MD02G1021200.v1.1

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
1496528 .. 1500542
4015 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1021200.v1.1.491

Sequence Viewer

Length: 1461 bp
ATGATGGCAGCGGTTACTAGGATGGAGTCCGCGTTGCTTGGAATTATTCTTACCTCTTTTGTCGCGTTGAGCTTCTTGATGAATGGGAATGCAGCGGGAATCACGAGTACTTTCATCCGATCTGAGTATCCATCGGTTGATATACCTCTGGACCATAAAGTATTTGCGGTGCCAAAGGGTTACAATGCTCCACAACAAGTGCATATCACCCAGGGTGACTATGATGGAAAGGCTGTAATCATCTCATGGGTTACCGCTGACAAACCAGGGGATGGTAAAGTGCAGTATGGTACCTCAGAGAAAAAATACAAGTTTTCTGCTAAGGGGGTCATGACAAACTACACCTTCTACCAGTATAAGTCTGGCTACATCCATCACTGTCTTGTTGATGGCCTAGAGTATGACACAAAGTACTATTACAAAATTGGAAATGGTGATTCATCTCGAGAATTTTGGTTTACAACGCCTCCAAAGATCGATCCAAATTCTCATTACACATTTGGGATCATAGGTGATTTGGGTCAGACATTTAACTCTCTCTCAACTCTTGAGCACTATATGAAGAGTGCAGGACAGGCTGTTTTATTCGTCGGAGATCTTAGCTATGCTGATAGATATCAGTATAATGACGTAGGTTTACGGTGGGACACATGGGCTCGATTCGTCGAGCAAAGTACTGCATATCAGTCATGGATGTGGTCTGCTGGCAATCATGAAATTGATTACATGCCTTATATGGGAGAAGTTACTCCGTTCAAGAACTATCTTCAGCGGTATGCTACTCCGTATTTGGCCTCTAGTAGTAGCAACCCTCTTTGGTATGCCATCAGACGCGCATCAGCTCACATAATCGTGTTGTCCAGTTACTCTCCATTTGTGAAGTACACGCCTCAATGGATGTGGCTAGCAGCAGAATTGCAAAGGGTTGATAGGAAAAAAACACCTTGGCTCATAGTCCTTATGCATGTTCCGATGTACAATAGTAATGAGGCTCATTACATGGAAGGTGAAAGCATGCGAGCAGTGTTTGAGAGTTGGTTCGTTCAATACAAAGTTGATGTGGTGTTTGCTGGCCACGTCCATGCTTATGAGAGATCGTATCGTTTCTCCAATATACAATACAACGTAACAAGTGGTTACCAGTACCCCGTACCAGACAAATCAGCTCCTGTGTACATAACTGTTGGAGATGGAGGGAATCAAGAAGGACTTGCTGGACCGTTTAGAGATCCACAACCAGATTATTCTGCATTCCGAGAAGCAAGCTACGGGCATTCCACGCTTGAGCTGATAAACAGGACACACGCACTCTACCATTGGAACCGCAATGACGATGGGAAGAAAACCGCCATGGATGCATTCGTGTTACACAACCAATACTGGGGTGCGAATCACGGGAGGCGAAAACTGGAGAAGCATAATGTTAGGAAGATAATGATGGACGAAAGTGCTACGTATTGA

Protein Analysis

487

Amino Acids

55.79

Weight (kDa)

7.32

Isoelectric Point (pI)

