Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0012501

Physical Location & Seq

Genomic Coordinates Forward (+)

13394457 .. 13396735

Gene Structure 2279 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g18880.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGAATGCATGTAACACACCGATTTTTATTCAAAAGAACGTTCTATCATCTATAAAATTTAATAACAATGGAAGATATTTAGTGCAAGTACCGGGAGAACCCATCAAAACCGCCACCCCCCACCTACTTGTCCCAACTCACCATCATCACCACCACCACCACCCCCACCCCCCCTCCTCCATGCCTCGCCGCCATGGCTCACCGTCTCCTCTTTTAAGTCCACCGTTGCTCATCATCCTCTTCCCCATCATCATCTCACTCATCCTCTTCTATACCATCCCTCCATTCCTATCTCTCACGTCTCAACTCCTCCGCCCCACCATTTCCGCCAAGAAAAGTTGGGACTCCCTCAATGTGTTTCTCGTCATTTTCGCAATCCTATGCGGCGTTTTCGCCAATCGAAACGAAGACGCATCACCTACCCAGGAAGATCGCATTCCCGACCATAATATTCCACACCCTTTGGACAACGTAACTACAAACAGCGCGAACATATCGGAATCGGAAGCAGCTGGGTCTTTACTTCCGCAGCAATGGTTTGGATATTCAGAGAGGAGGACCCCGGAAATCGGTGATGGCCGGTTGAGGAGGAGCAGCAACTCCTACCCGGATCTGAGGCAACTCGGGCAAGACTCAGTGTGGGAAACTCCGGATCACAACAAGCCGCAGTTCCGCTTCTTCGACGACTTCGAAATCGGCAATTACAATCGTGCGCCGTCAACTTCACACCAACGCCGATCCGAGGGGTACTCAGATGTAATTAAGGAGATTCCGGTGGATACTTTCGTACTTCACTCTTCTCATCCCCCGCCGCAAAAGCCGCCAACACCGACACCTCCACCGCCGCCTCCACCACGTCAACAAAAAACGAGAAGGACGTATCAGACCTTTCGACGTAAACATCCAAAAACGGAGAAAGTAGTGAATAATCATATTACTGAAGAGGGTGAAGAAATTGAGAACGTTCGAACGTCACCACCGACGCCTCCACCTCCTCCGCCGCCAAGGCCTGCTGCCCCGCCATCGCCAATTCGGATTCGGTCGGAGCCGAAGCGCCGGAAGAGTAATGTGAAGAAGGAGATAGCGATGGTTTGGGCTTCGGTTCTGTCTAATCAGAGAAAGGGGAAGAAGAAGCACAAGGTCACCGGTACCAGAAACATCTACGAAACTGTTGCTTCTCTGCCTGAAGACCAACAACAAGGAGGAGAAGGAGAATACTTTTTCACAAGACCGCGGCCGTCGCAACCTCCTCCACCGCCACCCCCACCGCCGCCACATTCTGTGTTTCATAATCTGTTCAAAAAGGGAATGAGCAAAACTAAGAAAGTTCACTCCATCTCGACACCTCCAACTCCACCACCACCACCACAGCCGGCATTGCGGAAACAAAAGAGTTGGAACACTAGTTTTCCGCTGGCGCCACCAACTCCGCCTCAACAACCACCGCCGGCTACTTCCCGACGGCGATCTTCCACCTCCAGTGGCCGTCCGCCGTTGCCGACTAAGTCGAGCAGTTATCTGTACGAGGAAAATGTAAACAGCGGCAGCCAGAGTCCGTTAATTCCAGTGGCGCCGCCACCTCCTCCGCCGTTCAAAATGCCGGAGCTGAAGTTTTTTGTGCGCGGGGATTTTGTTAAGATACGGAGTGCGGAGAGCTCACGCTGTGGATCTCCTGAATTGGAGGACGTTGATGACGTTGATGCGTCGCCACGTAAGGAAGAAGACTTGAAGTCAAAGTCAGAAGTACAGAGTAAAGTCAACGTGATGGACACTGGAGATGGTGGTGGTGGTGGCGGCAGCGGCGGCAGATCCTCCGTGTTCTGCCCTAGCCCAGATGTTAATACGAAAGCTGATAACTTCATTGCTAGGCTGAGAGATGAGTGGAAGCTTGAGAAGATGAACTCAATGAGGCAGAAAAAGAAGATGCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231

