Rroxscaffold_2G00147450

Hydroxyproline-rich glycoprotein family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0012501
Physical Location & Seq
Reverse (-)
85275342 .. 85276988
1647 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00147450.1

Sequence Viewer

Length: 1647 bp
ATGCCTCGCCGTCACCAATCACCCTCTCCGCTCCTCTCTCTGCCGGTTCTCATCATCCTCCTCCCCACCATCATCTTACTCTTTCTCATCTACACCATCCCTCCACTTCTATCCCTCACCTCCCAACTCCTCCAGCCCACCCTATCCGTCAAGAAAAGCTGGGACTCCCTCAACGTCTTCCTCGTCGTCTTCGCTATTCTCTGCGGCGTTTTCGCTAGAAAAAACGACGACGGCTTGCCTGATCCCGACGACGATCACATCCATATTCACAATGCTTCCGACCCTTCGGCCATTAACAGAACCACCTCATCTCCACAATCAGAACCAGCACTTCTTATTCCGCAGCAACAATGGTTTGGATACTCGGAGAGAACGTCCAAGATGTATGACACTCCGGTTAGGACCCCGGAAAACGTCGGCGGCGGCCGGTTGAGGAGGAGAAGCTCGTACCCGGATCTGAGGCAAGCTGAGTCTCTGTGGCAAACTGTAGATGATGATCAAAGTAAGTCTCAGTTTCGTTTCTTTGATGACTTCGAAATAAGCAATTATAGAACTCACCGACACCACAGAGAGAGCAGCTCCGACGATGTTAAGGAGATTCCGGTGGATACTTTCGTACTTCAATCTTCTTCGCCGGCTTCAAAGCCCCCGGCGACATCGCCGCCACCACCTCCGCCTCCTCCGCCGCGTCATGAGAAACAAAGGACGTATGAGACGGTTGGTCGACGTAAAGTGGAGGAGGTGAAAGTCGAGGAAGTTCGATCTACGCCGCCACCGACACCTCCGCCTCCACCGCCTTCACGGCCAGTAGCTCCGCCGTCGCCAATGCGGGTTAGATCGGACCAGAAGCACGGGAGGCTTGAACGGAGGAAGAGTAACGTGAAGAAGGAGATAGCGATGGTATGGAATTCAGTTCTGTCCAATCAGAGAAAGAGAAAGAGGAAGCAGAAGGCTACAAGAAACAACATTTACGATACTGCCACTCCGGAAACTCCGCCGGAACAACCGCAACCGCCGCCGCCTCCACCTCCTCCGCCGCCTTCTTCTGTTTTTCATAATTTATTCAAGAAGGGAAGCAAAACTAAAAAGGTACATTCGGTCTCAACCACAGCACCACCACCTCCGCCGCCTCCGCCGCCGACAGTTTCAGCACGAAAACATCAAAACCGGAGCTCTAAGCCGCCACCGGCAACGGCCCCGACAACCCCGCCGCGTCCACCGCCGGCAGCACACTCCCGGCGCCGGCCACCATTGCCGACAAAACCAAGCACCTCCTACGAGGACAATGTGAACAGCGGCTGCCAGAGCCCTCTGATTCCGATTCCGCCGCCGCCTCCGCCGTTCAAAATGCCGGAGCTGAAGTTTTTCGTGAAGGGAGACTTTGTTAAGATACGGAGCGCCCAGAGCTCCCGGTGTGGGTCCCCTGAACCTGAGGAGGAAGACGATGCAATGCCAGGTGGCAAGGGAGAGTCACAGTCATCGACAGTGGAGATAACCGACGGTGGAGATGGAGCTGGTCGCGGGTCGCCGTCGGTGTTCTGCCCCAGCCCTGATGTTAACACGAAAGCTGACAACTTCATTGCGAGGCTTAGAGATGAGTGGAGGCTCGAGAAGATGAACTCACTCAGGGAAAAGAAGGTGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231
Pfam Domains
Protein Families
DUF761

