Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0011492

Physical Location & Seq

Genomic Coordinates Reverse (-)

1455931 .. 1456341

Gene Structure 411 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1016300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 411 bp

ATGGTGTGCATACGCAAGGCCGCAATCGACAACCTCCTGGCGATGCAAGCCTGCAACCTTTTCTGCCTCCCTGAGAGTTGCCAGATGAAGTACTACCTCTATCACATCCTCTCATGGCCGCAGCTCCTCTACGTCGCCGAAGACTACAACGGTCGCATCGTCGGCTACGTCCTGGCCAAGATGGAGGAGGAGAGTAACGAGTGCCACGGCCACATTACCTCCCTCGCCGTCCTCCGCACCTACCGCAAACTCGGCCTCGCCACCAAGCTCATGAACGCCGCCCAGAACGCCAGGGAACAGGTGTTTGCGGCGGAGTACGTGTCGCTTCATGTGAGGAAGAGCAATCGGGCAGCGTTCAATTTGTACACTGAGACTTTGGGATATAAGATTCATGATGTGAAGGCGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004596 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006950 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010035 GO:0010154 GO:0010467 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017198 GO:0018002 GO:0018193 GO:0018200 GO:0018209 GO:0019538 GO:0022414 GO:0022626 GO:0030920 GO:0031248 GO:0031365 GO:0031414 GO:0031415 GO:0032501 GO:0032502 GO:0032991 GO:0034212 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051604 GO:0061458 GO:0071704 GO:1901564 GO:1901700 GO:1902493 GO:1902494 GO:1990189 GO:1990190 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

137

Amino Acids

15.58

Weight (kDa)

8.79

Isoelectric Point (pI)

