Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0011492

Physical Location & Seq

Genomic Coordinates Reverse (-)

35513057 .. 35516059

Gene Structure 3003 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1300400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 645 bp

ATGGTGTGCATACGCAAGGCCACCATCGACGACCTCCTGGCGATGCAAGCCTGCAACCTCTTCTGCCTCCCTGAGAACTACCAGATGAAGTACTACCTCTACCACATCCTCTCATGGCCGCAGCTCCTATACGTCGCCGAAGACTACAACGGCCGCATCGTCGGCTACGTCCTCGCCAAGATGGAGGAGGAGAGCAACGAGTGCCACGGACACATCACCTCCCTCGCCGTCCTCCGCACCCACCGCAAACTCGGCCTCGCCACCAAGCTCATGAGCGCCGCCCAGAACGCCATGGAACAGGTGTTCGCGGCGGAGTACGTGTCGCTTCACGTGAGGAAGAGCAATCGGGCGGCGTTCAATTTGTACACGGGGACTTTGGGGTATAAGATTCATGATGTGGAGGCGAAGTACTATGCCGATGGGGAAGATGCGTATGATATGAGGAAGGAGCTCAAGGGGAAGAAGGTGCATGGACATAGTCATGGGCATGGGCATGGTCACGGTCACGGTCACGGGCATGGGCATCACCACCATCATCACCATCATGAAGGTGGGTGTTGCTCAGGGGAGGCAGTGAAACCAGAAAAGGCGGAGGCGAAGAAGGTCGATAGAGGGAATGCTAAGGCGGAGGCCAAAGCGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004596 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006950 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010035 GO:0010154 GO:0010467 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017198 GO:0018002 GO:0018193 GO:0018200 GO:0018209 GO:0019538 GO:0022414 GO:0022626 GO:0030920 GO:0031248 GO:0031365 GO:0031414 GO:0031415 GO:0032501 GO:0032502 GO:0032991 GO:0034212 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051604 GO:0061458 GO:0071704 GO:1901564 GO:1901700 GO:1902493 GO:1902494 GO:1990189 GO:1990190 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

215

Amino Acids

23.97

Weight (kDa)

8.17

Isoelectric Point (pI)

