85, 184, 477, 943, 1112, 1113, 1126, 1312, 1378
BsmAI GTCTC 4 cut(s) 410, 852, 1319, 1428
BsmBI CGTCTC 1 cut(s) 410
BsnI GGCC 5 cut(s) 137, 539, 953, 1117, 1163
Bso31I GGTCTC 1 cut(s) 1319
BsoBI CYCGRG 4 cut(s) 347, 794, 855, 1372
Bsp119I TTCGAA 2 cut(s) 320, 864
Bsp120I GGGCCC 1 cut(s) 1115
Bsp1286I GDGCHC 5 cut(s) 192, 209, 513, 734, 1119
Bsp13I TCCGGA 1 cut(s) 1321
BspANI GGCC 5 cut(s) 137, 539, 953, 1117, 1163
BspCNI CTCAG 3 cut(s) 459, 714, 1332
BspEI TCCGGA 1 cut(s) 1321
BspFNI CGCG 8 cut(s) 105, 330, 421, 423, 474, 834, 1253, 1385
BspMAI CTGCAG 2 cut(s) 984, 1209
BspMI ACCTGC 1 cut(s) 1252
BspPI GGATC 3 cut(s) 299, 936, 1189
BspQI GCTCTTC 1 cut(s) 722
BspT104I TTCGAA 2 cut(s) 320, 864
BspT107I GGYRCC 2 cut(s) 430, 1075
BspTNI GGTCTC 1 cut(s) 1319
BsrFI RCCGGY 4 cut(s) 250, 324, 342, 1163
BsrI ACTGG 2 cut(s) 48, 540
BssAI RCCGGY 4 cut(s) 250, 324, 342, 1163
BssECI CCNNGG 2 cut(s) 1107, 1118
BssNI GRCGYC 2 cut(s) 431, 690
BssSI CACGAG 1 cut(s) 1034
BssT1I CCWWGG 1 cut(s) 1107
Bst2BI CACGAG 1 cut(s) 1034
Bst2UI CCWGG 3 cut(s) 680, 788, 914
Bst4CI ACNGT 7 cut(s) 295, 315, 517, 629, 772, 884, 994
Bst6I CTCTTC 2 cut(s) 396, 722
BstACI GRCGYC 2 cut(s) 431, 690
BstAPI GCANNNNNTGC 1 cut(s) 1075
BstBAI YACGTR 3 cut(s) 564, 889, 1201
BstBI TTCGAA 2 cut(s) 320, 864
BstC8I GCNNGC 7 cut(s) 344, 468, 472, 701, 710, 877, 1209
BstDEI CTNAG 4 cut(s) 446, 722, 1064, 1340
BstF5I GGATG 2 cut(s) 588, 1458
BstFNI CGCG 8 cut(s) 105, 330, 421, 423, 474, 834, 1253, 1385
BstH2I RGCGCY 5 cut(s) 343, 434, 1034, 1214, 1235
BstMAI GTCTC 4 cut(s) 410, 852, 1319, 1428
BstMCI CGRYCG 4 cut(s) 138, 438, 609, 954
BstNI CCWGG 3 cut(s) 680, 788, 914
BstNSI RCATGY 1 cut(s) 46
BstSCI CCNGG 9 cut(s) 91, 183, 665, 678, 786, 816, 912, 948, 1118
BstSFI CTRYAG 2 cut(s) 980, 1205
BstSLI GKGCMC 1 cut(s) 1119
BstUI CGCG 8 cut(s) 105, 330, 421, 423, 474, 834, 1253, 1385
BstV1I GCAGC 5 cut(s) 534, 699, 859, 966, 1191
BstV2I GAAGAC 2 cut(s) 414, 1397
BstX2I RGATCY 3 cut(s) 594, 928, 1194
BstYI RGATCY 3 cut(s) 594, 928, 1194
BstZI CGGCCG 2 cut(s) 135, 951
BsuRI GGCC 5 cut(s) 137, 539, 953, 1117, 1163
BtgZI GCGATG 3 cut(s) 364, 1151, 1235
BtrI CACGTC 2 cut(s) 453, 748
