MD03G1016700.v1.1

Protein NRT1 PTR FAMILY 7.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0005709
Physical Location & Seq
Reverse (-)
1321170 .. 1324060
2891 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1016700.v1.1.491

Sequence Viewer

Length: 2022 bp
ATGACAAAAGGGTTTTTCGTGTTTTCTAGTTTTCCGGCAAATTATTTGAATTGGCCTACTACATTGCCGTTTGTAATTACCGACCCAAGCTCTTCCCCATCACCGGAGTCCGGCTCAACAATTTCAAGGGCAGTGATCAAGTTCCGTAAAAGGTTGATGATAAGCACGGCCACGAATCGAGACATAGAAGTAGCAGAAGTTGTGGATACAAACATCCATGAGGTAACTCAGGAATCCAAACCGAGTGTCGAAAAGAGTAGAGGAGGATGGAAGCTTGCACTTGTCTTGCTAGCGAATCAAGGCCTAGCAACACTAGCTTTCTTTGGTGTAGGAGTGAATTTGGTTTTGTTTCTGATCAGAGTTCTTGATCAACAAAGTGCCACTGCGGCAAACAACGTCAGCATATGGACTGGAACTGTTTATTTGTTCTCTCTTCTTGGAGCATTCCTCAGTGACTCCTATTGGGGTCGTTACTTAACATGCGCCATCTTTCAAGTCATCCTTGTGCTGGGCTTGGGGCTATTATCCTTGACGTCTTGGCTCTGGCTGATCCATCCGCATGGTTGTGGCGGTGTAGGCAATTACTGCCAACCAACATCCAAAGTTGGTGTTGTTCTCTTTTACCTATCAATATATCTAATAGCACTTGGATACGGTGGCCACCAACCAACTATTGCAACATTTGGAGCAGACCAATTCGACGAGAAAGATCCCAAACAACAATCTTCGAAAGCAGCTTTCTTTGCTTACTTCTACTTCGCACTCAACGTTGGATGTCTTTTCTCAAACACCATCTTGGTTTACTATGAGGATAAAGGTTTATGGACTATGGGGTTTCTGGTGTCATTAGGATCTGCTATTTTAGGCCTAGTGTCATATTTGGCAGCATCACCTAGGTATCGGTACATAAAAGCATGTGGCAACCCGTTGCCACGCGTGGCTCAGGTATTTGTGGCTGCTTTTAGAAAATTGAGAGTTGCTCCAGCCAGCCCGGATAATCTGTATGAGCTCGAAGGAACAAAATCTGCAATCAAAGGCAGTAGAAAAATTCTCCACAGTAATGAGATTATGTTTTTGGACAAGGCAGCGACAATAACAGAGAAGGATCAAACTGCGGCCGAAAAGAATCCATGGAGGCTGTGCACTGTAACTCAAGTTGAGGAAGCAAAATGCGTACTAAAAATGCTACCCGTTTGGCTTTGCACCATAATTTACTCAGTGGTGTTCACACAAATGGCTTCACTTTTTGTGGAGCAAGGTGATGTGATGGAATCCCACATCGGAAAATTTCACCTTCCAGCCGCCAGCATGTCTGCATTTGACATATGCAGTGTTCTTATCTGCACTGGACTATATCGCCAGTGCCTTGTGCCTTTAGCCGGACGGTTAAGTGGGAACCCAAAAGGCTTATCCGAGCTTCAAAGAATGGGAGTAGGGCTCATTATTGGATTGTTGGCAATGGTTGCGGCCGGTGCCACAGAAATTGCTAGGCTCAGAGGTGTGATACCTGGTGAGAAGATAAGCTCACTAAGCATATTTTGGCAAATCCCACAATATGTTCTTGTTGGTGCTTCAGAAGTTTTTATGTATGTGGGACAACTTGAGTTCTTCAATGGACAAGCGCCGGATGGGATTAAAAGCTTTGGAAGTTCACTATGCATGGCGTCAATATCTCTCGGAAACTATGTGAGCAGCTTACTGGTTAACATGGTAACACATTTTACAGCTAAAGGTGGAGACCCTGGTTGGATCCCAAATAATCTGAATGAAGGTCACATGGACAGATTCTACTTCCTCATTGCAATTCTAGCAGCTTTGGATTTTGTGGTTTATTTGTTTTGTGCTAAGTGGTACAAGGGCATCAACCTCCAAGGCTCTGAGCAGGAAATTGAGATCATGGAAAATCAGAAGGGCAATGGTCTCCAAGGTTATGAGCAGGAAACTCAGATAACGGAAACTCAACATGAAAGTTCATCAATTCATGGAAAACCACAAGATGAGTCAGTGCTCAACAAAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

