Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010277

Physical Location & Seq

Genomic Coordinates Reverse (-)

21179753 .. 21184352

Gene Structure 4600 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G250300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGGCAGCAGTGATTAGGATGCACCCCATGTTGCTTCAACTCACTCTTACTTCTTTCGTCTTCTTGAGCTGTTTGAGGAACGGGAATGCGGGGATCACAAGCACTTTCATCCGATCCGAGTATCCATCCATGGATATCCCTCTTGATAATAAAGTATTTTCTGTTCCAAAGGGTCATAATGCTCCACAACAAGTGCATATCACCCAAGGTGACTATGATGGAAAAGCTGTTATCATCTCCTGGGTTACCCCTGATGAACCAGGGACGAGTAAAGTGCAATATGGTACATCAGAGAACGGATACGAGCTTTCTGCAGAGGGGATTGTGACAAACTACACATTCTACAAATACAAGTCTGGCTACATCCATCACTGTCTTGTTGATGGCCTAGAGCATGACACGAAGTACTATTACAAGATTGGGAGTGGCGATTCTTCTCGAGAATTTTGGTTTACAACACCTCCAAAGATTGACCCAAATTCTCGTTACACATTTGGGATCATAGGTGATTTGGGTCAGACATTTAACTCTCTATCAACTCTTGAGCATTACATGCAGAGTAAGGGACAGGCTGTTTTATTCCTTGGAGATCTTTCCTATGCTGACAGATATCAGTATAATGAAGTGGGTTTACGGTGGGACACATGGGGTCGATTCGTTGAGCAAAGTACTGCGTATCATCCATGGATTTGGTCTGCTGGCAATCATGAAATTGAGTTCATGCCTTATCTGGGAGAAGTTACTCCTTTCAAATCCTATCTTCAGCGGTATGCTACTCCTTATTTGGCCTCCAAAAGTAGCAATCCTCTTTGGTATGCCATCAGACGTGCATCGGCTCATATAATCGTACTGTCCAGTTATTCTCCATTTGTGAAATACACACCTCAATGGAGGTGGCTAGAAGAAGAATTGAAAAGGGTTGACAGGGAAAAAACACCTTGGCTCATAGTCCTTATGCATGTTCCAATCTACAATAGTAATGATGCTCATTACATGGAAGGTGAAAGCATGCGAGTAGTGTTTGAGAGTTGGTTCGTTCATTACAAAGTTGATGTAATCTTTGCTGGCCATGTCCATGCGTATGAGAGATCGTATAGAATCTCAAATATACACTACAACATAACAAGTGGTGACCAGAACCCCATACCAGACAAATCAGCTCCTGTATACATAACTGTTGGAGATGGAGGGAACCAAGAAGGACTTGCTGGAAGGTTTACAGATCCACAACCAGATTATTCTGCATTCCGAGAAGCCGCCTATGGACATTCTACGCTTGAGATTATAAACAGGACACATGCACTCTACCACTGGAACCGCAACGATGACGGGAAGAAAATTGCAACTGACGCATTTGTCTTACACAATCAGTACTGGGGTATGAATCGTAGGAGACGAAAACTGAAGAAGCATTATGTTAGGAAAAGTTTGGAGCAGGTCGCAATTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009505 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0030312 GO:0042578 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0048878 GO:0050801 GO:0055062 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0071944 GO:0072505 GO:0072506 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

484

Amino Acids

55.85

Weight (kDa)

7.36

Isoelectric Point (pI)

