Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0011492

Physical Location & Seq

Genomic Coordinates Forward (+)

1389759 .. 1391639

Gene Structure 1881 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g01770.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 630 bp

ATGGTGTGCATACGCAAGGCCACAATCGACGACCTCCTGGCGATGCAAGCTTGCAACCTTTTCTGCCTCCCTGAGAATTACCAGATGAAGTACTACCTCTATCACATCCTCTCATGGCCGCAGCTCCTCTACGTCGCTGAAGACTACAACGGTCGCATCGTCGGCTACGTCCTGGCCAAGATGGAGGAGGAGAGTAACGAGTGCCACGGCCACATCACCTCCCTCGCCGTTCTCCGCACCCACCGCAAACTCGGGCTCGCCACCAAGCTCATGAGCGCCGCCCAGAACGCCATGGAACAGGTGTTTGCGGCGGAGTACGTGTCGCTTCATGTGAGGAAGAGCAATCGAGCAGCGTTCAATTTGTACACTGAGACTTTGGGATATAAGATTCATGATGTGGAGGCGAAGTACTATGCCGATGGGGAAGATGCGTATGATATGAGGAAGGAGCTCAAGGGGAAGAAGGTGCATGGACATAGTCATGGGCATGTGCATGGGCATGGGCATGGGCATCACCACCATCATCACCATCATGAAGGTGGGTGTTGCTCAGGGGAGGCGGCGAAACCAGATAAGGCAGAGGCGAAAAAGGTCGAGAGAGGGAATGCCAAGGCTGTAGGGTTCCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004596 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006950 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010035 GO:0010154 GO:0010467 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017198 GO:0018002 GO:0018193 GO:0018200 GO:0018209 GO:0019538 GO:0022414 GO:0022626 GO:0030920 GO:0031248 GO:0031365 GO:0031414 GO:0031415 GO:0032501 GO:0032502 GO:0032991 GO:0034212 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051604 GO:0061458 GO:0071704 GO:1901564 GO:1901700 GO:1902493 GO:1902494 GO:1990189 GO:1990190 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

210

Amino Acids

23.66

Weight (kDa)

8.17

Isoelectric Point (pI)

