MD15G1212500.v1.1

Hydroxyproline-rich glycoprotein family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0012501
Physical Location & Seq
Forward (+)
17064967 .. 17066721
1755 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1212500.v1.1.491

Sequence Viewer

Length: 1755 bp
ATGCCTCGCCGCCATGGCTCACCGTCTCCGCTTTTAAGTCCACCGTTGCTCATCATCCTCTTCCCCATCATCATCTCACTCATCCTCTTCTATACCATCCCTCCATTCCTATCTCTCACCTCTCAACTCCTCCGCCCCACCATTTCTGTCAAGAAAAGTTGGGACTCCCTCAATGTGTTTCTCGTCATTTTCGCAATCCTATGCGGCGTTTTCGCCAAGCGAAACGAAGACGCATCACCTACCGAGGAAGATCGCATTCCCGACAATAATATTCCACACCCTTTGGACAAAGTAACTACAAACAGCGCGAACATATCGGAATCGGAAGCAGCTGGGTCTGTACTTCCGCAGCAATGGTTTGGATATTCAGAGAGGAGGACGCCGGAAATCGGTGGTGGCCGGTTGAGGAGGAGCAGCAGCTCCTACCCGGATCTGAGGCAACTCGGGCAAGACTCAGTGTGGGAAACTCCGGATCACAACAAGCCGCAGTTCCGCTTCTTCGACGACTTCGAAATCGGCAATTACAATCGTGCCCCGTCAACTTCACACCAACGCCGATCCGAGGAGTACTCAGATGTGATTAAGGAGATTCCGGTGGATACTTTCGTACCTTACTCTTCTCATCCCCCGCCGCAAAAGTCGCCAACACCGACACCTCCACCGCCGCCTCCACCACGTCAACAAAAAACGAGAAGGACGTATCAGACCGTTGGACGTAAAGATCCAAAAACGGGGAAAGTAGTGAATAAGCATATTACTGAAGAGGGTGAAGAAATTGAGGATGTTCGAACTCCACCACCGACGCCTCCACCTCCTCCGCCGCCAAGGCCTGCTGCCCCGCCATCGCCAATTCGGATTCGGTCGGAGCCGAAACGCAGGAAGAGTAATGTGAAGAAGGAGATAGCGATGGTTTGGGCTTCGGTTCTGTCTAATCAGAGAAAGAGGAAGAAGAAGCACAAGGTCACCGGTACCAGAAACATTTACGAAACTGCTGCTTCTCTGCCTGAACACCAACGACAAGGAGGAGAAGGAGAATACTTTTTCACAAGACCGCCGCCGTCGCCACCTCCTCCACCACCACCCCCGCCGCCGCCACATTCTGTGTTTCATAATCTGTTCAAAAAGGGAATGAGCAAAACTAAGAAAGTTCACTCGGTCTCGACACCTCCAACTCCACCACCACCACCACCACAGCCGGCATTGCGAAAACAAAAGAGTTGGAATACTAGTTTCCCGCTGGCGCCACCAACTCCGCCGCAACAACCACCTCCGGCTACTTCCCGGCGACGATCTTCCGCCTCCAGTGGCCGCCCGCCGTTGCCGACTAAGTCGAGCACTTATCTGTACGAGGAAAACGTAAACAGCGGCAGCCAGAGTCCTTTAATTCCGGTGGCGCCGCCACCTCCTCCGCCGTTCAAAATGCCGGATCTGAAGTTTTTTGTGCGCGGGGATTTTGTTAAGATAAGGAGCGCGGAGAGCTCACGCTGTGGATCTCCTGAATTGGAGGACGTTGATGACGTTGATGCGTGGCCACGTAAGGAAGAAGACTTGAAGTCAAAGTCAGAAGTACAGAGAAAAGTCAACGTGATGGACAGTGGAGATGGCGGCGGTGGTGGCGGCAGCAGCGGCAGATCCTCCGTGTTCTGCCCTAGCCCAGATGTTAATACGAAAGCTGATAACTTCATTGCTAGGCTGAGAGATGAGTGGAAGCTTGAGAAGATGAACTCAATGAGGCAGAAAAAGAAGATGCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231