Pfam Domains

Protein Families

DUF761

Protein Analysis

644

Amino Acids

71.86

Weight (kDa)

9.86

Isoelectric Point (pI)

79.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57070
fragaria_vesca	FvH4_1g08080
malus_domestica	MD02G1085400.v1.1 MD15G1212500.v1.1
prunus_persica	Prupe.7G204200_v2.0.a1
pyrus_communis	pycom02g06820 pycom15g18880
rosa_chinensis	RchiOBHm_Chr2g0094141
rosa_laevigata	RLG00000016459
rosa_multiflora	Rmu_co8158242.1_g000001 Rmu_co8328587.1_g000001 Rmu_sc0017959.1_g000003 Rmu_ssc0000149.1_g000005
rosa_roxburghii	Rroxscaffold_2G00147450
rosa_rugosa	Rorug02G0041200
rosa_samantha	Rh2AG088900 Rh2BG089000 Rh2CG091400 Rh2DG088000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1148
AccB1I	GGYRCC	3 cut(s)	1148, 1417, 1570
AccII	CGCG	3 cut(s)	488, 1234, 1623
AccIII	TCCGGA	1 cut(s)	649
AclI	AACGTT	2 cut(s)	39, 963
AclWI	GGATC	5 cut(s)	618, 660, 732, 1675, 1803
AcoI	YGGCCR	3 cut(s)	577, 1235, 1483
AcsI	RAATTY	1 cut(s)	56
AcuI	CTGAAG	3 cut(s)	960, 1206, 1628
AcyI	GRCGYC	3 cut(s)	983, 1418, 1571
AdeI	CACNNNGTG	1 cut(s)	1664
AfaI	GTAC	6 cut(s)	90, 749, 789, 1150, 1523, 1746
AfiI	CCNNNNNNNGG	2 cut(s)	569, 742
AgeI	ACCGGT	1 cut(s)	1145
AgsI	TTSAA	4 cut(s)	32, 1300, 1594, 1729
AhdI	GACNNNNNGTC	1 cut(s)	1729
AhlI	ACTAGT	1 cut(s)	1403
AjiI	CACGTC	2 cut(s)	300, 857
AjnI	CCWGG	1 cut(s)	423
AluBI	AGCT	5 cut(s)	512, 1606, 1656, 1850, 1888
AluI	AGCT	5 cut(s)	512, 1606, 1656, 1850, 1888
Alw21I	GWGCWC	1 cut(s)	1658
Alw26I	GTCTC	2 cut(s)	210, 306
AlwI	GGATC	5 cut(s)	618, 660, 732, 1675, 1803
Ama87I	CYCGRG	1 cut(s)	623
Aor13HI	TCCGGA	1 cut(s)	649
AoxI	GGCC	4 cut(s)	577, 1007, 1235, 1483
ApeKI	GCWGC	6 cut(s)	509, 529, 594, 1013, 1545, 1797
ApoI	RAATTY	1 cut(s)	56
AsiGI	ACCGGT	1 cut(s)	1145
Asp718I	GGTACC	1 cut(s)	1148
AspLEI	GCGC	6 cut(s)	488, 715, 1056, 1420, 1573, 1623
AspS9I	GGNCC	1 cut(s)	558
AsuC2I	CCSGG	3 cut(s)	93, 563, 608
AsuHPI	GGTGA	8 cut(s)	131, 140, 192, 408, 584, 959, 966, 1135
AsuII	TTCGAA	2 cut(s)	690, 967
AvaI	CYCGRG	1 cut(s)	623