28.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13780
fragaria_vesca	FvH4_7g01790
malus_domestica	MD02G1300400.v1.1 MD07G1016300.v1.1 MD07G1016800.v1.1 MD07G1023300.v1.1
prunus_persica	Prupe.2G024200_v2.0.a1 Prupe.2G024200_v2.0.a1
pyrus_communis	pycom07g01770
rosa_chinensis	RchiOBHm_Chr1g0318401
rosa_laevigata	RLG00000030541
rosa_multiflora	Rmu_sc0002662.1_g000015 Rmu_sc0003936.1_g000038
rosa_roxburghii	Rroxscaffold_4G00329270
rosa_rugosa	Rorug01G0021000
rosa_samantha	Rh1AG033100 Rh1BG028900 Rh1CG031400 Rh1DG038100
rosa_wichuraiana	Rw1G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	7 cut(s)	119, 235, 244, 279, 308, 311, 560
AcoI	YGGCCR	3 cut(s)	116, 174, 208
AcuI	CTGAAG	1 cut(s)	159
AfaI	GTAC	4 cut(s)	92, 317, 365, 410
AflIII	ACRYGT	1 cut(s)	318
AgsI	TTSAA	1 cut(s)	358
AjnI	CCWGG	2 cut(s)	36, 171
AluBI	AGCT	4 cut(s)	50, 124, 268, 451
AluI	AGCT	4 cut(s)	50, 124, 268, 451
Alw21I	GWGCWC	1 cut(s)	453
Alw26I	GTCTC	1 cut(s)	365
Ama87I	CYCGRG	1 cut(s)	251
AoxI	GGCC	4 cut(s)	18, 116, 174, 208
ApeKI	GCWGC	2 cut(s)	121, 350
AspLEI	GCGC	1 cut(s)	278
AsuHPI	GGTGA	3 cut(s)	208, 506, 518
AvaI	CYCGRG	1 cut(s)	251
BalI	TGGCCA	1 cut(s)	176
BanII	GRGCYC	2 cut(s)	258, 453
BbsI	GAAGAC	1 cut(s)	147
Bbv12I	GWGCWC	1 cut(s)	453
BbvI	GCAGC	2 cut(s)	133, 362
BccI	CCATC	4 cut(s)	175, 413, 528, 537
BceAI	ACGGC	2 cut(s)	212, 223
BciT130I	CCWGG	2 cut(s)	38, 173
BcoDI	GTCTC	1 cut(s)	365
BfmI	CTRYAG	1 cut(s)	615
BfoI	RGCGCY	1 cut(s)	279
BisI	GCNGC	6 cut(s)	119, 122, 279, 309, 351, 561
BlsI	GCNGC	6 cut(s)	120, 123, 280, 310, 352, 562
BmcAI	AGTACT	2 cut(s)	92, 410
Bme1390I	CCNGG	2 cut(s)	38, 173
BmeT110I	CYCGRG	1 cut(s)	251
BmiI	GGNNCC	1 cut(s)	623
BmrFI	CCNGG	2 cut(s)	38, 173
BmsI	GCATC	4 cut(s)	33, 165, 418, 520
BpiI	GAAGAC	1 cut(s)	147
Bpu10I	CCTNAGC	1 cut(s)	550
BpuEI	CTTGAG	1 cut(s)	437
BsaAI	YACGTR	1 cut(s)	319
BsaJI	CCNNGG	3 cut(s)	205, 291, 609
BsaXI	ACNNNNNCTCC	6 cut(s)	203, 233, 305, 335, 392, 422
BseBI	CCWGG	2 cut(s)	38, 173
BseDI	CCNNGG	3 cut(s)	205, 291, 609
BseGI	GGATG	1 cut(s)	105
BseMII	CTCAG	3 cut(s)	63, 360, 564
BseRI	GAGGAG	3 cut(s)	116, 200, 203
BseXI	GCAGC	2 cut(s)	133, 362
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	4 cut(s)	20, 118, 176, 210
BsiEI	CGRYCG	1 cut(s)	154
BsiHKAI	GWGCWC	1 cut(s)	453
BsiHKCI	CYCGRG	1 cut(s)	251
BsmAI	GTCTC	1 cut(s)	365
BsmI	GAATGC	1 cut(s)	610
BsnI	GGCC	4 cut(s)	20, 118, 176, 210
BsoBI	CYCGRG	1 cut(s)	251
Bsp1286I	GDGCHC	2 cut(s)	258, 453
Bsp1407I	TGTACA	1 cut(s)	363