46.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010277)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G34850
fragaria_vesca	FvH4_1g02440 FvH4_1g02440
malus_domestica	MD02G1021200.v1.1 MD15G1164300.v1.1
prunus_persica	Prupe.7G250300_v2.0.a1 Prupe.7G250300_v2.0.a1 Prupe.7G250300_v2.0.a1
pyrus_communis	pycom02g01880 pycom15g14740
rosa_chinensis	RchiOBHm_Chr2g0087401
rosa_laevigata	RLG00000015863
rosa_multiflora	Rmu_sc0006064.1_g000007
rosa_roxburghii	Rroxscaffold_2G00153580
rosa_rugosa	Rorug01G0474900 Rorug01G0475000
rosa_samantha	Rh2AG028400 Rh2BG028300 Rh2CG028700 Rh2DG028500
rosa_wichuraiana	Rw2G002260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1286
AasI	GACNNNNNNGTC	1 cut(s)	1355
Acc36I	ACCTGC	1 cut(s)	1426
AccI	GTMKAC	1 cut(s)	1167
AciI	CCGC	4 cut(s)	89, 766, 1257, 1318
AclWI	GGATC	4 cut(s)	101, 108, 506, 1217
AcoI	YGGCCR	1 cut(s)	1066
AcsI	RAATTY	2 cut(s)	443, 478
AcuI	CTGAAG	2 cut(s)	746, 1424
AfaI	GTAC	5 cut(s)	286, 407, 670, 849, 1373
AfiI	CCNNNNNNNGG	1 cut(s)	731
AgsI	TTSAA	3 cut(s)	38, 751, 913
AjiI	CACGTC	1 cut(s)	827
AjnI	CCWGG	2 cut(s)	239, 259
AluBI	AGCT	4 cut(s)	69, 227, 307, 1160
AluI	AGCT	4 cut(s)	69, 227, 307, 1160
Alw26I	GTCTC	1 cut(s)	1387
AlwI	GGATC	4 cut(s)	101, 108, 506, 1217
AlwNI	CAGNNNCTG	1 cut(s)	1163
Ama87I	CYCGRG	1 cut(s)	438
AoxI	GGCC	3 cut(s)	385, 786, 1066
ApeKI	GCWGC	1 cut(s)	5
ApoI	RAATTY	2 cut(s)	443, 478
AsuHPI	GGTGA	5 cut(s)	193, 221, 518, 1013, 1142
AvaI	CYCGRG	1 cut(s)	438
BalI	TGGCCA	1 cut(s)	1068
BarI	GAAGNNNNNNTAC	4 cut(s)	395, 427, 615, 647
BbsI	GAAGAC	1 cut(s)	52
BbvI	GCAGC	1 cut(s)	17
BccI	CCATC	6 cut(s)	133, 212, 375, 377, 827, 1178
BcgI	CGANNNNNNTGC	4 cut(s)	256, 290, 293, 327
BciT130I	CCWGG	2 cut(s)	241, 261
BciVI	GTATCC	2 cut(s)	132, 293
BcoDI	GTCTC	1 cut(s)	1387
BfaI	CTAG	2 cut(s)	389, 899
BfmI	CTRYAG	1 cut(s)	312
BfuAI	ACCTGC	1 cut(s)	1426
BfuI	GTATCC	2 cut(s)	132, 293
BglII	AGATCT	1 cut(s)	589
BisI	GCNGC	2 cut(s)	6, 1257
BlsI	GCNGC	2 cut(s)	7, 1258
BmcAI	AGTACT	3 cut(s)	407, 670, 1373
Bme1390I	CCNGG	2 cut(s)	241, 261
BmeT110I	CYCGRG	1 cut(s)	438
BmgBI	CACGTC	1 cut(s)	827
BmiI	GGNNCC	2 cut(s)	1193, 1316
BmrFI	CCNGG	2 cut(s)	241, 261
BmrI	ACTGGG	1 cut(s)	1384
BmsI	GCATC	3 cut(s)	9, 839, 973
BmuI	ACTGGG	1 cut(s)	1384
BpiI	GAAGAC	1 cut(s)	52
BpuEI	CTTGAG	3 cut(s)	85, 563, 1298
BsaJI	CCNNGG	7 cut(s)	129, 205, 240, 260, 583, 683, 938
BsaXI	ACNNNNNCTCC	2 cut(s)	445, 475