AvaII	GGWCC	1 cut(s)	558
BaeI	ACNNNNGTAYC	2 cut(s)	771, 804
BanI	GGYRCC	3 cut(s)	1148, 1417, 1570
BanII	GRGCYC	1 cut(s)	1658
BbsI	GAAGAC	3 cut(s)	414, 1194, 1728
Bbv12I	GWGCWC	1 cut(s)	1658
BbvI	GCAGC	6 cut(s)	521, 541, 606, 1000, 1557, 1809
BceAI	ACGGC	6 cut(s)	700, 1222, 1470, 1477, 1478, 1573
BcgI	CGANNNNNNTGC	2 cut(s)	1154, 1188
BciT130I	CCWGG	1 cut(s)	425
BciVI	GTATCC	1 cut(s)	772
BcnI	CCSGG	3 cut(s)	93, 563, 608
BcoDI	GTCTC	2 cut(s)	210, 306
BcuI	ACTAGT	1 cut(s)	1403
BfaI	CTAG	3 cut(s)	1404, 1827, 1866
BfoI	RGCGCY	3 cut(s)	1057, 1421, 1574
BfuI	GTATCC	1 cut(s)	772
BglI	GCCNNNNNGGC	2 cut(s)	195, 1006
Bme1390I	CCNGG	4 cut(s)	93, 425, 563, 608
Bme18I	GGWCC	1 cut(s)	558
BmeRI	GACNNNNNGTC	1 cut(s)	1729
BmeT110I	CYCGRG	1 cut(s)	623
BmgBI	CACGTC	2 cut(s)	300, 857
BmgT120I	GGNCC	1 cut(s)	558
BmiI	GGNNCC	5 cut(s)	560, 1047, 1150, 1419, 1572
BmrFI	CCNGG	4 cut(s)	93, 425, 563, 608
BmsI	GCATC	3 cut(s)	422, 1690, 1914
BpiI	GAAGAC	3 cut(s)	414, 1194, 1728
BplI	GAGNNNNNCTC	2 cut(s)	734, 766
BpmI	CTGGAG	2 cut(s)	1462, 1794
Bpu14I	TTCGAA	2 cut(s)	690, 967
BpuEI	CTTGAG	1 cut(s)	1910
BpuMI	CCSGG	3 cut(s)	93, 563, 608
BsaAI	YACGTR	1 cut(s)	1712
BsaHI	GRCGYC	3 cut(s)	983, 1418, 1571
BsaJI	CCNNGG	6 cut(s)	193, 423, 561, 741, 1004, 1232
BsaWI	WCCGGW	3 cut(s)	649, 772, 1145
BsaXI	ACNNNNNCTCC	6 cut(s)	158, 188, 265, 295, 1595, 1625
Bsc4I	CCNNNNNNNGG	2 cut(s)	569, 742
Bse118I	RCCGGY	4 cut(s)	579, 1145, 1372, 1447
Bse1I	ACTGG	3 cut(s)	1479, 1565, 1777
Bse3DI	GCAATG	3 cut(s)	539, 1376, 1860
BseAI	TCCGGA	1 cut(s)	649
BseBI	CCWGG	1 cut(s)	425
BseDI	CCNNGG	6 cut(s)	193, 423, 561, 741, 1004, 1232
BseGI	GGATG	5 cut(s)	234, 261, 276, 802, 901
BseLI	CCNNNNNNNGG	2 cut(s)	569, 742
BseMI	GCAATG	3 cut(s)	539, 1376, 1860
BseMII	CTCAG	4 cut(s)	605, 648, 765, 1862
BseNI	ACTGG	3 cut(s)	1479, 1565, 1777
BseX3I	CGGCCG	1 cut(s)	1235
BseXI	GCAGC	6 cut(s)	521, 541, 606, 1000, 1557, 1809
BseYI	CCCAGC	1 cut(s)	512
Bsh1236I	CGCG	3 cut(s)	488, 1234, 1623
Bsh1285I	CGRYCG	2 cut(s)	1043, 1238