674

Amino Acids

73.82

Weight (kDa)

7.13

Isoelectric Point (pI)

34.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTR2 PF00854 159 - 584 1.2e-87 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 536
AccB1I GGYRCC 1 cut(s) 1472
AccII CGCG 1 cut(s) 936
AciI CCGC 6 cut(s) 386, 557, 570, 1115, 1302, 1466
AclI AACGTT 1 cut(s) 768
AclWI GGATC 6 cut(s) 544, 704, 859, 1113, 1744, 1757
AcoI YGGCCR 4 cut(s) 168, 658, 1116, 1467
AcsI RAATTY 3 cut(s) 337, 1047, 1286
AcuI CTGAAG 1 cut(s) 1557
AcyI GRCGYC 2 cut(s) 533, 1664
AfaI GTAC 3 cut(s) 905, 1176, 1853
AfiI CCNNNNNNNGG 4 cut(s) 103, 110, 508, 1379
AflIII ACRYGT 1 cut(s) 934
AgsI TTSAA 5 cut(s) 49, 126, 494, 1421, 1612
AjnI CCWGG 2 cut(s) 1507, 1741
Alw21I GWGCWC 3 cut(s) 1011, 1145, 2010
Alw26I GTCTC 3 cut(s) 174, 1731, 1925
Alw44I GTGCAC 1 cut(s) 1141
AlwI GGATC 6 cut(s) 544, 704, 859, 1113, 1744, 1757
AoxI GGCC 7 cut(s) 53, 168, 301, 658, 865, 1116, 1467
ApaLI GTGCAC 1 cut(s) 1141
ApeKI GCWGC 6 cut(s) 734, 884, 956, 1085, 1692, 1811
ApoI RAATTY 3 cut(s) 337, 1047, 1286
ArsI GACNNNNNNTTYG 2 cut(s) 231, 263
AspA2I CCTAGG 1 cut(s) 893
AspLEI GCGC 2 cut(s) 485, 1624
AsuC2I CCSGG 1 cut(s) 992
AsuHPI GGTGA 5 cut(s) 93, 882, 1271, 1283, 1523
AsuII TTCGAA 1 cut(s) 728
AsuNHI GCTAGC 1 cut(s) 289
AvrII CCTAGG 1 cut(s) 893
BaeGI GKGCMC 1 cut(s) 1145
BaeI ACNNNNGTAYC 2 cut(s) 881, 914
BalI TGGCCA 1 cut(s) 660
BamHI GGATCC 1 cut(s) 1749
BanI GGYRCC 1 cut(s) 1472
BanII GRGCYC 2 cut(s) 1011, 1440
Bbv12I GWGCWC 3 cut(s) 1011, 1145, 2010
BbvI GCAGC 6 cut(s) 746, 896, 943, 1097, 1704, 1823
BccI CCATC 7 cut(s) 106, 261, 494, 561, 800, 1261, 1622
BceAI ACGGC 2 cut(s) 52, 183
BciT130I CCWGG 2 cut(s) 1509, 1743
BciVI GTATCC 2 cut(s) 199, 644
BclI TGATCA 3 cut(s) 135, 354, 367
BcnI CCSGG 1 cut(s) 992
BcoDI GTCTC 3 cut(s) 174, 1731, 1925
BfaI CTAG 8 cut(s) 27, 290, 305, 314, 869, 894, 1488, 1808
BfoI RGCGCY 1 cut(s) 1625
BfuI GTATCC 2 cut(s) 199, 644