38.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pur_ac_phosph_N PF16656 64 - 155 5.5e-24 Purple acid Phosphatase, N-terminal domain
Metallophos PF00149 166 - 363 1.7e-22 Calcineurin-like phosphoesterase
Metallophos_C PF14008 389 - 447 4.1e-20 Iron/zinc purple acid phosphatase-like protein C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 290
AccB1I GGYRCC 2 cut(s) 169, 290
AccB7I CCANNNNNTGG 1 cut(s) 272
AccII CGCG 3 cut(s) 32, 65, 834
AciI CCGC 8 cut(s) 11, 30, 95, 167, 255, 772, 1324, 1347
AclWI GGATC 3 cut(s) 473, 512, 1223
AcoI YGGCCR 1 cut(s) 1072
AcsI RAATTY 2 cut(s) 449, 484
AcuI CTGAAG 1 cut(s) 752
AfaI GTAC 9 cut(s) 109, 292, 413, 676, 884, 977, 1145, 1152, 1175
AfiI CCNNNNNNNGG 3 cut(s) 272, 737, 1381
AgsI TTSAA 2 cut(s) 757, 1046
AjiI CACGTC 1 cut(s) 1078
AjnI CCWGG 2 cut(s) 210, 265
AluBI AGCT 6 cut(s) 72, 603, 842, 1166, 1266, 1288
AluI AGCT 6 cut(s) 72, 603, 842, 1166, 1266, 1288
Alw21I GWGCWC 1 cut(s) 555
AlwI GGATC 3 cut(s) 473, 512, 1223
AlwNI CAGNNNCTG 1 cut(s) 1169
Ama87I CYCGRG 1 cut(s) 444
AoxI GGCC 3 cut(s) 391, 792, 1072
ApeKI GCWGC 3 cut(s) 8, 92, 908
ApoI RAATTY 2 cut(s) 449, 484
Asp718I GGTACC 1 cut(s) 290
AspLEI GCGC 1 cut(s) 836
AspS9I GGNCC 2 cut(s) 151, 1217
AsuHPI GGTGA 5 cut(s) 199, 227, 446, 524, 1019
AsuNHI GCTAGC 1 cut(s) 904
AvaI CYCGRG 1 cut(s) 444
AvaII GGWCC 2 cut(s) 151, 1217
BalI TGGCCA 1 cut(s) 1074
BanI GGYRCC 2 cut(s) 169, 290
BanII GRGCYC 1 cut(s) 658
BauI CACGAG 1 cut(s) 103
Bbv12I GWGCWC 1 cut(s) 555
BbvI GCAGC 3 cut(s) 20, 104, 920
BciT130I CCWGG 2 cut(s) 212, 267
BciVI GTATCC 1 cut(s) 138
BfaI CTAG 4 cut(s) 18, 395, 798, 905
BfuI GTATCC 1 cut(s) 138
BglII AGATCT 1 cut(s) 595
BisI GCNGC 3 cut(s) 9, 93, 909
BlsI GCNGC 3 cut(s) 10, 94, 910
BmcAI AGTACT 3 cut(s) 109, 413, 676
Bme1390I CCNGG 2 cut(s) 212, 267
Bme18I GGWCC 2 cut(s) 151, 1217
BmeT110I CYCGRG 1 cut(s) 444
BmgBI CACGTC 1 cut(s) 1078
BmgT120I GGNCC 2 cut(s) 151, 1217
BmiI GGNNCC 3 cut(s) 171, 292, 1322
BmrFI CCNGG 2 cut(s) 212, 267
BmrI ACTGGG 1 cut(s) 1390
BmsI GCATC 2 cut(s) 845, 1345
BmtI GCTAGC 1 cut(s) 908
BmuI ACTGGG 1 cut(s) 1390
BpmI CTGGAG 1 cut(s) 1430
Bpu10I CCTNAGC 1 cut(s) 321
BpuEI CTTGAG 2 cut(s) 569, 1304
Bsa29I ATCGAT 1 cut(s) 477
BsaAI YACGTR 1 cut(s) 1455
