Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0011492

Physical Location & Seq

Genomic Coordinates Forward (+)

2401043 .. 2404403

Gene Structure 3361 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G024200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 642 bp

ATGGTGTGCATACGCAAGGCCACCATAGACGACCTCCTGGCCATGCAAGCCTGCAACCTCTTCTGCCTCCCAGAGAACTACCAGATGAAATACTACCTCTACCACATCCTCTCATGGCCTCAGCTCCTCTACGTCGCTGAAGACTACAACGGTCGCATCGTCGGCTACGTCCTAGCCAAGATGGAAGAGGAGAGCAACGAGTGCCATGGCCACATCACCTCTCTCGCCGTGCTCCGAACCCACCGCAAACTCGGTCTCGCCACTAAGCTCATGAGCGCGGCCCAGAACGCCATGGAACAGGTGTTTGCAGCTGAGTACGTCTCGCTTCATGTGAGGAAGAGCAATCGTGCGGCTTTCAACTTGTATACGGAGACTTTGGGGTATAAGATTCATGATGTTGAAGCTAAGTACTATGCCGATGGGGAAGATGCGTATGATATGAGGAAGGAGCTGAAGGGGAAGAAGGTACATGGACATAGTCATGGACATGGTCATGGGCATGGGCATGCGCACCATCATCACCATCATCACCATCATGAACATGGTGGTGGGTGTTGTTCGGGGGAGGCAGTGAAACCGGAAAAGACAGAGGCGAAAAAGGTGGAGAGAGGGAATGCGAAGGCGGAGGCAAGAGCGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004596 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006950 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010035 GO:0010154 GO:0010467 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017198 GO:0018002 GO:0018193 GO:0018200 GO:0018209 GO:0019538 GO:0022414 GO:0022626 GO:0030920 GO:0031248 GO:0031365 GO:0031414 GO:0031415 GO:0032501 GO:0032502 GO:0032991 GO:0034212 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051604 GO:0061458 GO:0071704 GO:1901564 GO:1901700 GO:1902493 GO:1902494 GO:1990189 GO:1990190 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

214

Amino Acids

24.06

Weight (kDa)

7.78

Isoelectric Point (pI)