BglI GCCNNNNNGGC 1 cut(s) 386
BlnI CCTAGG 1 cut(s) 893
Bme1390I CCNGG 3 cut(s) 992, 1509, 1743
BmiI GGNNCC 3 cut(s) 1397, 1474, 1751
BmrFI CCNGG 3 cut(s) 992, 1509, 1743
BmsI GCATC 2 cut(s) 896, 1869
BmtI GCTAGC 1 cut(s) 293
BplI GAGNNNNNCTC 8 cut(s) 98, 130, 432, 464, 964, 996, 1422, 1454
BpmI CTGGAG 1 cut(s) 966
Bpu10I CCTNAGC 1 cut(s) 942
Bpu14I TTCGAA 1 cut(s) 728
BpuEI CTTGAG 2 cut(s) 1137, 1622
BpuMI CCSGG 1 cut(s) 992
BsaHI GRCGYC 2 cut(s) 533, 1664
BsaI GGTCTC 2 cut(s) 1731, 1925
BsaJI CCNNGG 5 cut(s) 893, 1130, 1741, 1870, 1924
BsaWI WCCGGW 1 cut(s) 103
Bsc4I CCNNNNNNNGG 4 cut(s) 103, 110, 508, 1379
Bse118I RCCGGY 1 cut(s) 1469
Bse1I ACTGG 4 cut(s) 415, 1351, 1360, 1704
Bse3DI GCAATG 4 cut(s) 62, 1464, 1797, 1921
BseBI CCWGG 2 cut(s) 1509, 1743
BseDI CCNNGG 5 cut(s) 893, 1130, 1741, 1870, 1924
BseGI GGATG 7 cut(s) 213, 272, 498, 553, 596, 779, 1633
BseLI CCNNNNNNNGG 4 cut(s) 103, 110, 508, 1379
BseMI GCAATG 4 cut(s) 62, 1464, 1797, 1921
BseMII CTCAG 7 cut(s) 242, 463, 956, 1230, 1507, 1869, 1958
BseNI ACTGG 4 cut(s) 415, 1351, 1360, 1704
BseRI GAGGAG 1 cut(s) 276
BseSI GKGCMC 1 cut(s) 1145
BseX3I CGGCCG 2 cut(s) 1116, 1467
BseXI GCAGC 6 cut(s) 746, 896, 943, 1097, 1704, 1823
BseYI CCCAGC 1 cut(s) 508
BsgI GTGCAG 1 cut(s) 1327
Bsh1236I CGCG 1 cut(s) 936
Bsh1285I CGRYCG 2 cut(s) 1119, 1470
BshFI GGCC 7 cut(s) 55, 170, 303, 660, 867, 1118, 1469
BshNI GGYRCC 1 cut(s) 1472
BsiEI CGRYCG 2 cut(s) 1119, 1470
BsiHKAI GWGCWC 3 cut(s) 1011, 1145, 2010
BsiSI CCGG 7 cut(s) 35, 104, 111, 992, 1380, 1470, 1625
BslFI GGGAC 1 cut(s) 1608
BslI CCNNNNNNNGG 4 cut(s) 103, 110, 508, 1379
BsmAI GTCTC 3 cut(s) 174, 1731, 1925
BsmFI GGGAC 1 cut(s) 1608
BsmI GAATGC 1 cut(s) 443
BsnI GGCC 7 cut(s) 55, 170, 303, 660, 867, 1118, 1469
Bso31I GGTCTC 2 cut(s) 1731, 1925
Bsp119I TTCGAA 1 cut(s) 728
Bsp1286I GDGCHC 4 cut(s) 1011, 1145, 1440, 2010
Bsp143I GATC 9 cut(s) 135, 354, 367, 549, 709, 851, 1105, 1749, 1893
Bsp19I CCATGG 1 cut(s) 1130
BspACI CCGC 6 cut(s) 386, 557, 570, 1115, 1302, 1466
BspANI GGCC 7 cut(s) 55, 170, 303, 660, 867, 1118, 1469
BspCNI CTCAG 7 cut(s) 241, 462, 955, 1229, 1506, 1870, 1957
