Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0011492

Physical Location & Seq

Genomic Coordinates Forward (+)

1943940 .. 1947016

Gene Structure 3077 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1023300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 615 bp

ATGGTGTGCATACGCAAGGCCACAATCGACGACCTCTTGGCGATGCAAGCCTGCAACCTTTTCTGCCTCCCTGAGAATTACCAGATGAAGTACTACCTCTATCACATCCTCTCATGGCCGCAGCTCCTCTACGTCGCCGAGGACTACAACGGCCGCATCGTTGGCTACGTCCTGGCCAAGATGGAGGAGGAGAGCAACGAGTGCCACGGCCACATCACCTCCCTCGCCGTCCTCCGCACCCACCGCAAACTCGGTCTCGCCACCAAGCTCATGAGCGCCGCCCAGAACGCCATGGAACAGGTGTTTGCGGCGGAGTACGTGTCTCTTCATGTGAGGAAGAGCAATCGGGCAGCGTTCAATTTGTACACGGAGACTTTGGGGTATAAGATTCATGATGTGGAGGCGAAGTACTATGCCGATGGGGAAGATGCGTATGATATGAGGAAGGAGCTCAAGGGAAAGAAGGTGTATGGACATAGTCATGGGCATGGGCATCACCACCATCATCACCATCATGAAGGTGGGTGTTGCTCAGGGGAGGTGGCAAAACCAGATAAGGCAGAGGCGAAAAAGGTCGGGAGAGGGAATGCCAAGGCGGAGGCCAAAGCGGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004596 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006950 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010035 GO:0010154 GO:0010467 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017198 GO:0018002 GO:0018193 GO:0018200 GO:0018209 GO:0019538 GO:0022414 GO:0022626 GO:0030920 GO:0031248 GO:0031365 GO:0031414 GO:0031415 GO:0032501 GO:0032502 GO:0032991 GO:0034212 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051604 GO:0061458 GO:0071704 GO:1901564 GO:1901700 GO:1902493 GO:1902494 GO:1990189 GO:1990190 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

205

Amino Acids

23.06

Weight (kDa)

8.15

Isoelectric Point (pI)

