Rh2AG088900

Hydroxyproline-rich glycoprotein family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0012501
Physical Location & Seq
Forward (+)
7441395 .. 7443784
2390 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG088900.1

Sequence Viewer

Length: 1653 bp
ATGCTTCGCCGTCACCAATCATCCTCTCCGCTCCTCTCTCTGCCGGTTCTCATCATCCTCCTCCCCACCATCATCTTACTCTTCCTCATCTACACCATCCCTCCACTTCTATCCCTCACCTCCCAACTCCTCCAGCCCACCGTCTCCGTCAAGAAAAGCTGGGACTCCCTCAACGTCTTCCTCGTCATCTTCGCTATTCTCTGCGGCGTTTTCGCTAGAAAAAACGACGACGGCTTGCCTGATCCCGACGACGATCACGTCCATATTCACAATGCTTCCGACCCTTTACTTGGTTCGGCCATTAACAGAACCACCTCATCTCCACAATCAGAACCAGCACTTCTTATTCCGCAGCAGCAATGGTTTGGATACTCGGAGAGAACGTCCAAGATGTATGACACTCCGGTTAGGACCCCGGAAAACGTCGGCGGCGGCCGGTTGAGGAGGAGAAGCTCGTACCCGGATCTGAGGCAAGCTGAGTCTCTGTGGCAAACTGTAGATGATGATCAAAGTAAGTCTCAGTTTCGTTTCTTTGATGATTTCGAAATCAGCAACTATAGAACTCACCGACACCACAGAGAGAGCAGCTCCGATGATGTTAAGGAGATTCCGGTGGATACTTTCGTACTTCAATCTTCTTCGCCGCCGGCTCCAAAGCCCCCGGGGCCATCGCCGCCACCACCTCCTCCTCCTCCGCCGCGTCATGAGAAACAAAGGACGTATGAGACGGTTGGTCGACGTAAAGTGGAAGATGTGAAAGTCGAGGAAGTTCGATCTACGCCACCACCGACACCTCCGCCTCTACCGCCTTCACGGCCAGTAGCTCCGCCGTCGCCAATGCGGGTTAGATCGGACCAGAAGCACGGGAGGCTTGAACGGAGGAAGAGTAACGTGAAGAAGGAGATAGCGATGGTATGGAATTCAGTTCTGTCCAATCAGAGAAAGAGAAAGAGGAGGCAGAAGGCTACAAGAAACAACATTTACGATACTGCCACTCCGGAACCTCCGGCGGAACAACCGCAACCGCCGCCTCCACCTCCGCCACCGCCTTCTTCTGTTTTTCATAATTTATTCAAGAAGGGAAGCAAAACTAAAAAGGTACATTCGGTCTCAACCACAGCACCACCACCACCTCCACCGCCGCCGCCGCCGACAGTTTCAGCACGAAAACATCAAACCCGGAGCTCTAATCCGCCACCGGCACCGACAACCCCGCCGCGTCCACCGCCCGCGGCACACTCCCGGCGCCGGCCACCATTGCCGACAAAACCAAGCACCTCCTACGAGGACAATGTGAACAGCGGCTGCCAGAGCCCGCCGATTCCGATTCCGCCGCCGCCGCCTCCGTTCAAAATGCCGGAGCTGAAGTTTTTCGTGAAGGGAGACTTTGTTAAGATACGGAGCGGTCAGAGCTCACGGTGTGGGTCCCCTGAACCGGCGGAGGAAGATGATGCAATGCCAGGTGGCAAGGGAGAGTCACAGTCATCGACAGTGAAGATAACCGACGGTGGAGATGGAGCTGGTGGCGGGTCGCCGTCGGTGTTCTGCCCCAGCCCTGATGTTAACACGAAAGCTGACAACTTCATTGCGAGGCTTAGAGATGAGTGGAGGCTCGAGAAGATGAACTCACTCAGGGAAAAGAAGATGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231
Pfam Domains
Protein Families
DUF761

Protein Analysis

550

Amino Acids

61.03

Weight (kDa)

9.86

Isoelectric Point (pI)

