pycom02g01880

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
1116560 .. 1119288
2729 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g01880.9

Sequence Viewer

Length: 1464 bp
ATGAGGGCAGCGGTTACTAGGATGGAGTCTGCGTTGCTTGCAATTATTCTTACCTCTATTGTCGCGTTGAGCTTCTTGATGAATGGGAATGCAACGGGAATCACGAGTACTTTCATCCGATCCGAGTATCCATCGGTTGATATACCTCTGAACCATAAAGTATTTGCTGTGCCAAGGGGTTACAATGCTCCACAACAAGTGCATATCACCCAGGGTGACTATGATGGAAAGGCTGTAATCATCTCATGGGTTACCGCCGACAAACCAGGGGATAGTAAAGTGCAGTATGGTACCTCAGAGAAAAAATACGAGTTTTCTGCTAAGGGGGTCATGACAAACTACACCTTCTACCATTATAAATCTGGCTACATCCATCACTGTCTTGTTGATGGCCTAGAGTATGACACAAAGTACTACTACAAAATTGGAAATGGTGATTCATCTCGAGAATTTTGGTTTACAACGCCTCCAAAGATCGATCCAAATTCTCATTACATATTTGGATCGATCATAGGTGATTTGGGTCAGACATTTAACTCTCTGTCGACTCTTGAGCACTATGTGAAGAGCGCAGGACAGGCTGTTTTATTCGTCGGAGATCTTTCCTATGCTGATAGATATGAATATAATGACGTGGGTTTACGGTGGGACACATGGGGTCGATTCGTCGAGCAAAGTACTGCATATCAGTCATGGATGTGGTCTGCGGGAAATCATGAAATTGATTACATGCCTTATATGGGAGAAGTTACTCCGTTCAAGAACTATCTTCAGCGGCATGCTACTCCGTATTTGGCCTCTGGTAGTAGCAACCCTCTTTGGTATGCCATCAGACGCGCATCAGCTCACATAATCGTGTTGTCCAGTTACTCTCCATTTGTGAAGTACACGCCTCAATGGATGTGGCTAGAAGCCGAATTGAAAAGGGTTGACAGGGAAAAGACACCTTGGCTCATAGTCCTTATGCATGTTCCGATATACAACAGTAATGAGGCTCATTACATGGAAGGTGAAAGCATGCGAGCAGTGTTTGAGAGTTGGTTCGTTCAATACAAAGTTGATGTGGTGTTTGCTGGCCACGTCCATGCTTATGAGAGATCGTATCGTTTCTCCAATATACAATACAACGTAACAAGTGGTTACCAGTACCCCGTACCAGACAAATCAGCTCCTGTATACATAACTGTTGGAGACGGAGGGAATCAAGAAGGACTTGCTGGACGGTTTAGAGATCCACAACCAAATTATTCTGCATTCCGAGAAGCAAGCTACGGGCATTCGACGCTTGAGTTGATAAACAGGACACACGCACTCTACCATTGGAACCGCAATGATGATGGGAACAAAACCGCAGTGGATGCATTCGTATTGCACAACCAATACTGGGGTGCGAATCACGGGAAGCGAAAACTGGAGAAGCATAATGTTAGGAAGATAATGATGGACGAAATTGCTACGCATTGA

Protein Analysis

488

Amino Acids

55.91

Weight (kDa)

6.88

Isoelectric Point (pI)

