MD01G1158600.v1.1

Dehydration-responsive element-binding protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
26531200 .. 26533508
2309 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1158600.v1.1.491

Sequence Viewer

Length: 1197 bp
ATGGGAGCTTATGATCAAGGCGCTAACATGTCATCTCTGCCCTTGGATTCTTCAAGGAAGAGGAAGACGCGGAGCAGGCGAGATGGGAACTCTGTTGCTGAGACACTAGAAAAGTGGAAAGAGTATAATAAGAAACTGGAATCGGTTAATAACGAGGGGAAAACGCGTAAAGTGCCCGCCAAGGGGTCGAAGAAAGGCTGTATGAAAGGCAAGGGAGGGCCTGAGAATGCACGTTGCAATTACAGAGGTGTGAGGCAAAGGACATGGGGCAAGTGGGTCGCCGAGATTCGGGAGCCAGACAGGGGAAGCAGGCTTTGGTTGGGTACTTTTCCCACTGCCCTTGATGCTGCCCTTGCGTATGATGAGGCTGCGAAGGCCATGTATGGTACTGGTGCTCGCCTCAACCTCCCGCATGCGGCCAATTATCATCCATCGTCTTCACTGGAGACTTCTTCAGTTGCAACACCATCAGGGTCTTCTGCAGTGGCAACTCCAGGATGCTCTACTTCCACTTCAACCTCAAGTCGCTCTGAGATTTGTGGAGACGAGGATTCCAAGCTTTTTCTTAATGTGAAAAAGGAGGATGGTGAGGGCGAATCAAGGATGTATCCGTGGTCTACTGCGGTCCCTCAAGCCAGTGGTATGGTTAAGCCAGAAATCATTGAGGATTTCACTATGGATTATCTTCGTAATAGTCAACAACAACCTGTCGTCAAACCGGAAGCAGGAGTTGAGGATCATAATTGGAATGGCGGAGAAGGTTTTATTGGGGATTATTCAGAGAACTTCACAACCGACGAGTTGTTTGATATGGATGAGATGTTTGATGTAAATGAACTGTTGATGCCTTCAGATGATATTTCCCTTTGCAATTCAGGATCGGAGCAAGTATGGAGAGCTGACGTTGGTCAGTCGGGCATGGAGACTCTCAGCAGTGAGAGGCCATCAAATTTGTCGTACCAGCTGCAGTTTCCAGACGCCAAGCTGCTCGGGAGTCTGCAGCACATGGAGCATGCCCCATTGAACTTCGAATACGGTTTTGATTTCAAGAAGCAAGAAAAGGAGGGGAGTAATCATACCGGCCAAGATGATCAAGGGTACTTCAATCTGGGATTGTCTGACTTAGATTTGGAAGGATTCACAGGAGGAATAACACAATCCGGAGATGGAGGTTACAACTATTCGATGGAAATGTGA

Protein Analysis

399

Amino Acids

43.82

Weight (kDa)

4.93

Isoelectric Point (pI)