BspFNI CGCG 1 cut(s) 936
BspLI GGNNCC 3 cut(s) 1397, 1474, 1751
BspOI GCTAGC 1 cut(s) 293
BspPI GGATC 6 cut(s) 544, 704, 859, 1113, 1744, 1757
BspQI GCTCTTC 1 cut(s) 97
BspT104I TTCGAA 1 cut(s) 728
BspT107I GGYRCC 1 cut(s) 1472
BspTNI GGTCTC 2 cut(s) 1731, 1925
BsrDI GCAATG 4 cut(s) 62, 1464, 1797, 1921
BsrFI RCCGGY 1 cut(s) 1469
BsrI ACTGG 4 cut(s) 415, 1351, 1360, 1704
BssAI RCCGGY 1 cut(s) 1469
BssECI CCNNGG 5 cut(s) 893, 1130, 1741, 1870, 1924
BssMI GATC 9 cut(s) 135, 354, 367, 549, 709, 851, 1105, 1749, 1893
BssNI GRCGYC 2 cut(s) 533, 1664
BssT1I CCWWGG 4 cut(s) 893, 1130, 1870, 1924
Bst2UI CCWGG 2 cut(s) 1509, 1743
Bst4CI ACNGT 5 cut(s) 418, 656, 1058, 1147, 1386
Bst6I CTCTTC 2 cut(s) 97, 438
BstACI GRCGYC 2 cut(s) 533, 1664
BstAPI GCANNNNNTGC 2 cut(s) 585, 1463
BstBI TTCGAA 1 cut(s) 728
BstC8I GCNNGC 4 cut(s) 276, 291, 988, 1306
BstDEI CTNAG 9 cut(s) 228, 449, 942, 1216, 1493, 1529, 1845, 1878, 1944
BstDSI CCRYGG 1 cut(s) 1130
BstF5I GGATG 7 cut(s) 213, 272, 498, 553, 596, 779, 1633
BstFNI CGCG 1 cut(s) 936
BstH2I RGCGCY 1 cut(s) 1625
BstHHI GCGC 2 cut(s) 485, 1624
BstKTI GATC 9 cut(s) 138, 357, 370, 552, 712, 854, 1108, 1752, 1896
BstMAI GTCTC 3 cut(s) 174, 1731, 1925
BstMBI GATC 9 cut(s) 135, 354, 367, 549, 709, 851, 1105, 1749, 1893
BstMCI CGRYCG 2 cut(s) 1119, 1470
BstMWI GCNNNNNNNGC 9 cut(s) 314, 386, 576, 585, 743, 1463, 1472, 1530, 1808
BstNI CCWGG 2 cut(s) 1509, 1743
BstNSI RCATGY 3 cut(s) 483, 918, 1312
BstSCI CCNGG 3 cut(s) 990, 1507, 1741
BstSLI GKGCMC 1 cut(s) 1145
BstUI CGCG 1 cut(s) 936
BstV1I GCAGC 6 cut(s) 746, 896, 943, 1097, 1704, 1823
BstX2I RGATCY 3 cut(s) 709, 851, 1749
BstXI CCANNNNNNTGG 1 cut(s) 560
BstYI RGATCY 3 cut(s) 709, 851, 1749
BstZI CGGCCG 2 cut(s) 1116, 1467
BsuI GTATCC 2 cut(s) 199, 644
BsuRI GGCC 7 cut(s) 55, 170, 303, 660, 867, 1118, 1469
BtgI CCRYGG 1 cut(s) 1130
BtsCI GGATG 7 cut(s) 213, 272, 498, 553, 596, 779, 1633
BtsI GCAGTG 3 cut(s) 138, 381, 1336
BtsIMutI CAGTG 9 cut(s) 138, 381, 457, 1143, 1224, 1336, 1344, 1367, 2010
Cac8I GCNNGC 4 cut(s) 276, 291, 988, 1306
CfoI GCGC 2 cut(s) 485, 1624
Cfr10I RCCGGY 1 cut(s) 1469
CseI GACGC 1 cut(s) 1653
