Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0015587

Physical Location & Seq

Genomic Coordinates Forward (+)

4002463 .. 4004220

Gene Structure 1758 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1046000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGATATCCAACACAAAGAAACTAGGTTTCCGCCACTAGCTGCCCGCTATCAAGAGCCAACGCCCGCAAAGAAACCGAGCCGGGAAGAGATGGAGAACAACAATGGAGGACTGTTTCTGGAGCTCAAGGTTGCAAAGCCGGAACCTTTAGACCAAAACCCGCAAAACTCCTCCGCTACTCCGCGGCCTCAATTCACCAGATTCTGCGAGGTCTGCGGCAAGGGTTTCAGCTCAGGTAAGGCTCTCGGAGGCCACATGAGAATACATATTCAAGCTGACAGGGAATTGTTTAATCAGTCTCGCAAGAACATGATTTCATCAAAACCCAAGATTTCGAAACCTAATAATTCCGATGTTGGAAGCTCGAATGCCGGTGGTGTTGTTGGGATTGGAGGTAATAGCAATAGCATCAGCGATGTGAAGCCTGTTTGTTGCGTTTGCGGCAAGAATTTTCCGTCGATGAAGTCACTTTTTGGGCATATGAGGTCGCATCCAGAGAGAGAATGGAGGGGAATTCAGCCGCCTCCGGCCGCCAAAAACAGCTCTTCCTCCACTCTGTCAGATGCTGTGCCTGATCAGAGTGAGAAGAAAGATCAGGATGGTCAGATTGACTCTGATGAGATGTTTTTCGCGTCAAAAAGTTCGGCTCTTGATCTCTCCAAGACTCTGCCTAAATGGTCTCAAACCGCAAGGAGAGGGAGGAAGAGCGGCAGCACTGGACTAGAGTCCAACTCTGACCAGTCCGTCTCCGGTTTGGATTCGAGAAGTCCCAGGACTGTTGAAGAAGATGAAGAGCAGATGAAGGAAGCTGTCCATGATCTTTTGTTGCTAGCTCAGGCCAATCCATTGGAAGGAGGAGGAGCTGATGACACCATGTGTGAGGCCACCAACAGCAATTTCTTGATCACTGCCAATCAGGACGGAGAGCGAGGACTTCCATGCCATGGGTACACTGCAACCGCCACCGTGGGATCCACAAACAAGAGGAAGGGATCACCATCTGAGGTGGAGAGGAGTGAGAAAAAATGGTATGATGAATATGGTGGGGGTTTTGGTCAAGAAAAGTCAACGGTGAAGAATTTCTTGAAGCTTGGATTGATGGAGGAGGAAAATATAGGAAATCATAATAATATGGAGGATGAATTGTCAGACAGTCAGAATTCTGAGAGCATTGCGGTGATGAGGAGGAACAGGAGGAAGATGAAGTTGGTGGACTTGGAAGGAAGGCTGAGGTACAAGTGCAATCTCTGTGTGAAGTGTTTTCCTAGCCACCAAGCTCTGGGAGGACACATGTCAAGCCACAACAAGCTCAAGGGGATCGCGGTGGCCCACCCATCAATGGAGGACCAGTCTGCACCCGCTGACGTGTCGGTCGGTGAAGATAGGGTGCATGATGATGAAGCAGAAAGAGTAGCACTAGATCATCAGCAGCACCACCAGTGCAAAATCTGCAACAAGACCTTCCCAACAGGTCAGGCTTTGGGGGGTCACAAGAGGAGCCACTGGAATGGCCCCACTGAGCAGCACCAGCAGCAGGTGGTGGAGGGTCCCCCTGAGCAGCTACAGCAGCAGCTGCAAGCTCAGTCCAGTCAGAATATTGCAGGTGTTGGTGGTGGGAGAAGAGTTTTGGACTTTGACCTAAACGAGCTTCCACCAATGGAGGAGGATGACCAGCAAGGTGAGGGTGTAGGTTATCAGTATGGTGGGGCTGCGGCAGCTGGATGTGCACCTTCTTCTTACAATTCAGTTTCTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0055046 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2_6