88.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF761 PF05553 519 - 545 9.6e-06 Cotton fibre expressed protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 257
AccB1I GGYRCC 2 cut(s) 1201, 1245
AccBSI CCGCTC 2 cut(s) 31, 1404
AccI GTMKAC 1 cut(s) 736
AccII CGCG 3 cut(s) 700, 1219, 1232
AccIII TCCGGA 1 cut(s) 997
AclWI GGATC 2 cut(s) 236, 471
AcoI YGGCCR 4 cut(s) 297, 433, 815, 1250
AcsI RAATTY 1 cut(s) 919
AcuI CTGAAG 1 cut(s) 1385
AcyI GRCGYC 1 cut(s) 1246
AdeI CACNNNGTG 1 cut(s) 1421
AfaI GTAC 3 cut(s) 458, 627, 1101
AfiI CCNNNNNNNGG 3 cut(s) 290, 1248, 1435
AgsI TTSAA 4 cut(s) 632, 875, 1075, 1351
AhdI GACNNNNNGTC 1 cut(s) 732
AjiI CACGTC 1 cut(s) 259
AjnI CCWGG 1 cut(s) 1459
Alw21I GWGCWC 2 cut(s) 1187, 1415
Alw26I GTCTC 6 cut(s) 148, 486, 522, 719, 1114, 1377
AlwI GGATC 2 cut(s) 236, 471
AlwNI CAGNNNCTG 1 cut(s) 1305
Ama87I CYCGRG 2 cut(s) 661, 1613
Aor13HI TCCGGA 1 cut(s) 997
AoxI GGCC 5 cut(s) 297, 433, 665, 815, 1250
ApeKI GCWGC 4 cut(s) 352, 355, 585, 1305
ApoI RAATTY 1 cut(s) 919
Asp700I GAANNNNTTC 1 cut(s) 1370
AspLEI GCGC 1 cut(s) 1248
AspS9I GGNCC 4 cut(s) 411, 665, 853, 1425
AsuC2I CCSGG 6 cut(s) 416, 461, 662, 663, 1180, 1243
AsuHPI GGTGA 3 cut(s) 5, 109, 557
AsuII TTCGAA 1 cut(s) 543
AvaI CYCGRG 2 cut(s) 661, 1613
AvaII GGWCC 3 cut(s) 411, 853, 1425
BaeI ACNNNNGTAYC 2 cut(s) 609, 642
BanI GGYRCC 2 cut(s) 1201, 1245
BanII GRGCYC 3 cut(s) 1187, 1316, 1415
BbsI GAAGAC 1 cut(s) 169
Bbv12I GWGCWC 2 cut(s) 1187, 1415
BbvI GCAGC 4 cut(s) 364, 367, 597, 1292
BccI CCATC 5 cut(s) 77, 104, 676, 904, 1508
BceAI ACGGC 4 cut(s) 247, 814, 830, 1519
BciT130I CCWGG 1 cut(s) 1461
BciVI GTATCC 2 cut(s) 362, 610
BclI TGATCA 1 cut(s) 505
BcnI CCSGG 6 cut(s) 416, 461, 662, 663, 1180, 1243
BcoDI GTCTC 6 cut(s) 148, 486, 522, 719, 1114, 1377
BfaI CTAG 1 cut(s) 216
BfmI CTRYAG 2 cut(s) 495, 556
BfoI RGCGCY 1 cut(s) 1249
BfuI GTATCC 2 cut(s) 362, 610
BglI GCCNNNNNGGC 2 cut(s) 664, 814
Bme1390I CCNGG 7 cut(s) 416, 461, 662, 663, 1180, 1243, 1461
Bme18I GGWCC 3 cut(s) 411, 853, 1425
BmeRI GACNNNNNGTC 1 cut(s) 732
BmeT110I CYCGRG 2 cut(s) 661, 1613
BmgBI CACGTC 1 cut(s) 259