Protein Analysis

548

Amino Acids

61.02

Weight (kDa)

9.81

Isoelectric Point (pI)

89.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF761 PF05553 517 - 543 9.6e-06 Cotton fibre expressed protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1239
AccBSI CCGCTC 1 cut(s) 31
AccI GTMKAC 1 cut(s) 724
AccII CGCG 3 cut(s) 688, 1213, 1521
AccIII TCCGGA 1 cut(s) 985
AclWI GGATC 2 cut(s) 236, 462
AcoI YGGCCR 4 cut(s) 288, 424, 803, 1244
AcsI RAATTY 1 cut(s) 907
AcuI CTGAAG 1 cut(s) 1379
AcyI GRCGYC 1 cut(s) 1240
AfaI GTAC 3 cut(s) 449, 618, 1092
AfiI CCNNNNNNNGG 2 cut(s) 1242, 1416
AgsI TTSAA 5 cut(s) 623, 642, 863, 1066, 1345
AhdI GACNNNNNGTC 1 cut(s) 720
AjnI CCWGG 1 cut(s) 1453
Alw21I GWGCWC 2 cut(s) 1175, 1409
Alw26I GTCTC 5 cut(s) 477, 513, 707, 1105, 1371
AlwI GGATC 2 cut(s) 236, 462
AlwNI CAGNNNCTG 1 cut(s) 1299
Ama87I CYCGRG 1 cut(s) 1607
Aor13HI TCCGGA 1 cut(s) 985
AoxI GGCC 5 cut(s) 288, 424, 803, 1194, 1244
ApeKI GCWGC 4 cut(s) 343, 576, 1226, 1299
ApoI RAATTY 1 cut(s) 907
Asp700I GAANNNNTTC 1 cut(s) 1364
AspLEI GCGC 2 cut(s) 1242, 1400
AspS9I GGNCC 4 cut(s) 402, 841, 1195, 1419
AsuC2I CCSGG 5 cut(s) 407, 452, 650, 1237, 1411
AsuHPI GGTGA 5 cut(s) 5, 12, 109, 548, 754
AsuII TTCGAA 1 cut(s) 534
AvaI CYCGRG 1 cut(s) 1607
AvaII GGWCC 3 cut(s) 402, 841, 1419
AxyI CCTNAGG 1 cut(s) 1431
BaeI ACNNNNGTAYC 2 cut(s) 600, 633
BanI GGYRCC 1 cut(s) 1239
BanII GRGCYC 3 cut(s) 1175, 1310, 1409
BbsI GAAGAC 3 cut(s) 169, 181, 1446
Bbv12I GWGCWC 2 cut(s) 1175, 1409
BbvI GCAGC 4 cut(s) 355, 588, 1238, 1286
BccI CCATC 4 cut(s) 77, 104, 892, 1502
BceAI ACGGC 6 cut(s) 247, 802, 818, 1209, 1324, 1513
BciT130I CCWGG 1 cut(s) 1455
BciVI GTATCC 2 cut(s) 353, 601
BclI TGATCA 1 cut(s) 496
BcnI CCSGG 5 cut(s) 407, 452, 650, 1237, 1411
BcoDI GTCTC 5 cut(s) 477, 513, 707, 1105, 1371
BfaI CTAG 1 cut(s) 216
BfmI CTRYAG 1 cut(s) 486
BfoI RGCGCY 2 cut(s) 1243, 1401
BfuI GTATCC 2 cut(s) 353, 601
BglI GCCNNNNNGGC 1 cut(s) 802
Bme1390I CCNGG 6 cut(s) 407, 452, 650, 1237, 1411, 1455
Bme18I GGWCC 3 cut(s) 402, 841, 1419
