MD02G1085400.v1.1

Hydroxyproline-rich glycoprotein family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0012501
Physical Location & Seq
Forward (+)
6695543 .. 6697258
1716 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1085400.v1.1.491

Sequence Viewer

Length: 1716 bp
ATGCCTCCCCGCCGCTCACCGTCGCCGCTTCTAAGTTCACCGTTGCTCATCATCCTGTTCCCCATTATCGTCTCCATCATCCTCTTCTACGCCATCCCTCAATTCCTCTCCTTCACCTCTCAACTACTCCGCCCCACCATTTCCGTCAAGAAAAGTTGGGACTCCCTCAACGTGTTTCTCGTCATTTTCGCAATCCTATGCGGCGTCTTCGCCAAGCTAAACGACGACGCATCATCCTCTGAAGAAGATCGCATTCCCGACACTAATTTTCCGCACCCCTTGGACAACATTCGTACAAACAGAGCCAACATATCGGAATCGGAATCGGAATCAGCTGCATCCCTACTTCCGCAACAATGGTTTGGATATTCAAATAGCAGGACGCCTGAATCCGGCGGCGACCGGTTGAGGAGGAGCAGCAGCTCCTACCCGGATCTGAGGCCACTCGGGCAGGACTCGGTGTGGGAAACTCGGGATCACAACAAGTCGCAGTTTCCCTTTTTCGACGACTTCGAAATCGGCGATTACCATCGTGTCCCGCCAGTTTCACACCAACGGCGACCCAAGGAGTACTCTGATGTAATTAAGGAGATTCCGGTGGATACTTTTTTGCTTCACTCTTCTCCTCCGCTGCCATCCAAGCCTTCGACGCCACCACCTCCGCCTCGTAATCAGAAACCGAGGAGGACGTATCAGACTGTTGGACGGAGAGATCAAAAGACAGAGAAAGCAGTTAATAAAAATGTTATTAATGAGGCTGAGGAGTTGGAGAAAGTTCGAACTCCGCCACCGACGCCGCCGCCTCCGCCGCCACGTCCGGCCGCGCCGCCGTCACCAATTCGGATTAGATCAGACCCGAAGCGTAGAAAGAGCAATGTGAAGAAGGAGATAGCGATGGTTTGGGCTTCGGTTCTGTCTAACCAGAAAAAGAGGAAGAAGCAGCACAAGGTCACGGGTACCAGAAACTTTTACGAAACCGCTGCTTCTCCGCCTGAACACGAACAAGAAGACCGAGAAGGGGAATATTTTTTCACAAGACAGCCACCATCCCCACCTCCTCCACCGCCCCCTCCGCCGCCGCCACATTCTGTGTTTCACAATATATTCAAAAAGGGAATGAGCAAAACTAAGAAAGTTCACTCCGTCTTGACGCCTCCGACTCCGCCACCACCGCCACCGCGGCCGGCATTGCTAAAACACAAGAGTTGGAATACTAGTTTCCCGCTGGCACCACCAACTCCGCCTAAACAACCGCCTCCGGCTACTTCCCGGCCGCGACACTCCGCCTCCAGTGGCCGGCCCCCGTTGCCAACAAAGGCGAACAGTTATTTACACGATGGGAATGTGAATAGCGGCTGCCGGAGTCCGTTAATTCCTGCGGCGCCTCCACCACCTCCACCGTTTAAAATGCCAGAGCTGAAGTTTTTTGTGCGCGGGGATTTTGTTAAGATACAGAGCGCGCAGAGCTCGCGCTGTGGATCTCCTGAACTGGAGGACGTTGACGACGTTGATGCATCTCCACGTAAGGAAGAAGACATGAAGTCAAAGTCAGAAGTACAGAGTAAAGTCAACGCGATGGACGGCGGCGGCGGATCCTCCGTGTTCTGCCCTAGCCCAGATGTTAATACGAAAGCTGATAACTTCATTGCTAGGCTGAAAGATGAGTGGAGGCTTGAGAAGATGAACTCAATGAGGCAGAAAAAGAAGATGCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231
Pfam Domains
Protein Families
DUF761