BmgT120I GGNCC 4 cut(s) 411, 665, 853, 1425
BmiI GGNNCC 8 cut(s) 413, 651, 666, 1002, 1203, 1247, 1426, 1427
BmrFI CCNGG 7 cut(s) 416, 461, 662, 663, 1180, 1243, 1461
BmsI GCATC 1 cut(s) 1441
BpiI GAAGAC 1 cut(s) 169
BplI GAGNNNNNCTC 2 cut(s) 572, 604
BpmI CTGGAG 1 cut(s) 116
Bpu14I TTCGAA 1 cut(s) 543
BpuMI CCSGG 6 cut(s) 416, 461, 662, 663, 1180, 1243
BsaBI GATNNNNATC 1 cut(s) 504
BsaHI GRCGYC 1 cut(s) 1246
BsaI GGTCTC 1 cut(s) 1114
BsaJI CCNNGG 5 cut(s) 414, 660, 661, 662, 1230
BsaWI WCCGGW 3 cut(s) 403, 610, 997
Bsc4I CCNNNNNNNGG 3 cut(s) 290, 1248, 1435
Bse118I RCCGGY 6 cut(s) 43, 435, 646, 1198, 1248, 1435
Bse1I ACTGG 1 cut(s) 818
Bse3DI GCAATG 4 cut(s) 365, 1256, 1461, 1584
Bse8I GATNNNNATC 1 cut(s) 504
BseAI TCCGGA 1 cut(s) 997
BseBI CCWGG 1 cut(s) 1461
BseDI CCNNGG 5 cut(s) 414, 660, 661, 662, 1230
BseGI GGATG 3 cut(s) 20, 54, 96
BseJI GATNNNNATC 1 cut(s) 504
BseLI CCNNNNNNNGG 3 cut(s) 290, 1248, 1435
BseMI GCAATG 4 cut(s) 365, 1256, 1461, 1584
BseMII CTCAG 4 cut(s) 458, 468, 533, 1645
BseNI ACTGG 1 cut(s) 818
BseRI GAGGAG 9 cut(s) 23, 50, 119, 457, 460, 675, 678, 681, 967
BseX3I CGGCCG 1 cut(s) 433
BseXI GCAGC 4 cut(s) 364, 367, 597, 1292
BseYI CCCAGC 2 cut(s) 159, 1550
Bsh1236I CGCG 3 cut(s) 700, 1219, 1232
Bsh1285I CGRYCG 1 cut(s) 436
BshFI GGCC 5 cut(s) 299, 435, 667, 817, 1252
BshNI GGYRCC 2 cut(s) 1201, 1245
BsiEI CGRYCG 1 cut(s) 436
BsiHKAI GWGCWC 2 cut(s) 1187, 1415
BsiHKCI CYCGRG 2 cut(s) 661, 1613
BslFI GGGAC 2 cut(s) 176, 1411
BslI CCNNNNNNNGG 3 cut(s) 290, 1248, 1435
BsmAI GTCTC 6 cut(s) 148, 486, 522, 719, 1114, 1377
BsmBI CGTCTC 2 cut(s) 148, 719
BsmFI GGGAC 2 cut(s) 176, 1411
BsnI GGCC 5 cut(s) 299, 435, 667, 817, 1252
Bso31I GGTCTC 1 cut(s) 1114
BsoBI CYCGRG 2 cut(s) 661, 1613
Bsp119I TTCGAA 1 cut(s) 543
Bsp1286I GDGCHC 3 cut(s) 1187, 1316, 1415
Bsp13I TCCGGA 1 cut(s) 997
Bsp143I GATC 6 cut(s) 241, 253, 463, 505, 773, 848
BspANI GGCC 5 cut(s) 299, 435, 667, 817, 1252
BspCNI CTCAG 4 cut(s) 459, 469, 532, 1644
BspEI TCCGGA 1 cut(s) 997
BspFNI CGCG 3 cut(s) 700, 1219, 1232
BspHI TCATGA 1 cut(s) 703
BspLI GGNNCC 8 cut(s) 413, 651, 666, 1002, 1203, 1247, 1426, 1427
