Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0015587

Physical Location & Seq

Genomic Coordinates Forward (+)

3363976 .. 3365775

Gene Structure 1800 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1043000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGATATCGAACACCAAGAGACTAGGTTTCCACCACTAACTGCCAGCGATCAAGAGCGAAAGCCCGCAAAGATACTGAGCCGCGAAGAGATGGAGAGCAACAATGAAGGCATGTTTGTGAAGCTCAAGGTTGCAAAGCCGGAACCTTTAGGCCAAAACCCTCAAAACTTTTCTGCTGCTCCGCTGCCGGAATTTACCCGATTTTGCGAGGTCTGCTTCAAGGGTTTCAGCTCAGGTAAGGCTCTCGGAGGCCACAAAAGAATGCATGTTCAAGCTAACAGGGAATTGTTTAATCAGTCTCGCAAGAACACGATTTCATCAAAACCCAACAATTCGAAACCAAGCAATTCCAATGTTGGAAGCTCGAATGCTGGTGGGGTTTTGGGGATTGGAGGAAATAGCAGCACCATCAGCAATATGAAGCCTGTTTGTTGCGTTTGCGGCAAGAATTTTCCGTCGATGAAGTCACTTTTTGGGCATATGAGGTCGCATCCAGAGAGAGAGTGGAGGGGAATTCAGCCGCCCCCGACCGCCAAAAACAGCTCTTCTTCCACTGTGTCAGATGCTGTGCCTGATCAGAGTAATAGGAAAGCTCAGGAGGATCAGATTGAGTCTGATGAGACTTTTTTCAGGTCGAAAAGTTCGGTTCTTAATCTGTCCAAGACTCTGCCTAAATGGTCACAAACCGCAAGGAGAGGGAGGAAGAGCGGCAGCACGGGATTTGAGTCCAACTCTGACCAGTCCGTCTCCGGATTGGATTCGAGAAGTCCCAGGACTGTTGAAGAGGACGAAGAGCAGATGGAGGAAGCTGTCCATGATCTTTTGATGCTAGCTCAGGCCAATCCATTGGAAGGAGGAGGAGCTGATGAGACCATGTATGAGGTCACCAACAGCAATTTCTTGATCACCACCAATCAGGACCGAGAGGGTGGACTTCCATACCACGGACACACTGCACCCTCCACCGTGGGGTCCACAAACAAGAGGAAGGGAGCATCATCTGAGGTGAAGAGGAGTGAGAAAAAATGGTATGATGCATATGGTGGTGGGTTTGGTCAAGAAAAGTCAACGGTGAAGAATTTCTTGAAGCTTGGATTAATGGAGGAGGAAAATATTGGAAACTATAATAATATGGAGGATGAATTGTCAGACAGTCAGAATTCTGAGAGCATTGCGGTGGTGAGGAGGAAGAGGAGGAAGATGAAGTTGGTGGACTTGGAAGGAAGGCTGAGGTACAAGTGCAATCTCTGTGCGAAGTGTTTCCCGAGCCACCAAGCTCTGGGAGGACACATGTCAAGCCACAACAAGCTCAAGGGGATCACGGTGGCCCACTCATCAATGGAGGACCAGTCTGCATCCGCTGACGATCCGGCTGCTGAAGATAGGGTGCATGGTGATGAAGCAGAAAGAGTAGCACTTGATCATCTGCAGCATCACCAATGCAAAATCTGTAACAAGACCTTCCCAACAGGTCAGGCTTTGGGGGGTCACAAGAGGTGCCACTGGACTGGCCCCACTGAGCAGCAGCAGCAGCAGGTGGTGGTGGTGGGTCCTTCTGAGCAGCTACAGAAGCAGGTGGTGGTCGTGGGTCCTTCTGAGCAGCTACAGAAGCAGCTGCAAGCTCATTCCAGTCAGACTATAGTAGGTGGTCGTGGTGGAGGAAAAGTTTTGAACTTTGACCTAAATGAGCTTCCACCAATGGAGGAGGATAACCAGGAAGGTGCAGGTACAGATTATCAGTATGGTGGGGCAGCAGCAGCAGGATGTTCAACTTCTTCTTATAATTCAGTTACTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0055046 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2_6

Protein Analysis

600

Amino Acids

65.53

Weight (kDa)

6.84

Isoelectric Point (pI)

