pycom02g10790

Belongs to the aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
7583109 .. 7585688
2580 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g10790.2

Sequence Viewer

Length: 1401 bp
ATGGAAGCAGTGAGAGAAGTGGAGGAAACTTTGTCTGAGCTGAGGCAAACATTCAAAGGTGGCAGAACCAGAAGCATTGCATGGAGGAAAAAACAACTCAGTTCGCTTCTCGAGCTCGTGAATGACAATGAAGAAAACATTTTCAGAGCACTCGATCAAGATCTTGGCAAGCACCCTGTTGAATCTTATCGGGACGAAGTAGCCTTGGCATTGGACCCTATGATCGGAGCAATAGCTGCAGGGAATGCAGTTGTTCTAAAACCTTCAGAGCAAGCGCCCGCGAGCTCTTCCTTTCTTGCCAACACCATCCCTCAATACATGGACAGTAAAGCGGTTAAAATTGCTGAGGGCGGAGCAGAAATCAGTGAACTACTCCTGCAGCAGAAGTGGGACAAGATATTCTTCACTGGTAGTCAGCAGGTCGGGCGTATTGTCATGTCTGCAGCTGCAAAGAATTTGACACCGGTTGCTCTGGAGCTGGGTGGAAAATGCCCGATTATCCTAGATTCCATCTCAAGTCCTTCGGATTTAAAGGTTTTTCGGAGTAACTGCAATTTTAATGGATGTGGAAGAAGTCTTAAACTATACACTTACTCATGTTGCCTTCATCGTGTTGGCCCGCAGGTGGCAATCCAAAGAATTGTAGGAGGGAAATGGGGACCTTGCAATGGACAGGCATGTATCGGAGTTGATTATATGCTCGTTGAGGAAAAGTTTGCTCCCACTGTGATTGAATCGCTGAAGAAAACAATCAAGAGGTTTTATAGTGAAAGCCCAAAAGATTCAAAATGCTTAGCCAGAGTCGTAAATAAGCGCCATTTTGAGAGGCTGCGCAATCTCTTCCAAGACCCTCCCGTTGCAGCTTCCATTGTACATGGTGGTTCACTTGATGAAGAAAACCTGTTCATAGAGCCAACAATCTTGCTAGATCCACCGCTCGATGCTGCAATCATGACCGAAGAAATCTTTGGCCCACTGCTTCCAATTATCACTGTGAAAAAGATTGAAGAAAGCATAGAGTTCATAAATTCAAGGCCGAAACCTCTAGCCATATATGCCTTCACTAAAGATGCAAACTTCAGAAGAAGGGTTTTGTCCGAGACATCCTCAGGAACCGTGGTTTTCAATGACATCTTGATTCAAGTACTGCATCTTTCTATTCGTTTTGTCTGTGAAGCTCTACCGTTTGGTGGTGTTGGTCAGAGTGGCTTTGGGAGGTACCATGGAAAGTATTCTTTCGATACTTTCAGCCATGAGAAAGCGGTTGTGCAAGCAAACTTCTTCATTGAATTTGGGTCTAGATATCCTCCATGGAATGACTTCAAAAACAATATTATCAGATCCGCCTACAATCTCAATTACCTCAATGTAGTTTTGCTCCTACTGGGACTGAAGAGGTAG

Protein Analysis

467

Amino Acids

51.9

Weight (kDa)

8.44

Isoelectric Point (pI)

