pycom15g14740

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
10098161 .. 10101285
3125 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g14740.4

Sequence Viewer

Length: 1458 bp
ATGACGGCAGCTGTTACTAGGACGGAGTCCACGCTGCTTCAAATTATTCTTACCTCCTTCGTCTTGTTGAGCGTTGTGAGGAGTGGGAATGCTGCAGGAATCACGAGTACTTTCATTCGATCTGATTATCCATCGGTTGACATCCCTCTGAACAATAAAGTATTTGCGGTGCCAAAGGGTTACAATGCTCCACAACAAGTGCATATCACCCAAGGTGACTATGATGGAAAGGCTGTAATCATCTCATGGGTTACGGCCAACGAACCAGGGGATAGTAAAGTGCAGTATGGTACATCAGAGAAAAAATACGAGTTTTCTGCTAAGGGTGTCGCGACAAACTACACCTTCTACCAGTATAAGTCTGGCTACATCCATCACTGTCTTGTTGATGGCCTAGAGTATGACACAAAGTACTATTACAAAATTGGAAATGGCGATTCATCTCGAGAATTTTGGTTTACAACACCTCCAAAGATCGATCCAAATTCTCATTACACATTTGGGATCATAGGTGATTTGGGTCAGACATTTAACTCTCTGTCAACTCTTGAGCACTACATGAAGAGTTCAGGACAGGCTGTTTTATTCGTTGGAGATCTTTCCTATGCTGATAGATATCAGTATAATGAAGTGGGTTTACGGTGGGACACATGGGGTCGATTCATCGAGCAAAGTACTGCGTATCAGCCATGGATGTGGTCTGCTGGCAATCATGAAATTGATTACATGCCTTATATGGGAGAAGTTACTCCGTTCAAGAACTATCTTCATCGGTATGCTATTCCTCATTTGGCCTCTAATAGTAGCAATCCTCTTTGGTATGCCATCAGACGTGCATCAGCTCATATAATCGTGTTGTCCAGTTACTCTCCATTTGTGAAGTACACGCCTCAATGGAGGTGGCTTGCAGAAGAATTGAAAAGGGTTGACAGGGAAAAGACACCTTGGCTCATAGTCCTTATGCATGTTCCATTATACAATAGTAACGACGTTCATTACATGGAAGGTGAAAGCATGCGAGCAGTGTTTGAGAGATGGTTCATTCAATACAAAGTTGATGTGGTGTTTGCTGGCCATGTCCATGCTTATGAGAGATCGTATCGAATCTCCAATATACGATACAACGTAACAAGCGGTTACCAGTACCCGATACCAGACAAATCGGCTCCTGTGTACATAACTGTTGGAGATGGAGGGAACCAAGAAGGACTTGCTGGAAGGTTTAGGAATCCACAACCAGATTATTCTGCGTTCCGAGAAGCCAGCTACGGGCATTCCACGCTTGAGCTTATAAACAGGACACACGCACTCTATCATTGGAACCGCAATGACGATGGGAAGAAAACCGCAATGGACACGTTTGTATTAGACAACCAGTACTGGAGTACGAATCACAGGAGGCGAAAACTGAAGAAGCATAATGTTAGGAAGACAATGGACGAAATTGCTATGTATTGA

Protein Analysis

486

Amino Acids

56.11

Weight (kDa)

8.65

Isoelectric Point (pI)