Bsc4I	CCNNNNNNNGG	1 cut(s)	731
Bse1I	ACTGG	3 cut(s)	855, 1316, 1379
BseBI	CCWGG	2 cut(s)	241, 261
BseDI	CCNNGG	7 cut(s)	129, 205, 240, 260, 583, 683, 938
BseGI	GGATG	5 cut(s)	24, 108, 125, 363, 679
BseLI	CCNNNNNNNGG	1 cut(s)	731
BseNI	ACTGG	3 cut(s)	855, 1316, 1379
BseXI	GCAGC	1 cut(s)	17
BshFI	GGCC	3 cut(s)	387, 788, 1068
BsiHKCI	CYCGRG	1 cut(s)	438
BslFI	GGGAC	3 cut(s)	277, 579, 653
BslI	CCNNNNNNNGG	1 cut(s)	731
BsmAI	GTCTC	1 cut(s)	1387
BsmBI	CGTCTC	1 cut(s)	1387
BsmFI	GGGAC	3 cut(s)	277, 579, 653
BsmI	GAATGC	2 cut(s)	91, 1244
BsnI	GGCC	3 cut(s)	387, 788, 1068
BsoBI	CYCGRG	1 cut(s)	438
Bsp143I	GATC	6 cut(s)	93, 113, 498, 589, 1088, 1222
Bsp19I	CCATGG	2 cut(s)	129, 683
BspACI	CCGC	4 cut(s)	89, 766, 1257, 1318
BspANI	GGCC	3 cut(s)	387, 788, 1068
BspHI	TCATGA	1 cut(s)	706
BspLI	GGNNCC	2 cut(s)	1193, 1316
BspMAI	CTGCAG	1 cut(s)	316
BspMI	ACCTGC	1 cut(s)	1426
BspPI	GGATC	4 cut(s)	101, 108, 506, 1217
BsrI	ACTGG	3 cut(s)	855, 1316, 1379
BssECI	CCNNGG	7 cut(s)	129, 205, 240, 260, 583, 683, 938
BssMI	GATC	6 cut(s)	93, 113, 498, 589, 1088, 1222
BssNAI	GTATAC	1 cut(s)	1168
BssT1I	CCWWGG	5 cut(s)	129, 205, 583, 683, 938
Bst1107I	GTATAC	1 cut(s)	1168
Bst2UI	CCWGG	2 cut(s)	241, 261
Bst4CI	ACNGT	4 cut(s)	374, 636, 852, 1177
BstAPI	GCANNNNNTGC	1 cut(s)	553
BstC8I	GCNNGC	3 cut(s)	700, 1010, 1066
BstDSI	CCRYGG	2 cut(s)	129, 683
BstEII	GGTNACC	2 cut(s)	244, 1130
BstF5I	GGATG	5 cut(s)	24, 108, 125, 363, 679
BstKTI	GATC	6 cut(s)	96, 116, 501, 592, 1091, 1225
BstMAI	GTCTC	1 cut(s)	1387
BstMBI	GATC	6 cut(s)	93, 113, 498, 589, 1088, 1222
BstMWI	GCNNNNNNNGC	2 cut(s)	553, 1349
BstNI	CCWGG	2 cut(s)	241, 261
BstNSI	RCATGY	4 cut(s)	556, 962, 1012, 1301
BstPI	GGTNACC	2 cut(s)	244, 1130
BstSCI	CCNGG	2 cut(s)	239, 259
BstSFI	CTRYAG	1 cut(s)	312
BstV1I	GCAGC	1 cut(s)	17
BstV2I	GAAGAC	1 cut(s)	52
BstX2I	RGATCY	2 cut(s)	589, 1222
BstXI	CCANNNNNNTGG	1 cut(s)	690
BstYI	RGATCY	2 cut(s)	589, 1222
BstZ17I	GTATAC	1 cut(s)	1168
BsuI	GTATCC	2 cut(s)	132, 293
BsuRI	GGCC	3 cut(s)	387, 788, 1068
BtgI	CCRYGG	2 cut(s)	129, 683
BtrI	CACGTC	1 cut(s)	827
BtsCI	GGATG	5 cut(s)	24, 108, 125, 363, 679
BtsI	GCAGTG	1 cut(s)	15
BtsIMutI	CAGTG	3 cut(s)	15, 370, 1309
BveI	ACCTGC	1 cut(s)	1426
Cac8I	GCNNGC	3 cut(s)	700, 1010, 1066
CaiI	CAGNNNCTG	1 cut(s)	1163
CciI	TCATGA	1 cut(s)	706
CseI	GACGC	1 cut(s)	1358
Csp6I	GTAC	5 cut(s)	285, 406, 669, 848, 1372
CspCI	CAANNNNNGTGG	2 cut(s)	875, 910