BspPI GGATC 2 cut(s) 236, 471
BspT104I TTCGAA 1 cut(s) 543
BspT107I GGYRCC 2 cut(s) 1201, 1245
BspTNI GGTCTC 1 cut(s) 1114
BsrBI CCGCTC 2 cut(s) 31, 1404
BsrDI GCAATG 4 cut(s) 365, 1256, 1461, 1584
BsrFI RCCGGY 6 cut(s) 43, 435, 646, 1198, 1248, 1435
BsrI ACTGG 1 cut(s) 818
BssAI RCCGGY 6 cut(s) 43, 435, 646, 1198, 1248, 1435
BssECI CCNNGG 5 cut(s) 414, 660, 661, 662, 1230
BssMI GATC 6 cut(s) 241, 253, 463, 505, 773, 848
BssNI GRCGYC 1 cut(s) 1246
Bst2UI CCWGG 1 cut(s) 1461
Bst4CI ACNGT 8 cut(s) 142, 496, 730, 1156, 1419, 1482, 1492, 1508
Bst6I CTCTTC 2 cut(s) 86, 878
BstACI GRCGYC 1 cut(s) 1246
BstBI TTCGAA 1 cut(s) 543
BstC8I GCNNGC 6 cut(s) 236, 474, 648, 1230, 1250, 1316
BstDEI CTNAG 5 cut(s) 467, 477, 519, 1595, 1631
BstDSI CCRYGG 1 cut(s) 1230
BstF5I GGATG 3 cut(s) 20, 54, 96
BstFNI CGCG 3 cut(s) 700, 1219, 1232
BstH2I RGCGCY 1 cut(s) 1249
BstHHI GCGC 1 cut(s) 1248
BstKTI GATC 6 cut(s) 244, 256, 466, 508, 776, 851
BstMAI GTCTC 6 cut(s) 148, 486, 522, 719, 1114, 1377
BstMBI GATC 6 cut(s) 241, 253, 463, 505, 773, 848
BstMCI CGRYCG 1 cut(s) 436
BstNI CCWGG 1 cut(s) 1461
BstSCI CCNGG 7 cut(s) 414, 459, 660, 661, 1178, 1241, 1459
BstSFI CTRYAG 2 cut(s) 495, 556
BstUI CGCG 3 cut(s) 700, 1219, 1232
BstV1I GCAGC 4 cut(s) 364, 367, 597, 1292
BstV2I GAAGAC 1 cut(s) 169
BstX2I RGATCY 1 cut(s) 463
BstYI RGATCY 1 cut(s) 463
BstZI CGGCCG 1 cut(s) 433
BsuI GTATCC 2 cut(s) 362, 610
BsuRI GGCC 5 cut(s) 299, 435, 667, 817, 1252
BtgI CCRYGG 1 cut(s) 1230
BtgZI GCGATG 2 cut(s) 654, 923
BtrI CACGTC 1 cut(s) 259
BtsCI GGATG 3 cut(s) 20, 54, 96
BtsIMutI CAGTG 1 cut(s) 1497
Cac8I GCNNGC 6 cut(s) 236, 474, 648, 1230, 1250, 1316
CaiI CAGNNNCTG 1 cut(s) 1305
CciI TCATGA 1 cut(s) 703
CfoI GCGC 1 cut(s) 1248
Cfr10I RCCGGY 6 cut(s) 43, 435, 646, 1198, 1248, 1435
Cfr13I GGNCC 4 cut(s) 411, 665, 853, 1425
Cfr42I CCGCGG 1 cut(s) 1233
Cfr9I CCCGGG 1 cut(s) 661
CseI GACGC 2 cut(s) 689, 1208
Csp6I GTAC 3 cut(s) 457, 626, 1100
CviAII CATG 1 cut(s) 704
CviQI GTAC 3 cut(s) 457, 626, 1100
DdeI CTNAG 5 cut(s) 467, 477, 519, 1595, 1631
DinI GGCGCC 1 cut(s) 1247
DpnI GATC 6 cut(s) 243, 255, 465, 507, 775, 850