53.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 613
Acc16I TGCGCA 1 cut(s) 833
Acc36I ACCTGC 2 cut(s) 409, 613
Acc65I GGTACC 1 cut(s) 1218
AccB1I GGYRCC 1 cut(s) 1218
AccBSI CCGCTC 1 cut(s) 937
AccII CGCG 1 cut(s) 281
AciI CCGC 7 cut(s) 279, 332, 351, 620, 935, 1262, 1344
AclWI GGATC 2 cut(s) 923, 1335
AcsI RAATTY 3 cut(s) 454, 1027, 1289
AcuI CTGAAG 3 cut(s) 249, 761, 1063
AfaI GTAC 3 cut(s) 873, 1146, 1220
AfiI CCNNNNNNNGG 4 cut(s) 224, 625, 668, 1190
AgeI ACCGGT 1 cut(s) 463
AjuI GAANNNNNNNTTGG 2 cut(s) 951, 983
AluBI AGCT 8 cut(s) 40, 115, 236, 285, 446, 478, 863, 1178
AluI AGCT 8 cut(s) 40, 115, 236, 285, 446, 478, 863, 1178
Alw21I GWGCWC 3 cut(s) 117, 151, 287
Alw26I GTCTC 1 cut(s) 1094
AlwI GGATC 2 cut(s) 923, 1335
Ama87I CYCGRG 1 cut(s) 110
AoxI GGCC 3 cut(s) 616, 970, 1034
ApeKI GCWGC 7 cut(s) 236, 379, 443, 446, 829, 860, 944
ApoI RAATTY 3 cut(s) 454, 1027, 1289
AsiGI ACCGGT 1 cut(s) 463
Asp700I GAANNNNTTC 2 cut(s) 1231, 1319
Asp718I GGTACC 1 cut(s) 1218
AspLEI GCGC 3 cut(s) 277, 816, 834
AspS9I GGNCC 4 cut(s) 214, 617, 659, 971
AvaI CYCGRG 1 cut(s) 110
AvaII GGWCC 2 cut(s) 214, 659
AxyI CCTNAGG 1 cut(s) 1108
BanI GGYRCC 1 cut(s) 1218
BanII GRGCYC 2 cut(s) 117, 287
BauI CACGAG 1 cut(s) 116
Bbv12I GWGCWC 3 cut(s) 117, 151, 287
BbvCI CCTCAGC 2 cut(s) 41, 345
BbvI GCAGC 7 cut(s) 223, 391, 433, 455, 816, 872, 931
BccI CCATC 2 cut(s) 314, 518
BcoDI GTCTC 1 cut(s) 1094
BfaI CTAG 4 cut(s) 503, 926, 1046, 1299
BfmI CTRYAG 3 cut(s) 237, 377, 441
BfoI RGCGCY 2 cut(s) 278, 817
BfuAI ACCTGC 2 cut(s) 409, 613
BglII AGATCT 1 cut(s) 160
BisI GCNGC 7 cut(s) 237, 380, 444, 447, 830, 861, 945
BlpI GCTNAGC 1 cut(s) 793
BlsI GCNGC 7 cut(s) 238, 381, 445, 448, 831, 862, 946
BmcAI AGTACT 1 cut(s) 1146
Bme18I GGWCC 2 cut(s) 214, 659
BmeT110I CYCGRG 1 cut(s) 110
BmgT120I GGNCC 4 cut(s) 214, 617, 659, 971
BmiI GGNNCC 4 cut(s) 216, 660, 1114, 1220
BmrI ACTGGG 1 cut(s) 1394
BmsI GCATC 3 cut(s) 931, 1060, 1159
BmuI ACTGGG 1 cut(s) 1394
BplI GAGNNNNNCTC 2 cut(s) 1091, 1123
BpmI CTGGAG 1 cut(s) 494
Bpu10I CCTNAGC 2 cut(s) 41, 345
Bpu1102I GCTNAGC 1 cut(s) 793
BpuEI CTTGAG 1 cut(s) 499