CsiI ACCWGGT 1 cut(s) 1507
Csp6I GTAC 3 cut(s) 904, 1175, 1852
CspCI CAANNNNNGTGG 2 cut(s) 1465, 1500
CviQI GTAC 3 cut(s) 904, 1175, 1852
DdeI CTNAG 9 cut(s) 228, 449, 942, 1216, 1493, 1529, 1845, 1878, 1944
DpnI GATC 9 cut(s) 137, 356, 369, 551, 711, 853, 1107, 1751, 1895
DpnII GATC 9 cut(s) 135, 354, 367, 549, 709, 851, 1105, 1749, 1893
EaeI YGGCCR 4 cut(s) 168, 658, 1116, 1467
EagI CGGCCG 2 cut(s) 1116, 1467
Eam1104I CTCTTC 2 cut(s) 97, 438
EarI CTCTTC 2 cut(s) 97, 438
Ecl136II GAGCTC 1 cut(s) 1009
EclXI CGGCCG 2 cut(s) 1116, 1467
Eco130I CCWWGG 4 cut(s) 893, 1130, 1870, 1924
Eco147I AGGCCT 2 cut(s) 303, 867
Eco24I GRGCYC 2 cut(s) 1011, 1440
Eco31I GGTCTC 2 cut(s) 1731, 1925
Eco52I CGGCCG 2 cut(s) 1116, 1467
Eco53kI GAGCTC 1 cut(s) 1009
Eco57I CTGAAG 1 cut(s) 1557
EcoICRI GAGCTC 1 cut(s) 1009
EcoRII CCWGG 2 cut(s) 1507, 1741
EcoT14I CCWWGG 4 cut(s) 893, 1130, 1870, 1924
EcoT22I ATGCAT 1 cut(s) 1661
EcoT38I GRGCYC 2 cut(s) 1011, 1440
ErhI CCWWGG 4 cut(s) 893, 1130, 1870, 1924
FalI AAGNNNNNCTT 2 cut(s) 486, 518
FaqI GGGAC 1 cut(s) 1608
FauNDI CATATG 2 cut(s) 404, 1325
FbaI TGATCA 3 cut(s) 135, 354, 367
FokI GGATG 7 cut(s) 200, 279, 485, 540, 583, 786, 1640
FriOI GRGCYC 2 cut(s) 1011, 1440
FspBI CTAG 8 cut(s) 27, 290, 305, 314, 869, 894, 1488, 1808
GlaI GCGC 2 cut(s) 484, 1623
GsaI CCCAGC 1 cut(s) 512
GsuI CTGGAG 1 cut(s) 966
HaeII RGCGCY 1 cut(s) 1625
HaeIII GGCC 7 cut(s) 55, 170, 303, 660, 867, 1118, 1469
HapII CCGG 7 cut(s) 35, 104, 111, 992, 1380, 1470, 1625
HgaI GACGC 1 cut(s) 1653
HhaI GCGC 2 cut(s) 485, 1624
Hin1I GRCGYC 2 cut(s) 533, 1664
Hin6I GCGC 2 cut(s) 483, 1622
HinP1I GCGC 2 cut(s) 483, 1622
HincII GTYRAC 1 cut(s) 1705
HindII GTYRAC 1 cut(s) 1705
HindIII AAGCTT 2 cut(s) 272, 1639
HinfI GANTC 9 cut(s) 107, 175, 233, 295, 455, 1126, 1271, 1785, 2000
HpaI GTTAAC 1 cut(s) 1705
HpaII CCGG 7 cut(s) 35, 104, 111, 992, 1380, 1470, 1625
HphI GGTGA 5 cut(s) 93, 882, 1271, 1283, 1523
Hpy166II GTNNAC 5 cut(s) 802, 1143, 1227, 1652, 1705
Hpy188III TCNNGA 3 cut(s) 179, 230, 365
Hpy8I GTNNAC 5 cut(s) 802, 1143, 1227, 1652, 1705
Hpy99I CGWCG 1 cut(s) 704
HpyAV CCTTC 5 cut(s) 1007, 1096, 1304, 1763, 1903