25.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	21 - 128	6.4e-17	Acetyltransferase (GNAT) family
Acetyltransf_7	PF13508	42 - 122	6.2e-09	Acetyltransferase (GNAT) domain
Acetyltransf_10	PF13673	43 - 151	8.3e-10	Acetyltransferase (GNAT) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13780
fragaria_vesca	FvH4_7g01790
malus_domestica	MD02G1300400.v1.1 MD07G1016300.v1.1 MD07G1016800.v1.1 MD07G1023300.v1.1
prunus_persica	Prupe.2G024200_v2.0.a1 Prupe.2G024200_v2.0.a1
pyrus_communis	pycom07g01770
rosa_chinensis	RchiOBHm_Chr1g0318401
rosa_laevigata	RLG00000030541
rosa_multiflora	Rmu_sc0002662.1_g000015 Rmu_sc0003936.1_g000038
rosa_roxburghii	Rroxscaffold_4G00329270
rosa_rugosa	Rorug01G0021000
rosa_samantha	Rh1AG033100 Rh1BG028900 Rh1CG031400 Rh1DG038100
rosa_wichuraiana	Rw1G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	308
AcoI	YGGCCR	2 cut(s)	116, 151
AcvI	CACGTG	1 cut(s)	331
AfaI	GTAC	4 cut(s)	92, 317, 365, 410
AflIII	ACRYGT	1 cut(s)	318
AgsI	TTSAA	1 cut(s)	358
AjnI	CCWGG	1 cut(s)	36
AloI	GAACNNNNNNTCC	2 cut(s)	287, 319
AluBI	AGCT	3 cut(s)	124, 268, 451
AluI	AGCT	3 cut(s)	124, 268, 451
Alw21I	GWGCWC	1 cut(s)	453
AoxI	GGCC	5 cut(s)	18, 116, 151, 253, 630
ApeKI	GCWGC	1 cut(s)	121
AspLEI	GCGC	1 cut(s)	278
AsuHPI	GGTGA	3 cut(s)	208, 518, 530
BanII	GRGCYC	1 cut(s)	453
BbrPI	CACGTG	1 cut(s)	331
BbsI	GAAGAC	1 cut(s)	147
Bbv12I	GWGCWC	1 cut(s)	453
BbvI	GCAGC	1 cut(s)	133
BccI	CCATC	5 cut(s)	32, 175, 413, 540, 549
BceAI	ACGGC	2 cut(s)	166, 212
BciT130I	CCWGG	1 cut(s)	38
BfoI	RGCGCY	1 cut(s)	279
BglI	GCCNNNNNGGC	1 cut(s)	638
BisI	GCNGC	7 cut(s)	119, 122, 154, 279, 309, 351, 639
BlsI	GCNGC	7 cut(s)	120, 123, 155, 280, 310, 352, 640
BmcAI	AGTACT	2 cut(s)	92, 410
Bme1390I	CCNGG	1 cut(s)	38
BmrFI	CCNGG	1 cut(s)	38
BmsI	GCATC	4 cut(s)	33, 165, 418, 532
BpiI	GAAGAC	1 cut(s)	147
Bpu10I	CCTNAGC	2 cut(s)	562, 621
BpuEI	CTTGAG	1 cut(s)	437
BsaAI	YACGTR	2 cut(s)	319, 331
BsaJI	CCNNGG	2 cut(s)	205, 291
BsaXI	ACNNNNNCTCC	6 cut(s)	203, 233, 305, 335, 392, 422
BseBI	CCWGG	1 cut(s)	38
BseDI	CCNNGG	2 cut(s)	205, 291
BseGI	GGATG	1 cut(s)	105
BseMII	CTCAG	2 cut(s)	63, 576
BseRI	GAGGAG	2 cut(s)	200, 203
BseX3I	CGGCCG	1 cut(s)	151
BseXI	GCAGC	1 cut(s)	133
Bsh1236I	CGCG	1 cut(s)	308
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	5 cut(s)	20, 118, 153, 255, 632
BsiEI	CGRYCG	1 cut(s)	154
BsiHKAI	GWGCWC	1 cut(s)	453
BslFI	GGGAC	1 cut(s)	385
BsmFI	GGGAC	1 cut(s)	385
BsmI	GAATGC	1 cut(s)	622
BsnI	GGCC	5 cut(s)	20, 118, 153, 255, 632