CviQI	GTAC	5 cut(s)	285, 406, 669, 848, 1372
DpnI	GATC	6 cut(s)	95, 115, 500, 591, 1090, 1224
DpnII	GATC	6 cut(s)	93, 113, 498, 589, 1088, 1222
DrdI	GACNNNNNNGTC	1 cut(s)	1355
DseDI	GACNNNNNNGTC	1 cut(s)	1355
EaeI	YGGCCR	1 cut(s)	1066
Eco130I	CCWWGG	5 cut(s)	129, 205, 583, 683, 938
Eco32I	GATATC	2 cut(s)	136, 611
Eco57I	CTGAAG	2 cut(s)	746, 1424
Eco88I	CYCGRG	1 cut(s)	438
Eco91I	GGTNACC	2 cut(s)	244, 1130
EcoO65I	GGTNACC	2 cut(s)	244, 1130
EcoRII	CCWGG	2 cut(s)	239, 259
EcoRV	GATATC	2 cut(s)	136, 611
EcoT14I	CCWWGG	5 cut(s)	129, 205, 583, 683, 938
EcoT22I	ATGCAT	1 cut(s)	960
ErhI	CCWWGG	5 cut(s)	129, 205, 583, 683, 938
Esp3I	CGTCTC	1 cut(s)	1387
FalI	AAGNNNNNCTT	2 cut(s)	1188, 1220
FaqI	GGGAC	3 cut(s)	277, 579, 653
FauI	CCCGC	1 cut(s)	82
FblI	GTMKAC	1 cut(s)	1167
Fnu4HI	GCNGC	2 cut(s)	6, 1257
FokI	GGATG	5 cut(s)	31, 95, 112, 350, 666
Fsp4HI	GCNGC	2 cut(s)	6, 1257
FspBI	CTAG	2 cut(s)	389, 899
GluI	GCNGC	2 cut(s)	6, 1257
HaeIII	GGCC	3 cut(s)	387, 788, 1068
HgaI	GACGC	1 cut(s)	1358
HincII	GTYRAC	1 cut(s)	922
HindII	GTYRAC	1 cut(s)	922
HinfI	GANTC	4 cut(s)	431, 654, 1098, 1384
HphI	GGTGA	5 cut(s)	193, 221, 518, 1013, 1142
Hpy166II	GTNNAC	5 cut(s)	453, 632, 922, 1168, 1218
Hpy188I	TCNGA	6 cut(s)	113, 118, 292, 519, 824, 1250
Hpy188III	TCNNGA	6 cut(s)	64, 143, 438, 440, 542, 707
Hpy8I	GTNNAC	5 cut(s)	453, 632, 922, 1168, 1218
HpyAV	CCTTC	3 cut(s)	992, 1193, 1206
HpyCH4III	ACNGT	4 cut(s)	374, 636, 852, 1177
HpyCH4IV	ACGT	1 cut(s)	826
HpyF10VI	GCNNNNNNNGC	2 cut(s)	553, 1349
HpySE526I	ACGT	1 cut(s)	826
Kzo9I	GATC	6 cut(s)	93, 113, 498, 589, 1088, 1222
LmnI	GCTCC	3 cut(s)	187, 1165, 1432
Lsp1109I	GCAGC	1 cut(s)	17
LweI	GCATC	3 cut(s)	9, 839, 973
MaeI	CTAG	2 cut(s)	389, 899
MaeII	ACGT	1 cut(s)	826
MaeIII	GTNAC	6 cut(s)	209, 244, 325, 485, 739, 1130
MalI	GATC	6 cut(s)	95, 115, 500, 591, 1090, 1224
MboI	GATC	6 cut(s)	93, 113, 498, 589, 1088, 1222
MboII	GAAGA	7 cut(s)	52, 426, 752, 914, 917, 1345, 1417
MflI	RGATCY	2 cut(s)	589, 1222
MlsI	TGGCCA	1 cut(s)	1068
MluCI	AATT	6 cut(s)	443, 478, 711, 908, 1338, 1443
MluNI	TGGCCA	1 cut(s)	1068
MmeI	TCCRAC	1 cut(s)	1159
MnlI	CCTC	9 cut(s)	69, 150, 310, 471, 799, 816, 885, 894, 1181
Mox20I	TGGCCA	1 cut(s)	1068
Mph1103I	ATGCAT	1 cut(s)	960
MscI	TGGCCA	1 cut(s)	1068
MseI	TTAA	1 cut(s)	525
MslI	CAYNNNNRTG	3 cut(s)	886, 1074, 1080
Msp20I	TGGCCA	1 cut(s)	1068
MspA1I	CMGCKG	1 cut(s)	766
MspR9I	CCNGG	2 cut(s)	241, 261