45.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AP2 PF00847 80 - 129 3.1e-14 AP2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014804)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 617
AccII CGCG 2 cut(s) 70, 166
AccIII TCCGGA 1 cut(s) 1160
AciI CCGC 6 cut(s) 70, 177, 410, 416, 623, 753
AclWI GGATC 2 cut(s) 744, 886
AcoI YGGCCR 2 cut(s) 417, 1081
AcsI RAATTY 1 cut(s) 949
AcuI CTGAAG 2 cut(s) 438, 834
AcyI GRCGYC 1 cut(s) 978
AfaI GTAC 4 cut(s) 325, 388, 959, 1100
AfiI CCNNNNNNNGG 6 cut(s) 182, 183, 288, 302, 415, 725
AflIII ACRYGT 2 cut(s) 27, 164
AgsI TTSAA 5 cut(s) 54, 516, 1024, 1048, 1105
AjnI CCWGG 1 cut(s) 493
AjuI GAANNNNNNNTTGG 4 cut(s) 298, 330, 750, 782
AluBI AGCT 5 cut(s) 8, 559, 899, 964, 985
AluI AGCT 5 cut(s) 8, 559, 899, 964, 985
Alw21I GWGCWC 1 cut(s) 397
Alw26I GTCTC 4 cut(s) 95, 440, 537, 917
AlwI GGATC 2 cut(s) 744, 886
Ama87I CYCGRG 1 cut(s) 989
Aor13HI TCCGGA 1 cut(s) 1160
AoxI GGCC 5 cut(s) 218, 375, 417, 941, 1081
ApeKI GCWGC 5 cut(s) 347, 368, 964, 985, 1000
ApoI RAATTY 1 cut(s) 949
ArsI GACNNNNNNTTYG 2 cut(s) 788, 820
AspLEI GCGC 1 cut(s) 23
AspS9I GGNCC 2 cut(s) 218, 625
AsuHPI GGTGA 1 cut(s) 599
AsuII TTCGAA 1 cut(s) 1029
AvaI CYCGRG 1 cut(s) 989
AvaII GGWCC 1 cut(s) 625
BaeGI GKGCMC 1 cut(s) 177
BbsI GAAGAC 3 cut(s) 71, 429, 468
Bbv12I GWGCWC 1 cut(s) 397
BbvI GCAGC 5 cut(s) 334, 355, 951, 972, 1012
BccI CCATC 7 cut(s) 77, 439, 475, 578, 952, 1160, 1180
BcgI CGANNNNNNTGC 2 cut(s) 259, 293
BciT130I CCWGG 1 cut(s) 495
BciVI GTATCC 1 cut(s) 618
BclI TGATCA 2 cut(s) 13, 1090
BcoDI GTCTC 4 cut(s) 95, 440, 537, 917
BfaI CTAG 1 cut(s) 107
BfmI CTRYAG 3 cut(s) 480, 965, 998
BfoI RGCGCY 1 cut(s) 24
BfuI GTATCC 1 cut(s) 618
BisI GCNGC 6 cut(s) 348, 369, 417, 965, 986, 1001
BlsI GCNGC 6 cut(s) 349, 370, 418, 966, 987, 1002
Bme1390I CCNGG 1 cut(s) 495
Bme18I GGWCC 1 cut(s) 625
BmeT110I CYCGRG 1 cut(s) 989
BmgT120I GGNCC 2 cut(s) 218, 625
BmiI GGNNCC 2 cut(s) 294, 627
BmrFI CCNGG 1 cut(s) 495
BmsI GCATC 3 cut(s) 334, 488, 834
BoxI GACNNNNGTC 1 cut(s) 906
BpiI GAAGAC 3 cut(s) 71, 429, 468
BpmI CTGGAG 2 cut(s) 464, 477
Bpu14I TTCGAA 1 cut(s) 1029
BpuEI CTTGAG 2 cut(s) 505, 615
BsaHI GRCGYC 1 cut(s) 978
BsaJI CCNNGG 3 cut(s) 42, 180, 611
BsaWI WCCGGW 2 cut(s) 718, 1160
Bsc4I CCNNNNNNNGG 6 cut(s) 182, 183, 288, 302, 415, 725
Bse118I RCCGGY 1 cut(s) 1079
Bse1I ACTGG 4 cut(s) 141, 394, 447, 636
BseAI TCCGGA 1 cut(s) 1160
BseBI CCWGG 1 cut(s) 495
BseDI CCNNGG 3 cut(s) 42, 180, 611
BseGI GGATG 5 cut(s) 427, 503, 589, 609, 820
BseLI CCNNNNNNNGG 6 cut(s) 182, 183, 288, 302, 415, 725