BsaBI GATNNNNATC 1 cut(s) 615
BsaJI CCNNGG 5 cut(s) 210, 211, 266, 944, 1350
BsaXI ACNNNNNCTCC 4 cut(s) 17, 47, 451, 481
Bsc4I CCNNNNNNNGG 3 cut(s) 272, 737, 1381
Bse1I ACTGG 5 cut(s) 352, 861, 1141, 1385, 1413
Bse3DI GCAATG 1 cut(s) 1333
Bse8I GATNNNNATC 1 cut(s) 615
BseBI CCWGG 2 cut(s) 212, 267
BseCI ATCGAT 1 cut(s) 477
BseDI CCNNGG 5 cut(s) 210, 211, 266, 944, 1350
BseGI GGATG 7 cut(s) 27, 114, 277, 369, 699, 903, 1360
BseJI GATNNNNATC 1 cut(s) 615
BseLI CCNNNNNNNGG 3 cut(s) 272, 737, 1381
BseMI GCAATG 1 cut(s) 1333
BseMII CTCAG 2 cut(s) 114, 309
BseNI ACTGG 5 cut(s) 352, 861, 1141, 1385, 1413
BseXI GCAGC 3 cut(s) 20, 104, 920
BsgI GTGCAG 2 cut(s) 302, 588
Bsh1236I CGCG 3 cut(s) 32, 65, 834
BshFI GGCC 3 cut(s) 393, 794, 1074
BshNI GGYRCC 2 cut(s) 169, 290
BshVI ATCGAT 1 cut(s) 477
BsiHKAI GWGCWC 1 cut(s) 555
BsiHKCI CYCGRG 1 cut(s) 444
BslFI GGGAC 1 cut(s) 659
BslI CCNNNNNNNGG 3 cut(s) 272, 737, 1381
BsmFI GGGAC 1 cut(s) 659
BsmI GAATGC 4 cut(s) 94, 1250, 1273, 1358
BsnI GGCC 3 cut(s) 393, 794, 1074
BsoBI CYCGRG 1 cut(s) 444
Bsp1286I GDGCHC 2 cut(s) 555, 658
Bsp1407I TGTACA 2 cut(s) 975, 1173
Bsp143I GATC 7 cut(s) 119, 474, 478, 504, 595, 1094, 1228
Bsp19I CCATGG 1 cut(s) 1350
BspACI CCGC 8 cut(s) 11, 30, 95, 167, 255, 772, 1324, 1347
BspANI GGCC 3 cut(s) 393, 794, 1074
BspCNI CTCAG 2 cut(s) 115, 308
BspDI ATCGAT 1 cut(s) 477
BspFNI CGCG 3 cut(s) 32, 65, 834
BspHI TCATGA 2 cut(s) 330, 712
BspLI GGNNCC 3 cut(s) 171, 292, 1322
BspOI GCTAGC 1 cut(s) 908
BspPI GGATC 3 cut(s) 473, 512, 1223
BspT107I GGYRCC 2 cut(s) 169, 290
BsrDI GCAATG 1 cut(s) 1333
BsrGI TGTACA 2 cut(s) 975, 1173
BsrI ACTGG 5 cut(s) 352, 861, 1141, 1385, 1413
BssECI CCNNGG 5 cut(s) 210, 211, 266, 944, 1350
BssMI GATC 7 cut(s) 119, 474, 478, 504, 595, 1094, 1228
BssSI CACGAG 1 cut(s) 103
BssT1I CCWWGG 2 cut(s) 944, 1350
Bst2BI CACGAG 1 cut(s) 103
Bst2UI CCWGG 2 cut(s) 212, 267
Bst4CI ACNGT 4 cut(s) 380, 642, 1183, 1221
Bst6I CTCTTC 1 cut(s) 557
BstAUI TGTACA 2 cut(s) 975, 1173
BstBAI YACGTR 1 cut(s) 1455
BstC8I GCNNGC 6 cut(s) 706, 906, 1016, 1020, 1072, 1264
BstDEI CTNAG 4 cut(s) 123, 295, 321, 599
BstDSI CCRYGG 1 cut(s) 1350
BstEII GGTNACC 2 cut(s) 250, 1136
BstF5I GGATG 7 cut(s) 27, 114, 277, 369, 699, 903, 1360
