pycom07g20590

Dehydration-responsive element-binding protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
22622593 .. 22623789
1197 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g20590.1

Sequence Viewer

Length: 1197 bp
ATGGGAGCCTATGATCAAGGTGTTAACATGCCGTATCTGCCCTTGGATTCTTCAAGGAAGAGGAAGACGCGGAGCAGACGAGATGGGAACTCGGTCGCTGATACGCTGGAGAAGTGGAAGGAGTATAACAAACAACTCGAATCGGCTAATGAGGAGGGGAAAAAGCGTAAAGTGCCGGCCAAGGGGTCCAAGAAAGGCTGTATGAAAGGCAAGGGAGGGCCCGAGAATGCACGTTGCAATTACAGGGGAGTGAGGCAAAGGACTTGGGGCAAGTGGGTTGCCGAAATTCGGGAGCCGGACAGGGGAAGTAGGCTTTGGTTAGGTACTTTTCCCACTGCCGTTGAGGCTGCCCTTGCCTATGATGAGGCTGCAAAGGCCATGTATGGAGATGGAGCTCGCCTCAACCTCCCGCACGGGGTCAATAATCATCCATCGTCTTCACAGGAGACTTCTTCGGTTGCAACACCATCAGGGTCTTCTGCAGCGGCAACTCCAGGATGCTCTACTTCCACTTCAACCTCGAGTCACTCTGAGGTGTGTGGAGACGAGAATTCCAAGCTTTTCCTTAATGTGAAAAAGGAGGATGGTGAGGGCGAATCAAGGATGTATCCGTGGTCCGGTGCGGTCCCTCAAGCCAGTGGTATGGTGAAGCCAGAAGTCAGTGAGGACCTTGACATGGATTATCTTCGCAATAATCAACATCAACCTGTCGTAGCAAAACCGGAACGCGGAGTTGAGGATCATAATCCGAATGGCGGAGATGGTTTTGTTGGGGATTGTTCTGAGAACTTCACAATGTGCGAGTTGTTTGATATGGATGAGATGTTTGATGCAAATGAACTATTGATGCCTTCAGATGATACTTCCTTTTGCAATTCGGGACCAGAGCAAGCGTCGAGACCTGATGTTGGTCAGCCGGGCATGGAGACTCTCAGCAGCGAAGGGCCATCAAATCTGTCGTACCAGCTGCAGTTTCCAGACGCCAAGCTGCTCGGGAGTCTGCCGCACATGGAGCAGGCCCCTTTGGACTACGAATACGGTTTTGATTTCATGAAGCAAGAGGAGGGGAGTAATCATACCAGCCAAAATGATCAAGGGTACTTCAATCTAGGACCGTCCGACTTAGGTTTGGGGGGATTCACAGAAGGTACAATGCAATCCGGAGACGTAGGTTACAACTATTCCATGGAAATCTGA

Protein Analysis

399

Amino Acids

43.45

Weight (kDa)

4.84

Isoelectric Point (pI)