Protein Analysis

572

Amino Acids

63.99

Weight (kDa)

9.81

Isoelectric Point (pI)

80.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF761 PF05553 539 - 570 3.5e-06 Cotton fibre expressed protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 956
AccB1I GGYRCC 3 cut(s) 956, 1228, 1381
AccBSI CCGCTC 1 cut(s) 15
AccII CGCG 7 cut(s) 824, 1180, 1276, 1434, 1460, 1471, 1574
AclWI GGATC 5 cut(s) 441, 483, 1486, 1587, 1600
AcoI YGGCCR 4 cut(s) 819, 1181, 1271, 1294
AcuI CTGAAG 2 cut(s) 261, 1439
AcyI GRCGYC 6 cut(s) 204, 383, 650, 794, 1151, 1382
AfaI GTAC 4 cut(s) 295, 572, 958, 1557
AfiI CCNNNNNNNGG 3 cut(s) 392, 1018, 1296
AflIII ACRYGT 1 cut(s) 171
AgeI ACCGGT 1 cut(s) 402
AgsI TTSAA 2 cut(s) 372, 1108
AhdI GACNNNNNGTC 1 cut(s) 1540
AhlI ACTAGT 1 cut(s) 1214
AjiI CACGTC 1 cut(s) 815
AluBI AGCT 6 cut(s) 217, 335, 423, 1417, 1467, 1634
AluI AGCT 6 cut(s) 217, 335, 423, 1417, 1467, 1634
Alw21I GWGCWC 1 cut(s) 1469
Alw26I GTCTC 1 cut(s) 76
AlwI GGATC 5 cut(s) 441, 483, 1486, 1587, 1600
Ama87I CYCGRG 2 cut(s) 446, 471
AoxI GGCC 6 cut(s) 440, 819, 1181, 1271, 1294, 1298
ApeKI GCWGC 7 cut(s) 335, 417, 420, 631, 940, 980, 1356
AseI ATTAAT 1 cut(s) 750
AsiGI ACCGGT 1 cut(s) 402
Asp718I GGTACC 1 cut(s) 956
AspLEI GCGC 6 cut(s) 826, 1384, 1434, 1460, 1462, 1473
AspS9I GGNCC 1 cut(s) 1299
AsuC2I CCSGG 2 cut(s) 431, 1270
AsuHPI GGTGA 4 cut(s) 9, 30, 106, 825
AsuII TTCGAA 2 cut(s) 513, 778
AvaI CYCGRG 2 cut(s) 446, 471
BamHI GGATCC 1 cut(s) 1592
BanI GGYRCC 3 cut(s) 956, 1228, 1381
BanII GRGCYC 1 cut(s) 1469
BbsI GAAGAC 3 cut(s) 199, 1014, 1539
Bbv12I GWGCWC 1 cut(s) 1469
BbvCI CCTCAGC 1 cut(s) 759
BbvI GCAGC 7 cut(s) 322, 429, 432, 618, 952, 967, 1343
BccI CCATC 8 cut(s) 83, 101, 537, 643, 889, 1054, 1331, 1570
BceAI ACGGC 3 cut(s) 572, 814, 1597
BcgI CGANNNNNNTGC 4 cut(s) 962, 996, 1493, 1527
BciVI GTATCC 1 cut(s) 595
BcnI CCSGG 2 cut(s) 431, 1270
BcoDI GTCTC 1 cut(s) 76
BcuI ACTAGT 1 cut(s) 1214
BfaI CTAG 3 cut(s) 1215, 1611, 1650
BfoI RGCGCY 1 cut(s) 1385
BfuI GTATCC 1 cut(s) 595
BglI GCCNNNNNGGC 2 cut(s) 448, 1180
BmcAI AGTACT 1 cut(s) 572
Bme1390I CCNGG 2 cut(s) 431, 1270