36.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 357
Acc65I GGTACC 1 cut(s) 290
AccB1I GGYRCC 1 cut(s) 290
AccI GTMKAC 2 cut(s) 545, 1176
AccII CGCG 2 cut(s) 65, 837
AciI CCGC 6 cut(s) 11, 255, 707, 775, 1327, 1350
AclWI GGATC 4 cut(s) 114, 473, 511, 1226
AcoI YGGCCR 1 cut(s) 1075
AcsI RAATTY 2 cut(s) 449, 484
AcuI CTGAAG 1 cut(s) 755
AdeI CACNNNGTG 1 cut(s) 562
AfaI GTAC 7 cut(s) 109, 292, 413, 679, 887, 1148, 1155
AfiI CCNNNNNNNGG 2 cut(s) 740, 1384
AgsI TTSAA 3 cut(s) 760, 922, 1049
AjiI CACGTC 2 cut(s) 634, 1081
AjnI CCWGG 2 cut(s) 210, 265
AluBI AGCT 4 cut(s) 72, 845, 1169, 1269
AluI AGCT 4 cut(s) 72, 845, 1169, 1269
Alw21I GWGCWC 1 cut(s) 558
Alw26I GTCTC 1 cut(s) 1185
AlwI GGATC 4 cut(s) 114, 473, 511, 1226
AlwNI CAGNNNCTG 1 cut(s) 1172
Ama87I CYCGRG 1 cut(s) 444
AoxI GGCC 3 cut(s) 391, 795, 1075
ApeKI GCWGC 1 cut(s) 8
ApoI RAATTY 2 cut(s) 449, 484
Asp718I GGTACC 1 cut(s) 290
AspLEI GCGC 2 cut(s) 572, 839
AsuHPI GGTGA 5 cut(s) 199, 227, 446, 527, 1022
AvaI CYCGRG 1 cut(s) 444
BalI TGGCCA 1 cut(s) 1077
BanI GGYRCC 1 cut(s) 290
BauI CACGAG 1 cut(s) 103
Bbv12I GWGCWC 1 cut(s) 558
BbvI GCAGC 1 cut(s) 20
BccI CCATC 8 cut(s) 16, 139, 218, 381, 383, 836, 1331, 1435
BcgI CGANNNNNNTGC 2 cut(s) 299, 333
BciT130I CCWGG 2 cut(s) 212, 267
BciVI GTATCC 1 cut(s) 138
BcoDI GTCTC 1 cut(s) 1185
BfaI CTAG 3 cut(s) 18, 395, 908
BfuI GTATCC 1 cut(s) 138
BglII AGATCT 1 cut(s) 598
BisI GCNGC 2 cut(s) 9, 776
BlsI GCNGC 2 cut(s) 10, 777
BmcAI AGTACT 3 cut(s) 109, 413, 679
Bme1390I CCNGG 2 cut(s) 212, 267
BmeT110I CYCGRG 1 cut(s) 444
BmgBI CACGTC 2 cut(s) 634, 1081
BmiI GGNNCC 2 cut(s) 292, 1325
BmrFI CCNGG 2 cut(s) 212, 267
BmrI ACTGGG 1 cut(s) 1393
BmsI GCATC 2 cut(s) 848, 1348
BmuI ACTGGG 1 cut(s) 1393
BpmI CTGGAG 1 cut(s) 1433
Bpu10I CCTNAGC 1 cut(s) 321
BpuEI CTTGAG 2 cut(s) 572, 1307
Bsa29I ATCGAT 2 cut(s) 477, 506
BsaJI CCNNGG 5 cut(s) 173, 210, 211, 266, 947
BsaXI ACNNNNNCTCC 4 cut(s) 17, 47, 451, 481
Bsc4I CCNNNNNNNGG 2 cut(s) 740, 1384
Bse1I ACTGG 4 cut(s) 864, 1144, 1388, 1416
Bse3DI GCAATG 1 cut(s) 1336
BseBI CCWGG 2 cut(s) 212, 267
BseCI ATCGAT 2 cut(s) 477, 506