BmeRI GACNNNNNGTC 1 cut(s) 720
BmeT110I CYCGRG 1 cut(s) 1607
BmgT120I GGNCC 4 cut(s) 402, 841, 1195, 1419
BmiI GGNNCC 5 cut(s) 404, 1197, 1241, 1420, 1421
BmrFI CCNGG 6 cut(s) 407, 452, 650, 1237, 1411, 1455
BmsI GCATC 1 cut(s) 1435
BpiI GAAGAC 3 cut(s) 169, 181, 1446
BplI GAGNNNNNCTC 2 cut(s) 563, 595
BpmI CTGGAG 1 cut(s) 116
Bpu14I TTCGAA 1 cut(s) 534
BpuMI CCSGG 5 cut(s) 407, 452, 650, 1237, 1411
BsaBI GATNNNNATC 1 cut(s) 495
BsaHI GRCGYC 1 cut(s) 1240
BsaI GGTCTC 1 cut(s) 1105
BsaJI CCNNGG 2 cut(s) 405, 648
BsaWI WCCGGW 4 cut(s) 394, 601, 985, 1167
Bsc4I CCNNNNNNNGG 2 cut(s) 1242, 1416
Bse118I RCCGGY 6 cut(s) 43, 426, 634, 1186, 1222, 1242
Bse1I ACTGG 1 cut(s) 806
Bse21I CCTNAGG 1 cut(s) 1431
Bse3DI GCAATG 3 cut(s) 1250, 1455, 1578
Bse8I GATNNNNATC 1 cut(s) 495
BseAI TCCGGA 1 cut(s) 985
BseBI CCWGG 1 cut(s) 1455
BseDI CCNNGG 2 cut(s) 405, 648
BseGI GGATG 3 cut(s) 54, 96, 258
BseJI GATNNNNATC 1 cut(s) 495
BseLI CCNNNNNNNGG 2 cut(s) 1242, 1416
BseMI GCAATG 3 cut(s) 1250, 1455, 1578
BseMII CTCAG 5 cut(s) 449, 459, 524, 1422, 1639
BseNI ACTGG 1 cut(s) 806
BseRI GAGGAG 9 cut(s) 23, 50, 119, 448, 451, 669, 752, 1020, 1448
BseX3I CGGCCG 1 cut(s) 424
BseXI GCAGC 4 cut(s) 355, 588, 1238, 1286
BseYI CCCAGC 2 cut(s) 159, 1544
Bsh1236I CGCG 3 cut(s) 688, 1213, 1521
Bsh1285I CGRYCG 1 cut(s) 427
BshFI GGCC 5 cut(s) 290, 426, 805, 1196, 1246
BshNI GGYRCC 1 cut(s) 1239
BsiEI CGRYCG 1 cut(s) 427
BsiHKAI GWGCWC 2 cut(s) 1175, 1409
BsiHKCI CYCGRG 1 cut(s) 1607
BslFI GGGAC 2 cut(s) 176, 1405
BslI CCNNNNNNNGG 2 cut(s) 1242, 1416
BsmAI GTCTC 5 cut(s) 477, 513, 707, 1105, 1371
BsmBI CGTCTC 1 cut(s) 707
BsmFI GGGAC 2 cut(s) 176, 1405
BsnI GGCC 5 cut(s) 290, 426, 805, 1196, 1246
Bso31I GGTCTC 1 cut(s) 1105
BsoBI CYCGRG 1 cut(s) 1607
Bsp119I TTCGAA 1 cut(s) 534
Bsp1286I GDGCHC 3 cut(s) 1175, 1310, 1409
Bsp13I TCCGGA 1 cut(s) 985
Bsp143I GATC 6 cut(s) 241, 253, 454, 496, 761, 836
BspANI GGCC 5 cut(s) 290, 426, 805, 1196, 1246
BspCNI CTCAG 5 cut(s) 450, 460, 523, 1423, 1638
BspEI TCCGGA 1 cut(s) 985