BshFI	GGCC	4 cut(s)	579, 1009, 1237, 1485
BshNI	GGYRCC	3 cut(s)	1148, 1417, 1570
BshTI	ACCGGT	1 cut(s)	1145
BsiEI	CGRYCG	2 cut(s)	1043, 1238
BsiHKAI	GWGCWC	1 cut(s)	1658
BsiHKCI	CYCGRG	1 cut(s)	623
BslFI	GGGAC	2 cut(s)	116, 356
BslI	CCNNNNNNNGG	2 cut(s)	569, 742
BsmAI	GTCTC	2 cut(s)	210, 306
BsmBI	CGTCTC	2 cut(s)	210, 306
BsmFI	GGGAC	2 cut(s)	116, 356
BsmI	GAATGC	2 cut(s)	10, 435
BsnI	GGCC	4 cut(s)	579, 1009, 1237, 1485
BsoBI	CYCGRG	1 cut(s)	623
Bsp119I	TTCGAA	2 cut(s)	690, 967
Bsp1286I	GDGCHC	1 cut(s)	1658
Bsp13I	TCCGGA	1 cut(s)	649
Bsp143I	GATC	7 cut(s)	430, 610, 652, 737, 1466, 1667, 1808
Bsp19I	CCATGG	1 cut(s)	193
BspANI	GGCC	4 cut(s)	579, 1009, 1237, 1485
BspCNI	CTCAG	4 cut(s)	606, 647, 764, 1863
BspEI	TCCGGA	1 cut(s)	649
BspFNI	CGCG	3 cut(s)	488, 1234, 1623
BspLI	GGNNCC	5 cut(s)	560, 1047, 1150, 1419, 1572
BspPI	GGATC	5 cut(s)	618, 660, 732, 1675, 1803
BspT104I	TTCGAA	2 cut(s)	690, 967
BspT107I	GGYRCC	3 cut(s)	1148, 1417, 1570
BsrDI	GCAATG	3 cut(s)	539, 1376, 1860
BsrFI	RCCGGY	4 cut(s)	579, 1145, 1372, 1447
BsrI	ACTGG	3 cut(s)	1479, 1565, 1777
BssAI	RCCGGY	4 cut(s)	579, 1145, 1372, 1447
BssECI	CCNNGG	6 cut(s)	193, 423, 561, 741, 1004, 1232
BssMI	GATC	7 cut(s)	430, 610, 652, 737, 1466, 1667, 1808
BssNI	GRCGYC	3 cut(s)	983, 1418, 1571
BssT1I	CCWWGG	2 cut(s)	193, 1004
Bst2UI	CCWGG	1 cut(s)	425
Bst4CI	ACNGT	3 cut(s)	204, 225, 1171
Bst6I	CTCTTC	5 cut(s)	245, 272, 802, 936, 1055
BstACI	GRCGYC	3 cut(s)	983, 1418, 1571
BstBAI	YACGTR	1 cut(s)	1712
BstBI	TTCGAA	2 cut(s)	690, 967
BstC8I	GCNNGC	4 cut(s)	1011, 1374, 1416, 1449
BstDEI	CTNAG	6 cut(s)	614, 634, 751, 1320, 1503, 1871
BstDSI	CCRYGG	2 cut(s)	193, 1232
BstEII	GGTNACC	1 cut(s)	1141
BstF5I	GGATG	5 cut(s)	234, 261, 276, 802, 901
BstFNI	CGCG	3 cut(s)	488, 1234, 1623
BstH2I	RGCGCY	3 cut(s)	1057, 1421, 1574
BstHHI	GCGC	6 cut(s)	488, 715, 1056, 1420, 1573, 1623
BstKTI	GATC	7 cut(s)	433, 613, 655, 740, 1469, 1670, 1811
BstMAI	GTCTC	2 cut(s)	210, 306
BstMBI	GATC	7 cut(s)	430, 610, 652, 737, 1466, 1667, 1808