44.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AP2 PF00847 80 - 129 1.2e-14 AP2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014804)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 70, 729
AccIII TCCGGA 1 cut(s) 1160
AciI CCGC 7 cut(s) 70, 410, 485, 623, 729, 756, 1004
AclWI GGATC 1 cut(s) 747
AcoI YGGCCR 1 cut(s) 177
AcsI RAATTY 2 cut(s) 285, 550
AcuI CTGAAG 1 cut(s) 837
AcyI GRCGYC 1 cut(s) 981
AdeI CACNNNGTG 1 cut(s) 798
AfaI GTAC 4 cut(s) 325, 962, 1100, 1150
AfiI CCNNNNNNNGG 9 cut(s) 182, 288, 302, 415, 617, 676, 728, 755, 908
AgsI TTSAA 3 cut(s) 54, 516, 1105
AjnI CCWGG 1 cut(s) 493
AjuI GAANNNNNNNTTGG 2 cut(s) 298, 330
AluBI AGCT 4 cut(s) 395, 559, 967, 988
AluI AGCT 4 cut(s) 395, 559, 967, 988
Alw21I GWGCWC 1 cut(s) 397
Alw26I GTCTC 5 cut(s) 440, 537, 892, 920, 1158
AlwI GGATC 1 cut(s) 747
Ama87I CYCGRG 3 cut(s) 221, 520, 992
Aor13HI TCCGGA 1 cut(s) 1160
AoxI GGCC 5 cut(s) 177, 218, 375, 944, 1017
ApaI GGGCCC 1 cut(s) 222
ApeKI GCWGC 6 cut(s) 347, 368, 482, 936, 967, 988
ApoI RAATTY 2 cut(s) 285, 550
AsuC2I CCSGG 1 cut(s) 918
AsuHPI GGTGA 2 cut(s) 599, 658
AvaI CYCGRG 3 cut(s) 221, 520, 992
AvaII GGWCC 6 cut(s) 186, 615, 625, 667, 881, 1112
BaeGI GKGCMC 1 cut(s) 222
BanII GRGCYC 2 cut(s) 222, 397
BbsI GAAGAC 3 cut(s) 71, 429, 468
Bbv12I GWGCWC 1 cut(s) 397
BbvI GCAGC 6 cut(s) 334, 355, 494, 948, 954, 975
BccI CCATC 7 cut(s) 77, 383, 439, 475, 578, 755, 955
BceAI ACGGC 2 cut(s) 16, 323
BciT130I CCWGG 1 cut(s) 495
BciVI GTATCC 1 cut(s) 618
BclI TGATCA 2 cut(s) 13, 1090
BcnI CCSGG 1 cut(s) 918
BcoDI GTCTC 5 cut(s) 440, 537, 892, 920, 1158
BfaI CTAG 1 cut(s) 1109
BfmI CTRYAG 2 cut(s) 480, 968
BfuI GTATCC 1 cut(s) 618
BglI GCCNNNNNGGC 1 cut(s) 344
BisI GCNGC 8 cut(s) 348, 369, 483, 486, 937, 968, 989, 1004
BlsI GCNGC 8 cut(s) 349, 370, 484, 487, 938, 969, 990, 1005
Bme1390I CCNGG 2 cut(s) 495, 918
Bme18I GGWCC 6 cut(s) 186, 615, 625, 667, 881, 1112
BmeT110I CYCGRG 3 cut(s) 221, 520, 992
BmiI GGNNCC 7 cut(s) 7, 187, 220, 294, 627, 882, 1020
BmrFI CCNGG 2 cut(s) 495, 918
BmsI GCATC 3 cut(s) 488, 820, 837
BpiI GAAGAC 3 cut(s) 71, 429, 468
BplI GAGNNNNNCTC 2 cut(s) 384, 416
BpmI CTGGAG 2 cut(s) 128, 477
BpuEI CTTGAG 1 cut(s) 615
BpuMI CCSGG 1 cut(s) 918
BsaBI GATNNNNATC 1 cut(s) 744
