Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0014810

Physical Location & Seq

Genomic Coordinates Reverse (-)

4386785 .. 4388650

Gene Structure 1866 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1055000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

ATGAAGAATCTGGCCAGAGTTCTGAAATTAGCAACACCTGGCAGCATTGTTTCTTTTCCTGCACTGACAAGGGTGGTTGGTGTCGCTCCTCCTCCGCAATTCCACCTCGCAACAAGATTCATAGCGTCCAAGGTGGCCGACGCCCCCGCTAAGCCTCAGATTATGGCTTCCTCCTACTCCTCCTCCTCCTCCTCCTACAGCGACCCATGCCTCGATATCTTTTTCAAGGTGCGACCACCACCAGCATCTGCCGCCCGTACTTCCCACACTGACACTGCCCTCATCAACTCTCTCGAGCAACGGTTCCCACTCGCCTGGTCCCACAACCCCCTCACCACCCTCAAGCTTATCTCCAACCTCTCCACAAATCACGTCTATCCGGAAGCCTCGTCCGCGGCCACGTCTTGGCTCCACCGCAACCACCCCAGAACTCTGGCGCATAACCTTGACTCTTTCGGGGGATTGTACGCCATTGTCGAGATTCTCTACAGCCTTCTCCTTCCGCAGGACCAGCAGGAGACGGAGGTGGATGAGATGGAGGAGAAACACCGCCAGAGATACGACCGCGATCCGCATTACAAGTCCTTGCACGACCGCGCTATGGATATTTTTGTGGAGCGGCTCAAGTCCGATGTTCAAAAGATGCAGCAGAACAAGCTGGAACTCAAGCCTTCTGATTATTTAACTGATGACGACGATCATGACGAGGATGATTCTCGGGAACATGATTCTGTTATACGTCCTATTGATGCTGATGCTTTCGCTGATCTCTACGTCTCCGAGGCCGCAGACTGTTTCCTCACCACATTCCCCTCCGACGCCCATGCCATCCGCGCCATTGCGCTTCGCGAAAGCACTGCCAGGCGGCTCTTCCCTTTGGTGTCACAATCGCAACAACCAGATCAATCATCAAAGGAGGATGAACAGTGGGAGCGGCTGAGGAAGGAGTTCTTGGCGCCCTTGCAGAAGTACTACAAGCGTCAGGGCAGGTTCAACCCGAGACGGTGGGGTGTGGATATTAAATATTTGGAGCAGGTGAAAGCCTCAGCATCAACAGCAAGCAAAGGCAATTTAAGCTGCGTCATAGAGCCCGATGCTTTGCTTCCACATTTTATCATACGATATTTGAAAGATGCGAATGTTGGGGAGGCGGCTGAGCTTCAGTGGAATGCATTGCTGCGCAAGCACAAGGAGGGTGGCAAATTCAGAAACTGCTTCGCTGTATGTAACATGAACAGAATTACGGGCGGGGCTAGGGAATTGACGGCGAGTTTGGGACTTTTTGTGAGTGAACTGAATGAAGAGCCGGCCTGGAAAGGAAAGCTGATCAGTTCCGCTCCTCTTCCGGCTGCTGCCGGGGATGACCACGCTCTGTTATTTCGTCTTCCTCATCTGTATTCAGTACCCTGCAGCGATGGCCTAAGGTCCAAATTATCTTTTTTGATGGGAATGGACGGCCGCCTGGTAGTTCATTTGCAAAAGGTGTTTGATTTGATTCTCCAAGTGAGTGTCAATGAGAATTTGAAGCCAGATCAGATGATCCAGAAGCTCTTTATCTTCAACTACAACATGGGCTCTGATTTTTTTGATGGCGCGGCCTGGGAGACTCAGTACGAGGCCATAAGGACCATGTTTAAGGACAAAGGGTATGGGGATGATGCGGTGCCTCACATTCTGTTTTGGGATATTTGGTGCTGGGAATTGCCTTCAATCGCTTTGCCTCGTCCAGGGGTGACGCTATTGCGTGGCTGGTCTAATAATTTGGTCAGGTCCTTCTTGGAGAATGGTGGGGAGATTGGCCCGCACCATGTCATGGAAGCAGCCTTCTCGGACAAACATTTTCAAGCTCTTGCTGTTGTGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF2828