BstMCI	CGRYCG	2 cut(s)	1043, 1238
BstMWI	GCNNNNNNNGC	9 cut(s)	195, 625, 817, 820, 1006, 1240, 1378, 1800, 1803
BstNI	CCWGG	1 cut(s)	425
BstNSI	RCATGY	1 cut(s)	12
BstPI	GGTNACC	1 cut(s)	1141
BstSCI	CCNGG	4 cut(s)	91, 423, 561, 606
BstUI	CGCG	3 cut(s)	488, 1234, 1623
BstV1I	GCAGC	6 cut(s)	521, 541, 606, 1000, 1557, 1809
BstV2I	GAAGAC	3 cut(s)	414, 1194, 1728
BstX2I	RGATCY	3 cut(s)	610, 1667, 1808
BstYI	RGATCY	3 cut(s)	610, 1667, 1808
BstZI	CGGCCG	1 cut(s)	1235
BsuI	GTATCC	1 cut(s)	772
BsuRI	GGCC	4 cut(s)	579, 1009, 1237, 1485
BtgI	CCRYGG	2 cut(s)	193, 1232
BtgZI	GCGATG	2 cut(s)	1008, 1100
BtrI	CACGTC	2 cut(s)	300, 857
BtsCI	GGATG	5 cut(s)	234, 261, 276, 802, 901
BtsIMutI	CAGTG	4 cut(s)	642, 1486, 1572, 1770
Cac8I	GCNNGC	4 cut(s)	1011, 1374, 1416, 1449
CfoI	GCGC	6 cut(s)	488, 715, 1056, 1420, 1573, 1623
Cfr10I	RCCGGY	4 cut(s)	579, 1145, 1372, 1447
Cfr13I	GGNCC	1 cut(s)	558
Cfr42I	CCGCGG	1 cut(s)	1235
CseI	GACGC	3 cut(s)	419, 991, 1692
Csp6I	GTAC	6 cut(s)	89, 748, 788, 1149, 1522, 1745
CspAI	ACCGGT	1 cut(s)	1145
CspCI	CAANNNNNGTGG	2 cut(s)	444, 479
CviAII	CATG	3 cut(s)	9, 181, 194
CviQI	GTAC	6 cut(s)	89, 748, 788, 1149, 1522, 1745
DdeI	CTNAG	6 cut(s)	614, 634, 751, 1320, 1503, 1871
DinI	GGCGCC	2 cut(s)	1419, 1572
DpnI	GATC	7 cut(s)	432, 612, 654, 739, 1468, 1669, 1810
DpnII	GATC	7 cut(s)	430, 610, 652, 737, 1466, 1667, 1808
DraIII	CACNNNGTG	1 cut(s)	1664
DriI	GACNNNNNGTC	1 cut(s)	1729
EaeI	YGGCCR	3 cut(s)	577, 1235, 1483
EagI	CGGCCG	1 cut(s)	1235
Eam1104I	CTCTTC	5 cut(s)	245, 272, 802, 936, 1055
Eam1105I	GACNNNNNGTC	1 cut(s)	1729
EarI	CTCTTC	5 cut(s)	245, 272, 802, 936, 1055
EciI	GGCGGA	6 cut(s)	302, 316, 987, 1419, 1479, 1575
Ecl136II	GAGCTC	1 cut(s)	1656
EclXI	CGGCCG	1 cut(s)	1235
Eco130I	CCWWGG	2 cut(s)	193, 1004
Eco147I	AGGCCT	1 cut(s)	1009
Eco24I	GRGCYC	1 cut(s)	1658
Eco47I	GGWCC	1 cut(s)	558
Eco52I	CGGCCG	1 cut(s)	1235
Eco53kI	GAGCTC	1 cut(s)	1656
Eco57I	CTGAAG	3 cut(s)	960, 1206, 1628
Eco88I	CYCGRG	1 cut(s)	623
Eco91I	GGTNACC	1 cut(s)	1141
EcoICRI	GAGCTC	1 cut(s)	1656