BsaHI GRCGYC 1 cut(s) 981
BsaI GGTCTC 1 cut(s) 892
BsaJI CCNNGG 4 cut(s) 42, 180, 611, 1185
BsaWI WCCGGW 3 cut(s) 617, 721, 1160
Bsc4I CCNNNNNNNGG 9 cut(s) 182, 288, 302, 415, 617, 676, 728, 755, 908
Bse118I RCCGGY 1 cut(s) 175
Bse1I ACTGG 1 cut(s) 636
Bse8I GATNNNNATC 1 cut(s) 744
BseAI TCCGGA 1 cut(s) 1160
BseBI CCWGG 1 cut(s) 495
BseDI CCNNGG 4 cut(s) 42, 180, 611, 1185
BseGI GGATG 5 cut(s) 427, 503, 589, 609, 823
BseJI GATNNNNATC 1 cut(s) 744
BseLI CCNNNNNNNGG 9 cut(s) 182, 288, 302, 415, 617, 676, 728, 755, 908
BseMII CTCAG 3 cut(s) 522, 774, 946
BseNI ACTGG 1 cut(s) 636
BseRI GAGGAG 2 cut(s) 167, 1076
BseSI GKGCMC 1 cut(s) 222
BseXI GCAGC 6 cut(s) 334, 355, 494, 948, 954, 975
Bsh1236I CGCG 2 cut(s) 70, 729
Bsh1285I CGRYCG 1 cut(s) 96
BshFI GGCC 5 cut(s) 179, 220, 377, 946, 1019
BsiEI CGRYCG 1 cut(s) 96
BsiHKAI GWGCWC 1 cut(s) 397
BsiHKCI CYCGRG 3 cut(s) 221, 520, 992
BsiSI CCGG 6 cut(s) 176, 296, 618, 722, 917, 1161
BslFI GGGAC 2 cut(s) 611, 894
BslI CCNNNNNNNGG 9 cut(s) 182, 288, 302, 415, 617, 676, 728, 755, 908
BsmAI GTCTC 5 cut(s) 440, 537, 892, 920, 1158
BsmBI CGTCTC 2 cut(s) 537, 1158
BsmFI GGGAC 2 cut(s) 611, 894
BsmI GAATGC 1 cut(s) 232
BsnI GGCC 5 cut(s) 179, 220, 377, 946, 1019
Bso31I GGTCTC 1 cut(s) 892
BsoBI CYCGRG 3 cut(s) 221, 520, 992
Bsp120I GGGCCC 1 cut(s) 218
Bsp1286I GDGCHC 2 cut(s) 222, 397
Bsp13I TCCGGA 1 cut(s) 1160
Bsp143I GATC 3 cut(s) 13, 739, 1090
Bsp19I CCATGG 1 cut(s) 1185
BspACI CCGC 7 cut(s) 70, 410, 485, 623, 729, 756, 1004
BspANI GGCC 5 cut(s) 179, 220, 377, 946, 1019
BspCNI CTCAG 3 cut(s) 523, 775, 945
BspEI TCCGGA 1 cut(s) 1160
BspFNI CGCG 2 cut(s) 70, 729
BspHI TCATGA 1 cut(s) 1050
BspLI GGNNCC 7 cut(s) 7, 187, 220, 294, 627, 882, 1020
BspMAI CTGCAG 2 cut(s) 484, 972
BspPI GGATC 1 cut(s) 747
BspTNI GGTCTC 1 cut(s) 892
BsrFI RCCGGY 1 cut(s) 175
BsrI ACTGG 1 cut(s) 636
BssAI RCCGGY 1 cut(s) 175
BssECI CCNNGG 4 cut(s) 42, 180, 611, 1185
BssMI GATC 3 cut(s) 13, 739, 1090
BssNI GRCGYC 1 cut(s) 981
BssT1I CCWWGG 3 cut(s) 42, 180, 1185
Bst2UI CCWGG 1 cut(s) 495
Bst4CI ACNGT 2 cut(s) 1040, 1116
Bst6I CTCTTC 1 cut(s) 53
BstACI GRCGYC 1 cut(s) 981
BstC8I GCNNGC 4 cut(s) 177, 397, 891, 1017
BstDEI CTNAG 4 cut(s) 531, 783, 932, 1123
BstDSI CCRYGG 2 cut(s) 611, 1185