Protein Analysis

586

Amino Acids

63.84

Weight (kDa)

6.05

Isoelectric Point (pI)

52.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C2H2_6	PF13912	69 - 89	1.9e-06	C2H2-type zinc finger
zf-C2H2_6	PF13912	144 - 166	2.2e-06	C2H2-type zinc finger
zf-C2H2_6	PF13912	411 - 436	5.6e-06	C2H2-type zinc finger
zf-C2H2_6	PF13912	478 - 502	1.5e-11	C2H2-type zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015587)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g41600
malus_domestica	MD03G1043000.v1.1 MD11G1046000.v1.1
prunus_persica	Prupe.6G035400_v2.0.a1
pyrus_communis	pycom03g03320 pycom11g03730
rosa_chinensis	RchiOBHm_Chr5g0074621
rosa_laevigata	RLG00000036491
rosa_multiflora	Rmu_sc0001104.1_g000006 Rmu_sc0019989.1_g000001
rosa_roxburghii	Rroxscaffold_1G00006960
rosa_rugosa	Rorug05G0433300
rosa_samantha	Rh5AG490400 Rh5BG511300 Rh5CG535000 Rh5DG523800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1525, 1592
AasI	GACNNNNNNGTC	2 cut(s)	743, 1370
Acc36I	ACCTGC	2 cut(s)	1525, 1592
AccB7I	CCANNNNNTGG	2 cut(s)	944, 1279
AccBSI	CCGCTC	1 cut(s)	708
AccII	CGCG	3 cut(s)	184, 632, 1322
AclWI	GGATC	4 cut(s)	966, 979, 1000, 1325
AcoI	YGGCCR	1 cut(s)	528
AcsI	RAATTY	4 cut(s)	448, 513, 1078, 1159
AdeI	CACNNNGTG	1 cut(s)	876
AfaI	GTAC	2 cut(s)	950, 1235
AfiI	CCNNNNNNNGG	5 cut(s)	851, 944, 1279, 1339, 1534
AflIII	ACRYGT	2 cut(s)	1290, 1365
AgsI	TTSAA	3 cut(s)	272, 782, 1087
AjiI	CACGTC	1 cut(s)	1366
AjnI	CCWGG	1 cut(s)	770
AjuI	GAANNNNNNNTTGG	4 cut(s)	881, 913, 1190, 1222
Alw21I	GWGCWC	2 cut(s)	126, 1729
Alw26I	GTCTC	3 cut(s)	303, 684, 751
Alw44I	GTGCAC	1 cut(s)	1725
AlwI	GGATC	4 cut(s)	966, 979, 1000, 1325
AlwNI	CAGNNNCTG	3 cut(s)	204, 566, 1573
AoxI	GGCC	7 cut(s)	185, 250, 528, 837, 882, 1326, 1510
ApaLI	GTGCAC	1 cut(s)	1725
ApoI	RAATTY	4 cut(s)	448, 513, 1078, 1159
Asp700I	GAANNNNTTC	1 cut(s)	1079
AspS9I	GGNCC	4 cut(s)	1327, 1345, 1511, 1547
AsuC2I	CCSGG	1 cut(s)	83
AsuHPI	GGTGA	6 cut(s)	187, 987, 1084, 1189, 1388, 1691
AsuII	TTCGAA	1 cut(s)	335
AsuNHI	GCTAGC	1 cut(s)	829
AvaII	GGWCC	2 cut(s)	1345, 1547
BaeGI	GKGCMC	1 cut(s)	1729
BamHI	GGATCC	1 cut(s)	971
BanII	GRGCYC	1 cut(s)	126