DpnII GATC 6 cut(s) 241, 253, 463, 505, 773, 848
DraIII CACNNNGTG 1 cut(s) 1421
DrdI GACNNNNNNGTC 1 cut(s) 257
DriI GACNNNNNGTC 1 cut(s) 732
DseDI GACNNNNNNGTC 1 cut(s) 257
EaeI YGGCCR 4 cut(s) 297, 433, 815, 1250
EagI CGGCCG 1 cut(s) 433
Eam1104I CTCTTC 2 cut(s) 86, 878
Eam1105I GACNNNNNGTC 1 cut(s) 732
EarI CTCTTC 2 cut(s) 86, 878
EciI GGCGGA 8 cut(s) 684, 786, 816, 1025, 1029, 1182, 1320, 1454
Ecl136II GAGCTC 2 cut(s) 1185, 1413
EclXI CGGCCG 1 cut(s) 433
Eco24I GRGCYC 3 cut(s) 1187, 1316, 1415
Eco31I GGTCTC 1 cut(s) 1114
Eco47I GGWCC 3 cut(s) 411, 853, 1425
Eco52I CGGCCG 1 cut(s) 433
Eco53kI GAGCTC 2 cut(s) 1185, 1413
Eco57I CTGAAG 1 cut(s) 1385
Eco88I CYCGRG 2 cut(s) 661, 1613
EcoICRI GAGCTC 2 cut(s) 1185, 1413
EcoO109I RGGNCCY 2 cut(s) 411, 1425
EcoRI GAATTC 1 cut(s) 919
EcoRII CCWGG 1 cut(s) 1459
EcoT38I GRGCYC 3 cut(s) 1187, 1316, 1415
EgeI GGCGCC 1 cut(s) 1247
EheI GGCGCC 1 cut(s) 1247
Esp3I CGTCTC 2 cut(s) 148, 719
FaeI CATG 1 cut(s) 707
FaiI YATR 7 cut(s) 264, 396, 558, 705, 723, 916, 1065
FalI AAGNNNNNCTT 2 cut(s) 1370, 1402
FaqI GGGAC 2 cut(s) 176, 1411
FatI CATG 1 cut(s) 703
FauI CCCGC 5 cut(s) 834, 1221, 1237, 1323, 1520
FbaI TGATCA 1 cut(s) 505
FblI GTMKAC 1 cut(s) 736
FokI GGATG 3 cut(s) 7, 41, 83
FriOI GRGCYC 3 cut(s) 1187, 1316, 1415
FspBI CTAG 1 cut(s) 216
GlaI GCGC 1 cut(s) 1247
GsaI CCCAGC 2 cut(s) 163, 1554
GsuI CTGGAG 1 cut(s) 116
HaeII RGCGCY 1 cut(s) 1249
HaeIII GGCC 5 cut(s) 299, 435, 667, 817, 1252
HgaI GACGC 2 cut(s) 689, 1208
HhaI GCGC 1 cut(s) 1248
Hin1I GRCGYC 1 cut(s) 1246
Hin1II CATG 1 cut(s) 707
Hin6I GCGC 1 cut(s) 1246
HinP1I GCGC 1 cut(s) 1246
HincII GTYRAC 2 cut(s) 737, 1564
HindII GTYRAC 2 cut(s) 737, 1564
HinfI GANTC 6 cut(s) 164, 479, 607, 1321, 1327, 1475
HpaI GTTAAC 1 cut(s) 1564
HphI GGTGA 3 cut(s) 5, 109, 557
Hpy166II GTNNAC 4 cut(s) 737, 1223, 1297, 1564
Hpy188I TCNGA 9 cut(s) 280, 331, 376, 468, 592, 853, 939, 1326, 1410
Hpy188III TCNNGA 7 cut(s) 151, 245, 704, 998, 1075, 1375, 1615
Hpy8I GTNNAC 4 cut(s) 737, 1223, 1297, 1564
Hpy99I CGWCG 9 cut(s) 230, 233, 251, 254, 428, 741, 835, 1508, 1540
HpyAV CCTTC 6 cut(s) 819, 892, 955, 1059, 1072, 1372