BtsCI GGATG 2 cut(s) 588, 1458
BveI ACCTGC 1 cut(s) 1252
Cac8I GCNNGC 7 cut(s) 344, 468, 472, 701, 710, 877, 1209
CaiI CAGNNNCTG 1 cut(s) 1267
Cfr10I RCCGGY 4 cut(s) 250, 324, 342, 1163
Cfr13I GGNCC 6 cut(s) 790, 805, 946, 1102, 1115, 1116
CseI GACGC 3 cut(s) 427, 698, 1391
CsiI ACCWGGT 1 cut(s) 786
Csp6I GTAC 7 cut(s) 172, 601, 634, 736, 775, 1147, 1255
CviAII CATG 3 cut(s) 43, 385, 484
CviQI GTAC 7 cut(s) 172, 601, 634, 736, 775, 1147, 1255
DdeI CTNAG 4 cut(s) 446, 722, 1064, 1340
DinI GGCGCC 1 cut(s) 432
DraIII CACNNNGTG 1 cut(s) 517
DrdI GACNNNNNNGTC 2 cut(s) 298, 746
DseDI GACNNNNNNGTC 2 cut(s) 298, 746
EaeI YGGCCR 2 cut(s) 135, 951
EagI CGGCCG 2 cut(s) 135, 951
Eam1104I CTCTTC 2 cut(s) 396, 722
EarI CTCTTC 2 cut(s) 396, 722
EciI GGCGGA 4 cut(s) 167, 503, 932, 1456
Ecl136II GAGCTC 2 cut(s) 190, 207
EclXI CGGCCG 2 cut(s) 135, 951
Eco130I CCWWGG 1 cut(s) 1107
Eco24I GRGCYC 4 cut(s) 192, 209, 734, 1119
Eco31I GGTCTC 1 cut(s) 1319
Eco47I GGWCC 4 cut(s) 790, 805, 946, 1102
Eco52I CGGCCG 2 cut(s) 135, 951
Eco53kI GAGCTC 2 cut(s) 190, 207
Eco57I CTGAAG 4 cut(s) 989, 1003, 1199, 1256
Eco72I CACGTG 2 cut(s) 564, 1201
Eco88I CYCGRG 4 cut(s) 347, 794, 855, 1372
EcoICRI GAGCTC 2 cut(s) 190, 207
EcoO109I RGGNCCY 2 cut(s) 790, 1116
EcoRII CCWGG 3 cut(s) 678, 786, 912
EcoT14I CCWWGG 1 cut(s) 1107
EcoT38I GRGCYC 4 cut(s) 192, 209, 734, 1119
EgeI GGCGCC 1 cut(s) 432
EheI GGCGCC 1 cut(s) 432
ErhI CCWWGG 1 cut(s) 1107
Esp3I CGTCTC 1 cut(s) 410
FaeI CATG 3 cut(s) 46, 388, 487
FatI CATG 3 cut(s) 42, 384, 483
FauI CCCGC 1 cut(s) 479
FblI GTMKAC 1 cut(s) 750
FokI GGATG 1 cut(s) 595
FriOI GRGCYC 4 cut(s) 192, 209, 734, 1119
FspBI CTAG 1 cut(s) 309
GsaI CCCAGC 1 cut(s) 644
GsuI CTGGAG 2 cut(s) 223, 1376
HaeII RGCGCY 5 cut(s) 343, 434, 1034, 1214, 1235
HaeIII GGCC 5 cut(s) 137, 539, 953, 1117, 1163
HgaI GACGC 3 cut(s) 427, 698, 1391
Hin1I GRCGYC 2 cut(s) 431, 690
Hin1II CATG 3 cut(s) 46, 388, 487
HincII GTYRAC 1 cut(s) 751
HindII GTYRAC 1 cut(s) 751
HphI GGTGA 4 cut(s) 532, 662, 1054, 1327
Hpy166II GTNNAC 5 cut(s) 751, 775, 808, 997, 1102
Hpy8I GTNNAC 5 cut(s) 751, 775, 808, 997, 1102
Hpy99I CGWCG 4 cut(s) 457, 479, 692, 752