BstFNI CGCG 3 cut(s) 32, 65, 834
BstHHI GCGC 1 cut(s) 836
BstKTI GATC 7 cut(s) 122, 477, 481, 507, 598, 1097, 1231
BstMBI GATC 7 cut(s) 119, 474, 478, 504, 595, 1094, 1228
BstMWI GCNNNNNNNGC 3 cut(s) 575, 1279, 1355
BstNI CCWGG 2 cut(s) 212, 267
BstNSI RCATGY 3 cut(s) 730, 968, 1018
BstPI GGTNACC 2 cut(s) 250, 1136
BstSCI CCNGG 2 cut(s) 210, 265
BstSNI TACGTA 1 cut(s) 1455
BstUI CGCG 3 cut(s) 32, 65, 834
BstV1I GCAGC 3 cut(s) 20, 104, 920
BstX2I RGATCY 2 cut(s) 595, 1228
BstYI RGATCY 2 cut(s) 595, 1228
Bsu15I ATCGAT 1 cut(s) 477
BsuI GTATCC 1 cut(s) 138
BsuRI GGCC 3 cut(s) 393, 794, 1074
BsuTUI ATCGAT 1 cut(s) 477
BtgI CCRYGG 1 cut(s) 1350
BtrI CACGTC 1 cut(s) 1078
BtsCI GGATG 7 cut(s) 27, 114, 277, 369, 699, 903, 1360
BtsI GCAGTG 1 cut(s) 1029
BtsIMutI CAGTG 2 cut(s) 376, 1029
Cac8I GCNNGC 6 cut(s) 706, 906, 1016, 1020, 1072, 1264
CaiI CAGNNNCTG 1 cut(s) 1169
CciI TCATGA 2 cut(s) 330, 712
CfoI GCGC 1 cut(s) 836
Cfr13I GGNCC 2 cut(s) 151, 1217
ClaI ATCGAT 1 cut(s) 477
CseI GACGC 1 cut(s) 840
Csp6I GTAC 9 cut(s) 108, 291, 412, 675, 883, 976, 1144, 1151, 1174
CspCI CAANNNNNGTGG 2 cut(s) 881, 916
CviQI GTAC 9 cut(s) 108, 291, 412, 675, 883, 976, 1144, 1151, 1174
DdeI CTNAG 4 cut(s) 123, 295, 321, 599
DpnI GATC 7 cut(s) 121, 476, 480, 506, 597, 1096, 1230
DpnII GATC 7 cut(s) 119, 474, 478, 504, 595, 1094, 1228
EaeI YGGCCR 1 cut(s) 1072
Eam1104I CTCTTC 1 cut(s) 557
EarI CTCTTC 1 cut(s) 557
Eco105I TACGTA 1 cut(s) 1455
Eco130I CCWWGG 2 cut(s) 944, 1350
Eco24I GRGCYC 1 cut(s) 658
Eco32I GATATC 1 cut(s) 617
Eco47I GGWCC 2 cut(s) 151, 1217
Eco57I CTGAAG 1 cut(s) 752
Eco88I CYCGRG 1 cut(s) 444
Eco91I GGTNACC 2 cut(s) 250, 1136
EcoO65I GGTNACC 2 cut(s) 250, 1136
EcoRII CCWGG 2 cut(s) 210, 265
EcoRV GATATC 1 cut(s) 617
EcoT14I CCWWGG 2 cut(s) 944, 1350
EcoT22I ATGCAT 2 cut(s) 966, 1360
EcoT38I GRGCYC 1 cut(s) 658
ErhI CCWWGG 2 cut(s) 944, 1350
FalI AAGNNNNNCTT 2 cut(s) 1194, 1226
FaqI GGGAC 1 cut(s) 659
FauI CCCGC 1 cut(s) 88
Fnu4HI GCNGC 3 cut(s) 9, 93, 909
FokI GGATG 7 cut(s) 34, 101, 284, 356, 706, 910, 1367
FriOI GRGCYC 1 cut(s) 658
Fsp4HI GCNGC 3 cut(s) 9, 93, 909
FspBI CTAG 4 cut(s) 18, 395, 798, 905
GlaI GCGC 1 cut(s) 835
GluI GCNGC 3 cut(s) 9, 93, 909
GsuI CTGGAG 1 cut(s) 1430