53.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C2H2_6	PF13912	144 - 166	2.2e-06	C2H2-type zinc finger
zf-C2H2_6	PF13912	411 - 436	3.1e-06	C2H2-type zinc finger
zf-C2H2_6	PF13912	478 - 502	3e-11	C2H2-type zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015587)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g41600
malus_domestica	MD03G1043000.v1.1 MD11G1046000.v1.1
prunus_persica	Prupe.6G035400_v2.0.a1
pyrus_communis	pycom03g03320 pycom11g03730
rosa_chinensis	RchiOBHm_Chr5g0074621
rosa_laevigata	RLG00000036491
rosa_multiflora	Rmu_sc0001104.1_g000006 Rmu_sc0019989.1_g000001
rosa_roxburghii	Rroxscaffold_1G00006960
rosa_rugosa	Rorug05G0433300
rosa_samantha	Rh5AG490400 Rh5BG511300 Rh5CG535000 Rh5DG523800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1782
AarI	CACCTGC	2 cut(s)	1525, 1564
AasI	GACNNNNNNGTC	1 cut(s)	743
Acc36I	ACCTGC	3 cut(s)	1525, 1564, 1715
AccB1I	GGYRCC	1 cut(s)	1497
AccB7I	CCANNNNNTGG	1 cut(s)	1279
AccBSI	CCGCTC	1 cut(s)	708
AccII	CGCG	1 cut(s)	84
AccIII	TCCGGA	1 cut(s)	749
AclWI	GGATC	3 cut(s)	609, 1325, 1361
AcsI	RAATTY	5 cut(s)	191, 448, 513, 1078, 1159
AcuI	CTGAAG	1 cut(s)	1398
AfaI	GTAC	2 cut(s)	1235, 1729
AfiI	CCNNNNNNNGG	4 cut(s)	851, 944, 969, 1279
AflIII	ACRYGT	1 cut(s)	1290
AgsI	TTSAA	6 cut(s)	220, 272, 782, 1087, 1672, 1770
AjnI	CCWGG	2 cut(s)	770, 1713
AjuI	GAANNNNNNNTTGG	4 cut(s)	881, 913, 1190, 1222
Alw26I	GTCTC	5 cut(s)	14, 303, 614, 751, 863
AlwI	GGATC	3 cut(s)	609, 1325, 1361
AlwNI	CAGNNNCTG	1 cut(s)	566
Ama87I	CYCGRG	1 cut(s)	1264
Aor13HI	TCCGGA	1 cut(s)	749
AoxI	GGCC	5 cut(s)	151, 250, 837, 1326, 1510
ApoI	RAATTY	5 cut(s)	191, 448, 513, 1078, 1159
AseI	ATTAAT	1 cut(s)	1097
Asp700I	GAANNNNTTC	2 cut(s)	1079, 1259
AspS9I	GGNCC	7 cut(s)	919, 972, 1327, 1345, 1511, 1550, 1589
AsuHPI	GGTGA	7 cut(s)	877, 898, 1018, 1084, 1192, 1406, 1427
AsuII	TTCGAA	1 cut(s)	335
AsuNHI	GCTAGC	1 cut(s)	829
AvaI	CYCGRG	1 cut(s)	1264
AvaII	GGWCC	5 cut(s)	919, 972, 1345, 1550, 1589
BanI	GGYRCC	1 cut(s)	1497
BbvCI	CCTCAGC	1 cut(s)	1229
BccI	CCATC	3 cut(s)	85, 416, 793
BcgI	CGANNNNNNTGC	2 cut(s)	1355, 1389
BciT130I	CCWGG	2 cut(s)	772, 1715
BclI	TGATCA	3 cut(s)	574, 903, 1420
BcoDI	GTCTC	5 cut(s)	14, 303, 614, 751, 863
BfaI	CTAG	2 cut(s)	24, 830
BfmI	CTRYAG	4 cut(s)	1427, 1565, 1604, 1638
BfuAI	ACCTGC	3 cut(s)	1525, 1564, 1715