43.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1292
AccB1I GGYRCC 1 cut(s) 169
AccII CGCG 1 cut(s) 332
AciI CCGC 4 cut(s) 167, 1134, 1324, 1347
AclWI GGATC 2 cut(s) 473, 512
AcoI YGGCCR 2 cut(s) 255, 1072
AcsI RAATTY 2 cut(s) 449, 484
AcuI CTGAAG 1 cut(s) 1430
AfaI GTAC 9 cut(s) 109, 292, 413, 676, 884, 1145, 1175, 1379, 1387
AfiI CCNNNNNNNGG 2 cut(s) 737, 1269
AflIII ACRYGT 1 cut(s) 1356
AgsI TTSAA 4 cut(s) 41, 757, 919, 1046
AjiI CACGTC 1 cut(s) 833
AjnI CCWGG 1 cut(s) 265
AluBI AGCT 4 cut(s) 11, 842, 1266, 1288
AluI AGCT 4 cut(s) 11, 842, 1266, 1288
Alw21I GWGCWC 1 cut(s) 555
AlwI GGATC 2 cut(s) 473, 512
Ama87I CYCGRG 1 cut(s) 444
AoxI GGCC 4 cut(s) 255, 391, 792, 1072
ApeKI GCWGC 3 cut(s) 8, 34, 92
ApoI RAATTY 2 cut(s) 449, 484
AsuHPI GGTGA 4 cut(s) 199, 227, 524, 1019
AvaI CYCGRG 1 cut(s) 444
BalI TGGCCA 1 cut(s) 1074
BanI GGYRCC 1 cut(s) 169
BarI GAAGNNNNNNTAC 2 cut(s) 621, 653
BauI CACGAG 1 cut(s) 103
BbsI GAAGAC 1 cut(s) 1436
Bbv12I GWGCWC 1 cut(s) 555
BbvI GCAGC 3 cut(s) 20, 21, 79
BccI CCATC 8 cut(s) 139, 218, 381, 383, 833, 1029, 1184, 1328
BceAI ACGGC 2 cut(s) 21, 270
BcgI CGANNNNNNTGC 2 cut(s) 299, 333
BciT130I CCWGG 1 cut(s) 267
BfaI CTAG 2 cut(s) 18, 395
BfmI CTRYAG 1 cut(s) 93
BglII AGATCT 1 cut(s) 595
BisI GCNGC 3 cut(s) 9, 35, 93
BlsI GCNGC 3 cut(s) 10, 36, 94
BmcAI AGTACT 4 cut(s) 109, 413, 676, 1379
Bme1390I CCNGG 1 cut(s) 267
BmeT110I CYCGRG 1 cut(s) 444
BmgBI CACGTC 1 cut(s) 833
BmiI GGNNCC 4 cut(s) 171, 1167, 1199, 1322
BmrFI CCNGG 1 cut(s) 267
BmsI GCATC 1 cut(s) 845
BpiI GAAGAC 1 cut(s) 1436
BpmI CTGGAG 1 cut(s) 1402
Bpu10I CCTNAGC 1 cut(s) 321
BpuEI CTTGAG 2 cut(s) 569, 1304
Bsa29I ATCGAT 1 cut(s) 477
BsaBI GATNNNNATC 1 cut(s) 615
BsaJI CCNNGG 4 cut(s) 211, 266, 689, 944
BsaXI ACNNNNNCTCC 2 cut(s) 451, 481
Bsc4I CCNNNNNNNGG 2 cut(s) 737, 1269
Bse1I ACTGG 5 cut(s) 352, 861, 1141, 1375, 1385
Bse3DI GCAATG 2 cut(s) 1333, 1356
Bse8I GATNNNNATC 1 cut(s) 615
BseBI CCWGG 1 cut(s) 267
BseCI ATCGAT 1 cut(s) 477
BseDI CCNNGG 4 cut(s) 211, 266, 689, 944
BseGI GGATG 3 cut(s) 141, 369, 699
BseJI GATNNNNATC 1 cut(s) 615
BseLI CCNNNNNNNGG 2 cut(s) 737, 1269
BseMI GCAATG 2 cut(s) 1333, 1356
BseNI ACTGG 5 cut(s) 352, 861, 1141, 1375, 1385
BseRI GAGGAG 1 cut(s) 94
BseXI GCAGC 3 cut(s) 20, 21, 79
BsgI GTGCAG 1 cut(s) 302
Bsh1236I CGCG 1 cut(s) 332
BshFI GGCC 4 cut(s) 257, 393, 794, 1074
BshNI GGYRCC 1 cut(s) 169
BshVI ATCGAT 1 cut(s) 477
BsiHKAI GWGCWC 1 cut(s) 555
BsiHKCI CYCGRG 1 cut(s) 444
