MD15G1164300.v1.1

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
12369682 .. 12373858
4177 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1164300.v1.1.491

Sequence Viewer

Length: 1458 bp
ATGACGGCAGTGGTTACTAGGACGGAGTCCACGCTGCTTCGAATTATCCTTACCTCCTTCGTCTTGTTGAGCCTTTTGAGGAGTGGGAATGCTGCAGGAATCACGAGTACTTTCATTCGATCTGAGCATCCATCGGTTGACATCCCTCTGAACAATAAAGTATTTGCGGTGCCGAAGGGTTACAATGCTCCACAACAAGTGCATATCACCCAAGGTGACTATGATGGAAAGGCTGTAATCATCTCATGGGTTACGGCCAACGAACCAGGGGATAGTAAAGTGCAGTATGGTACATCAGAGAAAAAATACGAGTTTTCTGCTAAGGGTGTCGTGACAAACTACACCTTCTACCAGTATAAGTCTGGCTACATCCATCACTGTCTTGTCGAAGGCCTAGAGTATGACACAAAGTACTATTACAAAATTGGAAATGGCGATTCATCTCGAGAATTTTGGTTTACAACACCTCCAAAGATCGATCCAAATTCTCATTACACATTTGGGATCATAGGTGATTTGGGTCAGACATTTAACTCTCTGTCAACTCTTGAGCACTACATGAAGAGTTCAGGACAGGCTGTTTTATTTGTTGGAGATCTTTCCTATGCTGATAGATATCAGTATAATGAAGTGGGTTTACGGTGGGACACATGGGCTCGATTCATCGAGCAAAGTACTGCGTATCAGCCATGGATGTGGTCTGCTGGCAATCATGAAATTGATTACATGCCTTATATGGGAGAAGTTACTCCGTTCAAGAACTATCTTCATCGGTATGCTACTCCTCATTTGGCCTCTAATAGTAGCAATCCTCTTTGGTATGCCATCAGACGTGCATCAGCTCATATAATCGTGTTGTCCAGTTACTCTCCATTTGTGAAGTACACGCCTCAATGGAGTTGGCTAGCAGAAGAATTGAAAAGGGTTGACAGGGAAAAGACACCTTGGCTCATAGTCCTTATGCATGTTCCATTATACAATAGTAACGACGTTCATTACATGGAAGGTGAAAGCATGCGAGCAGTGTTTGAGAGATGGTTCGTTCAATACAAAGTTGATGTGGTGTTTGCTGGCCATGTCCATGCTTATGAGAGATCGTATCGAATCTCCAATATACGATACAACGTAACAAGCGGTTACCAGTACCCGATACCAGACAAATCGGCTCCTGTATACATAACTGTTGGAGATGGAGGGAACCAAGAAGGCCTTGCTGGAAGGTTTAGGAATCCACAACCAGATTATTCTGCATTCCGAGAAGCCAGCTACGGGCATTCCACGCTTGAGCTTATAAACAGGACACACGCACTCTATCATTGGAACCGCAATGATGATGGGAAGAAAACCGCAATGGACGCATTTATATTAGACAACCAGTACTGGAGTGCGAATCACAGGAGGCGAAAACTGAAGAAGCATAATGTTAGGAAGACAATGGACGAAATTGCTATGTATTGA

Protein Analysis

486

Amino Acids

56.1

Weight (kDa)

8.66

Isoelectric Point (pI)

