MD02G1136600.v1.1

Belongs to the aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
11404250 .. 11407048
2799 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1136600.v1.1.491

Sequence Viewer

Length: 1464 bp
ATGGAAGCAGTGAGAGAAGTGGAGGAAACTTTGTCTGAGCTCAGGCAAACATTCAAAGGTGGCAGAACCAGAAGCATTGCATGGAGGAAAAAACAACTCAGTTCGCTTCTCAAGCTTGTGAATGACAATGAGGAAAACATTTTCAGAGCACTCGATCAAGATCTTGGCAAGCACCCTGTTGAATCTTATCGGGACGAAATTGGAGTTGTGAAAAAATCAATCAATCATACTTTGAGCAATCTGGAGAAATGGGTTGCTCCTAAAAAGGTGGGATTACCGTTGCCTATGTTCCCGACGTCTGGGTGGCTGCTGCCCGAACCCCTCGGCGTAGTTCTCGTATTTGCATCTTGGAACTTCCCAATATCCTTGGCATTGGACCCTATGATCGGAGCAATAGCTGCAGGGAATGCAGTTGTTCTAAAACCTTCAGAGCAAGCGCCCGCGAGCTCTTCCTTTCTTGCCAACACCATCCCTCAATACATGGACAGTAAAGCGGTTAAAATTGTTGAGGGCGGAGCAGAAATCAGTGAACTCCTCCTGCAGCAGAAGTGGGACAAGATATTCTTTACTGATAAATCTTGCAGAAGTCAGCAGGTCGGGCGTATTGTCATGTCTGCAGCTGCAAAGAATTTGACACCGGTTGCTCTGGAGCTGGGTGGAAAATGCCCGATTATCCTAGATTCCATCTCAAGTCCTTCAGATTTAAAGGTGGCAATCCAAAGAATTGTAGGAGGGAAATGGGGACCTTGCAATGGACAGGCATGTATCGGAGTTGATTATATGCTCGTTGAGGAAAAGTTTGCTCCCACTGTGATTGAATCGCTGAAGAAAACAATCAAGAGGTTTTATAGTGAAAGCCCAAAAGATTCAAAATGCTTAGCCAGAGTCGTAAATAAGCGCCACTTTGAGAGGCTGCGCAATCTCTTCAAAGACCCTCCCGTTGCAGCTTCCATTGTACATGGTGGTTCACTTGATGAAGAAAACCTGTTCATGGAGCCAACAATCTTGCTAGATCCTCCACTCAATGCTGCAATCATGACCGAAGAAATCTTTGGCCCACTGCTTCCAATTATCACTGTGAAAAAGATTGAAGAAAGCATAGAGTTCATAAACTCAAGGCCGAAACCTCTAGCCATCTATGCCTTCACTAAAGATGCAAACTTCAGGAGAAGGGTTTTGTCCGAGACATCCTCAGGAACCGTGGTTTTCAATGACATCTTGATTCAATTTGTCTGTGAAGCTCTACCGTTTGGTGGTGTTGGTCAGAGTGGCTTTGGGAGGTACCATGGAAAGTATTCTTTCGATACTTTCAGCCATGAGAAAGCAGTTGTGCAAGCAAACTTCTTCATTGAATTTGGGTCTAGATATCCTCCATGGAATGACTTCAAAAACAATATCATCAGATCCGCCTACAATCTCGATGACCTCAATTTAGTTTTGCTCCTGCTGGGACTGAAGAGGTAG

Protein Analysis

488

Amino Acids

54.18

Weight (kDa)

8.68

Isoelectric Point (pI)