BseDI CCNNGG 5 cut(s) 173, 210, 211, 266, 947
BseGI GGATG 6 cut(s) 27, 114, 369, 702, 906, 1363
BseLI CCNNNNNNNGG 2 cut(s) 740, 1384
BseMI GCAATG 1 cut(s) 1336
BseMII CTCAG 1 cut(s) 309
BseNI ACTGG 4 cut(s) 864, 1144, 1388, 1416
BseXI GCAGC 1 cut(s) 20
BsgI GTGCAG 1 cut(s) 302
Bsh1236I CGCG 2 cut(s) 65, 837
BshFI GGCC 3 cut(s) 393, 797, 1077
BshNI GGYRCC 1 cut(s) 290
BshVI ATCGAT 2 cut(s) 477, 506
BsiHKAI GWGCWC 1 cut(s) 558
BsiHKCI CYCGRG 1 cut(s) 444
BslFI GGGAC 1 cut(s) 662
BslI CCNNNNNNNGG 2 cut(s) 740, 1384
BsmAI GTCTC 1 cut(s) 1185
BsmBI CGTCTC 1 cut(s) 1185
BsmFI GGGAC 1 cut(s) 662
BsmI GAATGC 4 cut(s) 94, 1253, 1276, 1361
BsnI GGCC 3 cut(s) 393, 797, 1077
BsoBI CYCGRG 1 cut(s) 444
Bsp1286I GDGCHC 1 cut(s) 558
Bsp143I GATC 8 cut(s) 119, 474, 478, 503, 507, 598, 1097, 1231
BspACI CCGC 6 cut(s) 11, 255, 707, 775, 1327, 1350
BspANI GGCC 3 cut(s) 393, 797, 1077
BspCNI CTCAG 1 cut(s) 308
BspDI ATCGAT 2 cut(s) 477, 506
BspFNI CGCG 2 cut(s) 65, 837
BspHI TCATGA 2 cut(s) 330, 715
BspLI GGNNCC 2 cut(s) 292, 1325
BspPI GGATC 4 cut(s) 114, 473, 511, 1226
BspQI GCTCTTC 1 cut(s) 560
BspT107I GGYRCC 1 cut(s) 290
BsrDI GCAATG 1 cut(s) 1336
BsrI ACTGG 4 cut(s) 864, 1144, 1388, 1416
BssECI CCNNGG 5 cut(s) 173, 210, 211, 266, 947
BssMI GATC 8 cut(s) 119, 474, 478, 503, 507, 598, 1097, 1231
BssNAI GTATAC 1 cut(s) 1177
BssSI CACGAG 1 cut(s) 103
BssT1I CCWWGG 2 cut(s) 173, 947
Bst1107I GTATAC 1 cut(s) 1177
Bst2BI CACGAG 1 cut(s) 103
Bst2UI CCWGG 2 cut(s) 212, 267
Bst4CI ACNGT 5 cut(s) 380, 645, 986, 1186, 1224
Bst6I CTCTTC 1 cut(s) 560
BstAPI GCANNNNNTGC 1 cut(s) 1358
BstC8I GCNNGC 6 cut(s) 39, 780, 1019, 1023, 1075, 1267
BstDEI CTNAG 2 cut(s) 295, 321
BstEII GGTNACC 2 cut(s) 250, 1139
BstF5I GGATG 6 cut(s) 27, 114, 369, 702, 906, 1363
BstFNI CGCG 2 cut(s) 65, 837
BstHHI GCGC 2 cut(s) 572, 839
BstKTI GATC 8 cut(s) 122, 477, 481, 506, 510, 601, 1100, 1234
BstMAI GTCTC 1 cut(s) 1185
BstMBI GATC 8 cut(s) 119, 474, 478, 503, 507, 598, 1097, 1231
BstMWI GCNNNNNNNGC 4 cut(s) 38, 578, 1282, 1358
BstNI CCWGG 2 cut(s) 212, 267
BstNSI RCATGY 4 cut(s) 733, 782, 971, 1021
BstPI GGTNACC 2 cut(s) 250, 1139