Bsp1286I	GDGCHC	1 cut(s)	453
Bsp1407I	TGTACA	1 cut(s)	363
Bsp19I	CCATGG	1 cut(s)	291
BspANI	GGCC	5 cut(s)	20, 118, 153, 255, 632
BspCNI	CTCAG	2 cut(s)	64, 575
BspFNI	CGCG	1 cut(s)	308
BspHI	TCATGA	3 cut(s)	270, 391, 544
BspQI	GCTCTTC	1 cut(s)	332
BsrGI	TGTACA	1 cut(s)	363
BssECI	CCNNGG	2 cut(s)	205, 291
BssT1I	CCWWGG	1 cut(s)	291
Bst2UI	CCWGG	1 cut(s)	38
Bst4CI	ACNGT	2 cut(s)	503, 509
Bst6I	CTCTTC	2 cut(s)	65, 332
BstAPI	GCANNNNNTGC	1 cut(s)	201
BstAUI	TGTACA	1 cut(s)	363
BstBAI	YACGTR	2 cut(s)	319, 331
BstC8I	GCNNGC	2 cut(s)	48, 52
BstDEI	CTNAG	3 cut(s)	72, 562, 621
BstDSI	CCRYGG	2 cut(s)	205, 291
BstF5I	GGATG	1 cut(s)	105
BstFNI	CGCG	1 cut(s)	308
BstH2I	RGCGCY	1 cut(s)	279
BstHHI	GCGC	1 cut(s)	278
BstMCI	CGRYCG	1 cut(s)	154
BstMWI	GCNNNNNNNGC	7 cut(s)	47, 162, 201, 243, 252, 287, 638
BstNI	CCWGG	1 cut(s)	38
BstSCI	CCNGG	1 cut(s)	36
BstUI	CGCG	1 cut(s)	308
BstV1I	GCAGC	1 cut(s)	133
BstV2I	GAAGAC	1 cut(s)	147
BstZI	CGGCCG	1 cut(s)	151
BsuRI	GGCC	5 cut(s)	20, 118, 153, 255, 632
BtgI	CCRYGG	2 cut(s)	205, 291
BtgZI	GCGATG	1 cut(s)	56
BtsCI	GGATG	1 cut(s)	105
BtsI	GCAGTG	1 cut(s)	579
BtsIMutI	CAGTG	1 cut(s)	579
Cac8I	GCNNGC	2 cut(s)	48, 52
CciI	TCATGA	3 cut(s)	270, 391, 544
CfoI	GCGC	1 cut(s)	278
Csp6I	GTAC	4 cut(s)	91, 316, 364, 409
CviQI	GTAC	4 cut(s)	91, 316, 364, 409
DdeI	CTNAG	3 cut(s)	72, 562, 621
EaeI	YGGCCR	2 cut(s)	116, 151
EagI	CGGCCG	1 cut(s)	151
Eam1104I	CTCTTC	2 cut(s)	65, 332
EarI	CTCTTC	2 cut(s)	65, 332
EciI	GGCGGA	3 cut(s)	326, 605, 641
Ecl136II	GAGCTC	1 cut(s)	451
EclXI	CGGCCG	1 cut(s)	151
Eco130I	CCWWGG	1 cut(s)	291
Eco24I	GRGCYC	1 cut(s)	453
Eco52I	CGGCCG	1 cut(s)	151
Eco53kI	GAGCTC	1 cut(s)	451
Eco72I	CACGTG	1 cut(s)	331
EcoICRI	GAGCTC	1 cut(s)	451
EcoRII	CCWGG	1 cut(s)	36
EcoT14I	CCWWGG	1 cut(s)	291
EcoT38I	GRGCYC	1 cut(s)	453
ErhI	CCWWGG	1 cut(s)	291
FaqI	GGGAC	1 cut(s)	385
Fnu4HI	GCNGC	7 cut(s)	119, 122, 154, 279, 309, 351, 639
FokI	GGATG	1 cut(s)	92
FriOI	GRGCYC	1 cut(s)	453
Fsp4HI	GCNGC	7 cut(s)	119, 122, 154, 279, 309, 351, 639
GlaI	GCGC	1 cut(s)	277
GluI	GCNGC	7 cut(s)	119, 122, 154, 279, 309, 351, 639
HaeII	RGCGCY	1 cut(s)	279
HaeIII	GGCC	5 cut(s)	20, 118, 153, 255, 632
HhaI	GCGC	1 cut(s)	278
Hin6I	GCGC	1 cut(s)	276
HinP1I	GCGC	1 cut(s)	276
HinfI	GANTC	1 cut(s)	388
HphI	GGTGA	3 cut(s)	208, 518, 530
Hpy166II	GTNNAC	1 cut(s)	366
Hpy188III	TCNNGA	3 cut(s)	271, 392, 545
Hpy8I	GTNNAC	1 cut(s)	366
Hpy99I	CGWCG	3 cut(s)	32, 137, 164
HpyAV	CCTTC	4 cut(s)	439, 457, 542, 595
HpyCH4III	ACNGT	2 cut(s)	503, 509
HpyCH4IV	ACGT	4 cut(s)	132, 168, 318, 330