HpyCH4III ACNGT 5 cut(s) 418, 656, 1058, 1147, 1386
HpyCH4IV ACGT 3 cut(s) 396, 533, 768
HpyF10VI GCNNNNNNNGC 9 cut(s) 314, 386, 576, 585, 743, 1463, 1472, 1530, 1808
HpyF3I CTNAG 9 cut(s) 228, 449, 942, 1216, 1493, 1529, 1845, 1878, 1944
HpySE526I ACGT 3 cut(s) 396, 533, 768
Hsp92I GRCGYC 2 cut(s) 533, 1664
HspAI GCGC 2 cut(s) 483, 1622
Ksp22I TGATCA 3 cut(s) 135, 354, 367
KspAI GTTAAC 1 cut(s) 1705
Kzo9I GATC 9 cut(s) 135, 354, 367, 549, 709, 851, 1105, 1749, 1893
LguI GCTCTTC 1 cut(s) 97
LmnI GCTCC 4 cut(s) 440, 686, 985, 1252
Lsp1109I GCAGC 6 cut(s) 746, 896, 943, 1097, 1704, 1823
LweI GCATC 2 cut(s) 896, 1869
MabI ACCWGGT 1 cut(s) 1507
MaeI CTAG 8 cut(s) 27, 290, 305, 314, 869, 894, 1488, 1808
MaeII ACGT 3 cut(s) 396, 533, 768
MaeIII GTNAC 6 cut(s) 223, 452, 470, 1147, 1711, 1772
MalI GATC 9 cut(s) 137, 356, 369, 551, 711, 853, 1107, 1751, 1895
MboI GATC 9 cut(s) 135, 354, 367, 549, 709, 851, 1105, 1749, 1893
MboII GAAGA 5 cut(s) 84, 425, 717, 1528, 1600
MflI RGATCY 3 cut(s) 709, 851, 1749
MhlI GDGCHC 4 cut(s) 1011, 1145, 1440, 2010
MlsI TGGCCA 1 cut(s) 660
MluI ACGCGT 1 cut(s) 934
MluNI TGGCCA 1 cut(s) 660
MlyI GAGTC 3 cut(s) 116, 449, 2009
MmeI TCCRAC 2 cut(s) 751, 1727
Mox20I TGGCCA 1 cut(s) 660
Mph1103I ATGCAT 1 cut(s) 1661
MscI TGGCCA 1 cut(s) 660
MseI TTAA 4 cut(s) 476, 1388, 1635, 1704
MslI CAYNNNNRTG 5 cut(s) 503, 558, 564, 1059, 1232
Msp20I TGGCCA 1 cut(s) 660
MspI CCGG 7 cut(s) 35, 104, 111, 992, 1380, 1470, 1625
MspR9I CCNGG 3 cut(s) 992, 1509, 1743
Mva1269I GAATGC 1 cut(s) 443
MvaI CCWGG 2 cut(s) 1509, 1743
MvnI CGCG 1 cut(s) 936
MwoI GCNNNNNNNGC 9 cut(s) 314, 386, 576, 585, 743, 1463, 1472, 1530, 1808
NciI CCSGG 1 cut(s) 992
NcoI CCATGG 1 cut(s) 1130
NdeI CATATG 2 cut(s) 404, 1325
NdeII GATC 9 cut(s) 135, 354, 367, 549, 709, 851, 1105, 1749, 1893
NheI GCTAGC 1 cut(s) 289
NlaIV GGNNCC 3 cut(s) 1397, 1474, 1751
NmuCI GTSAC 2 cut(s) 452, 1772
NsiI ATGCAT 1 cut(s) 1661
NspI RCATGY 3 cut(s) 483, 918, 1312
NspV TTCGAA 1 cut(s) 728
PceI AGGCCT 2 cut(s) 303, 867
PciSI GCTCTTC 1 cut(s) 97
PcsI WCGNNNNNNNCGW 1 cut(s) 765
PctI GAATGC 1 cut(s) 443