BsaBI GATNNNNATC 1 cut(s) 159
BsaJI CCNNGG 4 cut(s) 204, 1116, 1222, 1310
BsaWI WCCGGW 1 cut(s) 463
Bsc4I CCNNNNNNNGG 4 cut(s) 224, 625, 668, 1190
Bse118I RCCGGY 1 cut(s) 463
Bse1I ACTGG 2 cut(s) 412, 1389
Bse21I CCTNAGG 1 cut(s) 1108
Bse3DI GCAATG 2 cut(s) 75, 673
Bse8I GATNNNNATC 1 cut(s) 159
BseDI CCNNGG 4 cut(s) 204, 1116, 1222, 1310
BseGI GGATG 3 cut(s) 306, 569, 1103
BseJI GATNNNNATC 1 cut(s) 159
BseLI CCNNNNNNNGG 4 cut(s) 224, 625, 668, 1190
BseMI GCAATG 2 cut(s) 75, 673
BseMII CTCAG 5 cut(s) 27, 32, 112, 336, 1122
BseNI ACTGG 2 cut(s) 412, 1389
BseXI GCAGC 7 cut(s) 223, 391, 433, 455, 816, 872, 931
BseYI CCCAGC 1 cut(s) 478
Bsh1236I CGCG 1 cut(s) 281
BshFI GGCC 3 cut(s) 618, 972, 1036
BshNI GGYRCC 1 cut(s) 1218
BshTI ACCGGT 1 cut(s) 463
BsiHKAI GWGCWC 3 cut(s) 117, 151, 287
BsiHKCI CYCGRG 1 cut(s) 110
BsiSI CCGG 1 cut(s) 464
BslFI GGGAC 3 cut(s) 206, 404, 672
BslI CCNNNNNNNGG 4 cut(s) 224, 625, 668, 1190
BsmAI GTCTC 1 cut(s) 1094
BsmFI GGGAC 3 cut(s) 206, 404, 672
BsmI GAATGC 1 cut(s) 250
BsnI GGCC 3 cut(s) 618, 972, 1036
BsoBI CYCGRG 1 cut(s) 110
Bsp1286I GDGCHC 3 cut(s) 117, 151, 287
Bsp1407I TGTACA 1 cut(s) 871
Bsp143I GATC 5 cut(s) 154, 160, 222, 928, 1340
Bsp1720I GCTNAGC 1 cut(s) 793
Bsp19I CCATGG 2 cut(s) 1222, 1310
BspACI CCGC 7 cut(s) 279, 332, 351, 620, 935, 1262, 1344
BspANI GGCC 3 cut(s) 618, 972, 1036
BspCNI CTCAG 5 cut(s) 28, 33, 111, 337, 1121
BspFNI CGCG 1 cut(s) 281
BspHI TCATGA 1 cut(s) 951
BspLI GGNNCC 4 cut(s) 216, 660, 1114, 1220
BspMAI CTGCAG 3 cut(s) 241, 381, 445
BspMI ACCTGC 2 cut(s) 409, 613
BspPI GGATC 2 cut(s) 923, 1335
BspQI GCTCTTC 1 cut(s) 292
BspT107I GGYRCC 1 cut(s) 1218
BsrBI CCGCTC 1 cut(s) 937
BsrDI GCAATG 2 cut(s) 75, 673
BsrFI RCCGGY 1 cut(s) 463
BsrGI TGTACA 1 cut(s) 871
BsrI ACTGG 2 cut(s) 412, 1389
BssAI RCCGGY 1 cut(s) 463
BssECI CCNNGG 4 cut(s) 204, 1116, 1222, 1310
BssMI GATC 5 cut(s) 154, 160, 222, 928, 1340
BssSI CACGAG 1 cut(s) 116
BssT1I CCWWGG 3 cut(s) 204, 1222, 1310
Bst2BI CACGAG 1 cut(s) 116
Bst4CI ACNGT 5 cut(s) 326, 727, 994, 1117, 1185
Bst6I CTCTTC 3 cut(s) 292, 845, 1388
BstAPI GCANNNNNTGC 2 cut(s) 236, 245
BstAUI TGTACA 1 cut(s) 871