EcoO109I	RGGNCCY	1 cut(s)	558
EcoO65I	GGTNACC	1 cut(s)	1141
EcoRII	CCWGG	1 cut(s)	423
EcoT14I	CCWWGG	2 cut(s)	193, 1004
EcoT22I	ATGCAT	1 cut(s)	10
EcoT38I	GRGCYC	1 cut(s)	1658
EgeI	GGCGCC	2 cut(s)	1419, 1572
EheI	GGCGCC	2 cut(s)	1419, 1572
ErhI	CCWWGG	2 cut(s)	193, 1004
Esp3I	CGTCTC	2 cut(s)	210, 306
FaeI	CATG	3 cut(s)	12, 184, 197
FaqI	GGGAC	2 cut(s)	116, 356
FatI	CATG	3 cut(s)	8, 180, 193
FauI	CCCGC	3 cut(s)	816, 1026, 1616
FokI	GGATG	5 cut(s)	221, 248, 263, 789, 888
FriOI	GRGCYC	1 cut(s)	1658
FspBI	CTAG	3 cut(s)	1404, 1827, 1866
GlaI	GCGC	6 cut(s)	487, 714, 1055, 1419, 1572, 1622
GsaI	CCCAGC	1 cut(s)	516
GsuI	CTGGAG	2 cut(s)	1462, 1794
HaeII	RGCGCY	3 cut(s)	1057, 1421, 1574
HaeIII	GGCC	4 cut(s)	579, 1009, 1237, 1485
HgaI	GACGC	3 cut(s)	419, 991, 1692
HhaI	GCGC	6 cut(s)	488, 715, 1056, 1420, 1573, 1623
Hin1I	GRCGYC	3 cut(s)	983, 1418, 1571
Hin1II	CATG	3 cut(s)	12, 184, 197
Hin6I	GCGC	6 cut(s)	486, 713, 1054, 1418, 1571, 1621
HinP1I	GCGC	6 cut(s)	486, 713, 1054, 1418, 1571, 1621
HincII	GTYRAC	3 cut(s)	720, 860, 1759
HindII	GTYRAC	3 cut(s)	720, 860, 1759
HindIII	AAGCTT	1 cut(s)	1886
HinfI	GANTC	6 cut(s)	344, 500, 632, 769, 1036, 1552
HphI	GGTGA	8 cut(s)	131, 140, 192, 408, 584, 959, 966, 1135
Hpy166II	GTNNAC	7 cut(s)	221, 720, 860, 899, 1330, 1537, 1759
Hpy188III	TCNNGA	5 cut(s)	440, 650, 1339, 1458, 1673
Hpy8I	GTNNAC	7 cut(s)	221, 720, 860, 899, 1330, 1537, 1759
Hpy99I	CGWCG	6 cut(s)	686, 897, 985, 1243, 1464, 1708
HpyAV	CCTTC	3 cut(s)	867, 1069, 1202
HpyCH4III	ACNGT	3 cut(s)	204, 225, 1171
HpyCH4V	TGCA	2 cut(s)	8, 85
HpyF10VI	GCNNNNNNNGC	9 cut(s)	195, 625, 817, 820, 1006, 1240, 1378, 1800, 1803
HpyF3I	CTNAG	6 cut(s)	614, 634, 751, 1320, 1503, 1871
Hsp92I	GRCGYC	3 cut(s)	983, 1418, 1571
Hsp92II	CATG	3 cut(s)	12, 184, 197
HspAI	GCGC	6 cut(s)	486, 713, 1054, 1418, 1571, 1621
KasI	GGCGCC	2 cut(s)	1417, 1570
Kpn2I	TCCGGA	1 cut(s)	649
KpnI	GGTACC	1 cut(s)	1152
KroI	GCCGGC	2 cut(s)	1372, 1447
KroNI	GCCGGC	2 cut(s)	1374, 1449
KspI	CCGCGG	1 cut(s)	1235