Bbv12I	GWGCWC	2 cut(s)	126, 1729
BbvCI	CCTCAGC	1 cut(s)	1229
BccI	CCATC	5 cut(s)	85, 593, 1006, 1093, 1342
BciT130I	CCWGG	1 cut(s)	772
BclI	TGATCA	2 cut(s)	574, 903
BcnI	CCSGG	1 cut(s)	83
BcoDI	GTCTC	3 cut(s)	303, 684, 751
BfaI	CTAG	6 cut(s)	24, 38, 722, 830, 1266, 1418
BfmI	CTRYAG	1 cut(s)	1562
BfuAI	ACCTGC	2 cut(s)	1525, 1592
Bme1390I	CCNGG	2 cut(s)	83, 772
Bme18I	GGWCC	2 cut(s)	1345, 1547
BmgBI	CACGTC	1 cut(s)	1366
BmgT120I	GGNCC	4 cut(s)	1327, 1345, 1511, 1547
BmiI	GGNNCC	6 cut(s)	144, 973, 1499, 1513, 1548, 1549
BmrFI	CCNGG	2 cut(s)	83, 772
BmsI	GCATC	3 cut(s)	417, 499, 553
BmtI	GCTAGC	1 cut(s)	833
BoxI	GACNNNNGTC	2 cut(s)	724, 1291
BplI	GAGNNNNNCTC	2 cut(s)	716, 748
BpmI	CTGGAG	1 cut(s)	140
Bpu10I	CCTNAGC	4 cut(s)	232, 834, 1229, 1554
Bpu14I	TTCGAA	1 cut(s)	335
BpuEI	CTTGAG	2 cut(s)	110, 1295
BpuMI	CCSGG	1 cut(s)	83
BsaBI	GATNNNNATC	1 cut(s)	997
BsaI	GGTCTC	1 cut(s)	684
BsaJI	CCNNGG	4 cut(s)	182, 770, 943, 966
BsaWI	WCCGGW	1 cut(s)	749
BsaXI	ACNNNNNCTCC	2 cut(s)	1334, 1364
Bsc4I	CCNNNNNNNGG	5 cut(s)	851, 944, 1279, 1339, 1534
Bse118I	RCCGGY	1 cut(s)	371
Bse1I	ACTGG	6 cut(s)	721, 739, 1348, 1438, 1508, 1587
Bse3DI	GCAATG	1 cut(s)	1170
Bse8I	GATNNNNATC	1 cut(s)	997
BseBI	CCWGG	1 cut(s)	772
BseDI	CCNNGG	4 cut(s)	182, 770, 943, 966
BseGI	GGATG	5 cut(s)	490, 604, 1144, 1672, 1727
BseJI	GATNNNNATC	1 cut(s)	997
BseLI	CCNNNNNNNGG	5 cut(s)	851, 944, 1279, 1339, 1534
BseMI	GCAATG	1 cut(s)	1170
BseMII	CTCAG	8 cut(s)	246, 848, 993, 1155, 1220, 1509, 1545, 1595
BseNI	ACTGG	6 cut(s)	721, 739, 1348, 1438, 1508, 1587
BseRI	GAGGAG	8 cut(s)	160, 870, 873, 1027, 1118, 1198, 1510, 1676
BseSI	GKGCMC	1 cut(s)	1729
BseX3I	CGGCCG	1 cut(s)	528
BsgI	GTGCAG	1 cut(s)	1338
Bsh1236I	CGCG	3 cut(s)	184, 632, 1322
Bsh1285I	CGRYCG	2 cut(s)	531, 1374
BshFI	GGCC	7 cut(s)	187, 252, 530, 839, 884, 1328, 1512
BsiEI	CGRYCG	2 cut(s)	531, 1374
BsiHKAI	GWGCWC	2 cut(s)	126, 1729
BsiSI	CCGG	5 cut(s)	82, 140, 372, 527, 750
BslFI	GGGAC	2 cut(s)	753, 1533
BslI	CCNNNNNNNGG	5 cut(s)	851, 944, 1279, 1339, 1534
BsmAI	GTCTC	3 cut(s)	303, 684, 751
BsmBI	CGTCTC	1 cut(s)	751
BsmFI	GGGAC	2 cut(s)	753, 1533
BsmI	GAATGC	1 cut(s)	373