BstF5I GGATG 5 cut(s) 427, 503, 589, 609, 823
BstFNI CGCG 2 cut(s) 70, 729
BstKTI GATC 3 cut(s) 16, 742, 1093
BstMAI GTCTC 5 cut(s) 440, 537, 892, 920, 1158
BstMBI GATC 3 cut(s) 13, 739, 1090
BstMCI CGRYCG 1 cut(s) 96
BstMWI GCNNNNNNNGC 6 cut(s) 37, 172, 344, 353, 374, 1012
BstNI CCWGG 1 cut(s) 495
BstNSI RCATGY 1 cut(s) 31
BstSCI CCNGG 2 cut(s) 493, 916
BstSFI CTRYAG 2 cut(s) 480, 968
BstSLI GKGCMC 1 cut(s) 222
BstUI CGCG 2 cut(s) 70, 729
BstV1I GCAGC 6 cut(s) 334, 355, 494, 948, 954, 975
BstV2I GAAGAC 3 cut(s) 71, 429, 468
BstXI CCANNNNNNTGG 1 cut(s) 643
BsuI GTATCC 1 cut(s) 618
BsuRI GGCC 5 cut(s) 179, 220, 377, 946, 1019
BtgI CCRYGG 2 cut(s) 611, 1185
BtsCI GGATG 5 cut(s) 427, 503, 589, 609, 823
BtsI GCAGTG 1 cut(s) 333
BtsIMutI CAGTG 3 cut(s) 333, 643, 667
Cac8I GCNNGC 4 cut(s) 177, 397, 891, 1017
CciI TCATGA 1 cut(s) 1050
Cfr10I RCCGGY 1 cut(s) 175
CseI GACGC 3 cut(s) 76, 882, 989
Csp6I GTAC 4 cut(s) 324, 961, 1099, 1149
CspCI CAANNNNNGTGG 2 cut(s) 322, 357
CviAII CATG 7 cut(s) 28, 379, 676, 922, 1009, 1051, 1186
CviQI GTAC 4 cut(s) 324, 961, 1099, 1149
DdeI CTNAG 4 cut(s) 531, 783, 932, 1123
DpnI GATC 3 cut(s) 15, 741, 1092
DpnII GATC 3 cut(s) 13, 739, 1090
DraIII CACNNNGTG 1 cut(s) 798
EaeI YGGCCR 1 cut(s) 177
Eam1104I CTCTTC 1 cut(s) 53
EarI CTCTTC 1 cut(s) 53
EciI GGCGGA 1 cut(s) 771
Ecl136II GAGCTC 1 cut(s) 395
Eco130I CCWWGG 3 cut(s) 42, 180, 1185
Eco24I GRGCYC 2 cut(s) 222, 397
Eco31I GGTCTC 1 cut(s) 892
Eco47I GGWCC 6 cut(s) 186, 615, 625, 667, 881, 1112
Eco53kI GAGCTC 1 cut(s) 395
Eco57I CTGAAG 1 cut(s) 837
Eco88I CYCGRG 3 cut(s) 221, 520, 992
EcoICRI GAGCTC 1 cut(s) 395
EcoO109I RGGNCCY 3 cut(s) 218, 667, 1018
EcoRI GAATTC 1 cut(s) 550
EcoRII CCWGG 1 cut(s) 493
EcoT14I CCWWGG 3 cut(s) 42, 180, 1185
EcoT38I GRGCYC 2 cut(s) 222, 397
ErhI CCWWGG 3 cut(s) 42, 180, 1185
Esp3I CGTCTC 2 cut(s) 537, 1158
FaeI CATG 7 cut(s) 31, 382, 679, 925, 1012, 1054, 1189
FaqI GGGAC 2 cut(s) 611, 894
FatI CATG 7 cut(s) 27, 378, 675, 921, 1008, 1050, 1185
FauI CCCGC 1 cut(s) 417
FbaI TGATCA 2 cut(s) 13, 1090
Fnu4HI GCNGC 8 cut(s) 348, 369, 483, 486, 937, 968, 989, 1004
FokI GGATG 5 cut(s) 414, 510, 596, 616, 830
FriOI GRGCYC 2 cut(s) 222, 397
Fsp4HI GCNGC 8 cut(s) 348, 369, 483, 486, 937, 968, 989, 1004
FspBI CTAG 1 cut(s) 1109