42.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pur_ac_phosph_N PF16656 64 - 155 4.2e-24 Purple acid Phosphatase, N-terminal domain
Metallophos PF00149 166 - 363 6.2e-24 Calcineurin-like phosphoesterase
Metallophos_C PF14008 389 - 447 5.5e-20 Iron/zinc purple acid phosphatase-like protein C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1292
AccB1I GGYRCC 1 cut(s) 169
AccI GTMKAC 1 cut(s) 1173
AciI CCGC 4 cut(s) 167, 1134, 1324, 1347
AclWI GGATC 2 cut(s) 473, 512
AcoI YGGCCR 2 cut(s) 255, 1072
AcsI RAATTY 2 cut(s) 449, 484
AcuI CTGAAG 1 cut(s) 1430
AfaI GTAC 7 cut(s) 109, 292, 413, 676, 884, 1145, 1379
AfiI CCNNNNNNNGG 2 cut(s) 737, 1269
AgsI TTSAA 3 cut(s) 757, 919, 1046
AjiI CACGTC 1 cut(s) 833
AjnI CCWGG 1 cut(s) 265
AluBI AGCT 3 cut(s) 842, 1266, 1288
AluI AGCT 3 cut(s) 842, 1266, 1288
Alw21I GWGCWC 1 cut(s) 555
AlwI GGATC 2 cut(s) 473, 512
Ama87I CYCGRG 1 cut(s) 444
AoxI GGCC 5 cut(s) 255, 391, 792, 1072, 1207
ApeKI GCWGC 2 cut(s) 34, 92
ApoI RAATTY 2 cut(s) 449, 484
AsuHPI GGTGA 4 cut(s) 199, 227, 524, 1019
AsuII TTCGAA 1 cut(s) 40
AsuNHI GCTAGC 1 cut(s) 904
AvaI CYCGRG 1 cut(s) 444
BalI TGGCCA 1 cut(s) 1074
BanI GGYRCC 1 cut(s) 169
BanII GRGCYC 1 cut(s) 658
BarI GAAGNNNNNNTAC 2 cut(s) 621, 653
BauI CACGAG 1 cut(s) 103
BbsI GAAGAC 1 cut(s) 1436
Bbv12I GWGCWC 1 cut(s) 555
BbvI GCAGC 2 cut(s) 21, 79
BccI CCATC 7 cut(s) 139, 218, 381, 833, 1029, 1184, 1328
BceAI ACGGC 2 cut(s) 21, 270
BcgI CGANNNNNNTGC 2 cut(s) 299, 333
BciT130I CCWGG 1 cut(s) 267
BfaI CTAG 3 cut(s) 18, 395, 905
BfmI CTRYAG 1 cut(s) 93
BglII AGATCT 1 cut(s) 595
BisI GCNGC 2 cut(s) 35, 93
BlsI GCNGC 2 cut(s) 36, 94
BmcAI AGTACT 4 cut(s) 109, 413, 676, 1379
Bme1390I CCNGG 1 cut(s) 267
BmeT110I CYCGRG 1 cut(s) 444
BmgBI CACGTC 1 cut(s) 833
BmiI GGNNCC 4 cut(s) 171, 1167, 1199, 1322
BmrFI CCNGG 1 cut(s) 267
BmsI GCATC 2 cut(s) 136, 845
BmtI GCTAGC 1 cut(s) 908
BpiI GAAGAC 1 cut(s) 1436
BpmI CTGGAG 1 cut(s) 1402
Bpu10I CCTNAGC 1 cut(s) 321
Bpu14I TTCGAA 1 cut(s) 40
BpuEI CTTGAG 2 cut(s) 569, 1304
Bsa29I ATCGAT 1 cut(s) 477
BsaBI GATNNNNATC 1 cut(s) 615
BsaJI CCNNGG 4 cut(s) 211, 266, 689, 944
BsaXI ACNNNNNCTCC 2 cut(s) 451, 481
Bsc4I CCNNNNNNNGG 2 cut(s) 737, 1269
Bse1I ACTGG 5 cut(s) 352, 861, 1141, 1375, 1385
Bse3DI GCAATG 2 cut(s) 1333, 1356
Bse8I GATNNNNATC 1 cut(s) 615
BseBI CCWGG 1 cut(s) 267
BseCI ATCGAT 1 cut(s) 477
BseDI CCNNGG 4 cut(s) 211, 266, 689, 944
BseGI GGATG 4 cut(s) 127, 141, 369, 699
BseJI GATNNNNATC 1 cut(s) 615
BseLI CCNNNNNNNGG 2 cut(s) 737, 1269
BseMI GCAATG 2 cut(s) 1333, 1356
BseMII CTCAG 1 cut(s) 114
BseNI ACTGG 5 cut(s) 352, 861, 1141, 1375, 1385