52.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 5 - 443 7.8e-78 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 299
Acc16I TGCGCA 1 cut(s) 917
Acc36I ACCTGC 1 cut(s) 583
Acc65I GGTACC 1 cut(s) 1281
AccB1I GGYRCC 1 cut(s) 1281
AccII CGCG 1 cut(s) 443
AciI CCGC 4 cut(s) 441, 494, 513, 1407
AclWI GGATC 2 cut(s) 1007, 1398
AcsI RAATTY 2 cut(s) 628, 1352
AcuI CTGAAG 4 cut(s) 411, 681, 845, 1147
AcyI GRCGYC 1 cut(s) 296
AfaI GTAC 2 cut(s) 957, 1283
AfiI CCNNNNNNNGG 5 cut(s) 299, 386, 752, 991, 1253
AgeI ACCGGT 1 cut(s) 637
AjuI GAANNNNNNNTTGG 2 cut(s) 1035, 1067
AluBI AGCT 8 cut(s) 40, 115, 398, 447, 620, 652, 947, 1241
AluI AGCT 8 cut(s) 40, 115, 398, 447, 620, 652, 947, 1241
Alw21I GWGCWC 3 cut(s) 42, 151, 449
Alw26I GTCTC 1 cut(s) 1178
AlwI GGATC 2 cut(s) 1007, 1398
AoxI GGCC 2 cut(s) 1054, 1118
ApeKI GCWGC 9 cut(s) 307, 310, 398, 541, 617, 620, 913, 944, 1028
ApoI RAATTY 2 cut(s) 628, 1352
AsiGI ACCGGT 1 cut(s) 637
Asp700I GAANNNNTTC 2 cut(s) 1294, 1382
Asp718I GGTACC 1 cut(s) 1281
AspLEI GCGC 3 cut(s) 439, 900, 918
AspS9I GGNCC 3 cut(s) 376, 743, 1055
AvaII GGWCC 2 cut(s) 376, 743
AxyI CCTNAGG 1 cut(s) 1192
BanI GGYRCC 1 cut(s) 1281
BanII GRGCYC 2 cut(s) 42, 449
Bbv12I GWGCWC 3 cut(s) 42, 151, 449
BbvI GCAGC 9 cut(s) 294, 297, 385, 553, 607, 629, 900, 956, 1015
BccI CCATC 3 cut(s) 476, 692, 1142
BcoDI GTCTC 1 cut(s) 1178
BfaI CTAG 4 cut(s) 677, 1010, 1130, 1362
BfmI CTRYAG 3 cut(s) 399, 539, 615
BfoI RGCGCY 2 cut(s) 440, 901
BfuAI ACCTGC 1 cut(s) 583
BglII AGATCT 1 cut(s) 160
BisI GCNGC 9 cut(s) 308, 311, 399, 542, 618, 621, 914, 945, 1029
BlpI GCTNAGC 1 cut(s) 877
BlsI GCNGC 9 cut(s) 309, 312, 400, 543, 619, 622, 915, 946, 1030
Bme18I GGWCC 2 cut(s) 376, 743
BmgT120I GGNCC 3 cut(s) 376, 743, 1055
BmiI GGNNCC 5 cut(s) 378, 744, 996, 1198, 1283
BmsI GCATC 2 cut(s) 353, 1144
BplI GAGNNNNNCTC 2 cut(s) 1175, 1207
BpmI CTGGAG 2 cut(s) 263, 668
Bpu10I CCTNAGC 1 cut(s) 41
Bpu1102I GCTNAGC 1 cut(s) 877
BpuEI CTTGAG 3 cut(s) 95, 673, 1099
BsaBI GATNNNNATC 1 cut(s) 159
BsaHI GRCGYC 1 cut(s) 296
BsaJI CCNNGG 5 cut(s) 322, 366, 1200, 1285, 1373