Bme1390I	CCNGG	2 cut(s)	772, 1715
Bme18I	GGWCC	5 cut(s)	919, 972, 1345, 1550, 1589
BmeT110I	CYCGRG	1 cut(s)	1264
BmgT120I	GGNCC	7 cut(s)	919, 972, 1327, 1345, 1511, 1550, 1589
BmiI	GGNNCC	6 cut(s)	144, 973, 1499, 1513, 1551, 1590
BmrFI	CCNGG	2 cut(s)	772, 1715
BmsI	GCATC	7 cut(s)	499, 553, 816, 1004, 1024, 1364, 1441
BmtI	GCTAGC	1 cut(s)	833
BoxI	GACNNNNGTC	1 cut(s)	1291
BplI	GAGNNNNNCTC	2 cut(s)	716, 748
Bpu10I	CCTNAGC	4 cut(s)	232, 594, 834, 1229
Bpu14I	TTCGAA	1 cut(s)	335
BpuEI	CTTGAG	2 cut(s)	110, 1295
BsaI	GGTCTC	1 cut(s)	863
BsaJI	CCNNGG	3 cut(s)	770, 943, 966
BsaWI	WCCGGW	1 cut(s)	749
BsaXI	ACNNNNNCTCC	4 cut(s)	1334, 1364, 1650, 1680
Bsc4I	CCNNNNNNNGG	4 cut(s)	851, 944, 969, 1279
Bse1I	ACTGG	5 cut(s)	739, 1348, 1508, 1513, 1629
Bse3DI	GCAATG	1 cut(s)	1170
BseAI	TCCGGA	1 cut(s)	749
BseBI	CCWGG	2 cut(s)	772, 1715
BseDI	CCNNGG	3 cut(s)	770, 943, 966
BseGI	GGATG	4 cut(s)	490, 1144, 1355, 1769
BseLI	CCNNNNNNNGG	4 cut(s)	851, 944, 969, 1279
BseMI	GCAATG	1 cut(s)	1170
BseNI	ACTGG	5 cut(s)	739, 1348, 1508, 1513, 1629
BseRI	GAGGAG	7 cut(s)	870, 873, 1027, 1118, 1198, 1207, 1718
BsgI	GTGCAG	2 cut(s)	939, 1743
Bsh1236I	CGCG	1 cut(s)	84
Bsh1285I	CGRYCG	1 cut(s)	531
BshFI	GGCC	5 cut(s)	153, 252, 839, 1328, 1512
BshNI	GGYRCC	1 cut(s)	1497
BsiEI	CGRYCG	1 cut(s)	531
BsiHKCI	CYCGRG	1 cut(s)	1264
BsiSI	CCGG	4 cut(s)	140, 188, 750, 1370
BslFI	GGGAC	1 cut(s)	753
BslI	CCNNNNNNNGG	4 cut(s)	851, 944, 969, 1279
BsmAI	GTCTC	5 cut(s)	14, 303, 614, 751, 863
BsmBI	CGTCTC	1 cut(s)	751
BsmFI	GGGAC	1 cut(s)	753
BsmI	GAATGC	2 cut(s)	267, 373
BsnI	GGCC	5 cut(s)	153, 252, 839, 1328, 1512
Bso31I	GGTCTC	1 cut(s)	863
BsoBI	CYCGRG	1 cut(s)	1264
Bsp119I	TTCGAA	1 cut(s)	335
Bsp13I	TCCGGA	1 cut(s)	749
Bsp143I	GATC	8 cut(s)	49, 574, 601, 817, 903, 1317, 1366, 1420
BspANI	GGCC	5 cut(s)	153, 252, 839, 1328, 1512
BspEI	TCCGGA	1 cut(s)	749
BspFNI	CGCG	1 cut(s)	84
BspLI	GGNNCC	6 cut(s)	144, 973, 1499, 1513, 1551, 1590
BspMAI	CTGCAG	1 cut(s)	1431
BspMI	ACCTGC	3 cut(s)	1525, 1564, 1715
BspOI	GCTAGC	1 cut(s)	833
BspPI	GGATC	3 cut(s)	609, 1325, 1361
BspQI	GCTCTTC	3 cut(s)	550, 698, 786
BspT104I	TTCGAA	1 cut(s)	335
BspT107I	GGYRCC	1 cut(s)	1497
BspTNI	GGTCTC	1 cut(s)	863
BsrBI	CCGCTC	1 cut(s)	708
BsrDI	GCAATG	1 cut(s)	1170
BsrI	ACTGG	5 cut(s)	739, 1348, 1508, 1513, 1629
BssECI	CCNNGG	3 cut(s)	770, 943, 966