Protein Analysis

622

Amino Acids

70.08

Weight (kDa)

6.14

Isoelectric Point (pI)

41.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF2828	PF11443	63 - 152	4.3e-13	Domain of unknown function (DUF2828)
DUF7788	PF25043	405 - 597	2.9e-28	Domain of unknown function (DUF7788)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014810)

Species	Orthologous Gene IDs
malus_domestica	MD00G1207400.v1.1 MD03G1055000.v1.1 MD04G1053500.v1.1 MD06G1198700.v1.1 MD07G1028900.v1.1 MD12G1072700.v1.1
prunus_persica	Prupe.1G152600_v2.0.a1 Prupe.2G155300_v2.0.a1 Prupe.5G035500_v2.0.a1 Prupe.5G035900_v2.0.a1 Prupe.5G194100_v2.0.a1 Prupe.8G033200_v2.0.a1 Prupe.8G043600_v2.0.a1
pyrus_communis	pycom04g04610 pycom12g06140 pycom12g06180 pycom15g36970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1024
Acc16I	TGCGCA	1 cut(s)	1181
Acc36I	ACCTGC	2 cut(s)	978, 1024
AccB1I	GGYRCC	2 cut(s)	955, 1663
AccB7I	CCANNNNNTGG	2 cut(s)	405, 1813
AccBSI	CCGCTC	3 cut(s)	619, 934, 1337
AccII	CGCG	6 cut(s)	395, 567, 597, 834, 849, 1595
AccIII	TCCGGA	1 cut(s)	379
AclWI	GGATC	2 cut(s)	563, 1534
AcoI	YGGCCR	4 cut(s)	12, 135, 396, 1456
AcsI	RAATTY	2 cut(s)	1202, 1519
AcuI	CTGAAG	1 cut(s)	1145
AcyI	GRCGYC	3 cut(s)	141, 819, 956
AfaI	GTAC	5 cut(s)	259, 467, 971, 1404, 1613
AfiI	CCNNNNNNNGG	5 cut(s)	405, 505, 601, 1727, 1813
AgsI	TTSAA	8 cut(s)	226, 638, 994, 1129, 1525, 1561, 1710, 1844
AjiI	CACGTC	2 cut(s)	373, 402
AjnI	CCWGG	7 cut(s)	37, 314, 860, 1310, 1461, 1598, 1726
AjuI	GAANNNNNNNTTGG	2 cut(s)	935, 967
AluBI	AGCT	7 cut(s)	346, 658, 1077, 1159, 1324, 1549, 1847
AluI	AGCT	7 cut(s)	346, 658, 1077, 1159, 1324, 1549, 1847
Alw26I	GTCTC	4 cut(s)	512, 781, 994, 1598
AlwI	GGATC	2 cut(s)	563, 1534
AlwNI	CAGNNNCTG	2 cut(s)	248, 1212
Ama87I	CYCGRG	3 cut(s)	293, 717, 997
Aor13HI	TCCGGA	1 cut(s)	379
ApeKI	GCWGC	8 cut(s)	42, 646, 1077, 1177, 1349, 1352, 1410, 1820
ApoI	RAATTY	2 cut(s)	1202, 1519
ArsI	GACNNNNNNTTYG	2 cut(s)	1255, 1287
Asp700I	GAANNNNTTC	1 cut(s)	947
AspLEI	GCGC	7 cut(s)	439, 599, 836, 844, 958, 1182, 1595
AspS9I	GGNCC	6 cut(s)	318, 508, 1425, 1626, 1770, 1799