PfeI GAWTC 6 cut(s) 175, 233, 295, 1126, 1271, 1785
PleI GAGTC 3 cut(s) 115, 449, 2008
PpsI GAGTC 3 cut(s) 115, 449, 2008
Psp124BI GAGCTC 1 cut(s) 1011
Psp1406I AACGTT 1 cut(s) 768
Psp6I CCWGG 2 cut(s) 1507, 1741
PspFI CCCAGC 1 cut(s) 508
PspGI CCWGG 2 cut(s) 1507, 1741
PspN4I GGNNCC 3 cut(s) 1397, 1474, 1751
PsuI RGATCY 3 cut(s) 709, 851, 1749
RsaI GTAC 3 cut(s) 905, 1176, 1853
RsaNI GTAC 3 cut(s) 904, 1175, 1852
RseI CAYNNNNRTG 5 cut(s) 503, 558, 564, 1059, 1232
SacI GAGCTC 1 cut(s) 1011
SapI GCTCTTC 1 cut(s) 97
SaqAI TTAA 4 cut(s) 476, 1388, 1635, 1704
Sau3AI GATC 9 cut(s) 135, 354, 367, 549, 709, 851, 1105, 1749, 1893
SchI GAGTC 3 cut(s) 116, 449, 2009
ScrFI CCNGG 3 cut(s) 992, 1509, 1743
SduI GDGCHC 4 cut(s) 1011, 1145, 1440, 2010
SexAI ACCWGGT 1 cut(s) 1507
SfaNI GCATC 2 cut(s) 896, 1869
SfuI TTCGAA 1 cut(s) 728
SmiMI CAYNNNNRTG 5 cut(s) 503, 558, 564, 1059, 1232
SmlI CTYRAG 2 cut(s) 1152, 1601
SmoI CTYRAG 2 cut(s) 1152, 1601
SseBI AGGCCT 2 cut(s) 303, 867
SsiI CCGC 6 cut(s) 386, 557, 570, 1115, 1302, 1466
SspMI CTAG 8 cut(s) 27, 290, 305, 314, 869, 894, 1488, 1808
SstI GAGCTC 1 cut(s) 1011
StuI AGGCCT 2 cut(s) 303, 867
StyD4I CCNGG 3 cut(s) 990, 1507, 1741
StyI CCWWGG 4 cut(s) 893, 1130, 1870, 1924
TaaI ACNGT 5 cut(s) 418, 656, 1058, 1147, 1386
TaiI ACGT 3 cut(s) 399, 536, 771
TaqI TCGA 5 cut(s) 178, 249, 699, 728, 1011
TauI GCSGC 4 cut(s) 389, 1118, 1304, 1469
TfiI GAWTC 6 cut(s) 175, 233, 295, 1126, 1271, 1785
Tru1I TTAA 4 cut(s) 476, 1388, 1635, 1704
Tru9I TTAA 4 cut(s) 476, 1388, 1635, 1704
TscAI CASTG 9 cut(s) 138, 388, 457, 1150, 1224, 1336, 1351, 1367, 2010
TseFI GTSAC 2 cut(s) 452, 1772
TseI GCWGC 6 cut(s) 734, 884, 956, 1085, 1692, 1811
Tsp45I GTSAC 2 cut(s) 452, 1772
TspDTI ATGAA 4 cut(s) 1782, 1962, 1970, 1980
TspGWI ACGGA 2 cut(s) 134, 1967
TspRI CASTG 9 cut(s) 138, 388, 457, 1150, 1224, 1336, 1351, 1367, 2010
VneI GTGCAC 1 cut(s) 1141
XapI RAATTY 3 cut(s) 337, 1047, 1286
XceI RCATGY 3 cut(s) 483, 918, 1312
XmaJI CCTAGG 1 cut(s) 893
XspI CTAG 8 cut(s) 27, 290, 305, 314, 869, 894, 1488, 1808
ZraI GACGTC 1 cut(s) 534
Zsp2I ATGCAT 1 cut(s) 1661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.