BsnI	GGCC	7 cut(s)	187, 252, 530, 839, 884, 1328, 1512
Bso31I	GGTCTC	1 cut(s)	684
Bsp119I	TTCGAA	1 cut(s)	335
Bsp1286I	GDGCHC	2 cut(s)	126, 1729
Bsp143I	GATC	9 cut(s)	574, 592, 652, 817, 903, 971, 992, 1317, 1420
Bsp19I	CCATGG	1 cut(s)	943
BspANI	GGCC	7 cut(s)	187, 252, 530, 839, 884, 1328, 1512
BspCNI	CTCAG	8 cut(s)	245, 847, 994, 1156, 1221, 1510, 1546, 1594
BspFNI	CGCG	3 cut(s)	184, 632, 1322
BspLI	GGNNCC	6 cut(s)	144, 973, 1499, 1513, 1548, 1549
BspMI	ACCTGC	2 cut(s)	1525, 1592
BspOI	GCTAGC	1 cut(s)	833
BspPI	GGATC	4 cut(s)	966, 979, 1000, 1325
BspQI	GCTCTTC	3 cut(s)	550, 698, 786
BspT104I	TTCGAA	1 cut(s)	335
BspTNI	GGTCTC	1 cut(s)	684
BsrBI	CCGCTC	1 cut(s)	708
BsrDI	GCAATG	1 cut(s)	1170
BsrFI	RCCGGY	1 cut(s)	371
BsrI	ACTGG	6 cut(s)	721, 739, 1348, 1438, 1508, 1587
BssAI	RCCGGY	1 cut(s)	371
BssECI	CCNNGG	4 cut(s)	182, 770, 943, 966
BssMI	GATC	9 cut(s)	574, 592, 652, 817, 903, 971, 992, 1317, 1420
BssT1I	CCWWGG	1 cut(s)	943
Bst2UI	CCWGG	1 cut(s)	772
Bst4CI	ACNGT	5 cut(s)	114, 778, 967, 1072, 1154
Bst6I	CTCTTC	5 cut(s)	81, 550, 698, 786, 1615
BstAPI	GCANNNNNTGC	2 cut(s)	1449, 1573
BstBI	TTCGAA	1 cut(s)	335
BstC8I	GCNNGC	4 cut(s)	46, 66, 831, 1578
BstDEI	CTNAG	8 cut(s)	232, 834, 1002, 1164, 1229, 1518, 1554, 1581
BstDSI	CCRYGG	3 cut(s)	182, 943, 966
BstF5I	GGATG	5 cut(s)	490, 604, 1144, 1672, 1727
BstFNI	CGCG	3 cut(s)	184, 632, 1322
BstKTI	GATC	9 cut(s)	577, 595, 655, 820, 906, 974, 995, 1320, 1423
BstMAI	GTCTC	3 cut(s)	303, 684, 751
BstMBI	GATC	9 cut(s)	574, 592, 652, 817, 903, 971, 992, 1317, 1420
BstMCI	CGRYCG	2 cut(s)	531, 1374
BstNI	CCWGG	1 cut(s)	772
BstNSI	RCATGY	1 cut(s)	1294
BstPAI	GACNNNNGTC	2 cut(s)	724, 1291
BstSCI	CCNGG	2 cut(s)	81, 770
BstSFI	CTRYAG	1 cut(s)	1562
BstSLI	GKGCMC	1 cut(s)	1729
BstUI	CGCG	3 cut(s)	184, 632, 1322
BstX2I	RGATCY	1 cut(s)	971
BstXI	CCANNNNNNTGG	2 cut(s)	847, 1508
BstYI	RGATCY	1 cut(s)	971
BstZI	CGGCCG	1 cut(s)	528
BsuRI	GGCC	7 cut(s)	187, 252, 530, 839, 884, 1328, 1512
BtgI	CCRYGG	3 cut(s)	182, 943, 966
BtgZI	GCGATG	1 cut(s)	429
BtrI	CACGTC	1 cut(s)	1366
BtsCI	GGATG	5 cut(s)	490, 604, 1144, 1672, 1727
BtsI	GCAGTG	2 cut(s)	906, 951