BslFI GGGAC 1 cut(s) 659
BslI CCNNNNNNNGG 2 cut(s) 737, 1269
BsmFI GGGAC 1 cut(s) 659
BsmI GAATGC 2 cut(s) 94, 1273
BsnI GGCC 4 cut(s) 257, 393, 794, 1074
BsoBI CYCGRG 1 cut(s) 444
Bsp1286I GDGCHC 1 cut(s) 555
Bsp1407I TGTACA 1 cut(s) 1173
Bsp143I GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
Bsp19I CCATGG 1 cut(s) 689
Bsp68I TCGCGA 1 cut(s) 332
BspACI CCGC 4 cut(s) 167, 1134, 1324, 1347
BspANI GGCC 4 cut(s) 257, 393, 794, 1074
BspDI ATCGAT 1 cut(s) 477
BspFNI CGCG 1 cut(s) 332
BspHI TCATGA 1 cut(s) 712
BspLI GGNNCC 4 cut(s) 171, 1167, 1199, 1322
BspMAI CTGCAG 1 cut(s) 97
BspPI GGATC 2 cut(s) 473, 512
BspT107I GGYRCC 1 cut(s) 169
BsrDI GCAATG 2 cut(s) 1333, 1356
BsrGI TGTACA 1 cut(s) 1173
BsrI ACTGG 5 cut(s) 352, 861, 1141, 1375, 1385
BssECI CCNNGG 4 cut(s) 211, 266, 689, 944
BssMI GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
BssSI CACGAG 1 cut(s) 103
BssT1I CCWWGG 3 cut(s) 211, 689, 944
Bst2BI CACGAG 1 cut(s) 103
Bst2UI CCWGG 1 cut(s) 267
Bst4CI ACNGT 3 cut(s) 380, 642, 1183
Bst6I CTCTTC 1 cut(s) 557
BstAUI TGTACA 1 cut(s) 1173
BstC8I GCNNGC 6 cut(s) 706, 906, 1016, 1020, 1072, 1264
BstDEI CTNAG 1 cut(s) 321
BstDSI CCRYGG 1 cut(s) 689
BstEII GGTNACC 1 cut(s) 1136
BstF5I GGATG 3 cut(s) 141, 369, 699
BstFNI CGCG 1 cut(s) 332
BstKTI GATC 6 cut(s) 122, 477, 481, 507, 598, 1097
BstMBI GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
BstMWI GCNNNNNNNGC 1 cut(s) 1279
BstNI CCWGG 1 cut(s) 267
BstNSI RCATGY 3 cut(s) 730, 968, 1018
BstPI GGTNACC 1 cut(s) 1136
BstSCI CCNGG 1 cut(s) 265
BstSFI CTRYAG 1 cut(s) 93
BstUI CGCG 1 cut(s) 332
BstV1I GCAGC 3 cut(s) 20, 21, 79
BstV2I GAAGAC 1 cut(s) 1436
BstX2I RGATCY 1 cut(s) 595
BstXI CCANNNNNNTGG 1 cut(s) 696
BstYI RGATCY 1 cut(s) 595
Bsu15I ATCGAT 1 cut(s) 477
BsuRI GGCC 4 cut(s) 257, 393, 794, 1074
BsuTUI ATCGAT 1 cut(s) 477
BtgI CCRYGG 1 cut(s) 689
BtrI CACGTC 1 cut(s) 833
BtsCI GGATG 3 cut(s) 141, 369, 699
BtsI GCAGTG 1 cut(s) 1029
BtsIMutI CAGTG 2 cut(s) 376, 1029
BtuMI TCGCGA 1 cut(s) 332
Cac8I GCNNGC 6 cut(s) 706, 906, 1016, 1020, 1072, 1264
CciI TCATGA 1 cut(s) 712
ClaI ATCGAT 1 cut(s) 477
Csp6I GTAC 9 cut(s) 108, 291, 412, 675, 883, 1144, 1174, 1378, 1386
CspCI CAANNNNNGTGG 2 cut(s) 881, 916
CviQI GTAC 9 cut(s) 108, 291, 412, 675, 883, 1144, 1174, 1378, 1386
DdeI CTNAG 1 cut(s) 321
DpnI GATC 6 cut(s) 121, 476, 480, 506, 597, 1096
DpnII GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
EaeI YGGCCR 2 cut(s) 255, 1072