BstC8I GCNNGC 6 cut(s) 170, 273, 279, 283, 620, 1272
BstDEI CTNAG 6 cut(s) 36, 41, 98, 345, 793, 1108
BstDSI CCRYGG 3 cut(s) 1116, 1222, 1310
BstF5I GGATG 3 cut(s) 306, 569, 1103
BstFNI CGCG 1 cut(s) 281
BstH2I RGCGCY 2 cut(s) 278, 817
BstHHI GCGC 3 cut(s) 277, 816, 834
BstKTI GATC 5 cut(s) 157, 163, 225, 931, 1343
BstMAI GTCTC 1 cut(s) 1094
BstMBI GATC 5 cut(s) 154, 160, 222, 928, 1340
BstMWI GCNNNNNNNGC 5 cut(s) 112, 236, 245, 424, 1055
BstNSI RCATGY 1 cut(s) 681
BstSFI CTRYAG 3 cut(s) 237, 377, 441
BstUI CGCG 1 cut(s) 281
BstV1I GCAGC 7 cut(s) 223, 391, 433, 455, 816, 872, 931
BstX2I RGATCY 3 cut(s) 160, 928, 1340
BstYI RGATCY 3 cut(s) 160, 928, 1340
Bsu36I CCTNAGG 1 cut(s) 1108
BsuRI GGCC 3 cut(s) 618, 972, 1036
BtgI CCRYGG 3 cut(s) 1116, 1222, 1310
BtsCI GGATG 3 cut(s) 306, 569, 1103
BtsI GCAGTG 2 cut(s) 15, 974
BtsIMutI CAGTG 6 cut(s) 15, 370, 405, 723, 974, 990
BveI ACCTGC 2 cut(s) 409, 613
Cac8I GCNNGC 6 cut(s) 170, 273, 279, 283, 620, 1272
CciI TCATGA 1 cut(s) 951
CfoI GCGC 3 cut(s) 277, 816, 834
Cfr10I RCCGGY 1 cut(s) 463
Cfr13I GGNCC 4 cut(s) 214, 617, 659, 971
Csp6I GTAC 3 cut(s) 872, 1145, 1219
CspAI ACCGGT 1 cut(s) 463
CspCI CAANNNNNGTGG 2 cut(s) 712, 747
CviQI GTAC 3 cut(s) 872, 1145, 1219
DdeI CTNAG 6 cut(s) 36, 41, 98, 345, 793, 1108
DpnI GATC 5 cut(s) 156, 162, 224, 930, 1342
DpnII GATC 5 cut(s) 154, 160, 222, 928, 1340
DraI TTTAAA 1 cut(s) 531
Eam1104I CTCTTC 3 cut(s) 292, 845, 1388
EarI CTCTTC 3 cut(s) 292, 845, 1388
EciI GGCGGA 2 cut(s) 366, 1333
Ecl136II GAGCTC 2 cut(s) 115, 285
Eco130I CCWWGG 3 cut(s) 204, 1222, 1310
Eco24I GRGCYC 2 cut(s) 117, 287
Eco32I GATATC 1 cut(s) 1304
Eco47I GGWCC 2 cut(s) 214, 659
Eco53kI GAGCTC 2 cut(s) 115, 285
Eco57I CTGAAG 3 cut(s) 249, 761, 1063
Eco81I CCTNAGG 1 cut(s) 1108
Eco88I CYCGRG 1 cut(s) 110
EcoICRI GAGCTC 2 cut(s) 115, 285
EcoO109I RGGNCCY 1 cut(s) 659
EcoRV GATATC 1 cut(s) 1304
EcoT14I CCWWGG 3 cut(s) 204, 1222, 1310
EcoT38I GRGCYC 2 cut(s) 117, 287
ErhI CCWWGG 3 cut(s) 204, 1222, 1310
FalI AAGNNNNNCTT 2 cut(s) 386, 418
FaqI GGGAC 3 cut(s) 206, 404, 672
FauI CCCGC 2 cut(s) 286, 627
Fnu4HI GCNGC 7 cut(s) 237, 380, 444, 447, 830, 861, 945