BtsIMutI	CAGTG	6 cut(s)	714, 906, 951, 1445, 1501, 1515
BveI	ACCTGC	2 cut(s)	1525, 1592
Cac8I	GCNNGC	4 cut(s)	46, 66, 831, 1578
CaiI	CAGNNNCTG	3 cut(s)	204, 566, 1573
Cfr10I	RCCGGY	1 cut(s)	371
Cfr13I	GGNCC	4 cut(s)	1327, 1345, 1511, 1547
Cfr42I	CCGCGG	1 cut(s)	185
CseI	GACGC	1 cut(s)	621
Csp6I	GTAC	2 cut(s)	949, 1234
CviAII	CATG	8 cut(s)	256, 310, 815, 874, 939, 944, 1291, 1391
CviQI	GTAC	2 cut(s)	949, 1234
DdeI	CTNAG	8 cut(s)	232, 834, 1002, 1164, 1229, 1518, 1554, 1581
DpnI	GATC	9 cut(s)	576, 594, 654, 819, 905, 973, 994, 1319, 1422
DpnII	GATC	9 cut(s)	574, 592, 652, 817, 903, 971, 992, 1317, 1420
DraIII	CACNNNGTG	1 cut(s)	876
DrdI	GACNNNNNNGTC	2 cut(s)	743, 1370
DseDI	GACNNNNNNGTC	2 cut(s)	743, 1370
EaeI	YGGCCR	1 cut(s)	528
EagI	CGGCCG	1 cut(s)	528
Eam1104I	CTCTTC	5 cut(s)	81, 550, 698, 786, 1615
EarI	CTCTTC	5 cut(s)	81, 550, 698, 786, 1615
EciI	GGCGGA	1 cut(s)	21
Ecl136II	GAGCTC	1 cut(s)	124
EclXI	CGGCCG	1 cut(s)	528
Eco130I	CCWWGG	1 cut(s)	943
Eco24I	GRGCYC	1 cut(s)	126
Eco31I	GGTCTC	1 cut(s)	684
Eco32I	GATATC	1 cut(s)	7
Eco47I	GGWCC	2 cut(s)	1345, 1547
Eco52I	CGGCCG	1 cut(s)	528
Eco53kI	GAGCTC	1 cut(s)	124
EcoICRI	GAGCTC	1 cut(s)	124
EcoO109I	RGGNCCY	1 cut(s)	1547
EcoRI	GAATTC	2 cut(s)	513, 1159
EcoRII	CCWGG	1 cut(s)	770
EcoRV	GATATC	1 cut(s)	7
EcoT14I	CCWWGG	1 cut(s)	943
EcoT38I	GRGCYC	1 cut(s)	126
ErhI	CCWWGG	1 cut(s)	943
Esp3I	CGTCTC	1 cut(s)	751
FaeI	CATG	8 cut(s)	259, 313, 818, 877, 942, 947, 1294, 1394
FalI	AAGNNNNNCTT	2 cut(s)	1067, 1099
FaqI	GGGAC	2 cut(s)	753, 1533
FatI	CATG	8 cut(s)	255, 309, 814, 873, 938, 943, 1290, 1390
FauI	CCCGC	4 cut(s)	53, 73, 168, 1366
FauNDI	CATATG	1 cut(s)	480
FbaI	TGATCA	2 cut(s)	574, 903
FokI	GGATG	5 cut(s)	477, 611, 1151, 1679, 1734
FriOI	GRGCYC	1 cut(s)	126
FspBI	CTAG	6 cut(s)	24, 38, 722, 830, 1266, 1418
GsuI	CTGGAG	1 cut(s)	140
HaeIII	GGCC	7 cut(s)	187, 252, 530, 839, 884, 1328, 1512
HapII	CCGG	5 cut(s)	82, 140, 372, 527, 750
HgaI	GACGC	1 cut(s)	621
Hin1II	CATG	8 cut(s)	259, 313, 818, 877, 942, 947, 1294, 1394
HincII	GTYRAC	1 cut(s)	1068
HindII	GTYRAC	1 cut(s)	1068
HindIII	AAGCTT	1 cut(s)	1088
HinfI	GANTC	5 cut(s)	201, 611, 664, 725, 758