Pfam Domains
Protein Families
DUF761

Protein Analysis

585

Amino Acids

65.16

Weight (kDa)

9.89

Isoelectric Point (pI)

85.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF761 PF05553 552 - 583 2e-06 Cotton fibre expressed protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 968
AccB1I GGYRCC 3 cut(s) 968, 1240, 1393
AccII CGCG 3 cut(s) 308, 1446, 1472
AccIII TCCGGA 1 cut(s) 469
AclWI GGATC 7 cut(s) 438, 480, 552, 716, 1434, 1498, 1626
AcoI YGGCCR 3 cut(s) 397, 1306, 1529
AcuI CTGAAG 2 cut(s) 780, 1451
AcyI GRCGYC 4 cut(s) 380, 803, 1241, 1394
AdeI CACNNNGTG 1 cut(s) 1487
AfaI GTAC 6 cut(s) 342, 569, 609, 970, 1346, 1569
AfiI CCNNNNNNNGG 3 cut(s) 389, 562, 731
AgeI ACCGGT 1 cut(s) 965
AgsI TTSAA 3 cut(s) 1120, 1417, 1552
AhdI GACNNNNNGTC 1 cut(s) 1552
AhlI ACTAGT 1 cut(s) 1226
AjiI CACGTC 1 cut(s) 677
AluBI AGCT 5 cut(s) 332, 420, 1479, 1673, 1711
AluI AGCT 5 cut(s) 332, 420, 1479, 1673, 1711
Alw21I GWGCWC 2 cut(s) 1337, 1481
Alw26I GTCTC 2 cut(s) 30, 1162
AlwI GGATC 7 cut(s) 438, 480, 552, 716, 1434, 1498, 1626
Ama87I CYCGRG 1 cut(s) 443
Aor13HI TCCGGA 1 cut(s) 469
AoxI GGCC 4 cut(s) 397, 827, 1306, 1529
ApeKI GCWGC 9 cut(s) 329, 349, 414, 417, 833, 992, 1368, 1620, 1623
AsiGI ACCGGT 1 cut(s) 965
Asp718I GGTACC 1 cut(s) 968
AspLEI GCGC 5 cut(s) 308, 1243, 1396, 1446, 1472
AsuC2I CCSGG 2 cut(s) 428, 1282
AsuHPI GGTGA 5 cut(s) 12, 109, 228, 779, 955
AsuII TTCGAA 2 cut(s) 510, 787
AvaI CYCGRG 1 cut(s) 443
BaeGI GKGCMC 1 cut(s) 535
BaeI ACNNNNGTAYC 4 cut(s) 591, 591, 624, 624
BalI TGGCCA 1 cut(s) 1531
BanI GGYRCC 3 cut(s) 968, 1240, 1393
BanII GRGCYC 1 cut(s) 1481
BbsI GAAGAC 2 cut(s) 234, 1551
Bbv12I GWGCWC 2 cut(s) 1337, 1481
BbvI GCAGC 9 cut(s) 341, 361, 426, 429, 820, 979, 1380, 1632, 1635
BccI CCATC 6 cut(s) 74, 104, 850, 901, 1582, 1595
BceAI ACGGC 3 cut(s) 1042, 1300, 1396
BcgI CGANNNNNNTGC 2 cut(s) 974, 1008
BciVI GTATCC 1 cut(s) 592
BcnI CCSGG 2 cut(s) 428, 1282
BcoDI GTCTC 2 cut(s) 30, 1162
BcuI ACTAGT 1 cut(s) 1226
BfaI CTAG 3 cut(s) 1227, 1650, 1689
BfoI RGCGCY 2 cut(s) 1244, 1397
BfuI GTATCC 1 cut(s) 592
BglI GCCNNNNNGGC 2 cut(s) 15, 826