BmeRI GACNNNNNGTC 1 cut(s) 1540
BmeT110I CYCGRG 2 cut(s) 446, 471
BmgBI CACGTC 1 cut(s) 815
BmgT120I GGNCC 1 cut(s) 1299
BmiI GGNNCC 5 cut(s) 958, 1230, 1301, 1383, 1594
BmrFI CCNGG 2 cut(s) 431, 1270
BmsI GCATC 5 cut(s) 239, 347, 1501, 1523, 1698
BpiI GAAGAC 3 cut(s) 199, 1014, 1539
BpmI CTGGAG 2 cut(s) 1273, 1511
Bpu10I CCTNAGC 1 cut(s) 759
Bpu14I TTCGAA 2 cut(s) 513, 778
BpuEI CTTGAG 1 cut(s) 1694
BpuMI CCSGG 2 cut(s) 431, 1270
BsaAI YACGTR 1 cut(s) 1523
BsaBI GATNNNNATC 1 cut(s) 528
BsaHI GRCGYC 6 cut(s) 204, 383, 650, 794, 1151, 1382
BsaJI CCNNGG 4 cut(s) 279, 564, 680, 1178
BsaWI WCCGGW 2 cut(s) 402, 595
BsaXI ACNNNNNCTCC 2 cut(s) 1271, 1301
Bsc4I CCNNNNNNNGG 3 cut(s) 392, 1018, 1296
Bse118I RCCGGY 3 cut(s) 402, 1183, 1296
Bse1I ACTGG 3 cut(s) 542, 1290, 1494
Bse3DI GCAATG 3 cut(s) 880, 1187, 1644
Bse8I GATNNNNATC 1 cut(s) 528
BseDI CCNNGG 4 cut(s) 279, 564, 680, 1178
BseGI GGATG 7 cut(s) 51, 78, 93, 233, 338, 635, 1046
BseJI GATNNNNATC 1 cut(s) 528
BseLI CCNNNNNNNGG 3 cut(s) 392, 1018, 1296
BseMI GCAATG 3 cut(s) 880, 1187, 1644
BseMII CTCAG 2 cut(s) 428, 750
BseNI ACTGG 3 cut(s) 542, 1290, 1494
BsePI GCGCGC 1 cut(s) 1458
BseRI GAGGAG 6 cut(s) 424, 427, 615, 697, 776, 1047
BseX3I CGGCCG 3 cut(s) 819, 1181, 1271
BseXI GCAGC 7 cut(s) 322, 429, 432, 618, 952, 967, 1343
Bsh1236I CGCG 7 cut(s) 824, 1180, 1276, 1434, 1460, 1471, 1574
Bsh1285I CGRYCG 4 cut(s) 403, 822, 1184, 1274
BshFI GGCC 6 cut(s) 442, 821, 1183, 1273, 1296, 1300
BshNI GGYRCC 3 cut(s) 956, 1228, 1381
BshTI ACCGGT 1 cut(s) 402
BsiEI CGRYCG 4 cut(s) 403, 822, 1184, 1274
BsiHKAI GWGCWC 1 cut(s) 1469
BsiHKCI CYCGRG 2 cut(s) 446, 471
BslFI GGGAC 2 cut(s) 173, 521
BslI CCNNNNNNNGG 3 cut(s) 392, 1018, 1296
BsmAI GTCTC 1 cut(s) 76
BsmBI CGTCTC 1 cut(s) 76
BsmFI GGGAC 2 cut(s) 173, 521
BsmI GAATGC 1 cut(s) 252
BsnI GGCC 6 cut(s) 442, 821, 1183, 1273, 1296, 1300
BsoBI CYCGRG 2 cut(s) 446, 471
Bsp119I TTCGAA 2 cut(s) 513, 778
Bsp1286I GDGCHC 1 cut(s) 1469
Bsp143I GATC 7 cut(s) 247, 433, 475, 712, 848, 1478, 1592
BspANI GGCC 6 cut(s) 442, 821, 1183, 1273, 1296, 1300
BspCNI CTCAG 2 cut(s) 429, 751