HpyCH4III ACNGT 8 cut(s) 142, 496, 730, 1156, 1419, 1482, 1492, 1508
HpyCH4IV ACGT 7 cut(s) 174, 258, 383, 423, 719, 739, 891
HpyCH4V TGCA 1 cut(s) 1454
HpyF3I CTNAG 5 cut(s) 467, 477, 519, 1595, 1631
HpySE526I ACGT 7 cut(s) 174, 258, 383, 423, 719, 739, 891
Hsp92I GRCGYC 1 cut(s) 1246
Hsp92II CATG 1 cut(s) 707
HspAI GCGC 1 cut(s) 1246
KasI GGCGCC 1 cut(s) 1245
KflI GGGWCCC 1 cut(s) 1425
Kpn2I TCCGGA 1 cut(s) 997
KroI GCCGGC 2 cut(s) 646, 1248
KroNI GCCGGC 2 cut(s) 648, 1250
Ksp22I TGATCA 1 cut(s) 505
KspAI GTTAAC 1 cut(s) 1564
KspI CCGCGG 1 cut(s) 1233
Kzo9I GATC 6 cut(s) 241, 253, 463, 505, 773, 848
LmnI GCTCC 8 cut(s) 36, 593, 655, 829, 1182, 1360, 1401, 1517
Lsp1109I GCAGC 4 cut(s) 364, 367, 597, 1292
LweI GCATC 1 cut(s) 1441
MaeI CTAG 1 cut(s) 216
MaeII ACGT 7 cut(s) 174, 258, 383, 423, 719, 739, 891
MaeIII GTNAC 3 cut(s) 11, 887, 1476
MalI GATC 6 cut(s) 243, 255, 465, 507, 775, 850
MbiI CCGCTC 2 cut(s) 31, 1404
MboI GATC 6 cut(s) 241, 253, 463, 505, 773, 848
MflI RGATCY 1 cut(s) 463
MhlI GDGCHC 3 cut(s) 1187, 1316, 1415
MluCI AATT 2 cut(s) 919, 1066
Mly113I GGCGCC 1 cut(s) 1246
MlyI GAGTC 3 cut(s) 158, 488, 1484
MmeI TCCRAC 1 cut(s) 303
MroI TCCGGA 1 cut(s) 997
MroNI GCCGGC 2 cut(s) 646, 1248
MroXI GAANNNNTTC 1 cut(s) 1370
MseI TTAA 4 cut(s) 303, 600, 1392, 1563
MspA1I CMGCKG 2 cut(s) 1232, 1302
MspR9I CCNGG 7 cut(s) 416, 461, 662, 663, 1180, 1243, 1461
MvaI CCWGG 1 cut(s) 1461
MvnI CGCG 3 cut(s) 700, 1219, 1232
NaeI GCCGGC 2 cut(s) 648, 1250
NarI GGCGCC 1 cut(s) 1246
NciI CCSGG 6 cut(s) 416, 461, 662, 663, 1180, 1243
NdeII GATC 6 cut(s) 241, 253, 463, 505, 773, 848
NgoMIV GCCGGC 2 cut(s) 646, 1248
NlaIII CATG 1 cut(s) 707
NlaIV GGNNCC 8 cut(s) 413, 651, 666, 1002, 1203, 1247, 1426, 1427
NmuCI GTSAC 2 cut(s) 11, 1476
NspV TTCGAA 1 cut(s) 543
PaeR7I CTCGAG 1 cut(s) 1613
PagI TCATGA 1 cut(s) 703
PcsI WCGNNNNNNNCGW 4 cut(s) 180, 255, 380, 785
PdiI GCCGGC 2 cut(s) 648, 1250
PdmI GAANNNNTTC 1 cut(s) 1370
PfeI GAWTC 3 cut(s) 607, 1321, 1327
PleI GAGTC 3 cut(s) 158, 487, 1483
PluTI GGCGCC 1 cut(s) 1249
PpsI GAGTC 3 cut(s) 158, 487, 1483
PpuMI RGGWCCY 2 cut(s) 411, 1425