BssMI	GATC	8 cut(s)	49, 574, 601, 817, 903, 1317, 1366, 1420
Bst2UI	CCWGG	2 cut(s)	772, 1715
Bst4CI	ACNGT	6 cut(s)	556, 778, 967, 1072, 1154, 1324
Bst6I	CTCTTC	7 cut(s)	81, 550, 698, 777, 786, 1004, 1184
BstBI	TTCGAA	1 cut(s)	335
BstC8I	GCNNGC	4 cut(s)	46, 66, 831, 1620
BstDSI	CCRYGG	2 cut(s)	943, 966
BstEII	GGTNACC	1 cut(s)	883
BstF5I	GGATG	4 cut(s)	490, 1144, 1355, 1769
BstFNI	CGCG	1 cut(s)	84
BstKTI	GATC	8 cut(s)	52, 577, 604, 820, 906, 1320, 1369, 1423
BstMAI	GTCTC	5 cut(s)	14, 303, 614, 751, 863
BstMBI	GATC	8 cut(s)	49, 574, 601, 817, 903, 1317, 1366, 1420
BstMCI	CGRYCG	1 cut(s)	531
BstMWI	GCNNNNNNNGC	8 cut(s)	213, 411, 441, 1528, 1531, 1570, 1609, 1757
BstNI	CCWGG	2 cut(s)	772, 1715
BstNSI	RCATGY	3 cut(s)	115, 269, 1294
BstPAI	GACNNNNGTC	1 cut(s)	1291
BstPI	GGTNACC	1 cut(s)	883
BstSCI	CCNGG	2 cut(s)	770, 1713
BstSFI	CTRYAG	4 cut(s)	1427, 1565, 1604, 1638
BstUI	CGCG	1 cut(s)	84
BstXI	CCANNNNNNTGG	2 cut(s)	847, 1508
BsuRI	GGCC	5 cut(s)	153, 252, 839, 1328, 1512
BtgI	CCRYGG	2 cut(s)	943, 966
BtsCI	GGATG	4 cut(s)	490, 1144, 1355, 1769
BtsI	GCAGTG	1 cut(s)	951
BtsIMutI	CAGTG	4 cut(s)	552, 951, 1501, 1515
BveI	ACCTGC	3 cut(s)	1525, 1564, 1715
Cac8I	GCNNGC	4 cut(s)	46, 66, 831, 1620
CaiI	CAGNNNCTG	1 cut(s)	566
Cfr13I	GGNCC	7 cut(s)	919, 972, 1327, 1345, 1511, 1550, 1589
Csp6I	GTAC	2 cut(s)	1234, 1728
CviAII	CATG	6 cut(s)	112, 266, 815, 874, 1291, 1391
CviQI	GTAC	2 cut(s)	1234, 1728
DpnI	GATC	8 cut(s)	51, 576, 603, 819, 905, 1319, 1368, 1422
DpnII	GATC	8 cut(s)	49, 574, 601, 817, 903, 1317, 1366, 1420
DrdI	GACNNNNNNGTC	1 cut(s)	743
DseDI	GACNNNNNNGTC	1 cut(s)	743
Eam1104I	CTCTTC	7 cut(s)	81, 550, 698, 777, 786, 1004, 1184
EarI	CTCTTC	7 cut(s)	81, 550, 698, 777, 786, 1004, 1184
Eco31I	GGTCTC	1 cut(s)	863
Eco32I	GATATC	1 cut(s)	7
Eco47I	GGWCC	5 cut(s)	919, 972, 1345, 1550, 1589
Eco57I	CTGAAG	1 cut(s)	1398
Eco88I	CYCGRG	1 cut(s)	1264
Eco91I	GGTNACC	1 cut(s)	883
EcoO109I	RGGNCCY	2 cut(s)	1550, 1589
EcoO65I	GGTNACC	1 cut(s)	883
EcoRI	GAATTC	2 cut(s)	513, 1159
EcoRII	CCWGG	2 cut(s)	770, 1713
EcoRV	GATATC	1 cut(s)	7
EcoT22I	ATGCAT	2 cut(s)	267, 1039
Esp3I	CGTCTC	1 cut(s)	751
FaeI	CATG	6 cut(s)	115, 269, 818, 877, 1294, 1394
FalI	AAGNNNNNCTT	2 cut(s)	1067, 1099
FaqI	GGGAC	1 cut(s)	753
FatI	CATG	6 cut(s)	111, 265, 814, 873, 1290, 1390
FauI	CCCGC	1 cut(s)	73
FauNDI	CATATG	2 cut(s)	480, 1039