BseRI GAGGAG 2 cut(s) 94, 774
BseXI GCAGC 2 cut(s) 21, 79
BsgI GTGCAG 1 cut(s) 302
BshFI GGCC 5 cut(s) 257, 393, 794, 1074, 1209
BshNI GGYRCC 1 cut(s) 169
BshVI ATCGAT 1 cut(s) 477
BsiHKAI GWGCWC 1 cut(s) 555
BsiHKCI CYCGRG 1 cut(s) 444
BslFI GGGAC 1 cut(s) 659
BslI CCNNNNNNNGG 2 cut(s) 737, 1269
BsmFI GGGAC 1 cut(s) 659
BsmI GAATGC 3 cut(s) 94, 1250, 1273
BsnI GGCC 5 cut(s) 257, 393, 794, 1074, 1209
BsoBI CYCGRG 1 cut(s) 444
Bsp119I TTCGAA 1 cut(s) 40
Bsp1286I GDGCHC 2 cut(s) 555, 658
Bsp143I GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
Bsp19I CCATGG 1 cut(s) 689
BspACI CCGC 4 cut(s) 167, 1134, 1324, 1347
BspANI GGCC 5 cut(s) 257, 393, 794, 1074, 1209
BspCNI CTCAG 1 cut(s) 115
BspDI ATCGAT 1 cut(s) 477
BspHI TCATGA 1 cut(s) 712
BspLI GGNNCC 4 cut(s) 171, 1167, 1199, 1322
BspMAI CTGCAG 1 cut(s) 97
BspOI GCTAGC 1 cut(s) 908
BspPI GGATC 2 cut(s) 473, 512
BspT104I TTCGAA 1 cut(s) 40
BspT107I GGYRCC 1 cut(s) 169
BsrDI GCAATG 2 cut(s) 1333, 1356
BsrI ACTGG 5 cut(s) 352, 861, 1141, 1375, 1385
BssECI CCNNGG 4 cut(s) 211, 266, 689, 944
BssMI GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
BssNAI GTATAC 1 cut(s) 1174
BssSI CACGAG 1 cut(s) 103
BssT1I CCWWGG 3 cut(s) 211, 689, 944
Bst1107I GTATAC 1 cut(s) 1174
Bst2BI CACGAG 1 cut(s) 103
Bst2UI CCWGG 1 cut(s) 267
Bst4CI ACNGT 3 cut(s) 380, 642, 1183
Bst6I CTCTTC 1 cut(s) 557
BstBI TTCGAA 1 cut(s) 40
BstC8I GCNNGC 6 cut(s) 706, 906, 1016, 1020, 1072, 1264
BstDEI CTNAG 2 cut(s) 123, 321
BstDSI CCRYGG 1 cut(s) 689
BstEII GGTNACC 1 cut(s) 1136
BstF5I GGATG 4 cut(s) 127, 141, 369, 699
BstKTI GATC 6 cut(s) 122, 477, 481, 507, 598, 1097
BstMBI GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
BstMWI GCNNNNNNNGC 2 cut(s) 1279, 1355
BstNI CCWGG 1 cut(s) 267
BstNSI RCATGY 3 cut(s) 730, 968, 1018
BstPI GGTNACC 1 cut(s) 1136
BstSCI CCNGG 1 cut(s) 265
BstSFI CTRYAG 1 cut(s) 93
BstV1I GCAGC 2 cut(s) 21, 79
BstV2I GAAGAC 1 cut(s) 1436
BstX2I RGATCY 1 cut(s) 595
BstXI CCANNNNNNTGG 1 cut(s) 696
BstYI RGATCY 1 cut(s) 595
BstZ17I GTATAC 1 cut(s) 1174
Bsu15I ATCGAT 1 cut(s) 477
BsuRI GGCC 5 cut(s) 257, 393, 794, 1074, 1209
BsuTUI ATCGAT 1 cut(s) 477
BtgI CCRYGG 1 cut(s) 689
BtrI CACGTC 1 cut(s) 833
BtsCI GGATG 4 cut(s) 127, 141, 369, 699
BtsI GCAGTG 2 cut(s) 15, 1029
BtsIMutI CAGTG 3 cut(s) 15, 376, 1029
Cac8I GCNNGC 6 cut(s) 706, 906, 1016, 1020, 1072, 1264
CciI TCATGA 1 cut(s) 712
ClaI ATCGAT 1 cut(s) 477
CseI GACGC 1 cut(s) 1364
Csp6I GTAC 7 cut(s) 108, 291, 412, 675, 883, 1144, 1378
CviQI GTAC 7 cut(s) 108, 291, 412, 675, 883, 1144, 1378
DdeI CTNAG 2 cut(s) 123, 321
DpnI GATC 6 cut(s) 121, 476, 480, 506, 597, 1096