Bsp19I	CCATGG	1 cut(s)	291
BspACI	CCGC	7 cut(s)	119, 235, 244, 279, 308, 311, 560
BspANI	GGCC	4 cut(s)	20, 118, 176, 210
BspCNI	CTCAG	3 cut(s)	64, 361, 563
BspHI	TCATGA	3 cut(s)	270, 391, 532
BspLI	GGNNCC	1 cut(s)	623
BspQI	GCTCTTC	1 cut(s)	332
BsrGI	TGTACA	1 cut(s)	363
BssECI	CCNNGG	3 cut(s)	205, 291, 609
BssT1I	CCWWGG	2 cut(s)	291, 609
Bst2UI	CCWGG	2 cut(s)	38, 173
Bst4CI	ACNGT	1 cut(s)	152
Bst6I	CTCTTC	1 cut(s)	332
BstAUI	TGTACA	1 cut(s)	363
BstBAI	YACGTR	1 cut(s)	319
BstC8I	GCNNGC	3 cut(s)	48, 52, 258
BstDEI	CTNAG	3 cut(s)	72, 369, 550
BstDSI	CCRYGG	2 cut(s)	205, 291
BstF5I	GGATG	1 cut(s)	105
BstH2I	RGCGCY	1 cut(s)	279
BstHHI	GCGC	1 cut(s)	278
BstMAI	GTCTC	1 cut(s)	365
BstMCI	CGRYCG	1 cut(s)	154
BstMWI	GCNNNNNNNGC	4 cut(s)	47, 162, 243, 287
BstNI	CCWGG	2 cut(s)	38, 173
BstNSI	RCATGY	1 cut(s)	491
BstSCI	CCNGG	2 cut(s)	36, 171
BstSFI	CTRYAG	1 cut(s)	615
BstV1I	GCAGC	2 cut(s)	133, 362
BstV2I	GAAGAC	1 cut(s)	147
BsuRI	GGCC	4 cut(s)	20, 118, 176, 210
BtgI	CCRYGG	2 cut(s)	205, 291
BtgZI	GCGATG	1 cut(s)	56
BtsCI	GGATG	1 cut(s)	105
BtsIMutI	CAGTG	1 cut(s)	366
Cac8I	GCNNGC	3 cut(s)	48, 52, 258
CciI	TCATGA	3 cut(s)	270, 391, 532
CfoI	GCGC	1 cut(s)	278
Csp6I	GTAC	4 cut(s)	91, 316, 364, 409
CviQI	GTAC	4 cut(s)	91, 316, 364, 409
DdeI	CTNAG	3 cut(s)	72, 369, 550
EaeI	YGGCCR	3 cut(s)	116, 174, 208
Eam1104I	CTCTTC	1 cut(s)	332
EarI	CTCTTC	1 cut(s)	332
EciI	GGCGGA	1 cut(s)	326
Ecl136II	GAGCTC	1 cut(s)	451
Eco130I	CCWWGG	2 cut(s)	291, 609
Eco24I	GRGCYC	2 cut(s)	258, 453
Eco53kI	GAGCTC	1 cut(s)	451
Eco57I	CTGAAG	1 cut(s)	159
Eco88I	CYCGRG	1 cut(s)	251
EcoICRI	GAGCTC	1 cut(s)	451
EcoRII	CCWGG	2 cut(s)	36, 171
EcoT14I	CCWWGG	2 cut(s)	291, 609
EcoT38I	GRGCYC	2 cut(s)	258, 453
ErhI	CCWWGG	2 cut(s)	291, 609
Fnu4HI	GCNGC	6 cut(s)	119, 122, 279, 309, 351, 561
FokI	GGATG	1 cut(s)	92
FriOI	GRGCYC	2 cut(s)	258, 453
Fsp4HI	GCNGC	6 cut(s)	119, 122, 279, 309, 351, 561
GlaI	GCGC	1 cut(s)	277
GluI	GCNGC	6 cut(s)	119, 122, 279, 309, 351, 561
HaeII	RGCGCY	1 cut(s)	279
HaeIII	GGCC	4 cut(s)	20, 118, 176, 210
HhaI	GCGC	1 cut(s)	278
Hin6I	GCGC	1 cut(s)	276
HinP1I	GCGC	1 cut(s)	276
HindIII	AAGCTT	1 cut(s)	48
HinfI	GANTC	1 cut(s)	388
HphI	GGTGA	3 cut(s)	208, 506, 518
Hpy166II	GTNNAC	1 cut(s)	366
Hpy188I	TCNGA	1 cut(s)	626
Hpy188III	TCNNGA	4 cut(s)	271, 392, 533, 595
Hpy8I	GTNNAC	1 cut(s)	366
Hpy99I	CGWCG	3 cut(s)	32, 137, 164
HpyAV	CCTTC	3 cut(s)	439, 457, 530
HpyCH4III	ACNGT	1 cut(s)	152
HpyCH4IV	ACGT	3 cut(s)	132, 168, 318