AsuC2I	CCSGG	1 cut(s)	1357
AsuHPI	GGTGA	4 cut(s)	325, 793, 1048, 1744
AvaI	CYCGRG	3 cut(s)	293, 717, 997
AvaII	GGWCC	5 cut(s)	318, 508, 1425, 1626, 1770
AxyI	CCTNAGG	1 cut(s)	1421
BalI	TGGCCA	1 cut(s)	14
BanI	GGYRCC	2 cut(s)	955, 1663
BanII	GRGCYC	2 cut(s)	1092, 1577
BbsI	GAAGAC	1 cut(s)	1376
BbvCI	CCTCAGC	2 cut(s)	938, 1045
BbvI	GCAGC	8 cut(s)	54, 658, 1064, 1164, 1336, 1339, 1422, 1832
BccI	CCATC	5 cut(s)	529, 836, 1409, 1438, 1583
BceAI	ACGGC	2 cut(s)	1281, 1471
BcgI	CGANNNNNNTGC	6 cut(s)	806, 839, 840, 873, 1809, 1843
BciT130I	CCWGG	7 cut(s)	39, 316, 862, 1312, 1463, 1600, 1728
BclI	TGATCA	1 cut(s)	1326
BcnI	CCSGG	1 cut(s)	1357
BcoDI	GTCTC	4 cut(s)	512, 781, 994, 1598
BfaI	CTAG	1 cut(s)	1254
BfmI	CTRYAG	3 cut(s)	196, 487, 1408
BfoI	RGCGCY	1 cut(s)	959
BfuAI	ACCTGC	2 cut(s)	978, 1024
BlpI	GCTNAGC	2 cut(s)	150, 1155
BmcAI	AGTACT	1 cut(s)	971
Bme1390I	CCNGG	8 cut(s)	39, 316, 862, 1312, 1357, 1463, 1600, 1728
Bme18I	GGWCC	5 cut(s)	318, 508, 1425, 1626, 1770
BmeT110I	CYCGRG	3 cut(s)	293, 717, 997
BmgBI	CACGTC	2 cut(s)	373, 402
BmgT120I	GGNCC	6 cut(s)	318, 508, 1425, 1626, 1770, 1799
BmiI	GGNNCC	5 cut(s)	305, 320, 410, 957, 1665
BmrFI	CCNGG	8 cut(s)	39, 316, 862, 1312, 1357, 1463, 1600, 1728
BmsI	GCATC	8 cut(s)	254, 633, 739, 745, 1058, 1084, 1123, 1648
BpiI	GAAGAC	1 cut(s)	1376
Bpu10I	CCTNAGC	2 cut(s)	938, 1045
Bpu1102I	GCTNAGC	2 cut(s)	150, 1155
BpuEI	CTTGAG	3 cut(s)	326, 608, 650
BpuMI	CCSGG	1 cut(s)	1357
BsaHI	GRCGYC	3 cut(s)	141, 819, 956
BsaJI	CCNNGG	6 cut(s)	129, 393, 780, 1356, 1599, 1727
BsaWI	WCCGGW	1 cut(s)	379
BsaXI	ACNNNNNCTCC	4 cut(s)	167, 197, 1595, 1625
Bsc4I	CCNNNNNNNGG	5 cut(s)	405, 505, 601, 1727, 1813
Bse118I	RCCGGY	1 cut(s)	1306
Bse21I	CCTNAGG	1 cut(s)	1421
Bse3DI	GCAATG	2 cut(s)	837, 1172
BseAI	TCCGGA	1 cut(s)	379
BseBI	CCWGG	7 cut(s)	39, 316, 862, 1312, 1463, 1600, 1728
BseDI	CCNNGG	6 cut(s)	129, 393, 780, 1356, 1599, 1727
BseGI	GGATG	6 cut(s)	535, 715, 828, 925, 1366, 1660
BseLI	CCNNNNNNNGG	5 cut(s)	405, 505, 601, 1727, 1813
BseMI	GCAATG	2 cut(s)	837, 1172
BseMII	CTCAG	5 cut(s)	170, 929, 1059, 1146, 1622