Mva1269I	GAATGC	2 cut(s)	91, 1244
MvaI	CCWGG	2 cut(s)	241, 261
MwoI	GCNNNNNNNGC	2 cut(s)	553, 1349
NcoI	CCATGG	2 cut(s)	129, 683
NdeII	GATC	6 cut(s)	93, 113, 498, 589, 1088, 1222
NlaIV	GGNNCC	2 cut(s)	1193, 1316
NmuCI	GTSAC	3 cut(s)	209, 325, 1130
NsiI	ATGCAT	1 cut(s)	960
NspI	RCATGY	4 cut(s)	556, 962, 1012, 1301
PaeI	GCATGC	1 cut(s)	1012
PaeR7I	CTCGAG	1 cut(s)	438
PagI	TCATGA	1 cut(s)	706
PcsI	WCGNNNNNNNCGW	1 cut(s)	1393
PctI	GAATGC	2 cut(s)	91, 1244
PfeI	GAWTC	4 cut(s)	431, 654, 1098, 1384
PkrI	GCNGC	2 cut(s)	7, 1258
PsiI	TTATAA	1 cut(s)	1286
Psp6I	CCWGG	2 cut(s)	239, 259
PspEI	GGTNACC	2 cut(s)	244, 1130
PspGI	CCWGG	2 cut(s)	239, 259
PspN4I	GGNNCC	2 cut(s)	1193, 1316
PsrI	GAACNNNNNNTAC	2 cut(s)	147, 179
PstI	CTGCAG	1 cut(s)	316
PstNI	CAGNNNCTG	1 cut(s)	1163
PsuI	RGATCY	2 cut(s)	589, 1222
RsaI	GTAC	5 cut(s)	286, 407, 670, 849, 1373
RsaNI	GTAC	5 cut(s)	285, 406, 669, 848, 1372
RseI	CAYNNNNRTG	3 cut(s)	886, 1074, 1080
SaqAI	TTAA	1 cut(s)	525
SatI	GCNGC	2 cut(s)	6, 1257
Sau3AI	GATC	6 cut(s)	93, 113, 498, 589, 1088, 1222
ScaI	AGTACT	3 cut(s)	407, 670, 1373
ScrFI	CCNGG	2 cut(s)	241, 261
SfaNI	GCATC	3 cut(s)	9, 839, 973
SfcI	CTRYAG	1 cut(s)	312
Sfr274I	CTCGAG	1 cut(s)	438
SlaI	CTCGAG	1 cut(s)	438
SmiMI	CAYNNNNRTG	3 cut(s)	886, 1074, 1080
SmlI	CTYRAG	4 cut(s)	64, 438, 542, 1277
SmoI	CTYRAG	4 cut(s)	64, 438, 542, 1277
SphI	GCATGC	1 cut(s)	1012
Sse9I	AATT	6 cut(s)	443, 478, 711, 908, 1338, 1443
SsiI	CCGC	4 cut(s)	89, 766, 1257, 1318
SspMI	CTAG	2 cut(s)	389, 899
StyD4I	CCNGG	2 cut(s)	239, 259
StyI	CCWWGG	5 cut(s)	129, 205, 583, 683, 938
TaaI	ACNGT	4 cut(s)	374, 636, 852, 1177
TaiI	ACGT	1 cut(s)	829
TaqI	TCGA	2 cut(s)	439, 652
TasI	AATT	6 cut(s)	443, 478, 711, 908, 1338, 1443
TatI	WGTACW	3 cut(s)	405, 668, 1371
TauI	GCSGC	1 cut(s)	1259
TfiI	GAWTC	4 cut(s)	431, 654, 1098, 1384
Tru1I	TTAA	1 cut(s)	525
Tru9I	TTAA	1 cut(s)	525
TscAI	CASTG	3 cut(s)	15, 377, 1316
TseFI	GTSAC	3 cut(s)	209, 325, 1130
TseI	GCWGC	1 cut(s)	5
Tsp45I	GTSAC	3 cut(s)	209, 325, 1130
TspDTI	ATGAA	7 cut(s)	97, 270, 636, 709, 723, 1028, 1397
TspGWI	ACGGA	1 cut(s)	312
TspRI	CASTG	3 cut(s)	15, 377, 1316
XapI	RAATTY	2 cut(s)	443, 478
XceI	RCATGY	4 cut(s)	556, 962, 1012, 1301
XhoI	CTCGAG	1 cut(s)	438
XmiI	GTMKAC	1 cut(s)	1167
XspI	CTAG	2 cut(s)	389, 899
ZrmI	AGTACT	3 cut(s)	407, 670, 1373
Zsp2I	ATGCAT	1 cut(s)	960

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.