BmcAI AGTACT 1 cut(s) 569
Bme1390I CCNGG 2 cut(s) 428, 1282
BmeRI GACNNNNNGTC 1 cut(s) 1552
BmeT110I CYCGRG 1 cut(s) 443
BmgBI CACGTC 1 cut(s) 677
BmiI GGNNCC 4 cut(s) 867, 970, 1242, 1395
BmrFI CCNGG 2 cut(s) 428, 1282
BmsI GCATC 3 cut(s) 242, 1513, 1737
BpiI GAAGAC 2 cut(s) 234, 1551
BplI GAGNNNNNCTC 2 cut(s) 554, 586
BpmI CTGGAG 1 cut(s) 1285
Bpu14I TTCGAA 2 cut(s) 510, 787
BpuEI CTTGAG 1 cut(s) 1733
BpuMI CCSGG 2 cut(s) 428, 1282
BsaAI YACGTR 1 cut(s) 1535
BsaHI GRCGYC 4 cut(s) 380, 803, 1241, 1394
BsaI GGTCTC 1 cut(s) 1162
BsaJI CCNNGG 4 cut(s) 13, 243, 561, 824
BsaWI WCCGGW 4 cut(s) 469, 592, 965, 1387
BsaXI ACNNNNNCTCC 2 cut(s) 85, 115
Bsc4I CCNNNNNNNGG 3 cut(s) 389, 562, 731
Bse118I RCCGGY 3 cut(s) 399, 965, 1195
Bse1I ACTGG 1 cut(s) 1302
Bse3DI GCAATG 3 cut(s) 359, 1199, 1683
BseAI TCCGGA 1 cut(s) 469
BseDI CCNNGG 4 cut(s) 13, 243, 561, 824
BseGI GGATG 5 cut(s) 54, 81, 96, 622, 787
BseLI CCNNNNNNNGG 3 cut(s) 389, 562, 731
BseMI GCAATG 3 cut(s) 359, 1199, 1683
BseMII CTCAG 4 cut(s) 425, 468, 585, 1685
BseNI ACTGG 1 cut(s) 1302
BseRI GAGGAG 9 cut(s) 119, 388, 421, 424, 578, 804, 1038, 1059, 1395
BseSI GKGCMC 1 cut(s) 535
BseXI GCAGC 9 cut(s) 341, 361, 426, 429, 820, 979, 1380, 1632, 1635
BseYI CCCAGC 1 cut(s) 332
Bsh1236I CGCG 3 cut(s) 308, 1446, 1472
Bsh1285I CGRYCG 1 cut(s) 863
BshFI GGCC 4 cut(s) 399, 829, 1308, 1531
BshNI GGYRCC 3 cut(s) 968, 1240, 1393
BshTI ACCGGT 1 cut(s) 965
BsiEI CGRYCG 1 cut(s) 863
BsiHKAI GWGCWC 2 cut(s) 1337, 1481
BsiHKCI CYCGRG 1 cut(s) 443
BslFI GGGAC 1 cut(s) 176
BslI CCNNNNNNNGG 3 cut(s) 389, 562, 731
BsmAI GTCTC 2 cut(s) 30, 1162
BsmBI CGTCTC 1 cut(s) 30
BsmFI GGGAC 1 cut(s) 176
BsmI GAATGC 1 cut(s) 255
BsnI GGCC 4 cut(s) 399, 829, 1308, 1531
Bso31I GGTCTC 1 cut(s) 1162
BsoBI CYCGRG 1 cut(s) 443
Bsp119I TTCGAA 2 cut(s) 510, 787
Bsp1286I GDGCHC 3 cut(s) 535, 1337, 1481
Bsp13I TCCGGA 1 cut(s) 469
Bsp143I GATC 9 cut(s) 250, 430, 472, 557, 721, 1289, 1426, 1490, 1631
Bsp19I CCATGG 1 cut(s) 13
BspANI GGCC 4 cut(s) 399, 829, 1308, 1531
BspCNI CTCAG 4 cut(s) 426, 467, 584, 1686
BspEI TCCGGA 1 cut(s) 469