29.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	21 - 128	7e-18	Acetyltransferase (GNAT) family
Acetyltransf_7	PF13508	42 - 129	1e-09	Acetyltransferase (GNAT) domain
Acetyltransf_10	PF13673	43 - 151	2.2e-10	Acetyltransferase (GNAT) domain
FR47	PF08445	69 - 131	4e-06	FR47-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13780
fragaria_vesca	FvH4_7g01790
malus_domestica	MD02G1300400.v1.1 MD07G1016300.v1.1 MD07G1016800.v1.1 MD07G1023300.v1.1
prunus_persica	Prupe.2G024200_v2.0.a1 Prupe.2G024200_v2.0.a1
pyrus_communis	pycom07g01770
rosa_chinensis	RchiOBHm_Chr1g0318401
rosa_laevigata	RLG00000030541
rosa_multiflora	Rmu_sc0002662.1_g000015 Rmu_sc0003936.1_g000038
rosa_roxburghii	Rroxscaffold_4G00329270
rosa_rugosa	Rorug01G0021000
rosa_samantha	Rh1AG033100 Rh1BG028900 Rh1CG031400 Rh1DG038100
rosa_wichuraiana	Rw1G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	9 cut(s)	119, 154, 235, 244, 279, 308, 311, 596, 608
AcoI	YGGCCR	4 cut(s)	116, 151, 174, 208
AfaI	GTAC	4 cut(s)	92, 317, 365, 410
AflIII	ACRYGT	1 cut(s)	318
AgsI	TTSAA	1 cut(s)	358
AjnI	CCWGG	1 cut(s)	171
AluBI	AGCT	3 cut(s)	124, 268, 451
AluI	AGCT	3 cut(s)	124, 268, 451
Alw21I	GWGCWC	1 cut(s)	453
Alw26I	GTCTC	3 cut(s)	260, 327, 365
AoxI	GGCC	6 cut(s)	18, 116, 151, 174, 208, 600
ApeKI	GCWGC	2 cut(s)	121, 350
AspLEI	GCGC	1 cut(s)	278
AsuHPI	GGTGA	3 cut(s)	208, 488, 500
BalI	TGGCCA	1 cut(s)	176
BanII	GRGCYC	1 cut(s)	453
Bbv12I	GWGCWC	1 cut(s)	453
BbvI	GCAGC	2 cut(s)	133, 362
BccI	CCATC	4 cut(s)	175, 413, 510, 519
BceAI	ACGGC	3 cut(s)	166, 212, 223
BciT130I	CCWGG	1 cut(s)	173
BcoDI	GTCTC	3 cut(s)	260, 327, 365
BfoI	RGCGCY	1 cut(s)	279
BisI	GCNGC	6 cut(s)	119, 122, 154, 279, 309, 351
BlsI	GCNGC	6 cut(s)	120, 123, 155, 280, 310, 352
BmcAI	AGTACT	2 cut(s)	92, 410
Bme1390I	CCNGG	1 cut(s)	173
BmrFI	CCNGG	1 cut(s)	173
BmsI	GCATC	4 cut(s)	33, 165, 418, 502
Bpu10I	CCTNAGC	1 cut(s)	532
BpuEI	CTTGAG	1 cut(s)	437
BsaAI	YACGTR	1 cut(s)	319
BsaI	GGTCTC	1 cut(s)	260
BsaJI	CCNNGG	4 cut(s)	138, 205, 291, 591
BsaXI	ACNNNNNCTCC	6 cut(s)	203, 233, 305, 335, 392, 422
BseBI	CCWGG	1 cut(s)	173
BseDI	CCNNGG	4 cut(s)	138, 205, 291, 591
BseGI	GGATG	1 cut(s)	105
BseMII	CTCAG	2 cut(s)	63, 546
BseRI	GAGGAG	3 cut(s)	116, 200, 203
BseX3I	CGGCCG	1 cut(s)	151
BseXI	GCAGC	2 cut(s)	133, 362
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	6 cut(s)	20, 118, 153, 176, 210, 602
BsiEI	CGRYCG	1 cut(s)	154
BsiHKAI	GWGCWC	1 cut(s)	453
BsmAI	GTCTC	3 cut(s)	260, 327, 365
BsmI	GAATGC	1 cut(s)	592
BsnI	GGCC	6 cut(s)	20, 118, 153, 176, 210, 602
Bso31I	GGTCTC	1 cut(s)	260