BstSCI CCNGG 2 cut(s) 210, 265
BstUI CGCG 2 cut(s) 65, 837
BstV1I GCAGC 1 cut(s) 20
BstX2I RGATCY 2 cut(s) 598, 1231
BstYI RGATCY 2 cut(s) 598, 1231
BstZ17I GTATAC 1 cut(s) 1177
Bsu15I ATCGAT 2 cut(s) 477, 506
BsuI GTATCC 1 cut(s) 138
BsuRI GGCC 3 cut(s) 393, 797, 1077
BsuTUI ATCGAT 2 cut(s) 477, 506
BtrI CACGTC 2 cut(s) 634, 1081
BtsCI GGATG 6 cut(s) 27, 114, 369, 702, 906, 1363
BtsI GCAGTG 2 cut(s) 1032, 1359
BtsIMutI CAGTG 3 cut(s) 376, 1032, 1359
Cac8I GCNNGC 6 cut(s) 39, 780, 1019, 1023, 1075, 1267
CaiI CAGNNNCTG 1 cut(s) 1172
CciI TCATGA 2 cut(s) 330, 715
CfoI GCGC 2 cut(s) 572, 839
ClaI ATCGAT 2 cut(s) 477, 506
CseI GACGC 2 cut(s) 843, 1291
Csp6I GTAC 7 cut(s) 108, 291, 412, 678, 886, 1147, 1154
CspCI CAANNNNNGTGG 2 cut(s) 884, 919
CviQI GTAC 7 cut(s) 108, 291, 412, 678, 886, 1147, 1154
DdeI CTNAG 2 cut(s) 295, 321
DpnI GATC 8 cut(s) 121, 476, 480, 505, 509, 600, 1099, 1233
DpnII GATC 8 cut(s) 119, 474, 478, 503, 507, 598, 1097, 1231
DraIII CACNNNGTG 1 cut(s) 562
EaeI YGGCCR 1 cut(s) 1075
Eam1104I CTCTTC 1 cut(s) 560
EarI CTCTTC 1 cut(s) 560
Eco130I CCWWGG 2 cut(s) 173, 947
Eco57I CTGAAG 1 cut(s) 755
Eco88I CYCGRG 1 cut(s) 444
Eco91I GGTNACC 2 cut(s) 250, 1139
EcoO65I GGTNACC 2 cut(s) 250, 1139
EcoRII CCWGG 2 cut(s) 210, 265
EcoT14I CCWWGG 2 cut(s) 173, 947
EcoT22I ATGCAT 2 cut(s) 969, 1363
ErhI CCWWGG 2 cut(s) 173, 947
Esp3I CGTCTC 1 cut(s) 1185
FalI AAGNNNNNCTT 2 cut(s) 1197, 1229
FaqI GGGAC 1 cut(s) 662
FauI CCCGC 1 cut(s) 700
FblI GTMKAC 2 cut(s) 545, 1176
Fnu4HI GCNGC 2 cut(s) 9, 776
FokI GGATG 6 cut(s) 34, 101, 356, 709, 913, 1370
Fsp4HI GCNGC 2 cut(s) 9, 776
FspBI CTAG 3 cut(s) 18, 395, 908
GlaI GCGC 2 cut(s) 571, 838
GluI GCNGC 2 cut(s) 9, 776
GsuI CTGGAG 1 cut(s) 1433
HaeIII GGCC 3 cut(s) 393, 797, 1077
HgaI GACGC 2 cut(s) 843, 1291
HhaI GCGC 2 cut(s) 572, 839
Hin6I GCGC 2 cut(s) 570, 837
HinP1I GCGC 2 cut(s) 570, 837
HincII GTYRAC 2 cut(s) 546, 931
HindII GTYRAC 2 cut(s) 546, 931
HinfI GANTC 7 cut(s) 26, 99, 437, 547, 663, 1201, 1393
HphI GGTGA 5 cut(s) 199, 227, 446, 527, 1022
Hpy166II GTNNAC 6 cut(s) 459, 546, 641, 888, 931, 1177
Hpy188I TCNGA 9 cut(s) 119, 124, 150, 298, 528, 596, 833, 975, 1259