BspFNI CGCG 7 cut(s) 824, 1180, 1276, 1434, 1460, 1471, 1574
BspLI GGNNCC 5 cut(s) 958, 1230, 1301, 1383, 1594
BspPI GGATC 5 cut(s) 441, 483, 1486, 1587, 1600
BspT104I TTCGAA 2 cut(s) 513, 778
BspT107I GGYRCC 3 cut(s) 956, 1228, 1381
BsrBI CCGCTC 1 cut(s) 15
BsrDI GCAATG 3 cut(s) 880, 1187, 1644
BsrFI RCCGGY 3 cut(s) 402, 1183, 1296
BsrI ACTGG 3 cut(s) 542, 1290, 1494
BssAI RCCGGY 3 cut(s) 402, 1183, 1296
BssECI CCNNGG 4 cut(s) 279, 564, 680, 1178
BssHII GCGCGC 1 cut(s) 1458
BssMI GATC 7 cut(s) 247, 433, 475, 712, 848, 1478, 1592
BssNI GRCGYC 6 cut(s) 204, 383, 650, 794, 1151, 1382
BssT1I CCWWGG 2 cut(s) 279, 564
Bst4CI ACNGT 5 cut(s) 21, 42, 700, 1325, 1401
Bst6I CTCTTC 2 cut(s) 89, 625
BstACI GRCGYC 6 cut(s) 204, 383, 650, 794, 1151, 1382
BstBAI YACGTR 1 cut(s) 1523
BstBI TTCGAA 2 cut(s) 513, 778
BstC8I GCNNGC 5 cut(s) 1185, 1227, 1298, 1460, 1469
BstDEI CTNAG 4 cut(s) 32, 437, 759, 1128
BstDSI CCRYGG 1 cut(s) 1178
BstF5I GGATG 7 cut(s) 51, 78, 93, 233, 338, 635, 1046
BstFNI CGCG 7 cut(s) 824, 1180, 1276, 1434, 1460, 1471, 1574
BstH2I RGCGCY 1 cut(s) 1385
BstHHI GCGC 6 cut(s) 826, 1384, 1434, 1460, 1462, 1473
BstKTI GATC 7 cut(s) 250, 436, 478, 715, 851, 1481, 1595
BstMAI GTCTC 1 cut(s) 76
BstMBI GATC 7 cut(s) 247, 433, 475, 712, 848, 1478, 1592
BstMCI CGRYCG 4 cut(s) 403, 822, 1184, 1274
BstSCI CCNGG 2 cut(s) 429, 1268
BstUI CGCG 7 cut(s) 824, 1180, 1276, 1434, 1460, 1471, 1574
BstV1I GCAGC 7 cut(s) 322, 429, 432, 618, 952, 967, 1343
BstV2I GAAGAC 3 cut(s) 199, 1014, 1539
BstX2I RGATCY 3 cut(s) 433, 1478, 1592
BstYI RGATCY 3 cut(s) 433, 1478, 1592
BstZI CGGCCG 3 cut(s) 819, 1181, 1271
BsuI GTATCC 1 cut(s) 595
BsuRI GGCC 6 cut(s) 442, 821, 1183, 1273, 1296, 1300
BtgI CCRYGG 1 cut(s) 1178
BtgZI GCGATG 2 cut(s) 908, 1589
BtrI CACGTC 1 cut(s) 815
BtsCI GGATG 7 cut(s) 51, 78, 93, 233, 338, 635, 1046
BtsIMutI CAGTG 1 cut(s) 1297
Cac8I GCNNGC 5 cut(s) 1185, 1227, 1298, 1460, 1469
CfoI GCGC 6 cut(s) 826, 1384, 1434, 1460, 1462, 1473
Cfr10I RCCGGY 3 cut(s) 402, 1183, 1296
Cfr13I GGNCC 1 cut(s) 1299
Cfr42I CCGCGG 1 cut(s) 1181
CseI GACGC 6 cut(s) 193, 236, 391, 658, 802, 1159