HpaII	CCGG	5 cut(s)	82, 140, 372, 527, 750
HphI	GGTGA	6 cut(s)	187, 987, 1084, 1189, 1388, 1691
Hpy166II	GTNNAC	4 cut(s)	951, 1068, 1213, 1727
Hpy8I	GTNNAC	4 cut(s)	951, 1068, 1213, 1727
Hpy99I	CGWCG	1 cut(s)	460
HpyAV	CCTTC	7 cut(s)	796, 845, 982, 1214, 1218, 1471, 1740
HpyCH4III	ACNGT	5 cut(s)	114, 778, 967, 1072, 1154
HpyCH4IV	ACGT	1 cut(s)	1365
HpyF3I	CTNAG	8 cut(s)	232, 834, 1002, 1164, 1229, 1518, 1554, 1581
HpySE526I	ACGT	1 cut(s)	1365
Hsp92II	CATG	8 cut(s)	259, 313, 818, 877, 942, 947, 1294, 1394
KflI	GGGWCCC	1 cut(s)	1547
Ksp22I	TGATCA	2 cut(s)	574, 903
KspI	CCGCGG	1 cut(s)	185
Kzo9I	GATC	9 cut(s)	574, 592, 652, 817, 903, 971, 992, 1317, 1420
LguI	GCTCTTC	3 cut(s)	550, 698, 786
LmnI	GCTCC	3 cut(s)	121, 860, 1497
LweI	GCATC	3 cut(s)	417, 499, 553
MaeI	CTAG	6 cut(s)	24, 38, 722, 830, 1266, 1418
MaeII	ACGT	1 cut(s)	1365
MaeIII	GTNAC	2 cut(s)	465, 1487
MalI	GATC	9 cut(s)	576, 594, 654, 819, 905, 973, 994, 1319, 1422
MbiI	CCGCTC	1 cut(s)	708
MboI	GATC	9 cut(s)	574, 592, 652, 817, 903, 971, 992, 1317, 1420
MflI	RGATCY	1 cut(s)	971
MhlI	GDGCHC	2 cut(s)	126, 1729
MlyI	GAGTC	3 cut(s)	605, 658, 734
MmeI	TCCRAC	3 cut(s)	34, 337, 753
MroXI	GAANNNNTTC	1 cut(s)	1079
MseI	TTAA	1 cut(s)	291
MslI	CAYNNNNRTG	3 cut(s)	1175, 1395, 1506
MspA1I	CMGCKG	4 cut(s)	184, 1361, 1573, 1718
MspI	CCGG	5 cut(s)	82, 140, 372, 527, 750
MspR9I	CCNGG	2 cut(s)	83, 772
Mva1269I	GAATGC	1 cut(s)	373
MvaI	CCWGG	1 cut(s)	772
MvnI	CGCG	3 cut(s)	184, 632, 1322
NciI	CCSGG	1 cut(s)	83
NcoI	CCATGG	1 cut(s)	943
NdeI	CATATG	1 cut(s)	480
NdeII	GATC	9 cut(s)	574, 592, 652, 817, 903, 971, 992, 1317, 1420
NheI	GCTAGC	1 cut(s)	829
NlaIII	CATG	8 cut(s)	259, 313, 818, 877, 942, 947, 1294, 1394
NlaIV	GGNNCC	6 cut(s)	144, 973, 1499, 1513, 1548, 1549
NmuCI	GTSAC	2 cut(s)	465, 1487
NspI	RCATGY	1 cut(s)	1294
NspV	TTCGAA	1 cut(s)	335
PaqCI	CACCTGC	2 cut(s)	1525, 1592
PciI	ACATGT	1 cut(s)	1290
PciSI	GCTCTTC	3 cut(s)	550, 698, 786
PctI	GAATGC	1 cut(s)	373
PdmI	GAANNNNTTC	1 cut(s)	1079
PfeI	GAWTC	2 cut(s)	201, 758
PflMI	CCANNNNNTGG	2 cut(s)	944, 1279
PleI	GAGTC	3 cut(s)	605, 658, 733
PpsI	GAGTC	3 cut(s)	605, 658, 733
PpuMI	RGGWCCY	1 cut(s)	1547