43.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	23 - 128	1.2e-17	Acetyltransferase (GNAT) family
Acetyltransf_7	PF13508	42 - 129	8.6e-11	Acetyltransferase (GNAT) domain
Acetyltransf_10	PF13673	43 - 129	5e-09	Acetyltransferase (GNAT) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13780
fragaria_vesca	FvH4_7g01790
malus_domestica	MD02G1300400.v1.1 MD07G1016300.v1.1 MD07G1016800.v1.1 MD07G1023300.v1.1
prunus_persica	Prupe.2G024200_v2.0.a1 Prupe.2G024200_v2.0.a1
pyrus_communis	pycom07g01770
rosa_chinensis	RchiOBHm_Chr1g0318401
rosa_laevigata	RLG00000030541
rosa_multiflora	Rmu_sc0002662.1_g000015 Rmu_sc0003936.1_g000038
rosa_roxburghii	Rroxscaffold_4G00329270
rosa_rugosa	Rorug01G0021000
rosa_samantha	Rh1AG033100 Rh1BG028900 Rh1CG031400 Rh1DG038100
rosa_wichuraiana	Rw1G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	7 cut(s)	21, 119, 235, 244, 279, 308, 311
AcoI	YGGCCR	3 cut(s)	116, 174, 208
AfaI	GTAC	3 cut(s)	92, 317, 365
AflIII	ACRYGT	1 cut(s)	318
AgsI	TTSAA	1 cut(s)	358
AjnI	CCWGG	3 cut(s)	36, 171, 290
AluBI	AGCT	2 cut(s)	124, 268
AluI	AGCT	2 cut(s)	124, 268
Alw26I	GTCTC	1 cut(s)	365
AoxI	GGCC	5 cut(s)	18, 116, 174, 208, 253
ApeKI	GCWGC	2 cut(s)	121, 350
BalI	TGGCCA	1 cut(s)	176
BbsI	GAAGAC	1 cut(s)	147
BbvI	GCAGC	2 cut(s)	133, 362
BccI	CCATC	1 cut(s)	175
BceAI	ACGGC	2 cut(s)	212, 223
BciT130I	CCWGG	3 cut(s)	38, 173, 292
BcoDI	GTCTC	1 cut(s)	365
BisI	GCNGC	6 cut(s)	21, 119, 122, 279, 309, 351
BlsI	GCNGC	6 cut(s)	22, 120, 123, 280, 310, 352
BmcAI	AGTACT	1 cut(s)	92
Bme1390I	CCNGG	3 cut(s)	38, 173, 292
BmrFI	CCNGG	3 cut(s)	38, 173, 292
BmsI	GCATC	2 cut(s)	33, 165
BpiI	GAAGAC	1 cut(s)	147
BsaAI	YACGTR	1 cut(s)	319
BsaJI	CCNNGG	2 cut(s)	205, 291
BsaXI	ACNNNNNCTCC	4 cut(s)	203, 233, 305, 335
BseBI	CCWGG	3 cut(s)	38, 173, 292
BseDI	CCNNGG	2 cut(s)	205, 291
BseGI	GGATG	1 cut(s)	105
BseMII	CTCAG	2 cut(s)	63, 360
BseRI	GAGGAG	3 cut(s)	116, 200, 203
BseXI	GCAGC	2 cut(s)	133, 362
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	5 cut(s)	20, 118, 176, 210, 255
BsiEI	CGRYCG	1 cut(s)	154
BsmAI	GTCTC	1 cut(s)	365
BsnI	GGCC	5 cut(s)	20, 118, 176, 210, 255
Bsp1407I	TGTACA	1 cut(s)	363
BspACI	CCGC	7 cut(s)	21, 119, 235, 244, 279, 308, 311
BspANI	GGCC	5 cut(s)	20, 118, 176, 210, 255
BspCNI	CTCAG	2 cut(s)	64, 361
BspHI	TCATGA	2 cut(s)	270, 391
BspQI	GCTCTTC	1 cut(s)	332
BsrGI	TGTACA	1 cut(s)	363
BssECI	CCNNGG	2 cut(s)	205, 291
Bst2UI	CCWGG	3 cut(s)	38, 173, 292
Bst4CI	ACNGT	1 cut(s)	152
Bst6I	CTCTTC	1 cut(s)	332
BstAUI	TGTACA	1 cut(s)	363
BstBAI	YACGTR	1 cut(s)	319
BstC8I	GCNNGC	2 cut(s)	48, 52
BstDEI	CTNAG	2 cut(s)	72, 369
BstDSI	CCRYGG	1 cut(s)	205
BstF5I	GGATG	1 cut(s)	105
BstMAI	GTCTC	1 cut(s)	365
BstMCI	CGRYCG	1 cut(s)	154
BstMWI	GCNNNNNNNGC	5 cut(s)	47, 162, 243, 252, 287
BstNI	CCWGG	3 cut(s)	38, 173, 292
BstSCI	CCNGG	3 cut(s)	36, 171, 290
BstV1I	GCAGC	2 cut(s)	133, 362
BstV2I	GAAGAC	1 cut(s)	147
BsuRI	GGCC	5 cut(s)	20, 118, 176, 210, 255
BtgI	CCRYGG	1 cut(s)	205