Csp6I GTAC 4 cut(s) 294, 571, 957, 1556
CspAI ACCGGT 1 cut(s) 402
CviAII CATG 1 cut(s) 1537
CviQI GTAC 4 cut(s) 294, 571, 957, 1556
DdeI CTNAG 4 cut(s) 32, 437, 759, 1128
DinI GGCGCC 1 cut(s) 1383
DpnI GATC 7 cut(s) 249, 435, 477, 714, 850, 1480, 1594
DpnII GATC 7 cut(s) 247, 433, 475, 712, 848, 1478, 1592
DraI TTTAAA 1 cut(s) 1405
DriI GACNNNNNGTC 1 cut(s) 1540
EaeI YGGCCR 4 cut(s) 819, 1181, 1271, 1294
EagI CGGCCG 3 cut(s) 819, 1181, 1271
Eam1104I CTCTTC 2 cut(s) 89, 625
Eam1105I GACNNNNNGTC 1 cut(s) 1540
EarI CTCTTC 2 cut(s) 89, 625
Ecl136II GAGCTC 1 cut(s) 1467
EclXI CGGCCG 3 cut(s) 819, 1181, 1271
Eco130I CCWWGG 2 cut(s) 279, 564
Eco24I GRGCYC 1 cut(s) 1469
Eco52I CGGCCG 3 cut(s) 819, 1181, 1271
Eco53kI GAGCTC 1 cut(s) 1467
Eco57I CTGAAG 2 cut(s) 261, 1439
Eco88I CYCGRG 2 cut(s) 446, 471
EcoICRI GAGCTC 1 cut(s) 1467
EcoT14I CCWWGG 2 cut(s) 279, 564
EcoT22I ATGCAT 1 cut(s) 1516
EcoT38I GRGCYC 1 cut(s) 1469
EgeI GGCGCC 1 cut(s) 1383
EheI GGCGCC 1 cut(s) 1383
ErhI CCWWGG 2 cut(s) 279, 564
Esp3I CGTCTC 1 cut(s) 76
FaeI CATG 1 cut(s) 1540
FaiI YATR 4 cut(s) 199, 311, 1103, 1538
FaqI GGGAC 2 cut(s) 173, 521
FatI CATG 1 cut(s) 1536
FauI CCCGC 4 cut(s) 17, 546, 1230, 1427
FokI GGATG 7 cut(s) 38, 65, 80, 220, 325, 622, 1033
FriOI GRGCYC 1 cut(s) 1469
FseI GGCCGGCC 1 cut(s) 1300
FspBI CTAG 3 cut(s) 1215, 1611, 1650
GlaI GCGC 6 cut(s) 825, 1383, 1433, 1459, 1461, 1472
GsuI CTGGAG 2 cut(s) 1273, 1511
HaeII RGCGCY 1 cut(s) 1385
HaeIII GGCC 6 cut(s) 442, 821, 1183, 1273, 1296, 1300
HgaI GACGC 6 cut(s) 193, 236, 391, 658, 802, 1159
HhaI GCGC 6 cut(s) 826, 1384, 1434, 1460, 1462, 1473
Hin1I GRCGYC 6 cut(s) 204, 383, 650, 794, 1151, 1382
Hin1II CATG 1 cut(s) 1540
Hin6I GCGC 6 cut(s) 824, 1382, 1432, 1458, 1460, 1471
HinP1I GCGC 6 cut(s) 824, 1382, 1432, 1458, 1460, 1471
HincII GTYRAC 2 cut(s) 1501, 1570
HindII GTYRAC 2 cut(s) 1501, 1570
HinfI GANTC 9 cut(s) 161, 317, 323, 329, 389, 455, 592, 1159, 1363
HphI GGTGA 4 cut(s) 9, 30, 106, 825
Hpy166II GTNNAC 4 cut(s) 38, 1138, 1501, 1570
Hpy188III TCNNGA 5 cut(s) 148, 257, 473, 1147, 1484