BsaWI WCCGGW 1 cut(s) 637
Bsc4I CCNNNNNNNGG 5 cut(s) 299, 386, 752, 991, 1253
Bse118I RCCGGY 1 cut(s) 637
Bse21I CCTNAGG 1 cut(s) 1192
Bse3DI GCAATG 2 cut(s) 75, 757
Bse8I GATNNNNATC 1 cut(s) 159
BseDI CCNNGG 5 cut(s) 322, 366, 1200, 1285, 1373
BseGI GGATG 2 cut(s) 468, 1187
BseJI GATNNNNATC 1 cut(s) 159
BseLI CCNNNNNNNGG 5 cut(s) 299, 386, 752, 991, 1253
BseMI GCAATG 2 cut(s) 75, 757
BseMII CTCAG 4 cut(s) 27, 55, 112, 1206
BseRI GAGGAG 1 cut(s) 524
BseXI GCAGC 9 cut(s) 294, 297, 385, 553, 607, 629, 900, 956, 1015
BseYI CCCAGC 2 cut(s) 652, 1447
Bsh1236I CGCG 1 cut(s) 443
BshFI GGCC 2 cut(s) 1056, 1120
BshNI GGYRCC 1 cut(s) 1281
BshTI ACCGGT 1 cut(s) 637
BsiHKAI GWGCWC 3 cut(s) 42, 151, 449
BsiSI CCGG 1 cut(s) 638
BslFI GGGAC 3 cut(s) 206, 566, 756
BslI CCNNNNNNNGG 5 cut(s) 299, 386, 752, 991, 1253
BsmAI GTCTC 1 cut(s) 1178
BsmFI GGGAC 3 cut(s) 206, 566, 756
BsmI GAATGC 1 cut(s) 412
BsnI GGCC 2 cut(s) 1056, 1120
Bsp1286I GDGCHC 3 cut(s) 42, 151, 449
Bsp1407I TGTACA 1 cut(s) 955
Bsp143I GATC 5 cut(s) 154, 160, 384, 1012, 1403
Bsp1720I GCTNAGC 1 cut(s) 877
Bsp19I CCATGG 2 cut(s) 1285, 1373
BspACI CCGC 4 cut(s) 441, 494, 513, 1407
BspANI GGCC 2 cut(s) 1056, 1120
BspCNI CTCAG 4 cut(s) 28, 54, 111, 1205
BspFNI CGCG 1 cut(s) 443
BspHI TCATGA 1 cut(s) 1035
BspLI GGNNCC 5 cut(s) 378, 744, 996, 1198, 1283
BspMAI CTGCAG 3 cut(s) 403, 543, 619
BspMI ACCTGC 1 cut(s) 583
BspPI GGATC 2 cut(s) 1007, 1398
BspQI GCTCTTC 1 cut(s) 454
BspT107I GGYRCC 1 cut(s) 1281
BsrDI GCAATG 2 cut(s) 75, 757
BsrFI RCCGGY 1 cut(s) 637
BsrGI TGTACA 1 cut(s) 955
BssAI RCCGGY 1 cut(s) 637
BssECI CCNNGG 5 cut(s) 322, 366, 1200, 1285, 1373
BssMI GATC 5 cut(s) 154, 160, 384, 1012, 1403
BssNI GRCGYC 1 cut(s) 296
BssT1I CCWWGG 3 cut(s) 366, 1285, 1373
Bst4CI ACNGT 6 cut(s) 279, 488, 811, 1078, 1201, 1248
Bst6I CTCTTC 3 cut(s) 454, 929, 1451
BstACI GRCGYC 1 cut(s) 296
BstAPI GCANNNNNTGC 2 cut(s) 398, 407
BstAUI TGTACA 1 cut(s) 955
BstC8I GCNNGC 5 cut(s) 170, 435, 441, 445, 1335
BstDEI CTNAG 5 cut(s) 36, 41, 98, 877, 1192
BstDSI CCRYGG 3 cut(s) 1200, 1285, 1373
BstF5I GGATG 2 cut(s) 468, 1187