BseRI	GAGGAG	9 cut(s)	78, 81, 169, 172, 175, 178, 181, 554, 1329
BseX3I	CGGCCG	1 cut(s)	1456
BseXI	GCAGC	8 cut(s)	54, 658, 1064, 1164, 1336, 1339, 1422, 1832
BseYI	CCCAGC	1 cut(s)	1695
BsgI	GTGCAG	1 cut(s)	45
Bsh1236I	CGCG	6 cut(s)	395, 567, 597, 834, 849, 1595
Bsh1285I	CGRYCG	3 cut(s)	565, 595, 1459
BshNI	GGYRCC	2 cut(s)	955, 1663
BsiEI	CGRYCG	3 cut(s)	565, 595, 1459
BsiHKCI	CYCGRG	3 cut(s)	293, 717, 997
BsiSI	CCGG	4 cut(s)	380, 1307, 1346, 1356
BslFI	GGGAC	2 cut(s)	304, 1290
BslI	CCNNNNNNNGG	5 cut(s)	405, 505, 601, 1727, 1813
BsmAI	GTCTC	4 cut(s)	512, 781, 994, 1598
BsmBI	CGTCTC	3 cut(s)	512, 781, 994
BsmFI	GGGAC	2 cut(s)	304, 1290
BsmI	GAATGC	1 cut(s)	1174
BsoBI	CYCGRG	3 cut(s)	293, 717, 997
Bsp1286I	GDGCHC	2 cut(s)	1092, 1577
Bsp13I	TCCGGA	1 cut(s)	379
Bsp143I	GATC	7 cut(s)	568, 697, 766, 901, 1326, 1531, 1539
Bsp1720I	GCTNAGC	2 cut(s)	150, 1155
Bsp68I	TCGCGA	1 cut(s)	849
BspCNI	CTCAG	5 cut(s)	169, 930, 1058, 1147, 1621
BspEI	TCCGGA	1 cut(s)	379
BspFNI	CGCG	6 cut(s)	395, 567, 597, 834, 849, 1595
BspHI	TCATGA	1 cut(s)	700
BspLI	GGNNCC	5 cut(s)	305, 320, 410, 957, 1665
BspMAI	CTGCAG	1 cut(s)	1412
BspMI	ACCTGC	2 cut(s)	978, 1024
BspPI	GGATC	2 cut(s)	563, 1534
BspQI	GCTCTTC	2 cut(s)	875, 1296
BspT107I	GGYRCC	2 cut(s)	955, 1663
BsrBI	CCGCTC	3 cut(s)	619, 934, 1337
BsrDI	GCAATG	2 cut(s)	837, 1172
BsrFI	RCCGGY	1 cut(s)	1306
BssAI	RCCGGY	1 cut(s)	1306
BssECI	CCNNGG	6 cut(s)	129, 393, 780, 1356, 1599, 1727
BssMI	GATC	7 cut(s)	568, 697, 766, 901, 1326, 1531, 1539
BssNI	GRCGYC	3 cut(s)	141, 819, 956
BssT1I	CCWWGG	1 cut(s)	129
Bst2UI	CCWGG	7 cut(s)	39, 316, 862, 1312, 1463, 1600, 1728
Bst4CI	ACNGT	4 cut(s)	303, 794, 927, 1005
Bst6I	CTCTTC	3 cut(s)	875, 1296, 1347
BstACI	GRCGYC	3 cut(s)	141, 819, 956
BstC8I	GCNNGC	4 cut(s)	1060, 1184, 1308, 1802
BstDEI	CTNAG	7 cut(s)	150, 156, 938, 1045, 1155, 1421, 1608
BstDSI	CCRYGG	1 cut(s)	393
BstENI	CCTNNNNNAGG	2 cut(s)	503, 1725
BstF5I	GGATG	6 cut(s)	535, 715, 828, 925, 1366, 1660
BstFNI	CGCG	6 cut(s)	395, 567, 597, 834, 849, 1595
BstH2I	RGCGCY	1 cut(s)	959