Kzo9I	GATC	7 cut(s)	430, 610, 652, 737, 1466, 1667, 1808
LmnI	GCTCC	3 cut(s)	591, 1045, 1603
Lsp1109I	GCAGC	6 cut(s)	521, 541, 606, 1000, 1557, 1809
LweI	GCATC	3 cut(s)	422, 1690, 1914
MaeI	CTAG	3 cut(s)	1404, 1827, 1866
MaeIII	GTNAC	4 cut(s)	11, 472, 972, 1141
MalI	GATC	7 cut(s)	432, 612, 654, 739, 1468, 1669, 1810
MboI	GATC	7 cut(s)	430, 610, 652, 737, 1466, 1667, 1808
MflI	RGATCY	3 cut(s)	610, 1667, 1808
MhlI	GDGCHC	1 cut(s)	1658
MluCI	AATT	7 cut(s)	56, 700, 759, 954, 1029, 1560, 1676
Mly113I	GGCGCC	2 cut(s)	1418, 1571
MlyI	GAGTC	3 cut(s)	338, 626, 1561
MmeI	TCCRAC	3 cut(s)	1023, 1373, 1376
Mph1103I	ATGCAT	1 cut(s)	10
MroI	TCCGGA	1 cut(s)	649
MroNI	GCCGGC	2 cut(s)	1372, 1447
MseI	TTAA	6 cut(s)	60, 215, 762, 1559, 1635, 1839
MspA1I	CMGCKG	5 cut(s)	512, 1234, 1414, 1542, 1800
MspR9I	CCNGG	4 cut(s)	93, 425, 563, 608
Mva1269I	GAATGC	2 cut(s)	10, 435
MvaI	CCWGG	1 cut(s)	425
MvnI	CGCG	3 cut(s)	488, 1234, 1623
MwoI	GCNNNNNNNGC	9 cut(s)	195, 625, 817, 820, 1006, 1240, 1378, 1800, 1803
NaeI	GCCGGC	2 cut(s)	1374, 1449
NarI	GGCGCC	2 cut(s)	1418, 1571
NciI	CCSGG	3 cut(s)	93, 563, 608
NcoI	CCATGG	1 cut(s)	193
NdeII	GATC	7 cut(s)	430, 610, 652, 737, 1466, 1667, 1808
NgoMIV	GCCGGC	2 cut(s)	1372, 1447
NlaIII	CATG	3 cut(s)	12, 184, 197
NlaIV	GGNNCC	5 cut(s)	560, 1047, 1150, 1419, 1572
NmuCI	GTSAC	2 cut(s)	972, 1141
NsiI	ATGCAT	1 cut(s)	10
NspI	RCATGY	1 cut(s)	12
NspV	TTCGAA	2 cut(s)	690, 967
PceI	AGGCCT	1 cut(s)	1009
PcsI	WCGNNNNNNNCGW	4 cut(s)	687, 875, 977, 1692
PctI	GAATGC	2 cut(s)	10, 435
PdiI	GCCGGC	2 cut(s)	1374, 1449
PfeI	GAWTC	3 cut(s)	500, 769, 1036
PflFI	GACNNNGTC	1 cut(s)	1504
PinAI	ACCGGT	1 cut(s)	1145
PleI	GAGTC	3 cut(s)	338, 626, 1560
PluTI	GGCGCC	2 cut(s)	1421, 1574
PpsI	GAGTC	3 cut(s)	338, 626, 1560
Ppu21I	YACGTR	1 cut(s)	1712
PpuMI	RGGWCCY	1 cut(s)	558
Psp124BI	GAGCTC	1 cut(s)	1658
Psp1406I	AACGTT	2 cut(s)	39, 963
Psp5II	RGGWCCY	1 cut(s)	558
Psp6I	CCWGG	1 cut(s)	423
PspEI	GGTNACC	1 cut(s)	1141
PspFI	CCCAGC	1 cut(s)	512
PspGI	CCWGG	1 cut(s)	423