BspFNI CGCG 3 cut(s) 308, 1446, 1472
BspLI GGNNCC 4 cut(s) 867, 970, 1242, 1395
BspPI GGATC 7 cut(s) 438, 480, 552, 716, 1434, 1498, 1626
BspT104I TTCGAA 2 cut(s) 510, 787
BspT107I GGYRCC 3 cut(s) 968, 1240, 1393
BspTNI GGTCTC 1 cut(s) 1162
BsrDI GCAATG 3 cut(s) 359, 1199, 1683
BsrFI RCCGGY 3 cut(s) 399, 965, 1195
BsrI ACTGG 1 cut(s) 1302
BssAI RCCGGY 3 cut(s) 399, 965, 1195
BssECI CCNNGG 4 cut(s) 13, 243, 561, 824
BssMI GATC 9 cut(s) 250, 430, 472, 557, 721, 1289, 1426, 1490, 1631
BssNI GRCGYC 4 cut(s) 380, 803, 1241, 1394
BssT1I CCWWGG 2 cut(s) 13, 824
Bst4CI ACNGT 4 cut(s) 24, 45, 709, 1595
Bst6I CTCTTC 5 cut(s) 65, 92, 622, 756, 875
BstACI GRCGYC 4 cut(s) 380, 803, 1241, 1394
BstBAI YACGTR 1 cut(s) 1535
BstBI TTCGAA 2 cut(s) 510, 787
BstC8I GCNNGC 4 cut(s) 831, 1197, 1239, 1313
BstDEI CTNAG 6 cut(s) 434, 454, 571, 1140, 1326, 1694
BstDSI CCRYGG 1 cut(s) 13
BstEII GGTNACC 1 cut(s) 961
BstF5I GGATG 5 cut(s) 54, 81, 96, 622, 787
BstFNI CGCG 3 cut(s) 308, 1446, 1472
BstH2I RGCGCY 2 cut(s) 1244, 1397
BstHHI GCGC 5 cut(s) 308, 1243, 1396, 1446, 1472
BstKTI GATC 9 cut(s) 253, 433, 475, 560, 724, 1292, 1429, 1493, 1634
BstMAI GTCTC 2 cut(s) 30, 1162
BstMBI GATC 9 cut(s) 250, 430, 472, 557, 721, 1289, 1426, 1490, 1631
BstMCI CGRYCG 1 cut(s) 863
BstPI GGTNACC 1 cut(s) 961
BstSCI CCNGG 2 cut(s) 426, 1280
BstSLI GKGCMC 1 cut(s) 535
BstUI CGCG 3 cut(s) 308, 1446, 1472
BstV1I GCAGC 9 cut(s) 341, 361, 426, 429, 820, 979, 1380, 1632, 1635
BstV2I GAAGAC 2 cut(s) 234, 1551
BstX2I RGATCY 5 cut(s) 430, 721, 1426, 1490, 1631
BstYI RGATCY 5 cut(s) 430, 721, 1426, 1490, 1631
BsuI GTATCC 1 cut(s) 592
BsuRI GGCC 4 cut(s) 399, 829, 1308, 1531
BtgI CCRYGG 1 cut(s) 13
BtgZI GCGATG 2 cut(s) 828, 920
BtrI CACGTC 1 cut(s) 677
BtsCI GGATG 5 cut(s) 54, 81, 96, 622, 787
BtsIMutI CAGTG 3 cut(s) 462, 1309, 1600
Cac8I GCNNGC 4 cut(s) 831, 1197, 1239, 1313
CfoI GCGC 5 cut(s) 308, 1243, 1396, 1446, 1472
Cfr10I RCCGGY 3 cut(s) 399, 965, 1195
CseI GACGC 3 cut(s) 239, 388, 811
Csp6I GTAC 6 cut(s) 341, 568, 608, 969, 1345, 1568
CspAI ACCGGT 1 cut(s) 965
CspCI CAANNNNNGTGG 2 cut(s) 264, 299
CviAII CATG 1 cut(s) 14