Hpy8I GTNNAC 4 cut(s) 38, 1138, 1501, 1570
Hpy99I CGWCG 7 cut(s) 25, 227, 230, 509, 652, 796, 1508
HpyAV CCTTC 4 cut(s) 121, 654, 877, 1010
HpyCH4III ACNGT 5 cut(s) 21, 42, 700, 1325, 1401
HpyCH4IV ACGT 6 cut(s) 171, 689, 814, 1497, 1506, 1522
HpyCH4V TGCA 2 cut(s) 338, 1514
HpyF3I CTNAG 4 cut(s) 32, 437, 759, 1128
HpySE526I ACGT 6 cut(s) 171, 689, 814, 1497, 1506, 1522
Hsp92I GRCGYC 6 cut(s) 204, 383, 650, 794, 1151, 1382
Hsp92II CATG 1 cut(s) 1540
HspAI GCGC 6 cut(s) 824, 1382, 1432, 1458, 1460, 1471
KasI GGCGCC 1 cut(s) 1381
KpnI GGTACC 1 cut(s) 960
KroI GCCGGC 2 cut(s) 1183, 1296
KroNI GCCGGC 2 cut(s) 1185, 1298
KspI CCGCGG 1 cut(s) 1181
Kzo9I GATC 7 cut(s) 247, 433, 475, 712, 848, 1478, 1592
LmnI GCTCC 2 cut(s) 414, 428
Lsp1109I GCAGC 7 cut(s) 322, 429, 432, 618, 952, 967, 1343
LweI GCATC 5 cut(s) 239, 347, 1501, 1523, 1698
MaeI CTAG 3 cut(s) 1215, 1611, 1650
MaeII ACGT 6 cut(s) 171, 689, 814, 1497, 1506, 1522
MaeIII GTNAC 2 cut(s) 831, 949
MalI GATC 7 cut(s) 249, 435, 477, 714, 850, 1480, 1594
MbiI CCGCTC 1 cut(s) 15
MboI GATC 7 cut(s) 247, 433, 475, 712, 848, 1478, 1592
MflI RGATCY 3 cut(s) 433, 1478, 1592
MhlI GDGCHC 1 cut(s) 1469
MluCI AATT 5 cut(s) 101, 265, 582, 837, 1371
Mly113I GGCGCC 1 cut(s) 1382
MlyI GAGTC 4 cut(s) 155, 449, 1153, 1372
MmeI TCCRAC 4 cut(s) 682, 747, 1181, 1187
Mph1103I ATGCAT 1 cut(s) 1516
MroNI GCCGGC 2 cut(s) 1183, 1296
MseI TTAA 7 cut(s) 585, 735, 750, 1370, 1404, 1446, 1623
MspA1I CMGCKG 5 cut(s) 335, 631, 980, 1180, 1225
MspR9I CCNGG 2 cut(s) 431, 1270
Mva1269I GAATGC 1 cut(s) 252
MvnI CGCG 7 cut(s) 824, 1180, 1276, 1434, 1460, 1471, 1574
NaeI GCCGGC 2 cut(s) 1185, 1298
NarI GGCGCC 1 cut(s) 1382
NciI CCSGG 2 cut(s) 431, 1270
NdeII GATC 7 cut(s) 247, 433, 475, 712, 848, 1478, 1592
NgoMIV GCCGGC 2 cut(s) 1183, 1296
NlaIII CATG 1 cut(s) 1540
NlaIV GGNNCC 5 cut(s) 958, 1230, 1301, 1383, 1594
NmuCI GTSAC 2 cut(s) 831, 949
NsiI ATGCAT 1 cut(s) 1516
NspV TTCGAA 2 cut(s) 513, 778
PauI GCGCGC 1 cut(s) 1458
PcsI WCGNNNNNNNCGW 4 cut(s) 177, 510, 519, 1503
PctI GAATGC 1 cut(s) 252
PdiI GCCGGC 2 cut(s) 1185, 1298
PfeI GAWTC 5 cut(s) 317, 323, 329, 389, 592