Psp124BI GAGCTC 2 cut(s) 1187, 1415
Psp5II RGGWCCY 2 cut(s) 411, 1425
Psp6I CCWGG 1 cut(s) 1459
PspFI CCCAGC 2 cut(s) 159, 1550
PspGI CCWGG 1 cut(s) 1459
PspN4I GGNNCC 8 cut(s) 413, 651, 666, 1002, 1203, 1247, 1426, 1427
PspPI GGNCC 4 cut(s) 411, 665, 853, 1425
PspPPI RGGWCCY 2 cut(s) 411, 1425
PstNI CAGNNNCTG 1 cut(s) 1305
PsuI RGATCY 1 cut(s) 463
RsaI GTAC 3 cut(s) 458, 627, 1101
RsaNI GTAC 3 cut(s) 457, 626, 1100
SacI GAGCTC 2 cut(s) 1187, 1415
SacII CCGCGG 1 cut(s) 1233
SalI GTCGAC 1 cut(s) 735
SaqAI TTAA 4 cut(s) 303, 600, 1392, 1563
Sau3AI GATC 6 cut(s) 241, 253, 463, 505, 773, 848
Sau96I GGNCC 4 cut(s) 411, 665, 853, 1425
SchI GAGTC 3 cut(s) 158, 488, 1484
ScrFI CCNGG 7 cut(s) 416, 461, 662, 663, 1180, 1243, 1461
SduI GDGCHC 3 cut(s) 1187, 1316, 1415
SfaNI GCATC 1 cut(s) 1441
SfcI CTRYAG 2 cut(s) 495, 556
SfoI GGCGCC 1 cut(s) 1247
Sfr274I CTCGAG 1 cut(s) 1613
Sfr303I CCGCGG 1 cut(s) 1233
SfuI TTCGAA 1 cut(s) 543
SgrBI CCGCGG 1 cut(s) 1233
SinI GGWCC 3 cut(s) 411, 853, 1425
SlaI CTCGAG 1 cut(s) 1613
SmaI CCCGGG 1 cut(s) 663
SmlI CTYRAG 1 cut(s) 1613
SmoI CTYRAG 1 cut(s) 1613
Sse9I AATT 2 cut(s) 919, 1066
SspDI GGCGCC 1 cut(s) 1245
SspMI CTAG 1 cut(s) 216
SstI GAGCTC 2 cut(s) 1187, 1415
StyD4I CCNGG 7 cut(s) 414, 459, 660, 661, 1178, 1241, 1459
TaaI ACNGT 8 cut(s) 142, 496, 730, 1156, 1419, 1482, 1492, 1508
TaiI ACGT 7 cut(s) 177, 261, 386, 426, 722, 742, 894
TaqI TCGA 6 cut(s) 543, 736, 762, 772, 1487, 1614
TaqII GACCGA 1 cut(s) 1096
TasI AATT 2 cut(s) 919, 1066
TfiI GAWTC 3 cut(s) 607, 1321, 1327
Tru1I TTAA 4 cut(s) 303, 600, 1392, 1563
Tru9I TTAA 4 cut(s) 303, 600, 1392, 1563
TscAI CASTG 1 cut(s) 1497
TseFI GTSAC 2 cut(s) 11, 1476
TseI GCWGC 4 cut(s) 352, 355, 585, 1305
Tsp45I GTSAC 2 cut(s) 11, 1476
TspDTI ATGAA 3 cut(s) 1052, 1573, 1637
TspGWI ACGGA 4 cut(s) 136, 892, 1335, 1414
TspMI CCCGGG 1 cut(s) 661
TspRI CASTG 1 cut(s) 1497
VpaK11BI GGWCC 3 cut(s) 411, 853, 1425
XapI RAATTY 1 cut(s) 919
XhoI CTCGAG 1 cut(s) 1613
XmaI CCCGGG 1 cut(s) 661
XmiI GTMKAC 1 cut(s) 736
XmnI GAANNNNTTC 1 cut(s) 1370
XspI CTAG 1 cut(s) 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.