DpnII GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
EaeI YGGCCR 2 cut(s) 255, 1072
Eam1104I CTCTTC 1 cut(s) 557
EarI CTCTTC 1 cut(s) 557
Eco130I CCWWGG 3 cut(s) 211, 689, 944
Eco147I AGGCCT 2 cut(s) 393, 1209
Eco24I GRGCYC 1 cut(s) 658
Eco32I GATATC 1 cut(s) 617
Eco57I CTGAAG 1 cut(s) 1430
Eco88I CYCGRG 1 cut(s) 444
Eco91I GGTNACC 1 cut(s) 1136
EcoO65I GGTNACC 1 cut(s) 1136
EcoRII CCWGG 1 cut(s) 265
EcoRV GATATC 1 cut(s) 617
EcoT14I CCWWGG 3 cut(s) 211, 689, 944
EcoT22I ATGCAT 1 cut(s) 966
EcoT38I GRGCYC 1 cut(s) 658
ErhI CCWWGG 3 cut(s) 211, 689, 944
FalI AAGNNNNNCTT 2 cut(s) 1194, 1226
FaqI GGGAC 1 cut(s) 659
FblI GTMKAC 1 cut(s) 1173
Fnu4HI GCNGC 2 cut(s) 35, 93
FokI GGATG 4 cut(s) 114, 128, 356, 706
FriOI GRGCYC 1 cut(s) 658
Fsp4HI GCNGC 2 cut(s) 35, 93
FspBI CTAG 3 cut(s) 18, 395, 905
GluI GCNGC 2 cut(s) 35, 93
GsuI CTGGAG 1 cut(s) 1402
HaeIII GGCC 5 cut(s) 257, 393, 794, 1074, 1209
HgaI GACGC 1 cut(s) 1364
HincII GTYRAC 3 cut(s) 139, 543, 928
HindII GTYRAC 3 cut(s) 139, 543, 928
HinfI GANTC 7 cut(s) 26, 99, 437, 660, 1104, 1228, 1390
HphI GGTGA 4 cut(s) 199, 227, 524, 1019
Hpy166II GTNNAC 8 cut(s) 30, 139, 459, 543, 638, 885, 928, 1174
Hpy188I TCNGA 6 cut(s) 124, 150, 298, 525, 830, 1256
Hpy188III TCNNGA 8 cut(s) 103, 331, 444, 446, 548, 570, 713, 757
Hpy8I GTNNAC 8 cut(s) 30, 139, 459, 543, 638, 885, 928, 1174
Hpy99I CGWCG 1 cut(s) 992
HpyAV CCTTC 7 cut(s) 67, 169, 355, 383, 998, 1199, 1212
HpyCH4III ACNGT 3 cut(s) 380, 642, 1183
HpyCH4IV ACGT 3 cut(s) 832, 990, 1125
HpyCH4V TGCA 6 cut(s) 95, 202, 283, 836, 964, 1250
HpyF10VI GCNNNNNNNGC 2 cut(s) 1279, 1355
HpyF3I CTNAG 2 cut(s) 123, 321
HpySE526I ACGT 3 cut(s) 832, 990, 1125
Kzo9I GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
LmnI GCTCC 2 cut(s) 193, 1171
Lsp1109I GCAGC 2 cut(s) 21, 79
LweI GCATC 2 cut(s) 136, 845
MaeI CTAG 3 cut(s) 18, 395, 905
MaeII ACGT 3 cut(s) 832, 990, 1125
MalI GATC 6 cut(s) 121, 476, 480, 506, 597, 1096
MboI GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
MboII GAAGA 6 cut(s) 574, 758, 923, 1351, 1423, 1441
MflI RGATCY 1 cut(s) 595
MhlI GDGCHC 2 cut(s) 555, 658
MlsI TGGCCA 1 cut(s) 1074
MluCI AATT 7 cut(s) 42, 423, 449, 484, 717, 914, 1443
MluNI TGGCCA 1 cut(s) 1074
MlyI GAGTC 1 cut(s) 35
MmeI TCCRAC 2 cut(s) 571, 1165
Mox20I TGGCCA 1 cut(s) 1074
Mph1103I ATGCAT 1 cut(s) 966
MscI TGGCCA 1 cut(s) 1074
MseI TTAA 1 cut(s) 531
MslI CAYNNNNRTG 4 cut(s) 694, 774, 1080, 1086
Msp20I TGGCCA 1 cut(s) 1074
MspR9I CCNGG 1 cut(s) 267
Mva1269I GAATGC 3 cut(s) 94, 1250, 1273
MvaI CCWGG 1 cut(s) 267
MwoI GCNNNNNNNGC 2 cut(s) 1279, 1355
NcoI CCATGG 1 cut(s) 689