Hpy188III TCNNGA 9 cut(s) 76, 103, 331, 444, 446, 551, 716, 760, 1205
Hpy8I GTNNAC 6 cut(s) 459, 546, 641, 888, 931, 1177
Hpy99I CGWCG 3 cut(s) 596, 671, 1285
HpyAV CCTTC 3 cut(s) 355, 1001, 1202
HpyCH4III ACNGT 5 cut(s) 380, 645, 986, 1186, 1224
HpyCH4IV ACGT 3 cut(s) 633, 1080, 1128
HpyCH4V TGCA 9 cut(s) 41, 92, 202, 283, 683, 967, 1253, 1361, 1372
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 578, 1282, 1358
HpyF3I CTNAG 2 cut(s) 295, 321
HpySE526I ACGT 3 cut(s) 633, 1080, 1128
HspAI GCGC 2 cut(s) 570, 837
KpnI GGTACC 1 cut(s) 294
Kzo9I GATC 8 cut(s) 119, 474, 478, 503, 507, 598, 1097, 1231
LguI GCTCTTC 1 cut(s) 560
LmnI GCTCC 2 cut(s) 193, 1174
Lsp1109I GCAGC 1 cut(s) 20
LweI GCATC 2 cut(s) 848, 1348
MaeI CTAG 3 cut(s) 18, 395, 908
MaeII ACGT 3 cut(s) 633, 1080, 1128
MaeIII GTNAC 8 cut(s) 13, 179, 215, 250, 748, 866, 1129, 1139
MalI GATC 8 cut(s) 121, 476, 480, 505, 509, 600, 1099, 1233
MboI GATC 8 cut(s) 119, 474, 478, 503, 507, 598, 1097, 1231
MboII GAAGA 3 cut(s) 577, 761, 1444
MflI RGATCY 2 cut(s) 598, 1231
MhlI GDGCHC 1 cut(s) 558
MlsI TGGCCA 1 cut(s) 1077
MluCI AATT 8 cut(s) 42, 423, 449, 484, 720, 917, 1243, 1449
MluNI TGGCCA 1 cut(s) 1077
MlyI GAGTC 2 cut(s) 35, 541
MmeI TCCRAC 2 cut(s) 574, 1168
MnlI CCTC 9 cut(s) 64, 156, 304, 477, 808, 825, 903, 985, 1190
Mox20I TGGCCA 1 cut(s) 1077
Mph1103I ATGCAT 2 cut(s) 969, 1363
MscI TGGCCA 1 cut(s) 1077
MseI TTAA 1 cut(s) 534
MslI CAYNNNNRTG 4 cut(s) 697, 854, 1083, 1089
Msp20I TGGCCA 1 cut(s) 1077
MspA1I CMGCKG 2 cut(s) 11, 775
MspR9I CCNGG 2 cut(s) 212, 267
Mva1269I GAATGC 4 cut(s) 94, 1253, 1276, 1361
MvaI CCWGG 2 cut(s) 212, 267
MvnI CGCG 2 cut(s) 65, 837
MwoI GCNNNNNNNGC 4 cut(s) 38, 578, 1282, 1358
NdeII GATC 8 cut(s) 119, 474, 478, 503, 507, 598, 1097, 1231
NlaIV GGNNCC 2 cut(s) 292, 1325
NmuCI GTSAC 1 cut(s) 215
NsiI ATGCAT 2 cut(s) 969, 1363
NspI RCATGY 4 cut(s) 733, 782, 971, 1021
PaeI GCATGC 2 cut(s) 782, 1021
PaeR7I CTCGAG 1 cut(s) 444
PagI TCATGA 2 cut(s) 330, 715
PasI CCCWGGG 1 cut(s) 211
PciSI GCTCTTC 1 cut(s) 560
PcsI WCGNNNNNNNCGW 1 cut(s) 101
PctI GAATGC 4 cut(s) 94, 1253, 1276, 1361