BtgZI	GCGATG	1 cut(s)	56
BtsCI	GGATG	1 cut(s)	105
BtsIMutI	CAGTG	1 cut(s)	366
Cac8I	GCNNGC	2 cut(s)	48, 52
CciI	TCATGA	2 cut(s)	270, 391
Csp6I	GTAC	3 cut(s)	91, 316, 364
CviAII	CATG	4 cut(s)	114, 271, 329, 392
CviJI	RGCY	9 cut(s)	20, 50, 118, 124, 165, 176, 210, 255, 268
CviKI_1	RGCY	9 cut(s)	20, 50, 118, 124, 165, 176, 210, 255, 268
CviQI	GTAC	3 cut(s)	91, 316, 364
DdeI	CTNAG	2 cut(s)	72, 369
EaeI	YGGCCR	3 cut(s)	116, 174, 208
Eam1104I	CTCTTC	1 cut(s)	332
EarI	CTCTTC	1 cut(s)	332
EciI	GGCGGA	1 cut(s)	326
EcoRII	CCWGG	3 cut(s)	36, 171, 290
FaeI	CATG	4 cut(s)	117, 274, 332, 395
FaiI	YATR	6 cut(s)	11, 115, 272, 330, 384, 393
FatI	CATG	4 cut(s)	113, 270, 328, 391
Fnu4HI	GCNGC	6 cut(s)	21, 119, 122, 279, 309, 351
FokI	GGATG	1 cut(s)	92
Fsp4HI	GCNGC	6 cut(s)	21, 119, 122, 279, 309, 351
GluI	GCNGC	6 cut(s)	21, 119, 122, 279, 309, 351
HaeIII	GGCC	5 cut(s)	20, 118, 176, 210, 255
Hin1II	CATG	4 cut(s)	117, 274, 332, 395
HinfI	GANTC	1 cut(s)	388
Hpy166II	GTNNAC	1 cut(s)	366
Hpy188III	TCNNGA	2 cut(s)	271, 392
Hpy8I	GTNNAC	1 cut(s)	366
Hpy99I	CGWCG	2 cut(s)	137, 164
HpyAV	CCTTC	1 cut(s)	394
HpyCH4III	ACNGT	1 cut(s)	152
HpyCH4IV	ACGT	3 cut(s)	132, 168, 318
HpyCH4V	TGCA	3 cut(s)	9, 46, 54
HpyF10VI	GCNNNNNNNGC	5 cut(s)	47, 162, 243, 252, 287
HpyF3I	CTNAG	2 cut(s)	72, 369
HpySE526I	ACGT	3 cut(s)	132, 168, 318
Hsp92II	CATG	4 cut(s)	117, 274, 332, 395
LguI	GCTCTTC	1 cut(s)	332
LmnI	GCTCC	1 cut(s)	129
Lsp1109I	GCAGC	2 cut(s)	133, 362
LweI	GCATC	2 cut(s)	33, 165
MaeII	ACGT	3 cut(s)	132, 168, 318
MaeIII	GTNAC	1 cut(s)	194
MboII	GAAGA	2 cut(s)	152, 349
MlsI	TGGCCA	1 cut(s)	176
MluCI	AATT	1 cut(s)	358
MluNI	TGGCCA	1 cut(s)	176
Mox20I	TGGCCA	1 cut(s)	176
MscI	TGGCCA	1 cut(s)	176
Msp20I	TGGCCA	1 cut(s)	176
MspR9I	CCNGG	3 cut(s)	38, 173, 292
MvaI	CCWGG	3 cut(s)	38, 173, 292
MwoI	GCNNNNNNNGC	5 cut(s)	47, 162, 243, 252, 287
NlaIII	CATG	4 cut(s)	117, 274, 332, 395
NmeAIII	GCCGAG	1 cut(s)	231
PagI	TCATGA	2 cut(s)	270, 391
PciSI	GCTCTTC	1 cut(s)	332
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 165
PfeI	GAWTC	1 cut(s)	388
PkrI	GCNGC	6 cut(s)	22, 120, 123, 280, 310, 352
Ppu21I	YACGTR	1 cut(s)	319
Psp6I	CCWGG	3 cut(s)	36, 171, 290
PspGI	CCWGG	3 cut(s)	36, 171, 290
RsaI	GTAC	3 cut(s)	92, 317, 365
RsaNI	GTAC	3 cut(s)	91, 316, 364
SapI	GCTCTTC	1 cut(s)	332
SatI	GCNGC	6 cut(s)	21, 119, 122, 279, 309, 351
ScaI	AGTACT	1 cut(s)	92
ScrFI	CCNGG	3 cut(s)	38, 173, 292
SfaNI	GCATC	2 cut(s)	33, 165
Sse9I	AATT	1 cut(s)	358
SsiI	CCGC	7 cut(s)	21, 119, 235, 244, 279, 308, 311
StyD4I	CCNGG	3 cut(s)	36, 171, 290
TaaI	ACNGT	1 cut(s)	152
TaiI	ACGT	3 cut(s)	135, 171, 321
TaqI	TCGA	1 cut(s)	27
TasI	AATT	1 cut(s)	358
TatI	WGTACW	2 cut(s)	90, 363
TauI	GCSGC	4 cut(s)	23, 121, 281, 311
TfiI	GAWTC	1 cut(s)	388
TscAI	CASTG	1 cut(s)	373
TseI	GCWGC	2 cut(s)	121, 350
TspDTI	ATGAA	4 cut(s)	101, 287, 317, 380
TspRI	CASTG	1 cut(s)	373
ZrmI	AGTACT	1 cut(s)	92

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.