CviQI GTAC 6 cut(s) 341, 568, 608, 969, 1345, 1568
DdeI CTNAG 6 cut(s) 434, 454, 571, 1140, 1326, 1694
DinI GGCGCC 2 cut(s) 1242, 1395
DpnI GATC 9 cut(s) 252, 432, 474, 559, 723, 1291, 1428, 1492, 1633
DpnII GATC 9 cut(s) 250, 430, 472, 557, 721, 1289, 1426, 1490, 1631
DraIII CACNNNGTG 1 cut(s) 1487
DriI GACNNNNNGTC 1 cut(s) 1552
EaeI YGGCCR 3 cut(s) 397, 1306, 1529
Eam1104I CTCTTC 5 cut(s) 65, 92, 622, 756, 875
Eam1105I GACNNNNNGTC 1 cut(s) 1552
EarI CTCTTC 5 cut(s) 65, 92, 622, 756, 875
EciI GGCGGA 5 cut(s) 122, 807, 1242, 1285, 1398
Ecl136II GAGCTC 1 cut(s) 1479
Eco130I CCWWGG 2 cut(s) 13, 824
Eco147I AGGCCT 1 cut(s) 829
Eco24I GRGCYC 1 cut(s) 1481
Eco31I GGTCTC 1 cut(s) 1162
Eco53kI GAGCTC 1 cut(s) 1479
Eco57I CTGAAG 2 cut(s) 780, 1451
Eco88I CYCGRG 1 cut(s) 443
Eco91I GGTNACC 1 cut(s) 961
EcoICRI GAGCTC 1 cut(s) 1479
EcoO65I GGTNACC 1 cut(s) 961
EcoT14I CCWWGG 2 cut(s) 13, 824
EcoT38I GRGCYC 1 cut(s) 1481
EgeI GGCGCC 2 cut(s) 1242, 1395
EheI GGCGCC 2 cut(s) 1242, 1395
ErhI CCWWGG 2 cut(s) 13, 824
Esp3I CGTCTC 1 cut(s) 30
FaeI CATG 1 cut(s) 17
FaiI YATR 6 cut(s) 15, 93, 202, 314, 753, 1110
FaqI GGGAC 1 cut(s) 176
FatI CATG 1 cut(s) 13
FauI CCCGC 6 cut(s) 636, 846, 1092, 1242, 1320, 1439
FokI GGATG 5 cut(s) 41, 68, 83, 609, 794
FriOI GRGCYC 1 cut(s) 1481
FspBI CTAG 3 cut(s) 1227, 1650, 1689
GlaI GCGC 5 cut(s) 307, 1242, 1395, 1445, 1471
GsaI CCCAGC 1 cut(s) 336
GsuI CTGGAG 1 cut(s) 1285
HaeII RGCGCY 2 cut(s) 1244, 1397
HaeIII GGCC 4 cut(s) 399, 829, 1308, 1531
HgaI GACGC 3 cut(s) 239, 388, 811
HhaI GCGC 5 cut(s) 308, 1243, 1396, 1446, 1472
Hin1I GRCGYC 4 cut(s) 380, 803, 1241, 1394
Hin1II CATG 1 cut(s) 17
Hin6I GCGC 5 cut(s) 306, 1241, 1394, 1444, 1470
HinP1I GCGC 5 cut(s) 306, 1241, 1394, 1444, 1470
HincII GTYRAC 3 cut(s) 540, 680, 1582
HindII GTYRAC 3 cut(s) 540, 680, 1582
HindIII AAGCTT 1 cut(s) 1709
HinfI GANTC 6 cut(s) 164, 320, 452, 589, 856, 1375
HphI GGTGA 5 cut(s) 12, 109, 228, 779, 955
Hpy166II GTNNAC 6 cut(s) 41, 540, 680, 1150, 1360, 1582
Hpy188III TCNNGA 5 cut(s) 151, 260, 470, 1159, 1496
Hpy8I GTNNAC 6 cut(s) 41, 540, 680, 1150, 1360, 1582