Eam1104I CTCTTC 1 cut(s) 557
EarI CTCTTC 1 cut(s) 557
Eco130I CCWWGG 3 cut(s) 211, 689, 944
Eco32I GATATC 1 cut(s) 617
Eco57I CTGAAG 1 cut(s) 1430
Eco88I CYCGRG 1 cut(s) 444
Eco91I GGTNACC 1 cut(s) 1136
EcoO65I GGTNACC 1 cut(s) 1136
EcoRII CCWGG 1 cut(s) 265
EcoRV GATATC 1 cut(s) 617
EcoT14I CCWWGG 3 cut(s) 211, 689, 944
EcoT22I ATGCAT 1 cut(s) 966
ErhI CCWWGG 3 cut(s) 211, 689, 944
FalI AAGNNNNNCTT 2 cut(s) 1194, 1226
FaqI GGGAC 1 cut(s) 659
Fnu4HI GCNGC 3 cut(s) 9, 35, 93
FokI GGATG 3 cut(s) 128, 356, 706
Fsp4HI GCNGC 3 cut(s) 9, 35, 93
FspBI CTAG 2 cut(s) 18, 395
GluI GCNGC 3 cut(s) 9, 35, 93
GsuI CTGGAG 1 cut(s) 1402
HaeIII GGCC 4 cut(s) 257, 393, 794, 1074
HincII GTYRAC 3 cut(s) 139, 543, 928
HindII GTYRAC 3 cut(s) 139, 543, 928
HinfI GANTC 7 cut(s) 26, 99, 437, 660, 1104, 1228, 1390
HphI GGTGA 4 cut(s) 199, 227, 524, 1019
Hpy166II GTNNAC 8 cut(s) 30, 139, 459, 543, 638, 885, 928, 1174
Hpy188I TCNGA 6 cut(s) 124, 150, 298, 525, 830, 1256
Hpy188III TCNNGA 8 cut(s) 103, 331, 444, 446, 548, 570, 713, 757
Hpy8I GTNNAC 8 cut(s) 30, 139, 459, 543, 638, 885, 928, 1174
Hpy99I CGWCG 1 cut(s) 992
HpyAV CCTTC 5 cut(s) 67, 355, 998, 1199, 1212
HpyCH4III ACNGT 3 cut(s) 380, 642, 1183
HpyCH4IV ACGT 4 cut(s) 832, 990, 1125, 1358
HpyCH4V TGCA 6 cut(s) 95, 202, 283, 836, 908, 964
HpyF10VI GCNNNNNNNGC 1 cut(s) 1279
HpyF3I CTNAG 1 cut(s) 321
HpySE526I ACGT 4 cut(s) 832, 990, 1125, 1358
Kzo9I GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
LmnI GCTCC 2 cut(s) 193, 1171
Lsp1109I GCAGC 3 cut(s) 20, 21, 79
LweI GCATC 1 cut(s) 845
MaeI CTAG 2 cut(s) 18, 395
MaeII ACGT 4 cut(s) 832, 990, 1125, 1358
MaeIII GTNAC 9 cut(s) 13, 179, 215, 250, 745, 863, 983, 1126, 1136
MalI GATC 6 cut(s) 121, 476, 480, 506, 597, 1096
MboI GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
MboII GAAGA 6 cut(s) 574, 758, 923, 1351, 1423, 1441
MflI RGATCY 1 cut(s) 595
MhlI GDGCHC 1 cut(s) 555
MlsI TGGCCA 1 cut(s) 1074
MluCI AATT 7 cut(s) 42, 423, 449, 484, 717, 914, 1443
MluNI TGGCCA 1 cut(s) 1074
MlyI GAGTC 1 cut(s) 35
MmeI TCCRAC 2 cut(s) 571, 1165
Mox20I TGGCCA 1 cut(s) 1074
Mph1103I ATGCAT 1 cut(s) 966
MscI TGGCCA 1 cut(s) 1074
MseI TTAA 1 cut(s) 531
MslI CAYNNNNRTG 4 cut(s) 694, 774, 1080, 1086
Msp20I TGGCCA 1 cut(s) 1074
MspA1I CMGCKG 1 cut(s) 11
MspR9I CCNGG 1 cut(s) 267
Mva1269I GAATGC 2 cut(s) 94, 1273
MvaI CCWGG 1 cut(s) 267
MvnI CGCG 1 cut(s) 332
MwoI GCNNNNNNNGC 1 cut(s) 1279
NcoI CCATGG 1 cut(s) 689