NdeII GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
NheI GCTAGC 1 cut(s) 904
NlaIV GGNNCC 4 cut(s) 171, 1167, 1199, 1322
NmuCI GTSAC 2 cut(s) 215, 331
NsiI ATGCAT 1 cut(s) 966
NspI RCATGY 3 cut(s) 730, 968, 1018
NspV TTCGAA 1 cut(s) 40
PaeI GCATGC 1 cut(s) 1018
PaeR7I CTCGAG 1 cut(s) 444
PagI TCATGA 1 cut(s) 712
PceI AGGCCT 2 cut(s) 393, 1209
PctI GAATGC 3 cut(s) 94, 1250, 1273
PfeI GAWTC 6 cut(s) 99, 437, 660, 1104, 1228, 1390
PflFI GACNNNGTC 1 cut(s) 25
PkrI GCNGC 2 cut(s) 36, 94
PleI GAGTC 1 cut(s) 34
PpsI GAGTC 1 cut(s) 34
PsiI TTATAA 1 cut(s) 1292
Psp6I CCWGG 1 cut(s) 265
PspEI GGTNACC 1 cut(s) 1136
PspGI CCWGG 1 cut(s) 265
PspN4I GGNNCC 4 cut(s) 171, 1167, 1199, 1322
PstI CTGCAG 1 cut(s) 97
PsuI RGATCY 1 cut(s) 595
PsyI GACNNNGTC 1 cut(s) 25
RsaI GTAC 7 cut(s) 109, 292, 413, 676, 884, 1145, 1379
RsaNI GTAC 7 cut(s) 108, 291, 412, 675, 883, 1144, 1378
RseI CAYNNNNRTG 4 cut(s) 694, 774, 1080, 1086
SaqAI TTAA 1 cut(s) 531
SatI GCNGC 2 cut(s) 35, 93
Sau3AI GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
ScaI AGTACT 4 cut(s) 109, 413, 676, 1379
SchI GAGTC 1 cut(s) 35
ScrFI CCNGG 1 cut(s) 267
SduI GDGCHC 2 cut(s) 555, 658
SfaNI GCATC 2 cut(s) 136, 845
SfcI CTRYAG 1 cut(s) 93
Sfr274I CTCGAG 1 cut(s) 444
SfuI TTCGAA 1 cut(s) 40
SlaI CTCGAG 1 cut(s) 444
SmiMI CAYNNNNRTG 4 cut(s) 694, 774, 1080, 1086
SmlI CTYRAG 3 cut(s) 444, 548, 1283
SmoI CTYRAG 3 cut(s) 444, 548, 1283
SphI GCATGC 1 cut(s) 1018
Sse9I AATT 7 cut(s) 42, 423, 449, 484, 717, 914, 1443
SseBI AGGCCT 2 cut(s) 393, 1209
SsiI CCGC 4 cut(s) 167, 1134, 1324, 1347
SspMI CTAG 3 cut(s) 18, 395, 905
StuI AGGCCT 2 cut(s) 393, 1209
StyD4I CCNGG 1 cut(s) 265
StyI CCWWGG 3 cut(s) 211, 689, 944
TaaI ACNGT 3 cut(s) 380, 642, 1183
TaiI ACGT 3 cut(s) 835, 993, 1128
TaqI TCGA 8 cut(s) 40, 118, 387, 445, 477, 658, 666, 1102
TasI AATT 7 cut(s) 42, 423, 449, 484, 717, 914, 1443
TatI WGTACW 5 cut(s) 107, 411, 674, 882, 1377
TfiI GAWTC 6 cut(s) 99, 437, 660, 1104, 1228, 1390
Tru1I TTAA 1 cut(s) 531
Tru9I TTAA 1 cut(s) 531
TscAI CASTG 3 cut(s) 15, 383, 1029
TseFI GTSAC 2 cut(s) 215, 331
TseI GCWGC 2 cut(s) 34, 92
Tsp45I GTSAC 2 cut(s) 215, 331
TspDTI ATGAA 8 cut(s) 103, 429, 575, 642, 652, 729, 758, 983
TspGWI ACGGA 2 cut(s) 38, 741
TspRI CASTG 3 cut(s) 15, 383, 1029
Tth111I GACNNNGTC 1 cut(s) 25
XapI RAATTY 2 cut(s) 449, 484
XceI RCATGY 3 cut(s) 730, 968, 1018
XcmI CCANNNNNNNNNTGG 1 cut(s) 359
XhoI CTCGAG 1 cut(s) 444
XmiI GTMKAC 1 cut(s) 1173
XspI CTAG 3 cut(s) 18, 395, 905
ZrmI AGTACT 4 cut(s) 109, 413, 676, 1379
Zsp2I ATGCAT 1 cut(s) 966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.