BspFNI CGCG 3 cut(s) 688, 1213, 1521
BspHI TCATGA 1 cut(s) 691
BspLI GGNNCC 5 cut(s) 404, 1197, 1241, 1420, 1421
BspPI GGATC 2 cut(s) 236, 462
BspT104I TTCGAA 1 cut(s) 534
BspT107I GGYRCC 1 cut(s) 1239
BspTNI GGTCTC 1 cut(s) 1105
BsrBI CCGCTC 1 cut(s) 31
BsrDI GCAATG 3 cut(s) 1250, 1455, 1578
BsrFI RCCGGY 6 cut(s) 43, 426, 634, 1186, 1222, 1242
BsrI ACTGG 1 cut(s) 806
BssAI RCCGGY 6 cut(s) 43, 426, 634, 1186, 1222, 1242
BssECI CCNNGG 2 cut(s) 405, 648
BssMI GATC 6 cut(s) 241, 253, 454, 496, 761, 836
BssNI GRCGYC 1 cut(s) 1240
Bst2UI CCWGG 1 cut(s) 1455
Bst4CI ACNGT 6 cut(s) 487, 718, 1144, 1476, 1486, 1502
Bst6I CTCTTC 1 cut(s) 866
BstACI GRCGYC 1 cut(s) 1240
BstBI TTCGAA 1 cut(s) 534
BstC8I GCNNGC 5 cut(s) 236, 465, 636, 1224, 1244
BstDEI CTNAG 7 cut(s) 458, 468, 510, 1176, 1431, 1589, 1625
BstF5I GGATG 3 cut(s) 54, 96, 258
BstFNI CGCG 3 cut(s) 688, 1213, 1521
BstH2I RGCGCY 2 cut(s) 1243, 1401
BstHHI GCGC 2 cut(s) 1242, 1400
BstKTI GATC 6 cut(s) 244, 256, 457, 499, 764, 839
BstMAI GTCTC 5 cut(s) 477, 513, 707, 1105, 1371
BstMBI GATC 6 cut(s) 241, 253, 454, 496, 761, 836
BstMCI CGRYCG 1 cut(s) 427
BstNI CCWGG 1 cut(s) 1455
BstSCI CCNGG 6 cut(s) 405, 450, 648, 1235, 1409, 1453
BstSFI CTRYAG 1 cut(s) 486
BstUI CGCG 3 cut(s) 688, 1213, 1521
BstV1I GCAGC 4 cut(s) 355, 588, 1238, 1286
BstV2I GAAGAC 3 cut(s) 169, 181, 1446
BstX2I RGATCY 1 cut(s) 454
BstYI RGATCY 1 cut(s) 454
BstZI CGGCCG 1 cut(s) 424
Bsu36I CCTNAGG 1 cut(s) 1431
BsuI GTATCC 2 cut(s) 353, 601
BsuRI GGCC 5 cut(s) 290, 426, 805, 1196, 1246
BtgZI GCGATG 2 cut(s) 642, 911
BtsCI GGATG 3 cut(s) 54, 96, 258
BtsIMutI CAGTG 1 cut(s) 1491
Cac8I GCNNGC 5 cut(s) 236, 465, 636, 1224, 1244
CaiI CAGNNNCTG 1 cut(s) 1299
CciI TCATGA 1 cut(s) 691
CfoI GCGC 2 cut(s) 1242, 1400
Cfr10I RCCGGY 6 cut(s) 43, 426, 634, 1186, 1222, 1242
Cfr13I GGNCC 4 cut(s) 402, 841, 1195, 1419
CseI GACGC 2 cut(s) 677, 1202
Csp6I GTAC 3 cut(s) 448, 617, 1091
CviAII CATG 1 cut(s) 692
CviQI GTAC 3 cut(s) 448, 617, 1091
DdeI CTNAG 7 cut(s) 458, 468, 510, 1176, 1431, 1589, 1625