BseMII CTCAG 4 cut(s) 90, 213, 522, 943
BseNI ACTGG 4 cut(s) 141, 394, 447, 636
BseSI GKGCMC 1 cut(s) 177
BseXI GCAGC 5 cut(s) 334, 355, 951, 972, 1012
Bsh1236I CGCG 2 cut(s) 70, 166
BshFI GGCC 5 cut(s) 220, 377, 419, 943, 1083
BsiHKAI GWGCWC 1 cut(s) 397
BsiHKCI CYCGRG 1 cut(s) 989
BsiSI CCGG 3 cut(s) 719, 1080, 1161
BslFI GGGAC 1 cut(s) 611
BslI CCNNNNNNNGG 6 cut(s) 182, 183, 288, 302, 415, 725
BsmAI GTCTC 4 cut(s) 95, 440, 537, 917
BsmBI CGTCTC 1 cut(s) 537
BsmFI GGGAC 1 cut(s) 611
BsmI GAATGC 1 cut(s) 232
BsnI GGCC 5 cut(s) 220, 377, 419, 943, 1083
BsoBI CYCGRG 1 cut(s) 989
Bsp119I TTCGAA 1 cut(s) 1029
Bsp1286I GDGCHC 2 cut(s) 177, 397
Bsp13I TCCGGA 1 cut(s) 1160
Bsp143I GATC 4 cut(s) 13, 736, 878, 1090
BspACI CCGC 6 cut(s) 70, 177, 410, 416, 623, 753
BspANI GGCC 5 cut(s) 220, 377, 419, 943, 1083
BspCNI CTCAG 4 cut(s) 91, 214, 523, 942
BspEI TCCGGA 1 cut(s) 1160
BspFNI CGCG 2 cut(s) 70, 166
BspLI GGNNCC 2 cut(s) 294, 627
BspMAI CTGCAG 3 cut(s) 484, 969, 1002
BspPI GGATC 2 cut(s) 744, 886
BspT104I TTCGAA 1 cut(s) 1029
BsrFI RCCGGY 1 cut(s) 1079
BsrI ACTGG 4 cut(s) 141, 394, 447, 636
BssAI RCCGGY 1 cut(s) 1079
BssECI CCNNGG 3 cut(s) 42, 180, 611
BssMI GATC 4 cut(s) 13, 736, 878, 1090
BssNI GRCGYC 1 cut(s) 978
BssT1I CCWWGG 2 cut(s) 42, 180
Bst2UI CCWGG 1 cut(s) 495
Bst4CI ACNGT 2 cut(s) 840, 1037
Bst6I CTCTTC 1 cut(s) 53
BstACI GRCGYC 1 cut(s) 978
BstBI TTCGAA 1 cut(s) 1029
BstC8I GCNNGC 6 cut(s) 77, 177, 311, 397, 414, 1014
BstDEI CTNAG 5 cut(s) 99, 222, 531, 929, 1123
BstDSI CCRYGG 1 cut(s) 611
BstF5I GGATG 5 cut(s) 427, 503, 589, 609, 820
BstFNI CGCG 2 cut(s) 70, 166
BstH2I RGCGCY 1 cut(s) 24
BstHHI GCGC 1 cut(s) 23
BstKTI GATC 4 cut(s) 16, 739, 881, 1093
BstMAI GTCTC 4 cut(s) 95, 440, 537, 917
BstMBI GATC 4 cut(s) 13, 736, 878, 1090
BstMWI GCNNNNNNNGC 6 cut(s) 76, 172, 344, 353, 374, 1009
BstNI CCWGG 1 cut(s) 495
BstNSI RCATGY 3 cut(s) 31, 416, 1016
BstPAI GACNNNNGTC 1 cut(s) 906
BstSCI CCNGG 1 cut(s) 493
BstSFI CTRYAG 3 cut(s) 480, 965, 998
BstSLI GKGCMC 1 cut(s) 177
BstUI CGCG 2 cut(s) 70, 166
BstV1I GCAGC 5 cut(s) 334, 355, 951, 972, 1012
BstV2I GAAGAC 3 cut(s) 71, 429, 468
BstXI CCANNNNNNTGG 1 cut(s) 643
BsuI GTATCC 1 cut(s) 618
BsuRI GGCC 5 cut(s) 220, 377, 419, 943, 1083
BtgI CCRYGG 1 cut(s) 611
BtsCI GGATG 5 cut(s) 427, 503, 589, 609, 820
BtsI GCAGTG 3 cut(s) 333, 489, 940
BtsIMutI CAGTG 5 cut(s) 333, 440, 489, 643, 940
Cac8I GCNNGC 6 cut(s) 77, 177, 311, 397, 414, 1014
CfoI GCGC 1 cut(s) 23
Cfr10I RCCGGY 1 cut(s) 1079
Cfr13I GGNCC 2 cut(s) 218, 625
CseI GACGC 2 cut(s) 76, 986
Csp6I GTAC 4 cut(s) 324, 387, 958, 1099