FbaI	TGATCA	3 cut(s)	574, 903, 1420
FokI	GGATG	4 cut(s)	477, 1151, 1342, 1776
FspBI	CTAG	2 cut(s)	24, 830
HaeIII	GGCC	5 cut(s)	153, 252, 839, 1328, 1512
HapII	CCGG	4 cut(s)	140, 188, 750, 1370
Hin1II	CATG	6 cut(s)	115, 269, 818, 877, 1294, 1394
HincII	GTYRAC	1 cut(s)	1068
HindII	GTYRAC	1 cut(s)	1068
HindIII	AAGCTT	1 cut(s)	1088
HinfI	GANTC	4 cut(s)	611, 664, 725, 758
HpaII	CCGG	4 cut(s)	140, 188, 750, 1370
HphI	GGTGA	7 cut(s)	877, 898, 1018, 1084, 1192, 1406, 1427
Hpy166II	GTNNAC	4 cut(s)	932, 975, 1068, 1213
Hpy8I	GTNNAC	4 cut(s)	932, 975, 1068, 1213
Hpy99I	CGWCG	1 cut(s)	460
HpyAV	CCTTC	9 cut(s)	101, 845, 982, 1214, 1218, 1471, 1563, 1602, 1712
HpyCH4III	ACNGT	6 cut(s)	556, 778, 967, 1072, 1154, 1324
HpyF10VI	GCNNNNNNNGC	8 cut(s)	213, 411, 441, 1528, 1531, 1570, 1609, 1757
Hsp92II	CATG	6 cut(s)	115, 269, 818, 877, 1294, 1394
Kpn2I	TCCGGA	1 cut(s)	749
Ksp22I	TGATCA	3 cut(s)	574, 903, 1420
Kzo9I	GATC	8 cut(s)	49, 574, 601, 817, 903, 1317, 1366, 1420
LguI	GCTCTTC	3 cut(s)	550, 698, 786
LmnI	GCTCC	3 cut(s)	184, 860, 992
LweI	GCATC	7 cut(s)	499, 553, 816, 1004, 1024, 1364, 1441
MaeI	CTAG	2 cut(s)	24, 830
MaeIII	GTNAC	6 cut(s)	465, 678, 883, 1451, 1487, 1789
MalI	GATC	8 cut(s)	51, 576, 603, 819, 905, 1319, 1368, 1422
MbiI	CCGCTC	1 cut(s)	708
MboI	GATC	8 cut(s)	49, 574, 601, 817, 903, 1317, 1366, 1420
MlyI	GAGTC	3 cut(s)	620, 658, 734
MmeI	TCCRAC	2 cut(s)	337, 753
Mph1103I	ATGCAT	2 cut(s)	267, 1039
MroI	TCCGGA	1 cut(s)	749
MroXI	GAANNNNTTC	2 cut(s)	1079, 1259
MseI	TTAA	3 cut(s)	291, 651, 1097
MslI	CAYNNNNRTG	3 cut(s)	116, 1175, 1395
MspA1I	CMGCKG	3 cut(s)	184, 1361, 1615
MspI	CCGG	4 cut(s)	140, 188, 750, 1370
MspR9I	CCNGG	2 cut(s)	772, 1715
Mva1269I	GAATGC	2 cut(s)	267, 373
MvaI	CCWGG	2 cut(s)	772, 1715
MvnI	CGCG	1 cut(s)	84
MwoI	GCNNNNNNNGC	8 cut(s)	213, 411, 441, 1528, 1531, 1570, 1609, 1757
NdeI	CATATG	2 cut(s)	480, 1039
NdeII	GATC	8 cut(s)	49, 574, 601, 817, 903, 1317, 1366, 1420
NheI	GCTAGC	1 cut(s)	829
NlaIII	CATG	6 cut(s)	115, 269, 818, 877, 1294, 1394
NlaIV	GGNNCC	6 cut(s)	144, 973, 1499, 1513, 1551, 1590
NmuCI	GTSAC	4 cut(s)	465, 678, 883, 1487
NsiI	ATGCAT	2 cut(s)	267, 1039
NspI	RCATGY	3 cut(s)	115, 269, 1294
NspV	TTCGAA	1 cut(s)	335
PaqCI	CACCTGC	2 cut(s)	1525, 1564
PciI	ACATGT	1 cut(s)	1290
PciSI	GCTCTTC	3 cut(s)	550, 698, 786