HpyAV CCTTC 6 cut(s) 13, 572, 947, 1021, 1153, 1291
HpyCH4III ACNGT 7 cut(s) 295, 315, 517, 629, 772, 884, 994
HpyCH4IV ACGT 9 cut(s) 81, 275, 452, 563, 747, 810, 888, 1200, 1394
HpyCH4V TGCA 6 cut(s) 699, 715, 982, 1056, 1207, 1456
HpyF3I CTNAG 4 cut(s) 446, 722, 1064, 1340
HpySE526I ACGT 9 cut(s) 81, 275, 452, 563, 747, 810, 888, 1200, 1394
Hsp92I GRCGYC 2 cut(s) 431, 690
Hsp92II CATG 3 cut(s) 46, 388, 487
KasI GGCGCC 1 cut(s) 430
Kpn2I TCCGGA 1 cut(s) 1321
KroI GCCGGC 1 cut(s) 342
KroNI GCCGGC 1 cut(s) 344
LguI GCTCTTC 1 cut(s) 722
Lsp1109I GCAGC 5 cut(s) 534, 699, 859, 966, 1191
LweI GCATC 3 cut(s) 537, 855, 1443
MabI ACCWGGT 1 cut(s) 786
MaeI CTAG 1 cut(s) 309
MaeII ACGT 9 cut(s) 81, 275, 452, 563, 747, 810, 888, 1200, 1394
MaeIII GTNAC 4 cut(s) 835, 884, 1042, 1331
MboII GAAGA 9 cut(s) 241, 413, 419, 604, 739, 982, 1168, 1204, 1402
MflI RGATCY 3 cut(s) 594, 928, 1194
MhlI GDGCHC 5 cut(s) 192, 209, 513, 734, 1119
MluI ACGCGT 1 cut(s) 1251
Mly113I GGCGCC 1 cut(s) 431
MmeI TCCRAC 5 cut(s) 63, 93, 217, 1200, 1325
MroI TCCGGA 1 cut(s) 1321
MroNI GCCGGC 1 cut(s) 342
MroXI GAANNNNTTC 1 cut(s) 1241
MslI CAYNNNNRTG 2 cut(s) 383, 518
MspA1I CMGCKG 2 cut(s) 979, 1431
MspR9I CCNGG 9 cut(s) 93, 185, 667, 680, 788, 818, 914, 950, 1120
MvaI CCWGG 3 cut(s) 680, 788, 914
MvnI CGCG 8 cut(s) 105, 330, 421, 423, 474, 834, 1253, 1385
NaeI GCCGGC 1 cut(s) 344
NarI GGCGCC 1 cut(s) 431
NciI CCSGG 6 cut(s) 93, 185, 667, 818, 950, 1120
NgoMIV GCCGGC 1 cut(s) 342
NlaIII CATG 3 cut(s) 46, 388, 487
NmeAIII GCCGAG 1 cut(s) 729
NmuCI GTSAC 2 cut(s) 1042, 1331
NspI RCATGY 1 cut(s) 46
NspV TTCGAA 2 cut(s) 320, 864
OliI CACNNNNGTG 1 cut(s) 518
PaeR7I CTCGAG 3 cut(s) 347, 794, 855
PaqCI CACCTGC 1 cut(s) 1252
PciSI GCTCTTC 1 cut(s) 722
PcsI WCGNNNNNNNCGW 2 cut(s) 744, 756
PdiI GCCGGC 1 cut(s) 344
PdmI GAANNNNTTC 1 cut(s) 1241
PfeI GAWTC 4 cut(s) 241, 851, 973, 1123
Pfl23II CGTACG 1 cut(s) 735
PfoI TCCNGGA 1 cut(s) 183
Ple19I CGATCG 2 cut(s) 438, 609
PluTI GGCGCC 1 cut(s) 434
PmaCI CACGTG 2 cut(s) 564, 1201
PmlI CACGTG 2 cut(s) 564, 1201
Ppu21I YACGTR 3 cut(s) 564, 889, 1201
PpuMI RGGWCCY 1 cut(s) 790
Psp124BI GAGCTC 2 cut(s) 192, 209