HaeIII GGCC 3 cut(s) 393, 794, 1074
HgaI GACGC 1 cut(s) 840
HhaI GCGC 1 cut(s) 836
Hin6I GCGC 1 cut(s) 834
HinP1I GCGC 1 cut(s) 834
HinfI GANTC 6 cut(s) 26, 99, 437, 660, 1198, 1390
HphI GGTGA 5 cut(s) 199, 227, 446, 524, 1019
Hpy166II GTNNAC 4 cut(s) 459, 638, 885, 1174
Hpy188I TCNGA 8 cut(s) 119, 124, 298, 525, 593, 830, 972, 1256
Hpy8I GTNNAC 4 cut(s) 459, 638, 885, 1174
Hpy99I CGWCG 2 cut(s) 593, 668
HpyAV CCTTC 3 cut(s) 355, 998, 1199
HpyCH4III ACNGT 4 cut(s) 380, 642, 1183, 1221
HpyCH4IV ACGT 4 cut(s) 630, 1077, 1125, 1454
HpyCH4V TGCA 9 cut(s) 92, 202, 283, 569, 680, 919, 964, 1250, 1358
HpyF10VI GCNNNNNNNGC 3 cut(s) 575, 1279, 1355
HpyF3I CTNAG 4 cut(s) 123, 295, 321, 599
HpySE526I ACGT 4 cut(s) 630, 1077, 1125, 1454
HspAI GCGC 1 cut(s) 834
KpnI GGTACC 1 cut(s) 294
Kzo9I GATC 7 cut(s) 119, 474, 478, 504, 595, 1094, 1228
LmnI GCTCC 2 cut(s) 193, 1171
Lsp1109I GCAGC 3 cut(s) 20, 104, 920
LweI GCATC 2 cut(s) 845, 1345
MaeI CTAG 4 cut(s) 18, 395, 798, 905
MaeII ACGT 4 cut(s) 630, 1077, 1125, 1454
MaeIII GTNAC 9 cut(s) 13, 179, 215, 250, 745, 863, 1126, 1136, 1365
MalI GATC 7 cut(s) 121, 476, 480, 506, 597, 1096, 1230
MboI GATC 7 cut(s) 119, 474, 478, 504, 595, 1094, 1228
MboII GAAGA 4 cut(s) 574, 758, 1351, 1441
MflI RGATCY 2 cut(s) 595, 1228
MhlI GDGCHC 2 cut(s) 555, 658
MlsI TGGCCA 1 cut(s) 1074
MluCI AATT 6 cut(s) 42, 423, 449, 484, 717, 914
MluNI TGGCCA 1 cut(s) 1074
MlyI GAGTC 1 cut(s) 35
MmeI TCCRAC 2 cut(s) 571, 1165
Mox20I TGGCCA 1 cut(s) 1074
Mph1103I ATGCAT 2 cut(s) 966, 1360
MscI TGGCCA 1 cut(s) 1074
MseI TTAA 1 cut(s) 531
MslI CAYNNNNRTG 4 cut(s) 694, 851, 1080, 1086
Msp20I TGGCCA 1 cut(s) 1074
MspA1I CMGCKG 4 cut(s) 11, 95, 257, 772
MspR9I CCNGG 2 cut(s) 212, 267
Mva1269I GAATGC 4 cut(s) 94, 1250, 1273, 1358
MvaI CCWGG 2 cut(s) 212, 267
MvnI CGCG 3 cut(s) 32, 65, 834
MwoI GCNNNNNNNGC 3 cut(s) 575, 1279, 1355
NcoI CCATGG 1 cut(s) 1350
NdeII GATC 7 cut(s) 119, 474, 478, 504, 595, 1094, 1228
NheI GCTAGC 1 cut(s) 904
NlaIV GGNNCC 3 cut(s) 171, 292, 1322
NmuCI GTSAC 1 cut(s) 215
NsiI ATGCAT 2 cut(s) 966, 1360
NspI RCATGY 3 cut(s) 730, 968, 1018
PaeI GCATGC 1 cut(s) 1018
PaeR7I CTCGAG 1 cut(s) 444
PagI TCATGA 2 cut(s) 330, 712
PasI CCCWGGG 1 cut(s) 211
PctI GAATGC 4 cut(s) 94, 1250, 1273, 1358