BstFNI CGCG 1 cut(s) 443
BstH2I RGCGCY 2 cut(s) 440, 901
BstHHI GCGC 3 cut(s) 439, 900, 918
BstKTI GATC 5 cut(s) 157, 163, 387, 1015, 1406
BstMAI GTCTC 1 cut(s) 1178
BstMBI GATC 5 cut(s) 154, 160, 384, 1012, 1403
BstMWI GCNNNNNNNGC 5 cut(s) 112, 398, 407, 598, 1139
BstNSI RCATGY 1 cut(s) 765
BstSFI CTRYAG 3 cut(s) 399, 539, 615
BstUI CGCG 1 cut(s) 443
BstV1I GCAGC 9 cut(s) 294, 297, 385, 553, 607, 629, 900, 956, 1015
BstX2I RGATCY 3 cut(s) 160, 1012, 1403
BstYI RGATCY 3 cut(s) 160, 1012, 1403
Bsu36I CCTNAGG 1 cut(s) 1192
BsuRI GGCC 2 cut(s) 1056, 1120
BtgI CCRYGG 3 cut(s) 1200, 1285, 1373
BtsCI GGATG 2 cut(s) 468, 1187
BtsI GCAGTG 2 cut(s) 15, 1058
BtsIMutI CAGTG 5 cut(s) 15, 532, 807, 1058, 1074
BveI ACCTGC 1 cut(s) 583
Cac8I GCNNGC 5 cut(s) 170, 435, 441, 445, 1335
CciI TCATGA 1 cut(s) 1035
CfoI GCGC 3 cut(s) 439, 900, 918
Cfr10I RCCGGY 1 cut(s) 637
Cfr13I GGNCC 3 cut(s) 376, 743, 1055
Csp6I GTAC 2 cut(s) 956, 1282
CspAI ACCGGT 1 cut(s) 637
CspCI CAANNNNNGTGG 2 cut(s) 796, 831
CviQI GTAC 2 cut(s) 956, 1282
DdeI CTNAG 5 cut(s) 36, 41, 98, 877, 1192
DpnI GATC 5 cut(s) 156, 162, 386, 1014, 1405
DpnII GATC 5 cut(s) 154, 160, 384, 1012, 1403
DraI TTTAAA 1 cut(s) 705
Eam1104I CTCTTC 3 cut(s) 454, 929, 1451
EarI CTCTTC 3 cut(s) 454, 929, 1451
EciI GGCGGA 2 cut(s) 528, 1396
Ecl136II GAGCTC 2 cut(s) 40, 447
Eco130I CCWWGG 3 cut(s) 366, 1285, 1373
Eco24I GRGCYC 2 cut(s) 42, 449
Eco32I GATATC 1 cut(s) 1367
Eco47I GGWCC 2 cut(s) 376, 743
Eco53kI GAGCTC 2 cut(s) 40, 447
Eco57I CTGAAG 4 cut(s) 411, 681, 845, 1147
Eco81I CCTNAGG 1 cut(s) 1192
EcoICRI GAGCTC 2 cut(s) 40, 447
EcoO109I RGGNCCY 1 cut(s) 743
EcoRV GATATC 1 cut(s) 1367
EcoT14I CCWWGG 3 cut(s) 366, 1285, 1373
EcoT38I GRGCYC 2 cut(s) 42, 449
ErhI CCWWGG 3 cut(s) 366, 1285, 1373
FalI AAGNNNNNCTT 4 cut(s) 548, 580, 887, 919
FaqI GGGAC 3 cut(s) 206, 566, 756
FauI CCCGC 1 cut(s) 448
Fnu4HI GCNGC 9 cut(s) 308, 311, 399, 542, 618, 621, 914, 945, 1029
FokI GGATG 2 cut(s) 455, 1174
FriOI GRGCYC 2 cut(s) 42, 449
Fsp4HI GCNGC 9 cut(s) 308, 311, 399, 542, 618, 621, 914, 945, 1029
FspBI CTAG 4 cut(s) 677, 1010, 1130, 1362