PfeI GAWTC 5 cut(s) 99, 437, 663, 1201, 1393
PkrI GCNGC 2 cut(s) 10, 777
PleI GAGTC 2 cut(s) 34, 541
PpsI GAGTC 2 cut(s) 34, 541
PsiI TTATAA 1 cut(s) 357
Psp6I CCWGG 2 cut(s) 210, 265
PspEI GGTNACC 2 cut(s) 250, 1139
PspGI CCWGG 2 cut(s) 210, 265
PspN4I GGNNCC 2 cut(s) 292, 1325
PstNI CAGNNNCTG 1 cut(s) 1172
PsuI RGATCY 2 cut(s) 598, 1231
RsaI GTAC 7 cut(s) 109, 292, 413, 679, 887, 1148, 1155
RsaNI GTAC 7 cut(s) 108, 291, 412, 678, 886, 1147, 1154
RseI CAYNNNNRTG 4 cut(s) 697, 854, 1083, 1089
SalI GTCGAC 1 cut(s) 544
SapI GCTCTTC 1 cut(s) 560
SaqAI TTAA 1 cut(s) 534
SatI GCNGC 2 cut(s) 9, 776
Sau3AI GATC 8 cut(s) 119, 474, 478, 503, 507, 598, 1097, 1231
ScaI AGTACT 3 cut(s) 109, 413, 679
SchI GAGTC 2 cut(s) 35, 541
ScrFI CCNGG 2 cut(s) 212, 267
SduI GDGCHC 1 cut(s) 558
SfaNI GCATC 2 cut(s) 848, 1348
Sfr274I CTCGAG 1 cut(s) 444
SlaI CTCGAG 1 cut(s) 444
SmiMI CAYNNNNRTG 4 cut(s) 697, 854, 1083, 1089
SmlI CTYRAG 3 cut(s) 444, 551, 1286
SmoI CTYRAG 3 cut(s) 444, 551, 1286
SphI GCATGC 2 cut(s) 782, 1021
Sse9I AATT 8 cut(s) 42, 423, 449, 484, 720, 917, 1243, 1449
SsiI CCGC 6 cut(s) 11, 255, 707, 775, 1327, 1350
SspMI CTAG 3 cut(s) 18, 395, 908
StyD4I CCNGG 2 cut(s) 210, 265
StyI CCWWGG 2 cut(s) 173, 947
TaaI ACNGT 5 cut(s) 380, 645, 986, 1186, 1224
TaiI ACGT 3 cut(s) 636, 1083, 1131
TaqI TCGA 7 cut(s) 445, 477, 506, 545, 661, 669, 1280
TasI AATT 8 cut(s) 42, 423, 449, 484, 720, 917, 1243, 1449
TatI WGTACW 4 cut(s) 107, 411, 677, 885
TauI GCSGC 1 cut(s) 778
TfiI GAWTC 5 cut(s) 99, 437, 663, 1201, 1393
Tru1I TTAA 1 cut(s) 534
Tru9I TTAA 1 cut(s) 534
TscAI CASTG 3 cut(s) 383, 1032, 1359
TseFI GTSAC 1 cut(s) 215
TseI GCWGC 1 cut(s) 8
Tsp45I GTSAC 1 cut(s) 215
TspDTI ATGAA 5 cut(s) 95, 103, 429, 636, 732
TspGWI ACGGA 3 cut(s) 744, 777, 1209
TspRI CASTG 3 cut(s) 383, 1032, 1359
XapI RAATTY 2 cut(s) 449, 484
XceI RCATGY 4 cut(s) 733, 782, 971, 1021
XcmI CCANNNNNNNNNTGG 1 cut(s) 359
XhoI CTCGAG 1 cut(s) 444
XmiI GTMKAC 2 cut(s) 545, 1176
XspI CTAG 3 cut(s) 18, 395, 908
ZrmI AGTACT 3 cut(s) 109, 413, 679
Zsp2I ATGCAT 2 cut(s) 969, 1363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.