DinI GGCGCC 1 cut(s) 1241
DpnI GATC 6 cut(s) 243, 255, 456, 498, 763, 838
DpnII GATC 6 cut(s) 241, 253, 454, 496, 761, 836
DriI GACNNNNNGTC 1 cut(s) 720
EaeI YGGCCR 4 cut(s) 288, 424, 803, 1244
EagI CGGCCG 1 cut(s) 424
Eam1104I CTCTTC 1 cut(s) 866
Eam1105I GACNNNNNGTC 1 cut(s) 720
EarI CTCTTC 1 cut(s) 866
Ecl136II GAGCTC 2 cut(s) 1173, 1407
EclXI CGGCCG 1 cut(s) 424
Eco24I GRGCYC 3 cut(s) 1175, 1310, 1409
Eco31I GGTCTC 1 cut(s) 1105
Eco47I GGWCC 3 cut(s) 402, 841, 1419
Eco52I CGGCCG 1 cut(s) 424
Eco53kI GAGCTC 2 cut(s) 1173, 1407
Eco57I CTGAAG 1 cut(s) 1379
Eco81I CCTNAGG 1 cut(s) 1431
Eco88I CYCGRG 1 cut(s) 1607
EcoICRI GAGCTC 2 cut(s) 1173, 1407
EcoO109I RGGNCCY 2 cut(s) 402, 1419
EcoRI GAATTC 1 cut(s) 907
EcoRII CCWGG 1 cut(s) 1453
EcoT38I GRGCYC 3 cut(s) 1175, 1310, 1409
EgeI GGCGCC 1 cut(s) 1241
EheI GGCGCC 1 cut(s) 1241
Esp3I CGTCTC 1 cut(s) 707
FaeI CATG 1 cut(s) 695
FaiI YATR 7 cut(s) 264, 387, 549, 693, 711, 904, 1056
FalI AAGNNNNNCTT 2 cut(s) 1364, 1396
FaqI GGGAC 2 cut(s) 176, 1405
FatI CATG 1 cut(s) 691
FauI CCCGC 3 cut(s) 822, 1215, 1514
FbaI TGATCA 1 cut(s) 496
FblI GTMKAC 1 cut(s) 724
FokI GGATG 3 cut(s) 41, 83, 245
FriOI GRGCYC 3 cut(s) 1175, 1310, 1409
FspBI CTAG 1 cut(s) 216
GlaI GCGC 2 cut(s) 1241, 1399
GsaI CCCAGC 2 cut(s) 163, 1548
GsuI CTGGAG 1 cut(s) 116
HaeII RGCGCY 2 cut(s) 1243, 1401
HaeIII GGCC 5 cut(s) 290, 426, 805, 1196, 1246
HgaI GACGC 2 cut(s) 677, 1202
HhaI GCGC 2 cut(s) 1242, 1400
Hin1I GRCGYC 1 cut(s) 1240
Hin1II CATG 1 cut(s) 695
Hin6I GCGC 2 cut(s) 1240, 1398
HinP1I GCGC 2 cut(s) 1240, 1398
HincII GTYRAC 2 cut(s) 725, 1558
HindII GTYRAC 2 cut(s) 725, 1558
HinfI GANTC 6 cut(s) 164, 470, 598, 1315, 1321, 1469
HpaI GTTAAC 1 cut(s) 1558
HphI GGTGA 5 cut(s) 5, 12, 109, 548, 754
Hpy166II GTNNAC 4 cut(s) 725, 1217, 1291, 1558
Hpy188I TCNGA 9 cut(s) 280, 322, 367, 459, 583, 841, 927, 1314, 1320
Hpy188III TCNNGA 7 cut(s) 151, 245, 692, 986, 1066, 1369, 1609
Hpy8I GTNNAC 4 cut(s) 725, 1217, 1291, 1558
HpyAV CCTTC 8 cut(s) 294, 807, 880, 943, 1050, 1063, 1366, 1630