FspI TGCGCA 1 cut(s) 917
GlaI GCGC 3 cut(s) 438, 899, 917
GluI GCNGC 9 cut(s) 308, 311, 399, 542, 618, 621, 914, 945, 1029
GsaI CCCAGC 2 cut(s) 656, 1451
GsuI CTGGAG 2 cut(s) 263, 668
HaeII RGCGCY 2 cut(s) 440, 901
HaeIII GGCC 2 cut(s) 1056, 1120
HapII CCGG 1 cut(s) 638
HhaI GCGC 3 cut(s) 439, 900, 918
Hin1I GRCGYC 1 cut(s) 296
Hin6I GCGC 3 cut(s) 437, 898, 916
HinP1I GCGC 3 cut(s) 437, 898, 916
HindIII AAGCTT 1 cut(s) 113
HinfI GANTC 6 cut(s) 182, 680, 818, 866, 885, 1222
HpaII CCGG 1 cut(s) 638
Hpy166II GTNNAC 2 cut(s) 530, 968
Hpy188I TCNGA 9 cut(s) 37, 146, 389, 430, 700, 770, 1183, 1266, 1403
Hpy8I GTNNAC 2 cut(s) 530, 968
Hpy99I CGWCG 1 cut(s) 298
HpyAV CCTTC 4 cut(s) 435, 705, 1153, 1164
HpyCH4III ACNGT 6 cut(s) 279, 488, 811, 1078, 1201, 1248
HpyCH4IV ACGT 1 cut(s) 296
HpyF10VI GCNNNNNNNGC 5 cut(s) 112, 398, 407, 598, 1139
HpyF3I CTNAG 5 cut(s) 36, 41, 98, 877, 1192
HpySE526I ACGT 1 cut(s) 296
Hsp92I GRCGYC 1 cut(s) 296
HspAI GCGC 3 cut(s) 437, 898, 916
KpnI GGTACC 1 cut(s) 1285
Kzo9I GATC 5 cut(s) 154, 160, 384, 1012, 1403
LguI GCTCTTC 1 cut(s) 454
LmnI GCTCC 7 cut(s) 262, 389, 515, 649, 808, 994, 1446
Lsp1109I GCAGC 9 cut(s) 294, 297, 385, 553, 607, 629, 900, 956, 1015
LweI GCATC 2 cut(s) 353, 1144
MaeI CTAG 4 cut(s) 677, 1010, 1130, 1362
MaeII ACGT 1 cut(s) 296
MalI GATC 5 cut(s) 156, 162, 386, 1014, 1405
MboI GATC 5 cut(s) 154, 160, 384, 1012, 1403
MboII GAAGA 7 cut(s) 441, 838, 916, 989, 1055, 1103, 1336
MflI RGATCY 3 cut(s) 160, 1012, 1403
MhlI GDGCHC 3 cut(s) 42, 151, 449
MluCI AATT 8 cut(s) 198, 501, 628, 723, 1068, 1226, 1352, 1429
MlyI GAGTC 1 cut(s) 894
MroXI GAANNNNTTC 2 cut(s) 1294, 1382
MseI TTAA 2 cut(s) 498, 704
MspA1I CMGCKG 1 cut(s) 620
MspI CCGG 1 cut(s) 638
Mva1269I GAATGC 1 cut(s) 412
MvnI CGCG 1 cut(s) 443
MwoI GCNNNNNNNGC 5 cut(s) 112, 398, 407, 598, 1139
NcoI CCATGG 2 cut(s) 1285, 1373
NdeII GATC 5 cut(s) 154, 160, 384, 1012, 1403
NlaIV GGNNCC 5 cut(s) 378, 744, 996, 1198, 1283
NmeAIII GCCGAG 1 cut(s) 303
NsbI TGCGCA 1 cut(s) 917
NspI RCATGY 1 cut(s) 765
PagI TCATGA 1 cut(s) 1035
PciSI GCTCTTC 1 cut(s) 454
PctI GAATGC 1 cut(s) 412