FokI GGATG 3 cut(s) 293, 576, 1090
FriOI GRGCYC 2 cut(s) 117, 287
Fsp4HI GCNGC 7 cut(s) 237, 380, 444, 447, 830, 861, 945
FspBI CTAG 4 cut(s) 503, 926, 1046, 1299
FspI TGCGCA 1 cut(s) 833
GlaI GCGC 3 cut(s) 276, 815, 833
GluI GCNGC 7 cut(s) 237, 380, 444, 447, 830, 861, 945
GsaI CCCAGC 1 cut(s) 482
GsuI CTGGAG 1 cut(s) 494
HaeII RGCGCY 2 cut(s) 278, 817
HaeIII GGCC 3 cut(s) 618, 972, 1036
HapII CCGG 1 cut(s) 464
HhaI GCGC 3 cut(s) 277, 816, 834
Hin6I GCGC 3 cut(s) 275, 814, 832
HinP1I GCGC 3 cut(s) 275, 814, 832
HinfI GANTC 6 cut(s) 182, 506, 734, 782, 801, 1138
HpaII CCGG 1 cut(s) 464
Hpy166II GTNNAC 2 cut(s) 368, 884
Hpy8I GTNNAC 2 cut(s) 368, 884
HpyAV CCTTC 5 cut(s) 273, 531, 614, 1069, 1080
HpyCH4III ACNGT 5 cut(s) 326, 727, 994, 1117, 1185
HpyF10VI GCNNNNNNNGC 5 cut(s) 112, 236, 245, 424, 1055
HpyF3I CTNAG 6 cut(s) 36, 41, 98, 345, 793, 1108
HspAI GCGC 3 cut(s) 275, 814, 832
KpnI GGTACC 1 cut(s) 1222
Kzo9I GATC 5 cut(s) 154, 160, 222, 928, 1340
LguI GCTCTTC 1 cut(s) 292
LmnI GCTCC 5 cut(s) 227, 353, 475, 724, 1383
Lsp1109I GCAGC 7 cut(s) 223, 391, 433, 455, 816, 872, 931
LweI GCATC 3 cut(s) 931, 1060, 1159
MaeI CTAG 4 cut(s) 503, 926, 1046, 1299
MaeIII GTNAC 1 cut(s) 545
MalI GATC 5 cut(s) 156, 162, 224, 930, 1342
MbiI CCGCTC 1 cut(s) 937
MboI GATC 5 cut(s) 154, 160, 222, 928, 1340
MflI RGATCY 3 cut(s) 160, 928, 1340
MhlI GDGCHC 3 cut(s) 117, 151, 287
MluCI AATT 8 cut(s) 339, 454, 553, 639, 984, 1027, 1289, 1357
MlyI GAGTC 1 cut(s) 810
MroXI GAANNNNTTC 2 cut(s) 1231, 1319
MseI TTAA 4 cut(s) 336, 530, 558, 579
MspA1I CMGCKG 1 cut(s) 446
MspI CCGG 1 cut(s) 464
Mva1269I GAATGC 1 cut(s) 250
MvnI CGCG 1 cut(s) 281
MwoI GCNNNNNNNGC 5 cut(s) 112, 236, 245, 424, 1055
NcoI CCATGG 2 cut(s) 1222, 1310
NdeII GATC 5 cut(s) 154, 160, 222, 928, 1340
NlaIV GGNNCC 4 cut(s) 216, 660, 1114, 1220
NsbI TGCGCA 1 cut(s) 833
NspI RCATGY 1 cut(s) 681
PaeR7I CTCGAG 1 cut(s) 110
PagI TCATGA 1 cut(s) 951
PaqCI CACCTGC 1 cut(s) 613
PciSI GCTCTTC 1 cut(s) 292
PctI GAATGC 1 cut(s) 250
PdmI GAANNNNTTC 2 cut(s) 1231, 1319
PfeI GAWTC 5 cut(s) 182, 506, 734, 782, 1138
PinAI ACCGGT 1 cut(s) 463