HpyCH4III ACNGT 6 cut(s) 487, 718, 1144, 1476, 1486, 1502
HpyCH4IV ACGT 6 cut(s) 174, 374, 414, 707, 727, 879
HpyCH4V TGCA 1 cut(s) 1448
HpyF3I CTNAG 7 cut(s) 458, 468, 510, 1176, 1431, 1589, 1625
HpySE526I ACGT 6 cut(s) 174, 374, 414, 707, 727, 879
Hsp92I GRCGYC 1 cut(s) 1240
Hsp92II CATG 1 cut(s) 695
HspAI GCGC 2 cut(s) 1240, 1398
KasI GGCGCC 1 cut(s) 1239
KflI GGGWCCC 1 cut(s) 1419
Kpn2I TCCGGA 1 cut(s) 985
KroI GCCGGC 3 cut(s) 634, 1222, 1242
KroNI GCCGGC 3 cut(s) 636, 1224, 1244
Ksp22I TGATCA 1 cut(s) 496
KspAI GTTAAC 1 cut(s) 1558
Kzo9I GATC 6 cut(s) 241, 253, 454, 496, 761, 836
LmnI GCTCC 8 cut(s) 36, 584, 817, 1170, 1354, 1395, 1412, 1511
Lsp1109I GCAGC 4 cut(s) 355, 588, 1238, 1286
LweI GCATC 1 cut(s) 1435
MaeI CTAG 1 cut(s) 216
MaeII ACGT 6 cut(s) 174, 374, 414, 707, 727, 879
MaeIII GTNAC 3 cut(s) 11, 875, 1470
MalI GATC 6 cut(s) 243, 255, 456, 498, 763, 838
MbiI CCGCTC 1 cut(s) 31
MboI GATC 6 cut(s) 241, 253, 454, 496, 761, 836
MboII GAAGA 9 cut(s) 169, 181, 618, 621, 883, 895, 1035, 1451, 1624
MflI RGATCY 1 cut(s) 454
MhlI GDGCHC 3 cut(s) 1175, 1310, 1409
MluCI AATT 3 cut(s) 544, 907, 1057
Mly113I GGCGCC 1 cut(s) 1240
MlyI GAGTC 3 cut(s) 158, 479, 1478
MmeI TCCRAC 2 cut(s) 303, 606
MroI TCCGGA 1 cut(s) 985
MroNI GCCGGC 3 cut(s) 634, 1222, 1242
MroXI GAANNNNTTC 1 cut(s) 1364
MseI TTAA 4 cut(s) 294, 591, 1386, 1557
MspA1I CMGCKG 1 cut(s) 1296
MspR9I CCNGG 6 cut(s) 407, 452, 650, 1237, 1411, 1455
MvaI CCWGG 1 cut(s) 1455
MvnI CGCG 3 cut(s) 688, 1213, 1521
NaeI GCCGGC 3 cut(s) 636, 1224, 1244
NarI GGCGCC 1 cut(s) 1240
NciI CCSGG 5 cut(s) 407, 452, 650, 1237, 1411
NdeII GATC 6 cut(s) 241, 253, 454, 496, 761, 836
NgoMIV GCCGGC 3 cut(s) 634, 1222, 1242
NlaIII CATG 1 cut(s) 695
NlaIV GGNNCC 5 cut(s) 404, 1197, 1241, 1420, 1421
NmuCI GTSAC 2 cut(s) 11, 1470
NspV TTCGAA 1 cut(s) 534
PaeR7I CTCGAG 1 cut(s) 1607
PagI TCATGA 1 cut(s) 691
PcsI WCGNNNNNNNCGW 3 cut(s) 180, 371, 773
PdiI GCCGGC 3 cut(s) 636, 1224, 1244
PdmI GAANNNNTTC 1 cut(s) 1364
PfeI GAWTC 3 cut(s) 598, 1315, 1321
PleI GAGTC 3 cut(s) 158, 478, 1477