PfeI GAWTC 5 cut(s) 99, 437, 660, 1198, 1390
PflMI CCANNNNNTGG 1 cut(s) 272
PkrI GCNGC 3 cut(s) 10, 94, 910
PleI GAGTC 1 cut(s) 34
PpsI GAGTC 1 cut(s) 34
Ppu21I YACGTR 1 cut(s) 1455
Psp6I CCWGG 2 cut(s) 210, 265
PspEI GGTNACC 2 cut(s) 250, 1136
PspGI CCWGG 2 cut(s) 210, 265
PspN4I GGNNCC 3 cut(s) 171, 292, 1322
PspPI GGNCC 2 cut(s) 151, 1217
PstNI CAGNNNCTG 1 cut(s) 1169
PsuI RGATCY 2 cut(s) 595, 1228
RsaI GTAC 9 cut(s) 109, 292, 413, 676, 884, 977, 1145, 1152, 1175
RsaNI GTAC 9 cut(s) 108, 291, 412, 675, 883, 976, 1144, 1151, 1174
RseI CAYNNNNRTG 4 cut(s) 694, 851, 1080, 1086
SaqAI TTAA 1 cut(s) 531
SatI GCNGC 3 cut(s) 9, 93, 909
Sau3AI GATC 7 cut(s) 119, 474, 478, 504, 595, 1094, 1228
Sau96I GGNCC 2 cut(s) 151, 1217
ScaI AGTACT 3 cut(s) 109, 413, 676
SchI GAGTC 1 cut(s) 35
ScrFI CCNGG 2 cut(s) 212, 267
SduI GDGCHC 2 cut(s) 555, 658
SfaNI GCATC 2 cut(s) 845, 1345
Sfr274I CTCGAG 1 cut(s) 444
SinI GGWCC 2 cut(s) 151, 1217
SlaI CTCGAG 1 cut(s) 444
SmiMI CAYNNNNRTG 4 cut(s) 694, 851, 1080, 1086
SmlI CTYRAG 3 cut(s) 444, 548, 1283
SmoI CTYRAG 3 cut(s) 444, 548, 1283
SnaBI TACGTA 1 cut(s) 1455
SphI GCATGC 1 cut(s) 1018
Sse9I AATT 6 cut(s) 42, 423, 449, 484, 717, 914
SsiI CCGC 8 cut(s) 11, 30, 95, 167, 255, 772, 1324, 1347
SspMI CTAG 4 cut(s) 18, 395, 798, 905
StyD4I CCNGG 2 cut(s) 210, 265
StyI CCWWGG 2 cut(s) 944, 1350
TaaI ACNGT 4 cut(s) 380, 642, 1183, 1221
TaiI ACGT 4 cut(s) 633, 1080, 1128, 1457
TaqI TCGA 4 cut(s) 445, 477, 658, 666
TasI AATT 6 cut(s) 42, 423, 449, 484, 717, 914
TatI WGTACW 6 cut(s) 107, 411, 674, 882, 975, 1173
TfiI GAWTC 5 cut(s) 99, 437, 660, 1198, 1390
Tru1I TTAA 1 cut(s) 531
Tru9I TTAA 1 cut(s) 531
TscAI CASTG 2 cut(s) 383, 1029
TseFI GTSAC 1 cut(s) 215
TseI GCWGC 3 cut(s) 8, 92, 908
Tsp45I GTSAC 1 cut(s) 215
TspDTI ATGAA 5 cut(s) 95, 103, 429, 575, 729
TspGWI ACGGA 2 cut(s) 741, 774
TspRI CASTG 2 cut(s) 383, 1029
Van91I CCANNNNNTGG 1 cut(s) 272
VpaK11BI GGWCC 2 cut(s) 151, 1217
XapI RAATTY 2 cut(s) 449, 484
XceI RCATGY 3 cut(s) 730, 968, 1018
XcmI CCANNNNNNNNNTGG 1 cut(s) 359
XhoI CTCGAG 1 cut(s) 444
XspI CTAG 4 cut(s) 18, 395, 798, 905
ZrmI AGTACT 3 cut(s) 109, 413, 676
Zsp2I ATGCAT 2 cut(s) 966, 1360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.