30.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13780
fragaria_vesca	FvH4_7g01790
malus_domestica	MD02G1300400.v1.1 MD07G1016300.v1.1 MD07G1016800.v1.1 MD07G1023300.v1.1
prunus_persica	Prupe.2G024200_v2.0.a1 Prupe.2G024200_v2.0.a1
pyrus_communis	pycom07g01770
rosa_chinensis	RchiOBHm_Chr1g0318401
rosa_laevigata	RLG00000030541
rosa_multiflora	Rmu_sc0002662.1_g000015 Rmu_sc0003936.1_g000038
rosa_roxburghii	Rroxscaffold_4G00329270
rosa_rugosa	Rorug01G0021000
rosa_samantha	Rh1AG033100 Rh1BG028900 Rh1CG031400 Rh1DG038100
rosa_wichuraiana	Rw1G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	510
AccBSI	CCGCTC	1 cut(s)	635
AccI	GTMKAC	1 cut(s)	365
AccII	CGCG	1 cut(s)	278
AciI	CCGC	5 cut(s)	244, 278, 350, 623, 635
AcoI	YGGCCR	2 cut(s)	39, 208
AcuI	CTGAAG	2 cut(s)	159, 473
AfaI	GTAC	3 cut(s)	317, 410, 468
AgsI	TTSAA	2 cut(s)	358, 401
AjnI	CCWGG	1 cut(s)	36
AluBI	AGCT	5 cut(s)	124, 268, 311, 404, 451
AluI	AGCT	5 cut(s)	124, 268, 311, 404, 451
Alw21I	GWGCWC	1 cut(s)	234
Alw26I	GTCTC	3 cut(s)	260, 325, 365
AoxI	GGCC	5 cut(s)	18, 39, 116, 208, 279
ApeKI	GCWGC	1 cut(s)	308
AspLEI	GCGC	2 cut(s)	278, 511
AspS9I	GGNCC	1 cut(s)	280
AsuHPI	GGTGA	3 cut(s)	208, 512, 521
BalI	TGGCCA	2 cut(s)	41, 210
BbsI	GAAGAC	1 cut(s)	147
Bbv12I	GWGCWC	1 cut(s)	234
BbvCI	CCTCAGC	1 cut(s)	120
BbvI	GCAGC	1 cut(s)	320
BccI	CCATC	5 cut(s)	175, 413, 522, 531, 540
BceAI	ACGGC	1 cut(s)	212
BciT130I	CCWGG	1 cut(s)	38
BcoDI	GTCTC	3 cut(s)	260, 325, 365
BfaI	CTAG	1 cut(s)	173
BisI	GCNGC	3 cut(s)	279, 309, 351
BlsI	GCNGC	3 cut(s)	280, 310, 352
BmcAI	AGTACT	1 cut(s)	410
Bme1390I	CCNGG	1 cut(s)	38
BmgT120I	GGNCC	1 cut(s)	280
BmrFI	CCNGG	1 cut(s)	38
BmsI	GCATC	2 cut(s)	165, 418
BpiI	GAAGAC	1 cut(s)	147
BplI	GAGNNNNNCTC	2 cut(s)	305, 337
Bpu10I	CCTNAGC	1 cut(s)	120
BsaI	GGTCTC	1 cut(s)	260
BsaJI	CCNNGG	2 cut(s)	205, 291
BsaWI	WCCGGW	1 cut(s)	577
BseBI	CCWGG	1 cut(s)	38
BseDI	CCNNGG	2 cut(s)	205, 291
BseGI	GGATG	1 cut(s)	105
BseMII	CTCAG	2 cut(s)	134, 303
BseRI	GAGGAG	2 cut(s)	116, 203
BseXI	GCAGC	1 cut(s)	320
Bsh1236I	CGCG	1 cut(s)	278
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	5 cut(s)	20, 41, 118, 210, 281
BsiEI	CGRYCG	1 cut(s)	154
BsiHKAI	GWGCWC	1 cut(s)	234
BsiSI	CCGG	1 cut(s)	578
BsmAI	GTCTC	3 cut(s)	260, 325, 365
BsmBI	CGTCTC	1 cut(s)	325
BsmI	GAATGC	1 cut(s)	619
BsnI	GGCC	5 cut(s)	20, 41, 118, 210, 281
Bso31I	GGTCTC	1 cut(s)	260
Bsp1286I	GDGCHC	1 cut(s)	234
Bsp19I	CCATGG	2 cut(s)	205, 291
BspACI	CCGC	5 cut(s)	244, 278, 350, 623, 635