Bsp1286I	GDGCHC	1 cut(s)	453
Bsp1407I	TGTACA	1 cut(s)	363
Bsp19I	CCATGG	1 cut(s)	291
BspACI	CCGC	9 cut(s)	119, 154, 235, 244, 279, 308, 311, 596, 608
BspANI	GGCC	6 cut(s)	20, 118, 153, 176, 210, 602
BspCNI	CTCAG	2 cut(s)	64, 545
BspHI	TCATGA	3 cut(s)	270, 391, 514
BspQI	GCTCTTC	1 cut(s)	332
BspTNI	GGTCTC	1 cut(s)	260
BsrGI	TGTACA	1 cut(s)	363
BssECI	CCNNGG	4 cut(s)	138, 205, 291, 591
BssT1I	CCWWGG	2 cut(s)	291, 591
Bst2UI	CCWGG	1 cut(s)	173
Bst6I	CTCTTC	2 cut(s)	330, 332
BstAPI	GCANNNNNTGC	1 cut(s)	201
BstAUI	TGTACA	1 cut(s)	363
BstBAI	YACGTR	1 cut(s)	319
BstC8I	GCNNGC	2 cut(s)	48, 52
BstDEI	CTNAG	2 cut(s)	72, 532
BstDSI	CCRYGG	2 cut(s)	205, 291
BstF5I	GGATG	1 cut(s)	105
BstH2I	RGCGCY	1 cut(s)	279
BstHHI	GCGC	1 cut(s)	278
BstMAI	GTCTC	3 cut(s)	260, 327, 365
BstMCI	CGRYCG	1 cut(s)	154
BstMWI	GCNNNNNNNGC	5 cut(s)	47, 162, 201, 243, 287
BstNI	CCWGG	1 cut(s)	173
BstSCI	CCNGG	1 cut(s)	171
BstV1I	GCAGC	2 cut(s)	133, 362
BstZI	CGGCCG	1 cut(s)	151
BsuRI	GGCC	6 cut(s)	20, 118, 153, 176, 210, 602
BtgI	CCRYGG	2 cut(s)	205, 291
BtgZI	GCGATG	1 cut(s)	56
BtsCI	GGATG	1 cut(s)	105
Cac8I	GCNNGC	2 cut(s)	48, 52
CciI	TCATGA	3 cut(s)	270, 391, 514
CfoI	GCGC	1 cut(s)	278
Csp6I	GTAC	4 cut(s)	91, 316, 364, 409
CviAII	CATG	8 cut(s)	114, 271, 292, 329, 392, 482, 488, 515
CviQI	GTAC	4 cut(s)	91, 316, 364, 409
DdeI	CTNAG	2 cut(s)	72, 532
EaeI	YGGCCR	4 cut(s)	116, 151, 174, 208
EagI	CGGCCG	1 cut(s)	151
Eam1104I	CTCTTC	2 cut(s)	330, 332
EarI	CTCTTC	2 cut(s)	330, 332
EciI	GGCGGA	2 cut(s)	326, 611
Ecl136II	GAGCTC	1 cut(s)	451
EclXI	CGGCCG	1 cut(s)	151
Eco130I	CCWWGG	2 cut(s)	291, 591
Eco24I	GRGCYC	1 cut(s)	453
Eco31I	GGTCTC	1 cut(s)	260
Eco52I	CGGCCG	1 cut(s)	151
Eco53kI	GAGCTC	1 cut(s)	451
EcoICRI	GAGCTC	1 cut(s)	451
EcoRII	CCWGG	1 cut(s)	171
EcoT14I	CCWWGG	2 cut(s)	291, 591
EcoT38I	GRGCYC	1 cut(s)	453
ErhI	CCWWGG	2 cut(s)	291, 591
FaeI	CATG	8 cut(s)	117, 274, 295, 332, 395, 485, 491, 518
FatI	CATG	8 cut(s)	113, 270, 291, 328, 391, 481, 487, 514
Fnu4HI	GCNGC	6 cut(s)	119, 122, 154, 279, 309, 351
FokI	GGATG	1 cut(s)	92
FriOI	GRGCYC	1 cut(s)	453
Fsp4HI	GCNGC	6 cut(s)	119, 122, 154, 279, 309, 351
GlaI	GCGC	1 cut(s)	277
GluI	GCNGC	6 cut(s)	119, 122, 154, 279, 309, 351
HaeII	RGCGCY	1 cut(s)	279
HaeIII	GGCC	6 cut(s)	20, 118, 153, 176, 210, 602
HhaI	GCGC	1 cut(s)	278
Hin1II	CATG	8 cut(s)	117, 274, 295, 332, 395, 485, 491, 518
Hin6I	GCGC	1 cut(s)	276
HinP1I	GCGC	1 cut(s)	276
HinfI	GANTC	1 cut(s)	388
HphI	GGTGA	3 cut(s)	208, 488, 500
Hpy166II	GTNNAC	1 cut(s)	366
Hpy188III	TCNNGA	4 cut(s)	271, 392, 515, 577