NdeII GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
NlaIV GGNNCC 4 cut(s) 171, 1167, 1199, 1322
NmuCI GTSAC 1 cut(s) 215
NruI TCGCGA 1 cut(s) 332
NsiI ATGCAT 1 cut(s) 966
NspI RCATGY 3 cut(s) 730, 968, 1018
PaeI GCATGC 1 cut(s) 1018
PaeR7I CTCGAG 1 cut(s) 444
PagI TCATGA 1 cut(s) 712
PctI GAATGC 2 cut(s) 94, 1273
PfeI GAWTC 6 cut(s) 99, 437, 660, 1104, 1228, 1390
PflFI GACNNNGTC 1 cut(s) 25
PkrI GCNGC 3 cut(s) 10, 36, 94
PleI GAGTC 1 cut(s) 34
PpsI GAGTC 1 cut(s) 34
PsiI TTATAA 1 cut(s) 1292
Psp6I CCWGG 1 cut(s) 265
PspEI GGTNACC 1 cut(s) 1136
PspGI CCWGG 1 cut(s) 265
PspN4I GGNNCC 4 cut(s) 171, 1167, 1199, 1322
PstI CTGCAG 1 cut(s) 97
PsuI RGATCY 1 cut(s) 595
PsyI GACNNNGTC 1 cut(s) 25
PvuII CAGCTG 1 cut(s) 11
RruI TCGCGA 1 cut(s) 332
RsaI GTAC 9 cut(s) 109, 292, 413, 676, 884, 1145, 1175, 1379, 1387
RsaNI GTAC 9 cut(s) 108, 291, 412, 675, 883, 1144, 1174, 1378, 1386
RseI CAYNNNNRTG 4 cut(s) 694, 774, 1080, 1086
SaqAI TTAA 1 cut(s) 531
SatI GCNGC 3 cut(s) 9, 35, 93
Sau3AI GATC 6 cut(s) 119, 474, 478, 504, 595, 1094
ScaI AGTACT 4 cut(s) 109, 413, 676, 1379
SchI GAGTC 1 cut(s) 35
ScrFI CCNGG 1 cut(s) 267
SduI GDGCHC 1 cut(s) 555
SfaNI GCATC 1 cut(s) 845
SfcI CTRYAG 1 cut(s) 93
Sfr274I CTCGAG 1 cut(s) 444
SlaI CTCGAG 1 cut(s) 444
SmiMI CAYNNNNRTG 4 cut(s) 694, 774, 1080, 1086
SmlI CTYRAG 3 cut(s) 444, 548, 1283
SmoI CTYRAG 3 cut(s) 444, 548, 1283
SphI GCATGC 1 cut(s) 1018
Sse9I AATT 7 cut(s) 42, 423, 449, 484, 717, 914, 1443
SsiI CCGC 4 cut(s) 167, 1134, 1324, 1347
SspMI CTAG 2 cut(s) 18, 395
StyD4I CCNGG 1 cut(s) 265
StyI CCWWGG 3 cut(s) 211, 689, 944
TaaI ACNGT 3 cut(s) 380, 642, 1183
TaiI ACGT 4 cut(s) 835, 993, 1128, 1361
TaqI TCGA 6 cut(s) 118, 445, 477, 658, 666, 1102
TasI AATT 7 cut(s) 42, 423, 449, 484, 717, 914, 1443
TatI WGTACW 6 cut(s) 107, 411, 674, 882, 1173, 1377
TfiI GAWTC 6 cut(s) 99, 437, 660, 1104, 1228, 1390
Tru1I TTAA 1 cut(s) 531
Tru9I TTAA 1 cut(s) 531
TscAI CASTG 2 cut(s) 383, 1029
TseFI GTSAC 1 cut(s) 215
TseI GCWGC 3 cut(s) 8, 34, 92
Tsp45I GTSAC 1 cut(s) 215
TspDTI ATGAA 9 cut(s) 103, 429, 575, 642, 652, 729, 758, 983, 1030
TspGWI ACGGA 2 cut(s) 38, 741
TspRI CASTG 2 cut(s) 383, 1029
Tth111I GACNNNGTC 1 cut(s) 25
XapI RAATTY 2 cut(s) 449, 484
XceI RCATGY 3 cut(s) 730, 968, 1018
XcmI CCANNNNNNNNNTGG 1 cut(s) 359
XhoI CTCGAG 1 cut(s) 444
XspI CTAG 2 cut(s) 18, 395
ZrmI AGTACT 4 cut(s) 109, 413, 676, 1379
Zsp2I ATGCAT 1 cut(s) 966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.