PinAI ACCGGT 1 cut(s) 402
PleI GAGTC 4 cut(s) 155, 449, 1153, 1371
PluTI GGCGCC 1 cut(s) 1385
PpsI GAGTC 4 cut(s) 155, 449, 1153, 1371
Ppu21I YACGTR 1 cut(s) 1523
PshBI ATTAAT 1 cut(s) 750
Psp124BI GAGCTC 1 cut(s) 1469
PspN4I GGNNCC 5 cut(s) 958, 1230, 1301, 1383, 1594
PspPI GGNCC 1 cut(s) 1299
PsuI RGATCY 3 cut(s) 433, 1478, 1592
PteI GCGCGC 1 cut(s) 1458
PvuII CAGCTG 1 cut(s) 335
RigI GGCCGGCC 1 cut(s) 1300
RsaI GTAC 4 cut(s) 295, 572, 958, 1557
RsaNI GTAC 4 cut(s) 294, 571, 957, 1556
SacI GAGCTC 1 cut(s) 1469
SacII CCGCGG 1 cut(s) 1181
SaqAI TTAA 7 cut(s) 585, 735, 750, 1370, 1404, 1446, 1623
Sau3AI GATC 7 cut(s) 247, 433, 475, 712, 848, 1478, 1592
Sau96I GGNCC 1 cut(s) 1299
ScaI AGTACT 1 cut(s) 572
SchI GAGTC 4 cut(s) 155, 449, 1153, 1372
ScrFI CCNGG 2 cut(s) 431, 1270
SduI GDGCHC 1 cut(s) 1469
SfaNI GCATC 5 cut(s) 239, 347, 1501, 1523, 1698
SfoI GGCGCC 1 cut(s) 1383
Sfr303I CCGCGG 1 cut(s) 1181
SfuI TTCGAA 2 cut(s) 513, 778
SgrBI CCGCGG 1 cut(s) 1181
SmlI CTYRAG 1 cut(s) 1673
SmoI CTYRAG 1 cut(s) 1673
SpeI ACTAGT 1 cut(s) 1214
Sse9I AATT 5 cut(s) 101, 265, 582, 837, 1371
SspDI GGCGCC 1 cut(s) 1381
SspI AATATT 1 cut(s) 1025
SspMI CTAG 3 cut(s) 1215, 1611, 1650
SstI GAGCTC 1 cut(s) 1469
StyD4I CCNGG 2 cut(s) 429, 1268
StyI CCWWGG 2 cut(s) 279, 564
TaaI ACNGT 5 cut(s) 21, 42, 700, 1325, 1401
TaiI ACGT 6 cut(s) 174, 692, 817, 1500, 1509, 1525
TaqI TCGA 4 cut(s) 504, 513, 647, 778
TaqII GACCGA 1 cut(s) 1026
TasI AATT 5 cut(s) 101, 265, 582, 837, 1371
TatI WGTACW 2 cut(s) 570, 1555
TfiI GAWTC 5 cut(s) 317, 323, 329, 389, 592
Tru1I TTAA 7 cut(s) 585, 735, 750, 1370, 1404, 1446, 1623
Tru9I TTAA 7 cut(s) 585, 735, 750, 1370, 1404, 1446, 1623
TscAI CASTG 1 cut(s) 1297
TseFI GTSAC 2 cut(s) 831, 949
TseI GCWGC 7 cut(s) 335, 417, 420, 631, 940, 980, 1356
Tsp45I GTSAC 2 cut(s) 831, 949
TspDTI ATGAA 3 cut(s) 1553, 1633, 1697
TspGWI ACGGA 5 cut(s) 133, 721, 1132, 1356, 1588
TspRI CASTG 1 cut(s) 1297
VspI ATTAAT 1 cut(s) 750
XspI CTAG 3 cut(s) 1215, 1611, 1650
ZrmI AGTACT 1 cut(s) 572
Zsp2I ATGCAT 1 cut(s) 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.