Hpy8I	GTNNAC	1 cut(s)	366
Hpy99I	CGWCG	2 cut(s)	32, 137
HpyAV	CCTTC	3 cut(s)	439, 457, 512
HpyCH4IV	ACGT	3 cut(s)	132, 168, 318
HpyCH4V	TGCA	3 cut(s)	9, 46, 54
HpyF10VI	GCNNNNNNNGC	5 cut(s)	47, 162, 201, 243, 287
HpyF3I	CTNAG	2 cut(s)	72, 532
HpySE526I	ACGT	3 cut(s)	132, 168, 318
Hsp92II	CATG	8 cut(s)	117, 274, 295, 332, 395, 485, 491, 518
HspAI	GCGC	1 cut(s)	276
LguI	GCTCTTC	1 cut(s)	332
LmnI	GCTCC	2 cut(s)	129, 448
LpnPI	CCDG	9 cut(s)	64, 84, 95, 158, 185, 284, 296, 519, 564
Lsp1109I	GCAGC	2 cut(s)	133, 362
LweI	GCATC	4 cut(s)	33, 165, 418, 502
MaeII	ACGT	3 cut(s)	132, 168, 318
MboII	GAAGA	3 cut(s)	317, 349, 437
MhlI	GDGCHC	1 cut(s)	453
MlsI	TGGCCA	1 cut(s)	176
MluCI	AATT	2 cut(s)	76, 358
MluNI	TGGCCA	1 cut(s)	176
Mox20I	TGGCCA	1 cut(s)	176
MscI	TGGCCA	1 cut(s)	176
MslI	CAYNNNNRTG	4 cut(s)	480, 486, 513, 519
Msp20I	TGGCCA	1 cut(s)	176
MspR9I	CCNGG	1 cut(s)	173
Mva1269I	GAATGC	1 cut(s)	592
MvaI	CCWGG	1 cut(s)	173
MwoI	GCNNNNNNNGC	5 cut(s)	47, 162, 201, 243, 287
NcoI	CCATGG	1 cut(s)	291
NlaIII	CATG	8 cut(s)	117, 274, 295, 332, 395, 485, 491, 518
NmeAIII	GCCGAG	1 cut(s)	163
PagI	TCATGA	3 cut(s)	270, 391, 514
PciSI	GCTCTTC	1 cut(s)	332
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 165
PctI	GAATGC	1 cut(s)	592
PfeI	GAWTC	1 cut(s)	388
PflFI	GACNNNGTC	1 cut(s)	477
PkrI	GCNGC	6 cut(s)	120, 123, 155, 280, 310, 352
Ppu21I	YACGTR	1 cut(s)	319
Psp124BI	GAGCTC	1 cut(s)	453
Psp6I	CCWGG	1 cut(s)	171
PspGI	CCWGG	1 cut(s)	171
PsyI	GACNNNGTC	1 cut(s)	477
RsaI	GTAC	4 cut(s)	92, 317, 365, 410
RsaNI	GTAC	4 cut(s)	91, 316, 364, 409
RseI	CAYNNNNRTG	4 cut(s)	480, 486, 513, 519
SacI	GAGCTC	1 cut(s)	453
SapI	GCTCTTC	1 cut(s)	332
SatI	GCNGC	6 cut(s)	119, 122, 154, 279, 309, 351
ScaI	AGTACT	2 cut(s)	92, 410
ScrFI	CCNGG	1 cut(s)	173
SduI	GDGCHC	1 cut(s)	453
SfaNI	GCATC	4 cut(s)	33, 165, 418, 502
SmiMI	CAYNNNNRTG	4 cut(s)	480, 486, 513, 519
SmlI	CTYRAG	1 cut(s)	452
SmoI	CTYRAG	1 cut(s)	452
Sse9I	AATT	2 cut(s)	76, 358
SsiI	CCGC	9 cut(s)	119, 154, 235, 244, 279, 308, 311, 596, 608
SstI	GAGCTC	1 cut(s)	453
StyD4I	CCNGG	1 cut(s)	171
StyI	CCWWGG	2 cut(s)	291, 591
TaiI	ACGT	3 cut(s)	135, 171, 321
TaqI	TCGA	1 cut(s)	27
TaqII	GACCGA	1 cut(s)	242
TasI	AATT	2 cut(s)	76, 358
TatI	WGTACW	3 cut(s)	90, 363, 408
TauI	GCSGC	4 cut(s)	121, 156, 281, 311
TfiI	GAWTC	1 cut(s)	388
TseI	GCWGC	2 cut(s)	121, 350
TspDTI	ATGAA	4 cut(s)	101, 317, 380, 531
TspGWI	ACGGA	1 cut(s)	383
Tth111I	GACNNNGTC	1 cut(s)	477
XcmI	CCANNNNNNNNNTGG	1 cut(s)	518
ZrmI	AGTACT	2 cut(s)	92, 410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.