GluI GCNGC 8 cut(s) 348, 369, 483, 486, 937, 968, 989, 1004
GsuI CTGGAG 2 cut(s) 128, 477
HaeIII GGCC 5 cut(s) 179, 220, 377, 946, 1019
HapII CCGG 6 cut(s) 176, 296, 618, 722, 917, 1161
HgaI GACGC 3 cut(s) 76, 882, 989
Hin1I GRCGYC 1 cut(s) 981
Hin1II CATG 7 cut(s) 31, 382, 679, 925, 1012, 1054, 1189
HincII GTYRAC 1 cut(s) 25
HindII GTYRAC 1 cut(s) 25
HindIII AAGCTT 1 cut(s) 557
HinfI GANTC 7 cut(s) 47, 140, 523, 596, 928, 997, 1137
HpaI GTTAAC 1 cut(s) 25
HpaII CCGG 6 cut(s) 176, 296, 618, 722, 917, 1161
HphI GGTGA 2 cut(s) 599, 658
Hpy166II GTNNAC 1 cut(s) 25
Hpy188I TCNGA 6 cut(s) 532, 750, 784, 856, 1120, 1196
Hpy188III TCNNGA 7 cut(s) 290, 879, 897, 977, 994, 1051, 1161
Hpy8I GTNNAC 1 cut(s) 25
Hpy99I CGWCG 1 cut(s) 898
HpyAV CCTTC 4 cut(s) 112, 861, 935, 1139
HpyCH4III ACNGT 2 cut(s) 1040, 1116
HpyCH4IV ACGT 2 cut(s) 232, 1167
HpyCH4V TGCA 9 cut(s) 230, 237, 371, 461, 482, 833, 873, 970, 1156
HpyF10VI GCNNNNNNNGC 6 cut(s) 37, 172, 344, 353, 374, 1012
HpyF3I CTNAG 4 cut(s) 531, 783, 932, 1123
HpySE526I ACGT 2 cut(s) 232, 1167
Hsp92I GRCGYC 1 cut(s) 981
Hsp92II CATG 7 cut(s) 31, 382, 679, 925, 1012, 1054, 1189
Kpn2I TCCGGA 1 cut(s) 1160
KroI GCCGGC 1 cut(s) 175
KroNI GCCGGC 1 cut(s) 177
Ksp22I TGATCA 2 cut(s) 13, 1090
KspAI GTTAAC 1 cut(s) 25
Kzo9I GATC 3 cut(s) 13, 739, 1090
LmnI GCTCC 5 cut(s) 5, 72, 292, 392, 1012
Lsp1109I GCAGC 6 cut(s) 334, 355, 494, 948, 954, 975
LweI GCATC 3 cut(s) 488, 820, 837
MaeI CTAG 1 cut(s) 1109
MaeII ACGT 2 cut(s) 232, 1167
MaeIII GTNAC 2 cut(s) 524, 1172
MalI GATC 3 cut(s) 15, 741, 1092
MboI GATC 3 cut(s) 13, 739, 1090
MboII GAAGA 7 cut(s) 42, 70, 76, 429, 444, 468, 677
MhlI GDGCHC 2 cut(s) 222, 397
MluCI AATT 4 cut(s) 238, 285, 550, 874
MlyI GAGTC 3 cut(s) 532, 922, 1006
MmeI TCCRAC 1 cut(s) 1143
MroI TCCGGA 1 cut(s) 1160
MroNI GCCGGC 1 cut(s) 175
MseI TTAA 2 cut(s) 24, 567
MspA1I CMGCKG 2 cut(s) 485, 967
MspI CCGG 6 cut(s) 176, 296, 618, 722, 917, 1161
MspR9I CCNGG 2 cut(s) 495, 918
Mva1269I GAATGC 1 cut(s) 232
MvaI CCWGG 1 cut(s) 495
MvnI CGCG 2 cut(s) 70, 729
MwoI GCNNNNNNNGC 6 cut(s) 37, 172, 344, 353, 374, 1012
NaeI GCCGGC 1 cut(s) 177
NciI CCSGG 1 cut(s) 918
NcoI CCATGG 1 cut(s) 1185
NdeII GATC 3 cut(s) 13, 739, 1090
NgoMIV GCCGGC 1 cut(s) 175