HpyCH4V	TGCA	4 cut(s)	9, 46, 54, 469
HpyF10VI	GCNNNNNNNGC	7 cut(s)	47, 162, 201, 243, 252, 287, 638
HpyF3I	CTNAG	3 cut(s)	72, 562, 621
HpySE526I	ACGT	4 cut(s)	132, 168, 318, 330
HspAI	GCGC	1 cut(s)	276
LguI	GCTCTTC	1 cut(s)	332
LmnI	GCTCC	2 cut(s)	129, 448
LpnPI	CCDG	9 cut(s)	23, 50, 64, 84, 95, 284, 296, 549, 594
Lsp1109I	GCAGC	1 cut(s)	133
LweI	GCATC	4 cut(s)	33, 165, 418, 532
MaeII	ACGT	4 cut(s)	132, 168, 318, 330
MaeIII	GTNAC	3 cut(s)	497, 503, 509
MboII	GAAGA	6 cut(s)	52, 152, 349, 437, 472, 610
MhlI	GDGCHC	1 cut(s)	453
MluCI	AATT	1 cut(s)	358
MslI	CAYNNNNRTG	6 cut(s)	480, 486, 492, 516, 543, 549
MspR9I	CCNGG	1 cut(s)	38
Mva1269I	GAATGC	1 cut(s)	622
MvaI	CCWGG	1 cut(s)	38
MvnI	CGCG	1 cut(s)	308
MwoI	GCNNNNNNNGC	7 cut(s)	47, 162, 201, 243, 252, 287, 638
NcoI	CCATGG	1 cut(s)	291
NmeAIII	GCCGAG	1 cut(s)	231
NmuCI	GTSAC	3 cut(s)	497, 503, 509
PagI	TCATGA	3 cut(s)	270, 391, 544
PciSI	GCTCTTC	1 cut(s)	332
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 165
PctI	GAATGC	1 cut(s)	622
PfeI	GAWTC	1 cut(s)	388
PflFI	GACNNNGTC	1 cut(s)	477
PkrI	GCNGC	7 cut(s)	120, 123, 155, 280, 310, 352, 640
PmaCI	CACGTG	1 cut(s)	331
PmlI	CACGTG	1 cut(s)	331
Ppu21I	YACGTR	2 cut(s)	319, 331
Psp124BI	GAGCTC	1 cut(s)	453
Psp6I	CCWGG	1 cut(s)	36
PspCI	CACGTG	1 cut(s)	331
PspGI	CCWGG	1 cut(s)	36
PsyI	GACNNNGTC	1 cut(s)	477
RsaI	GTAC	4 cut(s)	92, 317, 365, 410
RsaNI	GTAC	4 cut(s)	91, 316, 364, 409
RseI	CAYNNNNRTG	6 cut(s)	480, 486, 492, 516, 543, 549
SacI	GAGCTC	1 cut(s)	453
SapI	GCTCTTC	1 cut(s)	332
SatI	GCNGC	7 cut(s)	119, 122, 154, 279, 309, 351, 639
ScaI	AGTACT	2 cut(s)	92, 410
ScrFI	CCNGG	1 cut(s)	38
SduI	GDGCHC	1 cut(s)	453
SfaNI	GCATC	4 cut(s)	33, 165, 418, 532
SmiMI	CAYNNNNRTG	6 cut(s)	480, 486, 492, 516, 543, 549
SmlI	CTYRAG	1 cut(s)	452
SmoI	CTYRAG	1 cut(s)	452
Sse9I	AATT	1 cut(s)	358
SstI	GAGCTC	1 cut(s)	453
StyD4I	CCNGG	1 cut(s)	36
StyI	CCWWGG	1 cut(s)	291
TaaI	ACNGT	2 cut(s)	503, 509
TaiI	ACGT	4 cut(s)	135, 171, 321, 333
TaqI	TCGA	2 cut(s)	27, 606
TasI	AATT	1 cut(s)	358
TatI	WGTACW	3 cut(s)	90, 363, 408
TauI	GCSGC	6 cut(s)	121, 156, 281, 311, 353, 641
TfiI	GAWTC	1 cut(s)	388
TscAI	CASTG	1 cut(s)	579
TseFI	GTSAC	3 cut(s)	497, 503, 509
TseI	GCWGC	1 cut(s)	121
Tsp45I	GTSAC	3 cut(s)	497, 503, 509
TspDTI	ATGAA	3 cut(s)	101, 380, 561
TspGWI	ACGGA	1 cut(s)	222
TspRI	CASTG	1 cut(s)	579
Tth111I	GACNNNGTC	1 cut(s)	477
XcmI	CCANNNNNNNNNTGG	1 cut(s)	548
ZrmI	AGTACT	2 cut(s)	92, 410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.