Hpy99I CGWCG 4 cut(s) 506, 805, 1063, 1290
HpyAV CCTTC 3 cut(s) 687, 889, 1022
HpyCH4III ACNGT 4 cut(s) 24, 45, 709, 1595
HpyCH4IV ACGT 8 cut(s) 676, 698, 715, 1356, 1509, 1518, 1534, 1584
HpyF3I CTNAG 6 cut(s) 434, 454, 571, 1140, 1326, 1694
HpySE526I ACGT 8 cut(s) 676, 698, 715, 1356, 1509, 1518, 1534, 1584
Hsp92I GRCGYC 4 cut(s) 380, 803, 1241, 1394
Hsp92II CATG 1 cut(s) 17
HspAI GCGC 5 cut(s) 306, 1241, 1394, 1444, 1470
KasI GGCGCC 2 cut(s) 1240, 1393
Kpn2I TCCGGA 1 cut(s) 469
KpnI GGTACC 1 cut(s) 972
KroI GCCGGC 1 cut(s) 1195
KroNI GCCGGC 1 cut(s) 1197
Kzo9I GATC 9 cut(s) 250, 430, 472, 557, 721, 1289, 1426, 1490, 1631
LmnI GCTCC 4 cut(s) 411, 425, 865, 1467
Lsp1109I GCAGC 9 cut(s) 341, 361, 426, 429, 820, 979, 1380, 1632, 1635
LweI GCATC 3 cut(s) 242, 1513, 1737
MaeI CTAG 3 cut(s) 1227, 1650, 1689
MaeII ACGT 8 cut(s) 676, 698, 715, 1356, 1509, 1518, 1534, 1584
MaeIII GTNAC 2 cut(s) 292, 961
MalI GATC 9 cut(s) 252, 432, 474, 559, 723, 1291, 1428, 1492, 1633
MboI GATC 9 cut(s) 250, 430, 472, 557, 721, 1289, 1426, 1490, 1631
MflI RGATCY 5 cut(s) 430, 721, 1426, 1490, 1631
MhlI GDGCHC 3 cut(s) 535, 1337, 1481
MlsI TGGCCA 1 cut(s) 1531
MluCI AATT 5 cut(s) 520, 774, 849, 1383, 1499
MluNI TGGCCA 1 cut(s) 1531
Mly113I GGCGCC 2 cut(s) 1241, 1394
MlyI GAGTC 3 cut(s) 158, 446, 1384
MmeI TCCRAC 4 cut(s) 691, 843, 1193, 1199
Mox20I TGGCCA 1 cut(s) 1531
MroI TCCGGA 1 cut(s) 469
MroNI GCCGGC 1 cut(s) 1195
MscI TGGCCA 1 cut(s) 1531
MseI TTAA 5 cut(s) 35, 582, 1382, 1458, 1662
Msp20I TGGCCA 1 cut(s) 1531
MspA1I CMGCKG 4 cut(s) 332, 1237, 1365, 1626
MspR9I CCNGG 2 cut(s) 428, 1282
Mva1269I GAATGC 1 cut(s) 255
MvnI CGCG 3 cut(s) 308, 1446, 1472
NaeI GCCGGC 1 cut(s) 1197
NarI GGCGCC 2 cut(s) 1241, 1394
NciI CCSGG 2 cut(s) 428, 1282
NcoI CCATGG 1 cut(s) 13
NdeII GATC 9 cut(s) 250, 430, 472, 557, 721, 1289, 1426, 1490, 1631
NgoMIV GCCGGC 1 cut(s) 1195
NlaIII CATG 1 cut(s) 17
NlaIV GGNNCC 4 cut(s) 867, 970, 1242, 1395
NmuCI GTSAC 1 cut(s) 961
NspV TTCGAA 2 cut(s) 510, 787
PceI AGGCCT 1 cut(s) 829
PcsI WCGNNNNNNNCGW 5 cut(s) 507, 647, 695, 1353, 1515
PctI GAATGC 1 cut(s) 255