PdmI GAANNNNTTC 2 cut(s) 1294, 1382
PfeI GAWTC 5 cut(s) 182, 680, 818, 866, 1222
PinAI ACCGGT 1 cut(s) 637
PkrI GCNGC 9 cut(s) 309, 312, 400, 543, 619, 622, 915, 946, 1030
PleI GAGTC 1 cut(s) 893
PpsI GAGTC 1 cut(s) 893
PpuMI RGGWCCY 1 cut(s) 743
Psp124BI GAGCTC 2 cut(s) 42, 449
Psp5II RGGWCCY 1 cut(s) 743
PspFI CCCAGC 2 cut(s) 652, 1447
PspN4I GGNNCC 5 cut(s) 378, 744, 996, 1198, 1283
PspPI GGNCC 3 cut(s) 376, 743, 1055
PspPPI RGGWCCY 1 cut(s) 743
PstI CTGCAG 3 cut(s) 403, 543, 619
PsuI RGATCY 3 cut(s) 160, 1012, 1403
PvuII CAGCTG 1 cut(s) 620
RsaI GTAC 2 cut(s) 957, 1283
RsaNI GTAC 2 cut(s) 956, 1282
SacI GAGCTC 2 cut(s) 42, 449
SapI GCTCTTC 1 cut(s) 454
SaqAI TTAA 2 cut(s) 498, 704
SatI GCNGC 9 cut(s) 308, 311, 399, 542, 618, 621, 914, 945, 1029
Sau3AI GATC 5 cut(s) 154, 160, 384, 1012, 1403
Sau96I GGNCC 3 cut(s) 376, 743, 1055
SchI GAGTC 1 cut(s) 894
SduI GDGCHC 3 cut(s) 42, 151, 449
SfaNI GCATC 2 cut(s) 353, 1144
SfcI CTRYAG 3 cut(s) 399, 539, 615
SinI GGWCC 2 cut(s) 376, 743
SmlI CTYRAG 3 cut(s) 110, 688, 1114
SmoI CTYRAG 3 cut(s) 110, 688, 1114
Sse9I AATT 8 cut(s) 198, 501, 628, 723, 1068, 1226, 1352, 1429
SsiI CCGC 4 cut(s) 441, 494, 513, 1407
SspMI CTAG 4 cut(s) 677, 1010, 1130, 1362
SstI GAGCTC 2 cut(s) 42, 449
StyI CCWWGG 3 cut(s) 366, 1285, 1373
TaaI ACNGT 6 cut(s) 279, 488, 811, 1078, 1201, 1248
TaiI ACGT 1 cut(s) 299
TaqI TCGA 3 cut(s) 153, 1302, 1419
TaqII GACCGA 1 cut(s) 1055
TasI AATT 8 cut(s) 198, 501, 628, 723, 1068, 1226, 1352, 1429
TatI WGTACW 1 cut(s) 955
TfiI GAWTC 5 cut(s) 182, 680, 818, 866, 1222
Tru1I TTAA 2 cut(s) 498, 704
Tru9I TTAA 2 cut(s) 498, 704
TscAI CASTG 5 cut(s) 15, 532, 814, 1065, 1081
TseI GCWGC 9 cut(s) 307, 310, 398, 541, 617, 620, 913, 944, 1028
TspDTI ATGAA 4 cut(s) 979, 990, 1096, 1336
TspRI CASTG 5 cut(s) 15, 532, 814, 1065, 1081
VpaK11BI GGWCC 2 cut(s) 376, 743
XapI RAATTY 2 cut(s) 628, 1352
XbaI TCTAGA 1 cut(s) 1361
XceI RCATGY 1 cut(s) 765
XmnI GAANNNNTTC 2 cut(s) 1294, 1382
XspI CTAG 4 cut(s) 677, 1010, 1130, 1362
ZraI GACGTC 1 cut(s) 297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.