BspANI	GGCC	5 cut(s)	20, 41, 118, 210, 281
BspCNI	CTCAG	2 cut(s)	133, 304
BspFNI	CGCG	1 cut(s)	278
BspHI	TCATGA	3 cut(s)	270, 391, 535
BspQI	GCTCTTC	1 cut(s)	332
BspTNI	GGTCTC	1 cut(s)	260
BsrBI	CCGCTC	1 cut(s)	635
BssECI	CCNNGG	2 cut(s)	205, 291
BssNAI	GTATAC	1 cut(s)	366
BssT1I	CCWWGG	2 cut(s)	205, 291
Bst1107I	GTATAC	1 cut(s)	366
Bst2UI	CCWGG	1 cut(s)	38
Bst4CI	ACNGT	1 cut(s)	152
Bst6I	CTCTTC	3 cut(s)	65, 180, 332
BstAPI	GCANNNNNTGC	1 cut(s)	201
BstC8I	GCNNGC	3 cut(s)	48, 52, 507
BstDEI	CTNAG	4 cut(s)	120, 264, 312, 405
BstDSI	CCRYGG	2 cut(s)	205, 291
BstF5I	GGATG	1 cut(s)	105
BstFNI	CGCG	1 cut(s)	278
BstHHI	GCGC	2 cut(s)	278, 511
BstMAI	GTCTC	3 cut(s)	260, 325, 365
BstMCI	CGRYCG	1 cut(s)	154
BstMWI	GCNNNNNNNGC	4 cut(s)	47, 162, 201, 287
BstNI	CCWGG	1 cut(s)	38
BstNSI	RCATGY	1 cut(s)	509
BstSCI	CCNGG	1 cut(s)	36
BstUI	CGCG	1 cut(s)	278
BstV1I	GCAGC	1 cut(s)	320
BstV2I	GAAGAC	1 cut(s)	147
BstZ17I	GTATAC	1 cut(s)	366
BsuRI	GGCC	5 cut(s)	20, 41, 118, 210, 281
BtgI	CCRYGG	2 cut(s)	205, 291
BtsCI	GGATG	1 cut(s)	105
BtsI	GCAGTG	1 cut(s)	576
BtsIMutI	CAGTG	1 cut(s)	576
Cac8I	GCNNGC	3 cut(s)	48, 52, 507
CciI	TCATGA	3 cut(s)	270, 391, 535
CfoI	GCGC	2 cut(s)	278, 511
Cfr13I	GGNCC	1 cut(s)	280
Csp6I	GTAC	3 cut(s)	316, 409, 467
CviQI	GTAC	3 cut(s)	316, 409, 467
DdeI	CTNAG	4 cut(s)	120, 264, 312, 405
EaeI	YGGCCR	2 cut(s)	39, 208
Eam1104I	CTCTTC	3 cut(s)	65, 180, 332
EarI	CTCTTC	3 cut(s)	65, 180, 332
EciI	GGCGGA	1 cut(s)	638
Eco130I	CCWWGG	2 cut(s)	205, 291
Eco31I	GGTCTC	1 cut(s)	260
Eco57I	CTGAAG	2 cut(s)	159, 473
EcoRII	CCWGG	1 cut(s)	36
EcoT14I	CCWWGG	2 cut(s)	205, 291
ErhI	CCWWGG	2 cut(s)	205, 291
Esp3I	CGTCTC	1 cut(s)	325
FauI	CCCGC	1 cut(s)	628
FblI	GTMKAC	1 cut(s)	365
Fnu4HI	GCNGC	3 cut(s)	279, 309, 351
FokI	GGATG	1 cut(s)	92
Fsp4HI	GCNGC	3 cut(s)	279, 309, 351
FspAI	RTGCGCAY	1 cut(s)	510
FspBI	CTAG	1 cut(s)	173
FspI	TGCGCA	1 cut(s)	510
GlaI	GCGC	2 cut(s)	277, 510
GluI	GCNGC	3 cut(s)	279, 309, 351
HaeIII	GGCC	5 cut(s)	20, 41, 118, 210, 281
HapII	CCGG	1 cut(s)	578
HhaI	GCGC	2 cut(s)	278, 511
Hin6I	GCGC	2 cut(s)	276, 509
HinP1I	GCGC	2 cut(s)	276, 509
HinfI	GANTC	1 cut(s)	388
HpaII	CCGG	1 cut(s)	578
HphI	GGTGA	3 cut(s)	208, 512, 521
Hpy166II	GTNNAC	1 cut(s)	366
Hpy188I	TCNGA	1 cut(s)	236
Hpy188III	TCNNGA	3 cut(s)	271, 392, 536
Hpy8I	GTNNAC	1 cut(s)	366
Hpy99I	CGWCG	2 cut(s)	137, 164
HpyAV	CCTTC	4 cut(s)	439, 448, 457, 613
HpyCH4III	ACNGT	1 cut(s)	152
HpyCH4IV	ACGT	3 cut(s)	132, 168, 318