PluTI GGCGCC 1 cut(s) 1243
PpsI GAGTC 3 cut(s) 158, 478, 1477
PpuMI RGGWCCY 2 cut(s) 402, 1419
Psp124BI GAGCTC 2 cut(s) 1175, 1409
Psp5II RGGWCCY 2 cut(s) 402, 1419
Psp6I CCWGG 1 cut(s) 1453
PspFI CCCAGC 2 cut(s) 159, 1544
PspGI CCWGG 1 cut(s) 1453
PspN4I GGNNCC 5 cut(s) 404, 1197, 1241, 1420, 1421
PspPI GGNCC 4 cut(s) 402, 841, 1195, 1419
PspPPI RGGWCCY 2 cut(s) 402, 1419
PstNI CAGNNNCTG 1 cut(s) 1299
PsuI RGATCY 1 cut(s) 454
RsaI GTAC 3 cut(s) 449, 618, 1092
RsaNI GTAC 3 cut(s) 448, 617, 1091
SacI GAGCTC 2 cut(s) 1175, 1409
SalI GTCGAC 1 cut(s) 723
SaqAI TTAA 4 cut(s) 294, 591, 1386, 1557
Sau3AI GATC 6 cut(s) 241, 253, 454, 496, 761, 836
Sau96I GGNCC 4 cut(s) 402, 841, 1195, 1419
SchI GAGTC 3 cut(s) 158, 479, 1478
ScrFI CCNGG 6 cut(s) 407, 452, 650, 1237, 1411, 1455
SduI GDGCHC 3 cut(s) 1175, 1310, 1409
SfaNI GCATC 1 cut(s) 1435
SfcI CTRYAG 1 cut(s) 486
SfoI GGCGCC 1 cut(s) 1241
Sfr274I CTCGAG 1 cut(s) 1607
SfuI TTCGAA 1 cut(s) 534
SinI GGWCC 3 cut(s) 402, 841, 1419
SlaI CTCGAG 1 cut(s) 1607
SmlI CTYRAG 1 cut(s) 1607
SmoI CTYRAG 1 cut(s) 1607
Sse9I AATT 3 cut(s) 544, 907, 1057
SspDI GGCGCC 1 cut(s) 1239
SspMI CTAG 1 cut(s) 216
SstI GAGCTC 2 cut(s) 1175, 1409
StyD4I CCNGG 6 cut(s) 405, 450, 648, 1235, 1409, 1453
TaaI ACNGT 6 cut(s) 487, 718, 1144, 1476, 1486, 1502
TaiI ACGT 6 cut(s) 177, 377, 417, 710, 730, 882
TaqI TCGA 6 cut(s) 534, 724, 750, 760, 1481, 1608
TaqII GACCGA 1 cut(s) 1087
TasI AATT 3 cut(s) 544, 907, 1057
TfiI GAWTC 3 cut(s) 598, 1315, 1321
Tru1I TTAA 4 cut(s) 294, 591, 1386, 1557
Tru9I TTAA 4 cut(s) 294, 591, 1386, 1557
TscAI CASTG 1 cut(s) 1491
TseFI GTSAC 2 cut(s) 11, 1470
TseI GCWGC 4 cut(s) 343, 576, 1226, 1299
Tsp45I GTSAC 2 cut(s) 11, 1470
TspDTI ATGAA 3 cut(s) 1043, 1567, 1631
TspGWI ACGGA 3 cut(s) 136, 880, 1408
TspRI CASTG 1 cut(s) 1491
VpaK11BI GGWCC 3 cut(s) 402, 841, 1419
XapI RAATTY 1 cut(s) 907
XhoI CTCGAG 1 cut(s) 1607
XmiI GTMKAC 1 cut(s) 724
XmnI GAANNNNTTC 1 cut(s) 1364
XspI CTAG 1 cut(s) 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.