PctI	GAATGC	2 cut(s)	267, 373
PdmI	GAANNNNTTC	2 cut(s)	1079, 1259
PfeI	GAWTC	1 cut(s)	758
PflMI	CCANNNNNTGG	1 cut(s)	1279
PleI	GAGTC	3 cut(s)	619, 658, 733
PpsI	GAGTC	3 cut(s)	619, 658, 733
PpuMI	RGGWCCY	2 cut(s)	1550, 1589
PscI	ACATGT	1 cut(s)	1290
PshAI	GACNNNNGTC	1 cut(s)	1291
PshBI	ATTAAT	1 cut(s)	1097
PsiI	TTATAA	1 cut(s)	1782
Psp5II	RGGWCCY	2 cut(s)	1550, 1589
Psp6I	CCWGG	2 cut(s)	770, 1713
PspEI	GGTNACC	1 cut(s)	883
PspGI	CCWGG	2 cut(s)	770, 1713
PspN4I	GGNNCC	6 cut(s)	144, 973, 1499, 1513, 1551, 1590
PspPI	GGNCC	7 cut(s)	919, 972, 1327, 1345, 1511, 1550, 1589
PspPPI	RGGWCCY	2 cut(s)	1550, 1589
PstI	CTGCAG	1 cut(s)	1431
PstNI	CAGNNNCTG	1 cut(s)	566
PvuII	CAGCTG	1 cut(s)	1615
RsaI	GTAC	2 cut(s)	1235, 1729
RsaNI	GTAC	2 cut(s)	1234, 1728
RseI	CAYNNNNRTG	3 cut(s)	116, 1175, 1395
SapI	GCTCTTC	3 cut(s)	550, 698, 786
SaqAI	TTAA	3 cut(s)	291, 651, 1097
Sau3AI	GATC	8 cut(s)	49, 574, 601, 817, 903, 1317, 1366, 1420
Sau96I	GGNCC	7 cut(s)	919, 972, 1327, 1345, 1511, 1550, 1589
SchI	GAGTC	3 cut(s)	620, 658, 734
ScrFI	CCNGG	2 cut(s)	772, 1715
SfaNI	GCATC	7 cut(s)	499, 553, 816, 1004, 1024, 1364, 1441
SfcI	CTRYAG	4 cut(s)	1427, 1565, 1604, 1638
SfuI	TTCGAA	1 cut(s)	335
SinI	GGWCC	5 cut(s)	919, 972, 1345, 1550, 1589
SmiMI	CAYNNNNRTG	3 cut(s)	116, 1175, 1395
SmlI	CTYRAG	2 cut(s)	125, 1310
SmoI	CTYRAG	2 cut(s)	125, 1310
SspI	AATATT	1 cut(s)	1114
SspMI	CTAG	2 cut(s)	24, 830
StyD4I	CCNGG	2 cut(s)	770, 1713
TaaI	ACNGT	6 cut(s)	556, 778, 967, 1072, 1154, 1324
TaqI	TCGA	6 cut(s)	9, 335, 365, 458, 635, 761
TaqII	GACCGA	1 cut(s)	936
TauI	GCSGC	4 cut(s)	84, 444, 523, 711
TfiI	GAWTC	1 cut(s)	758
Tru1I	TTAA	3 cut(s)	291, 651, 1097
Tru9I	TTAA	3 cut(s)	291, 651, 1097
TscAI	CASTG	4 cut(s)	559, 958, 1508, 1522
TseFI	GTSAC	4 cut(s)	465, 678, 883, 1487
Tsp45I	GTSAC	4 cut(s)	465, 678, 883, 1487
TspDTI	ATGAA	7 cut(s)	120, 306, 434, 476, 1155, 1217, 1413
TspGWI	ACGGA	3 cut(s)	444, 733, 960
TspRI	CASTG	4 cut(s)	559, 958, 1508, 1522
Van91I	CCANNNNNTGG	1 cut(s)	1279
VpaK11BI	GGWCC	5 cut(s)	919, 972, 1345, 1550, 1589
VspI	ATTAAT	1 cut(s)	1097
XapI	RAATTY	5 cut(s)	191, 448, 513, 1078, 1159
XceI	RCATGY	3 cut(s)	115, 269, 1294
XcmI	CCANNNNNNNNNTGG	1 cut(s)	501
XmnI	GAANNNNTTC	2 cut(s)	1079, 1259
XspI	CTAG	2 cut(s)	24, 830
Zsp2I	ATGCAT	2 cut(s)	267, 1039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.