HpyCH4V	TGCA	5 cut(s)	9, 46, 54, 469, 493
HpyF10VI	GCNNNNNNNGC	4 cut(s)	47, 162, 243, 287
HpyF3I	CTNAG	3 cut(s)	72, 369, 550
HpySE526I	ACGT	3 cut(s)	132, 168, 318
HspAI	GCGC	1 cut(s)	276
LguI	GCTCTTC	1 cut(s)	332
LmnI	GCTCC	2 cut(s)	129, 448
Lsp1109I	GCAGC	2 cut(s)	133, 362
LweI	GCATC	4 cut(s)	33, 165, 418, 520
MaeII	ACGT	3 cut(s)	132, 168, 318
MaeIII	GTNAC	1 cut(s)	194
MboII	GAAGA	4 cut(s)	152, 349, 437, 472
MhlI	GDGCHC	2 cut(s)	258, 453
MlsI	TGGCCA	1 cut(s)	176
MluCI	AATT	2 cut(s)	76, 358
MluNI	TGGCCA	1 cut(s)	176
Mox20I	TGGCCA	1 cut(s)	176
MscI	TGGCCA	1 cut(s)	176
MslI	CAYNNNNRTG	7 cut(s)	480, 486, 492, 498, 504, 531, 537
Msp20I	TGGCCA	1 cut(s)	176
MspR9I	CCNGG	2 cut(s)	38, 173
Mva1269I	GAATGC	1 cut(s)	610
MvaI	CCWGG	2 cut(s)	38, 173
MwoI	GCNNNNNNNGC	4 cut(s)	47, 162, 243, 287
NcoI	CCATGG	1 cut(s)	291
NlaIV	GGNNCC	1 cut(s)	623
NspI	RCATGY	1 cut(s)	491
PagI	TCATGA	3 cut(s)	270, 391, 532
PciSI	GCTCTTC	1 cut(s)	332
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 165
PctI	GAATGC	1 cut(s)	610
PfeI	GAWTC	1 cut(s)	388
PflFI	GACNNNGTC	1 cut(s)	477
PkrI	GCNGC	6 cut(s)	120, 123, 280, 310, 352, 562
Ppu21I	YACGTR	1 cut(s)	319
Psp124BI	GAGCTC	1 cut(s)	453
Psp6I	CCWGG	2 cut(s)	36, 171
PspGI	CCWGG	2 cut(s)	36, 171
PspN4I	GGNNCC	1 cut(s)	623
PsyI	GACNNNGTC	1 cut(s)	477
RsaI	GTAC	4 cut(s)	92, 317, 365, 410
RsaNI	GTAC	4 cut(s)	91, 316, 364, 409
RseI	CAYNNNNRTG	7 cut(s)	480, 486, 492, 498, 504, 531, 537
SacI	GAGCTC	1 cut(s)	453
SapI	GCTCTTC	1 cut(s)	332
SatI	GCNGC	6 cut(s)	119, 122, 279, 309, 351, 561
ScaI	AGTACT	2 cut(s)	92, 410
ScrFI	CCNGG	2 cut(s)	38, 173
SduI	GDGCHC	2 cut(s)	258, 453
SfaNI	GCATC	4 cut(s)	33, 165, 418, 520
SfcI	CTRYAG	1 cut(s)	615
SmiMI	CAYNNNNRTG	7 cut(s)	480, 486, 492, 498, 504, 531, 537
SmlI	CTYRAG	1 cut(s)	452
SmoI	CTYRAG	1 cut(s)	452
Sse9I	AATT	2 cut(s)	76, 358
SsiI	CCGC	7 cut(s)	119, 235, 244, 279, 308, 311, 560
SstI	GAGCTC	1 cut(s)	453
StyD4I	CCNGG	2 cut(s)	36, 171
StyI	CCWWGG	2 cut(s)	291, 609
TaaI	ACNGT	1 cut(s)	152
TaiI	ACGT	3 cut(s)	135, 171, 321
TaqI	TCGA	3 cut(s)	27, 346, 594
TasI	AATT	2 cut(s)	76, 358
TatI	WGTACW	3 cut(s)	90, 363, 408
TauI	GCSGC	4 cut(s)	121, 281, 311, 563
TfiI	GAWTC	1 cut(s)	388
TscAI	CASTG	1 cut(s)	373
TseI	GCWGC	2 cut(s)	121, 350
TspDTI	ATGAA	4 cut(s)	101, 317, 380, 549
TspRI	CASTG	1 cut(s)	373
Tth111I	GACNNNGTC	1 cut(s)	477
XceI	RCATGY	1 cut(s)	491
XcmI	CCANNNNNNNNNTGG	1 cut(s)	536
ZrmI	AGTACT	2 cut(s)	92, 410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.