HpyCH4V	TGCA	4 cut(s)	9, 46, 54, 308
HpyF10VI	GCNNNNNNNGC	4 cut(s)	47, 162, 201, 287
HpyF3I	CTNAG	4 cut(s)	120, 264, 312, 405
HpySE526I	ACGT	3 cut(s)	132, 168, 318
HspAI	GCGC	2 cut(s)	276, 509
LguI	GCTCTTC	1 cut(s)	332
LmnI	GCTCC	3 cut(s)	129, 237, 448
LpnPI	CCDG	8 cut(s)	23, 50, 64, 84, 95, 284, 296, 591
Lsp1109I	GCAGC	1 cut(s)	320
LweI	GCATC	2 cut(s)	165, 418
MaeI	CTAG	1 cut(s)	173
MaeII	ACGT	3 cut(s)	132, 168, 318
MbiI	CCGCTC	1 cut(s)	635
MboII	GAAGA	6 cut(s)	52, 152, 197, 349, 437, 472
MhlI	GDGCHC	1 cut(s)	234
MlsI	TGGCCA	2 cut(s)	41, 210
MluNI	TGGCCA	2 cut(s)	41, 210
Mox20I	TGGCCA	2 cut(s)	41, 210
MscI	TGGCCA	2 cut(s)	41, 210
MslI	CAYNNNNRTG	8 cut(s)	480, 486, 492, 498, 504, 534, 540, 546
Msp20I	TGGCCA	2 cut(s)	41, 210
MspA1I	CMGCKG	1 cut(s)	311
MspI	CCGG	1 cut(s)	578
MspR9I	CCNGG	1 cut(s)	38
Mva1269I	GAATGC	1 cut(s)	619
MvaI	CCWGG	1 cut(s)	38
MvnI	CGCG	1 cut(s)	278
MwoI	GCNNNNNNNGC	4 cut(s)	47, 162, 201, 287
NcoI	CCATGG	2 cut(s)	205, 291
NsbI	TGCGCA	1 cut(s)	510
NspI	RCATGY	1 cut(s)	509
PaeI	GCATGC	1 cut(s)	509
PagI	TCATGA	3 cut(s)	270, 391, 535
PciSI	GCTCTTC	1 cut(s)	332
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 165
PctI	GAATGC	1 cut(s)	619
PfeI	GAWTC	1 cut(s)	388
PflFI	GACNNNGTC	2 cut(s)	477, 489
PkrI	GCNGC	3 cut(s)	280, 310, 352
Psp6I	CCWGG	1 cut(s)	36
PspGI	CCWGG	1 cut(s)	36
PspPI	GGNCC	1 cut(s)	280
PsyI	GACNNNGTC	2 cut(s)	477, 489
PvuII	CAGCTG	1 cut(s)	311
RsaI	GTAC	3 cut(s)	317, 410, 468
RsaNI	GTAC	3 cut(s)	316, 409, 467
RseI	CAYNNNNRTG	8 cut(s)	480, 486, 492, 498, 504, 534, 540, 546
SapI	GCTCTTC	1 cut(s)	332
SatI	GCNGC	3 cut(s)	279, 309, 351
Sau96I	GGNCC	1 cut(s)	280
ScaI	AGTACT	1 cut(s)	410
ScrFI	CCNGG	1 cut(s)	38
SduI	GDGCHC	1 cut(s)	234
SfaNI	GCATC	2 cut(s)	165, 418
SmiMI	CAYNNNNRTG	8 cut(s)	480, 486, 492, 498, 504, 534, 540, 546
SphI	GCATGC	1 cut(s)	509
SsiI	CCGC	5 cut(s)	244, 278, 350, 623, 635
SspMI	CTAG	1 cut(s)	173
StyD4I	CCNGG	1 cut(s)	36
StyI	CCWWGG	2 cut(s)	205, 291
TaaI	ACNGT	1 cut(s)	152
TaiI	ACGT	3 cut(s)	135, 171, 321
TaqII	GACCGA	1 cut(s)	242
TatI	WGTACW	1 cut(s)	408
TauI	GCSGC	2 cut(s)	281, 353
TfiI	GAWTC	1 cut(s)	388
TscAI	CASTG	1 cut(s)	576
TseI	GCWGC	1 cut(s)	308
TspDTI	ATGAA	4 cut(s)	101, 317, 380, 552
TspGWI	ACGGA	1 cut(s)	383
TspRI	CASTG	1 cut(s)	576
Tth111I	GACNNNGTC	2 cut(s)	477, 489
XceI	RCATGY	1 cut(s)	509
XcmI	CCANNNNNNNNNTGG	1 cut(s)	539
XmiI	GTMKAC	1 cut(s)	365
XspI	CTAG	1 cut(s)	173
ZrmI	AGTACT	1 cut(s)	410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.