NlaIII CATG 7 cut(s) 31, 382, 679, 925, 1012, 1054, 1189
NlaIV GGNNCC 7 cut(s) 7, 187, 220, 294, 627, 882, 1020
NmuCI GTSAC 1 cut(s) 524
NspI RCATGY 1 cut(s) 31
PaeR7I CTCGAG 1 cut(s) 520
PagI TCATGA 1 cut(s) 1050
PctI GAATGC 1 cut(s) 232
PdiI GCCGGC 1 cut(s) 177
PfeI GAWTC 4 cut(s) 47, 140, 596, 1137
PfoI TCCNGGA 1 cut(s) 493
PkrI GCNGC 8 cut(s) 349, 370, 484, 487, 938, 969, 990, 1005
PleI GAGTC 3 cut(s) 531, 922, 1005
PpsI GAGTC 3 cut(s) 531, 922, 1005
PpuMI RGGWCCY 1 cut(s) 667
Psp124BI GAGCTC 1 cut(s) 397
Psp5II RGGWCCY 1 cut(s) 667
Psp6I CCWGG 1 cut(s) 493
PspGI CCWGG 1 cut(s) 493
PspN4I GGNNCC 7 cut(s) 7, 187, 220, 294, 627, 882, 1020
PspOMI GGGCCC 1 cut(s) 218
PspPPI RGGWCCY 1 cut(s) 667
PspXI VCTCGAGB 1 cut(s) 520
PstI CTGCAG 2 cut(s) 484, 972
PvuII CAGCTG 1 cut(s) 967
RsaI GTAC 4 cut(s) 325, 962, 1100, 1150
RsaNI GTAC 4 cut(s) 324, 961, 1099, 1149
SacI GAGCTC 1 cut(s) 397
SaqAI TTAA 2 cut(s) 24, 567
SatI GCNGC 8 cut(s) 348, 369, 483, 486, 937, 968, 989, 1004
Sau3AI GATC 3 cut(s) 13, 739, 1090
SchI GAGTC 3 cut(s) 532, 922, 1006
ScrFI CCNGG 2 cut(s) 495, 918
SduI GDGCHC 2 cut(s) 222, 397
SfaNI GCATC 3 cut(s) 488, 820, 837
SfcI CTRYAG 2 cut(s) 480, 968
Sfr274I CTCGAG 1 cut(s) 520
SinI GGWCC 6 cut(s) 186, 615, 625, 667, 881, 1112
SlaI CTCGAG 1 cut(s) 520
SmlI CTYRAG 2 cut(s) 520, 630
SmoI CTYRAG 2 cut(s) 520, 630
Sse9I AATT 4 cut(s) 238, 285, 550, 874
SsiI CCGC 7 cut(s) 70, 410, 485, 623, 729, 756, 1004
SspMI CTAG 1 cut(s) 1109
SstI GAGCTC 1 cut(s) 397
StyD4I CCNGG 2 cut(s) 493, 916
StyI CCWWGG 3 cut(s) 42, 180, 1185
TaaI ACNGT 2 cut(s) 1040, 1116
TaiI ACGT 2 cut(s) 235, 1170
TaqI TCGA 3 cut(s) 138, 521, 896
TaqII GACCGA 1 cut(s) 82
TasI AATT 4 cut(s) 238, 285, 550, 874
TauI GCSGC 2 cut(s) 488, 1006
TfiI GAWTC 4 cut(s) 47, 140, 596, 1137
Tru1I TTAA 2 cut(s) 24, 567
Tru9I TTAA 2 cut(s) 24, 567
TscAI CASTG 3 cut(s) 340, 643, 667
TseFI GTSAC 1 cut(s) 524
TseI GCWGC 6 cut(s) 347, 368, 482, 936, 967, 988
Tsp45I GTSAC 1 cut(s) 524
TspDTI ATGAA 4 cut(s) 218, 852, 1039, 1067
TspGWI ACGGA 1 cut(s) 600
TspRI CASTG 3 cut(s) 340, 643, 667
VpaK11BI GGWCC 6 cut(s) 186, 615, 625, 667, 881, 1112
XapI RAATTY 2 cut(s) 285, 550
XceI RCATGY 1 cut(s) 31
XhoI CTCGAG 1 cut(s) 520
XspI CTAG 1 cut(s) 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.