PspN4I	GGNNCC	5 cut(s)	560, 1047, 1150, 1419, 1572
PspPI	GGNCC	1 cut(s)	558
PspPPI	RGGWCCY	1 cut(s)	558
PsuI	RGATCY	3 cut(s)	610, 1667, 1808
PsyI	GACNNNGTC	1 cut(s)	1504
PvuII	CAGCTG	1 cut(s)	512
RsaI	GTAC	6 cut(s)	90, 749, 789, 1150, 1523, 1746
RsaNI	GTAC	6 cut(s)	89, 748, 788, 1149, 1522, 1745
SacI	GAGCTC	1 cut(s)	1658
SacII	CCGCGG	1 cut(s)	1235
SaqAI	TTAA	6 cut(s)	60, 215, 762, 1559, 1635, 1839
Sau3AI	GATC	7 cut(s)	430, 610, 652, 737, 1466, 1667, 1808
Sau96I	GGNCC	1 cut(s)	558
SchI	GAGTC	3 cut(s)	338, 626, 1561
ScrFI	CCNGG	4 cut(s)	93, 425, 563, 608
SduI	GDGCHC	1 cut(s)	1658
SfaNI	GCATC	3 cut(s)	422, 1690, 1914
SfoI	GGCGCC	2 cut(s)	1419, 1572
Sfr303I	CCGCGG	1 cut(s)	1235
SfuI	TTCGAA	2 cut(s)	690, 967
SgrBI	CCGCGG	1 cut(s)	1235
SinI	GGWCC	1 cut(s)	558
SmlI	CTYRAG	1 cut(s)	1889
SmoI	CTYRAG	1 cut(s)	1889
SpeI	ACTAGT	1 cut(s)	1403
Sse9I	AATT	7 cut(s)	56, 700, 759, 954, 1029, 1560, 1676
SseBI	AGGCCT	1 cut(s)	1009
SspDI	GGCGCC	2 cut(s)	1417, 1570
SspI	AATATT	1 cut(s)	451
SspMI	CTAG	3 cut(s)	1404, 1827, 1866
SstI	GAGCTC	1 cut(s)	1658
StuI	AGGCCT	1 cut(s)	1009
StyD4I	CCNGG	4 cut(s)	91, 423, 561, 606
StyI	CCWWGG	2 cut(s)	193, 1004
TaaI	ACNGT	3 cut(s)	204, 225, 1171
TaqI	TCGA	7 cut(s)	400, 681, 690, 892, 967, 1340, 1508
TaqII	GACCGA	1 cut(s)	1029
TasI	AATT	7 cut(s)	56, 700, 759, 954, 1029, 1560, 1676
TatI	WGTACW	1 cut(s)	1744
TfiI	GAWTC	3 cut(s)	500, 769, 1036
Tru1I	TTAA	6 cut(s)	60, 215, 762, 1559, 1635, 1839
Tru9I	TTAA	6 cut(s)	60, 215, 762, 1559, 1635, 1839
TscAI	CASTG	4 cut(s)	642, 1486, 1572, 1777
TseFI	GTSAC	2 cut(s)	972, 1141
TseI	GCWGC	6 cut(s)	509, 529, 594, 1013, 1545, 1797
Tsp45I	GTSAC	2 cut(s)	972, 1141
TspDTI	ATGAA	4 cut(s)	17, 1277, 1849, 1913
TspGWI	ACGGA	4 cut(s)	926, 1545, 1657, 1804
TspRI	CASTG	4 cut(s)	642, 1486, 1572, 1777
Tth111I	GACNNNGTC	1 cut(s)	1504
VpaK11BI	GGWCC	1 cut(s)	558
XapI	RAATTY	1 cut(s)	56
XceI	RCATGY	1 cut(s)	12
XspI	CTAG	3 cut(s)	1404, 1827, 1866
Zsp2I	ATGCAT	1 cut(s)	10

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.