PdiI GCCGGC 1 cut(s) 1197
PfeI GAWTC 3 cut(s) 320, 589, 856
PflFI GACNNNGTC 1 cut(s) 1327
PinAI ACCGGT 1 cut(s) 965
PleI GAGTC 3 cut(s) 158, 446, 1383
PluTI GGCGCC 2 cut(s) 1244, 1397
PpsI GAGTC 3 cut(s) 158, 446, 1383
Ppu21I YACGTR 1 cut(s) 1535
Psp124BI GAGCTC 1 cut(s) 1481
PspEI GGTNACC 1 cut(s) 961
PspFI CCCAGC 1 cut(s) 332
PspN4I GGNNCC 4 cut(s) 867, 970, 1242, 1395
PsuI RGATCY 5 cut(s) 430, 721, 1426, 1490, 1631
PsyI GACNNNGTC 1 cut(s) 1327
PvuII CAGCTG 1 cut(s) 332
RsaI GTAC 6 cut(s) 342, 569, 609, 970, 1346, 1569
RsaNI GTAC 6 cut(s) 341, 568, 608, 969, 1345, 1568
SacI GAGCTC 1 cut(s) 1481
SaqAI TTAA 5 cut(s) 35, 582, 1382, 1458, 1662
Sau3AI GATC 9 cut(s) 250, 430, 472, 557, 721, 1289, 1426, 1490, 1631
ScaI AGTACT 1 cut(s) 569
SchI GAGTC 3 cut(s) 158, 446, 1384
ScrFI CCNGG 2 cut(s) 428, 1282
SduI GDGCHC 3 cut(s) 535, 1337, 1481
SfaNI GCATC 3 cut(s) 242, 1513, 1737
SfoI GGCGCC 2 cut(s) 1242, 1395
SfuI TTCGAA 2 cut(s) 510, 787
SmlI CTYRAG 1 cut(s) 1712
SmoI CTYRAG 1 cut(s) 1712
SpeI ACTAGT 1 cut(s) 1226
Sse9I AATT 5 cut(s) 520, 774, 849, 1383, 1499
SseBI AGGCCT 1 cut(s) 829
SspDI GGCGCC 2 cut(s) 1240, 1393
SspI AATATT 1 cut(s) 271
SspMI CTAG 3 cut(s) 1227, 1650, 1689
SstI GAGCTC 1 cut(s) 1481
StuI AGGCCT 1 cut(s) 829
StyD4I CCNGG 2 cut(s) 426, 1280
StyI CCWWGG 2 cut(s) 13, 824
TaaI ACNGT 4 cut(s) 24, 45, 709, 1595
TaiI ACGT 8 cut(s) 679, 701, 718, 1359, 1512, 1521, 1537, 1587
TaqI TCGA 5 cut(s) 501, 510, 787, 1160, 1331
TaqII GACCGA 2 cut(s) 849, 1144
TasI AATT 5 cut(s) 520, 774, 849, 1383, 1499
TatI WGTACW 3 cut(s) 340, 567, 1567
TfiI GAWTC 3 cut(s) 320, 589, 856
Tru1I TTAA 5 cut(s) 35, 582, 1382, 1458, 1662
Tru9I TTAA 5 cut(s) 35, 582, 1382, 1458, 1662
TscAI CASTG 3 cut(s) 462, 1309, 1600
TseFI GTSAC 1 cut(s) 961
TseI GCWGC 9 cut(s) 329, 349, 414, 417, 833, 992, 1368, 1620, 1623
Tsp45I GTSAC 1 cut(s) 961
TspDTI ATGAA 3 cut(s) 1097, 1672, 1736
TspGWI ACGGA 1 cut(s) 1627
TspRI CASTG 3 cut(s) 462, 1309, 1600
Tth111I GACNNNGTC 1 cut(s) 1327
XspI CTAG 3 cut(s) 1227, 1650, 1689
ZrmI AGTACT 1 cut(s) 569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.