CspCI CAANNNNNGTGG 2 cut(s) 322, 357
CviAII CATG 7 cut(s) 28, 264, 379, 413, 919, 1006, 1013
CviQI GTAC 4 cut(s) 324, 387, 958, 1099
DdeI CTNAG 5 cut(s) 99, 222, 531, 929, 1123
DpnI GATC 4 cut(s) 15, 738, 880, 1092
DpnII GATC 4 cut(s) 13, 736, 878, 1090
EaeI YGGCCR 2 cut(s) 417, 1081
Eam1104I CTCTTC 1 cut(s) 53
EarI CTCTTC 1 cut(s) 53
EciI GGCGGA 1 cut(s) 768
Eco130I CCWWGG 2 cut(s) 42, 180
Eco47I GGWCC 1 cut(s) 625
Eco57I CTGAAG 2 cut(s) 438, 834
Eco88I CYCGRG 1 cut(s) 989
EcoO109I RGGNCCY 1 cut(s) 218
EcoRII CCWGG 1 cut(s) 493
EcoT14I CCWWGG 2 cut(s) 42, 180
ErhI CCWWGG 2 cut(s) 42, 180
Esp3I CGTCTC 1 cut(s) 537
FaeI CATG 7 cut(s) 31, 267, 382, 416, 922, 1009, 1016
FaqI GGGAC 1 cut(s) 611
FatI CATG 7 cut(s) 27, 263, 378, 412, 918, 1005, 1012
FauI CCCGC 2 cut(s) 184, 417
FbaI TGATCA 2 cut(s) 13, 1090
FblI GTMKAC 1 cut(s) 617
Fnu4HI GCNGC 6 cut(s) 348, 369, 417, 965, 986, 1001
FokI GGATG 5 cut(s) 414, 510, 596, 616, 827
Fsp4HI GCNGC 6 cut(s) 348, 369, 417, 965, 986, 1001
FspBI CTAG 1 cut(s) 107
GlaI GCGC 1 cut(s) 22
GluI GCNGC 6 cut(s) 348, 369, 417, 965, 986, 1001
GsuI CTGGAG 2 cut(s) 464, 477
HaeII RGCGCY 1 cut(s) 24
HaeIII GGCC 5 cut(s) 220, 377, 419, 943, 1083
HapII CCGG 3 cut(s) 719, 1080, 1161
HgaI GACGC 2 cut(s) 76, 986
HhaI GCGC 1 cut(s) 23
Hin1I GRCGYC 1 cut(s) 978
Hin1II CATG 7 cut(s) 31, 267, 382, 416, 922, 1009, 1016
Hin6I GCGC 1 cut(s) 21
HinP1I GCGC 1 cut(s) 21
HincII GTYRAC 1 cut(s) 698
HindII GTYRAC 1 cut(s) 698
HindIII AAGCTT 1 cut(s) 557
HinfI GANTC 8 cut(s) 47, 140, 286, 551, 596, 925, 994, 1137
HpaII CCGG 3 cut(s) 719, 1080, 1161
HphI GGTGA 1 cut(s) 599
Hpy166II GTNNAC 2 cut(s) 618, 698
Hpy188I TCNGA 5 cut(s) 532, 781, 853, 883, 1120
Hpy188III TCNNGA 6 cut(s) 290, 876, 974, 991, 1048, 1161
Hpy8I GTNNAC 2 cut(s) 618, 698
Hpy99I CGWCG 1 cut(s) 800
HpyAV CCTTC 4 cut(s) 367, 752, 858, 1127
HpyCH4III ACNGT 2 cut(s) 840, 1037
HpyCH4IV ACGT 2 cut(s) 232, 903
HpyCH4V TGCA 7 cut(s) 230, 237, 461, 482, 870, 967, 1000
HpyF10VI GCNNNNNNNGC 6 cut(s) 76, 172, 344, 353, 374, 1009
HpyF3I CTNAG 5 cut(s) 99, 222, 531, 929, 1123
HpySE526I ACGT 2 cut(s) 232, 903
Hsp92I GRCGYC 1 cut(s) 978
Hsp92II CATG 7 cut(s) 31, 267, 382, 416, 922, 1009, 1016
HspAI GCGC 1 cut(s) 21
Kpn2I TCCGGA 1 cut(s) 1160
Ksp22I TGATCA 2 cut(s) 13, 1090
Kzo9I GATC 4 cut(s) 13, 736, 878, 1090
LmnI GCTCC 5 cut(s) 5, 72, 292, 883, 1009
Lsp1109I GCAGC 5 cut(s) 334, 355, 951, 972, 1012
LweI GCATC 3 cut(s) 334, 488, 834
MaeI CTAG 1 cut(s) 107
MaeII ACGT 2 cut(s) 232, 903
MaeIII GTNAC 1 cut(s) 1172
MalI GATC 4 cut(s) 15, 738, 880, 1092
MboI GATC 4 cut(s) 13, 736, 878, 1090