PkrI GCNGC 7 cut(s) 238, 381, 445, 448, 831, 862, 946
PleI GAGTC 1 cut(s) 809
PpsI GAGTC 1 cut(s) 809
PpuMI RGGWCCY 1 cut(s) 659
Psp124BI GAGCTC 2 cut(s) 117, 287
Psp5II RGGWCCY 1 cut(s) 659
PspFI CCCAGC 1 cut(s) 478
PspN4I GGNNCC 4 cut(s) 216, 660, 1114, 1220
PspPI GGNCC 4 cut(s) 214, 617, 659, 971
PspPPI RGGWCCY 1 cut(s) 659
PstI CTGCAG 3 cut(s) 241, 381, 445
PsuI RGATCY 3 cut(s) 160, 928, 1340
PvuII CAGCTG 1 cut(s) 446
RsaI GTAC 3 cut(s) 873, 1146, 1220
RsaNI GTAC 3 cut(s) 872, 1145, 1219
SacI GAGCTC 2 cut(s) 117, 287
SapI GCTCTTC 1 cut(s) 292
SaqAI TTAA 4 cut(s) 336, 530, 558, 579
SatI GCNGC 7 cut(s) 237, 380, 444, 447, 830, 861, 945
Sau3AI GATC 5 cut(s) 154, 160, 222, 928, 1340
Sau96I GGNCC 4 cut(s) 214, 617, 659, 971
ScaI AGTACT 1 cut(s) 1146
SchI GAGTC 1 cut(s) 810
SduI GDGCHC 3 cut(s) 117, 151, 287
SfaNI GCATC 3 cut(s) 931, 1060, 1159
SfcI CTRYAG 3 cut(s) 237, 377, 441
Sfr274I CTCGAG 1 cut(s) 110
SinI GGWCC 2 cut(s) 214, 659
SlaI CTCGAG 1 cut(s) 110
SmlI CTYRAG 2 cut(s) 110, 514
SmoI CTYRAG 2 cut(s) 110, 514
Sse9I AATT 8 cut(s) 339, 454, 553, 639, 984, 1027, 1289, 1357
SsiI CCGC 7 cut(s) 279, 332, 351, 620, 935, 1262, 1344
SspI AATATT 1 cut(s) 1333
SspMI CTAG 4 cut(s) 503, 926, 1046, 1299
SstI GAGCTC 2 cut(s) 117, 287
StyI CCWWGG 3 cut(s) 204, 1222, 1310
TaaI ACNGT 5 cut(s) 326, 727, 994, 1117, 1185
TaqI TCGA 4 cut(s) 111, 153, 939, 1239
TaqII GACCGA 1 cut(s) 971
TasI AATT 8 cut(s) 339, 454, 553, 639, 984, 1027, 1289, 1357
TatI WGTACW 2 cut(s) 871, 1144
TfiI GAWTC 5 cut(s) 182, 506, 734, 782, 1138
Tru1I TTAA 4 cut(s) 336, 530, 558, 579
Tru9I TTAA 4 cut(s) 336, 530, 558, 579
TscAI CASTG 6 cut(s) 15, 370, 412, 730, 981, 997
TseI GCWGC 7 cut(s) 236, 379, 443, 446, 829, 860, 944
TspDTI ATGAA 6 cut(s) 144, 596, 895, 906, 1012, 1273
TspRI CASTG 6 cut(s) 15, 370, 412, 730, 981, 997
VpaK11BI GGWCC 2 cut(s) 214, 659
XapI RAATTY 3 cut(s) 454, 1027, 1289
XbaI TCTAGA 1 cut(s) 1298
XceI RCATGY 1 cut(s) 681
XhoI CTCGAG 1 cut(s) 110
XmnI GAANNNNTTC 2 cut(s) 1231, 1319
XspI CTAG 4 cut(s) 503, 926, 1046, 1299
ZrmI AGTACT 1 cut(s) 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.