PscI	ACATGT	1 cut(s)	1290
PshAI	GACNNNNGTC	2 cut(s)	724, 1291
Psp124BI	GAGCTC	1 cut(s)	126
Psp5II	RGGWCCY	1 cut(s)	1547
Psp6I	CCWGG	1 cut(s)	770
PspGI	CCWGG	1 cut(s)	770
PspN4I	GGNNCC	6 cut(s)	144, 973, 1499, 1513, 1548, 1549
PspPI	GGNCC	4 cut(s)	1327, 1345, 1511, 1547
PspPPI	RGGWCCY	1 cut(s)	1547
PstNI	CAGNNNCTG	3 cut(s)	204, 566, 1573
PsuI	RGATCY	1 cut(s)	971
PvuII	CAGCTG	2 cut(s)	1573, 1718
RsaI	GTAC	2 cut(s)	950, 1235
RsaNI	GTAC	2 cut(s)	949, 1234
RseI	CAYNNNNRTG	3 cut(s)	1175, 1395, 1506
SacI	GAGCTC	1 cut(s)	126
SacII	CCGCGG	1 cut(s)	185
SapI	GCTCTTC	3 cut(s)	550, 698, 786
SaqAI	TTAA	1 cut(s)	291
Sau3AI	GATC	9 cut(s)	574, 592, 652, 817, 903, 971, 992, 1317, 1420
Sau96I	GGNCC	4 cut(s)	1327, 1345, 1511, 1547
SchI	GAGTC	3 cut(s)	605, 658, 734
ScrFI	CCNGG	2 cut(s)	83, 772
SduI	GDGCHC	2 cut(s)	126, 1729
SfaNI	GCATC	3 cut(s)	417, 499, 553
SfcI	CTRYAG	1 cut(s)	1562
Sfr303I	CCGCGG	1 cut(s)	185
SfuI	TTCGAA	1 cut(s)	335
SgrBI	CCGCGG	1 cut(s)	185
SinI	GGWCC	2 cut(s)	1345, 1547
SmiMI	CAYNNNNRTG	3 cut(s)	1175, 1395, 1506
SmlI	CTYRAG	2 cut(s)	125, 1310
SmoI	CTYRAG	2 cut(s)	125, 1310
SspI	AATATT	1 cut(s)	1597
SspMI	CTAG	6 cut(s)	24, 38, 722, 830, 1266, 1418
SstI	GAGCTC	1 cut(s)	126
StyD4I	CCNGG	2 cut(s)	81, 770
StyI	CCWWGG	1 cut(s)	943
TaaI	ACNGT	5 cut(s)	114, 778, 967, 1072, 1154
TaiI	ACGT	1 cut(s)	1368
TaqI	TCGA	4 cut(s)	335, 365, 458, 761
TaqII	GACCGA	1 cut(s)	1360
TauI	GCSGC	7 cut(s)	187, 219, 444, 523, 533, 711, 1715
TfiI	GAWTC	2 cut(s)	201, 758
Tru1I	TTAA	1 cut(s)	291
Tru9I	TTAA	1 cut(s)	291
TscAI	CASTG	6 cut(s)	721, 913, 958, 1445, 1508, 1522
TseFI	GTSAC	2 cut(s)	465, 1487
Tsp45I	GTSAC	2 cut(s)	465, 1487
TspDTI	ATGAA	8 cut(s)	306, 476, 804, 815, 1050, 1155, 1217, 1413
TspGWI	ACGGA	3 cut(s)	444, 733, 936
TspRI	CASTG	6 cut(s)	721, 913, 958, 1445, 1508, 1522
Van91I	CCANNNNNTGG	2 cut(s)	944, 1279
VneI	GTGCAC	1 cut(s)	1725
VpaK11BI	GGWCC	2 cut(s)	1345, 1547
XapI	RAATTY	4 cut(s)	448, 513, 1078, 1159
XceI	RCATGY	1 cut(s)	1294
XcmI	CCANNNNNNNNNTGG	1 cut(s)	501
XmnI	GAANNNNTTC	1 cut(s)	1079
XspI	CTAG	6 cut(s)	24, 38, 722, 830, 1266, 1418

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.