MboII GAAGA 8 cut(s) 42, 70, 76, 202, 429, 444, 468, 677
MhlI GDGCHC 2 cut(s) 177, 397
MluCI AATT 5 cut(s) 238, 421, 742, 871, 949
MluI ACGCGT 1 cut(s) 164
MlyI GAGTC 2 cut(s) 919, 1003
MroI TCCGGA 1 cut(s) 1160
MseI TTAA 3 cut(s) 147, 567, 648
MspA1I CMGCKG 1 cut(s) 964
MspI CCGG 3 cut(s) 719, 1080, 1161
MspR9I CCNGG 1 cut(s) 495
Mva1269I GAATGC 1 cut(s) 232
MvaI CCWGG 1 cut(s) 495
MvnI CGCG 2 cut(s) 70, 166
MwoI GCNNNNNNNGC 6 cut(s) 76, 172, 344, 353, 374, 1009
NdeII GATC 4 cut(s) 13, 736, 878, 1090
NlaIII CATG 7 cut(s) 31, 267, 382, 416, 922, 1009, 1016
NlaIV GGNNCC 2 cut(s) 294, 627
NmeAIII GCCGAG 1 cut(s) 307
NspI RCATGY 3 cut(s) 31, 416, 1016
NspV TTCGAA 1 cut(s) 1029
PaeI GCATGC 2 cut(s) 416, 1016
PciI ACATGT 1 cut(s) 27
PctI GAATGC 1 cut(s) 232
PfeI GAWTC 6 cut(s) 47, 140, 286, 551, 596, 1137
PfoI TCCNGGA 1 cut(s) 493
PkrI GCNGC 6 cut(s) 349, 370, 418, 966, 987, 1002
PleI GAGTC 2 cut(s) 919, 1002
PpsI GAGTC 2 cut(s) 919, 1002
PscI ACATGT 1 cut(s) 27
PshAI GACNNNNGTC 1 cut(s) 906
Psp6I CCWGG 1 cut(s) 493
PspGI CCWGG 1 cut(s) 493
PspN4I GGNNCC 2 cut(s) 294, 627
PspPI GGNCC 2 cut(s) 218, 625
PsrI GAACNNNNNNTAC 2 cut(s) 1016, 1048
PstI CTGCAG 3 cut(s) 484, 969, 1002
PvuII CAGCTG 1 cut(s) 964
RsaI GTAC 4 cut(s) 325, 388, 959, 1100
RsaNI GTAC 4 cut(s) 324, 387, 958, 1099
SaqAI TTAA 3 cut(s) 147, 567, 648
SatI GCNGC 6 cut(s) 348, 369, 417, 965, 986, 1001
Sau3AI GATC 4 cut(s) 13, 736, 878, 1090
Sau96I GGNCC 2 cut(s) 218, 625
SchI GAGTC 2 cut(s) 919, 1003
ScrFI CCNGG 1 cut(s) 495
SduI GDGCHC 2 cut(s) 177, 397
SfaNI GCATC 3 cut(s) 334, 488, 834
SfcI CTRYAG 3 cut(s) 480, 965, 998
SfuI TTCGAA 1 cut(s) 1029
SinI GGWCC 1 cut(s) 625
SmlI CTYRAG 2 cut(s) 520, 630
SmoI CTYRAG 2 cut(s) 520, 630
SphI GCATGC 2 cut(s) 416, 1016
Sse9I AATT 5 cut(s) 238, 421, 742, 871, 949
SsiI CCGC 6 cut(s) 70, 177, 410, 416, 623, 753
SspMI CTAG 1 cut(s) 107
StyD4I CCNGG 1 cut(s) 493
StyI CCWWGG 2 cut(s) 42, 180
TaaI ACNGT 2 cut(s) 840, 1037
TaiI ACGT 2 cut(s) 235, 906
TaqI TCGA 3 cut(s) 188, 1029, 1184
TasI AATT 5 cut(s) 238, 421, 742, 871, 949
TauI GCSGC 1 cut(s) 419
TfiI GAWTC 6 cut(s) 47, 140, 286, 551, 596, 1137
Tru1I TTAA 3 cut(s) 147, 567, 648
Tru9I TTAA 3 cut(s) 147, 567, 648
TscAI CASTG 5 cut(s) 340, 447, 489, 643, 940
TseI GCWGC 5 cut(s) 347, 368, 964, 985, 1000
TspDTI ATGAA 2 cut(s) 218, 849
TspGWI ACGGA 1 cut(s) 600
TspRI CASTG 5 cut(s) 340, 447, 489, 643, 940
VpaK11BI GGWCC 1 cut(s) 625
XapI RAATTY 1 cut(s) 949
XceI RCATGY 3 cut(s) 31, 416, 1016
XmiI GTMKAC 1 cut(s) 617
XspI CTAG 1 cut(s) 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.