Psp5II RGGWCCY 1 cut(s) 790
Psp6I CCWGG 3 cut(s) 678, 786, 912
PspCI CACGTG 2 cut(s) 564, 1201
PspFI CCCAGC 1 cut(s) 640
PspGI CCWGG 3 cut(s) 678, 786, 912
PspLI CGTACG 1 cut(s) 735
PspOMI GGGCCC 1 cut(s) 1115
PspPI GGNCC 6 cut(s) 790, 805, 946, 1102, 1115, 1116
PspPPI RGGWCCY 1 cut(s) 790
PspXI VCTCGAGB 2 cut(s) 347, 794
PsrI GAACNNNNNNTAC 4 cut(s) 617, 649, 668, 700
PstI CTGCAG 2 cut(s) 984, 1209
PstNI CAGNNNCTG 1 cut(s) 1267
PsuI RGATCY 3 cut(s) 594, 928, 1194
PvuI CGATCG 2 cut(s) 438, 609
PvuII CAGCTG 1 cut(s) 979
RsaI GTAC 7 cut(s) 173, 602, 635, 737, 776, 1148, 1256
RsaNI GTAC 7 cut(s) 172, 601, 634, 736, 775, 1147, 1255
RseI CAYNNNNRTG 2 cut(s) 383, 518
SacI GAGCTC 2 cut(s) 192, 209
SalI GTCGAC 1 cut(s) 749
SapI GCTCTTC 1 cut(s) 722
Sau96I GGNCC 6 cut(s) 790, 805, 946, 1102, 1115, 1116
ScrFI CCNGG 9 cut(s) 93, 185, 667, 680, 788, 818, 914, 950, 1120
SduI GDGCHC 5 cut(s) 192, 209, 513, 734, 1119
SexAI ACCWGGT 1 cut(s) 786
SfaNI GCATC 3 cut(s) 537, 855, 1443
SfcI CTRYAG 2 cut(s) 980, 1205
SfoI GGCGCC 1 cut(s) 432
Sfr274I CTCGAG 3 cut(s) 347, 794, 855
SfuI TTCGAA 2 cut(s) 320, 864
SinI GGWCC 4 cut(s) 790, 805, 946, 1102
SlaI CTCGAG 3 cut(s) 347, 794, 855
SmiMI CAYNNNNRTG 2 cut(s) 383, 518
SmlI CTYRAG 4 cut(s) 347, 794, 827, 855
SmoI CTYRAG 4 cut(s) 347, 794, 827, 855
SspDI GGCGCC 1 cut(s) 430
SspMI CTAG 1 cut(s) 309
SstI GAGCTC 2 cut(s) 192, 209
StyD4I CCNGG 9 cut(s) 91, 183, 665, 678, 786, 816, 912, 948, 1118
StyI CCWWGG 1 cut(s) 1107
TaaI ACNGT 7 cut(s) 295, 315, 517, 629, 772, 884, 994
TaiI ACGT 9 cut(s) 84, 278, 455, 566, 750, 813, 891, 1203, 1397
TaqII GACCGA 1 cut(s) 140
TatI WGTACW 2 cut(s) 600, 1146
TauI GCSGC 6 cut(s) 110, 140, 528, 846, 1136, 1388
TfiI GAWTC 4 cut(s) 241, 851, 973, 1123
TseFI GTSAC 2 cut(s) 1042, 1331
TseI GCWGC 5 cut(s) 547, 712, 872, 979, 1204
Tsp45I GTSAC 2 cut(s) 1042, 1331
TspDTI ATGAA 1 cut(s) 1072
TspGWI ACGGA 3 cut(s) 621, 913, 1019
VpaK11BI GGWCC 4 cut(s) 790, 805, 946, 1102
XceI RCATGY 1 cut(s) 46
XhoI CTCGAG 3 cut(s) 347, 794, 855
XmiI GTMKAC 1 cut(s) 750
XmnI GAANNNNTTC 1 cut(s) 1241
XspI CTAG 1 cut(s) 309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.