BstHHI	GCGC	7 cut(s)	439, 599, 836, 844, 958, 1182, 1595
BstKTI	GATC	7 cut(s)	571, 700, 769, 904, 1329, 1534, 1542
BstMAI	GTCTC	4 cut(s)	512, 781, 994, 1598
BstMBI	GATC	7 cut(s)	568, 697, 766, 901, 1326, 1531, 1539
BstMCI	CGRYCG	3 cut(s)	565, 595, 1459
BstNI	CCWGG	7 cut(s)	39, 316, 862, 1312, 1463, 1600, 1728
BstSCI	CCNGG	8 cut(s)	37, 314, 860, 1310, 1355, 1461, 1598, 1726
BstSFI	CTRYAG	3 cut(s)	196, 487, 1408
BstUI	CGCG	6 cut(s)	395, 567, 597, 834, 849, 1595
BstV1I	GCAGC	8 cut(s)	54, 658, 1064, 1164, 1336, 1339, 1422, 1832
BstV2I	GAAGAC	1 cut(s)	1376
BstXI	CCANNNNNNTGG	2 cut(s)	315, 433
BstZI	CGGCCG	1 cut(s)	1456
Bsu36I	CCTNAGG	1 cut(s)	1421
BtgI	CCRYGG	1 cut(s)	393
BtgZI	GCGATG	1 cut(s)	1428
BtrI	CACGTC	2 cut(s)	373, 402
BtsCI	GGATG	6 cut(s)	535, 715, 828, 925, 1366, 1660
BtsI	GCAGTG	2 cut(s)	273, 855
BtsIMutI	CAGTG	6 cut(s)	62, 267, 273, 855, 932, 1169
BtuMI	TCGCGA	1 cut(s)	849
BveI	ACCTGC	2 cut(s)	978, 1024
Cac8I	GCNNGC	4 cut(s)	1060, 1184, 1308, 1802
CaiI	CAGNNNCTG	2 cut(s)	248, 1212
CciI	TCATGA	1 cut(s)	700
CfoI	GCGC	7 cut(s)	439, 599, 836, 844, 958, 1182, 1595
Cfr10I	RCCGGY	1 cut(s)	1306
Cfr13I	GGNCC	6 cut(s)	318, 508, 1425, 1626, 1770, 1799
Cfr42I	CCGCGG	1 cut(s)	396
CseI	GACGC	6 cut(s)	114, 149, 827, 968, 1069, 1744
Csp6I	GTAC	5 cut(s)	258, 466, 970, 1403, 1612
CspCI	CAANNNNNGTGG	2 cut(s)	1177, 1212
CviAII	CATG	9 cut(s)	207, 701, 725, 824, 1231, 1570, 1630, 1808, 1813
CviQI	GTAC	5 cut(s)	258, 466, 970, 1403, 1612
DdeI	CTNAG	7 cut(s)	150, 156, 938, 1045, 1155, 1421, 1608
DinI	GGCGCC	1 cut(s)	957
DpnI	GATC	7 cut(s)	570, 699, 768, 903, 1328, 1533, 1541
DpnII	GATC	7 cut(s)	568, 697, 766, 901, 1326, 1531, 1539
EaeI	YGGCCR	4 cut(s)	12, 135, 396, 1456
EagI	CGGCCG	1 cut(s)	1456
Eam1104I	CTCTTC	3 cut(s)	875, 1296, 1347
EarI	CTCTTC	3 cut(s)	875, 1296, 1347
EclXI	CGGCCG	1 cut(s)	1456
Eco130I	CCWWGG	1 cut(s)	129
Eco24I	GRGCYC	2 cut(s)	1092, 1577
Eco32I	GATATC	1 cut(s)	217
Eco47I	GGWCC	5 cut(s)	318, 508, 1425, 1626, 1770
Eco52I	CGGCCG	1 cut(s)	1456
Eco57I	CTGAAG	1 cut(s)	1145
Eco81I	CCTNAGG	1 cut(s)	1421
Eco88I	CYCGRG	3 cut(s)	293, 717, 997
EcoNI	CCTNNNNNAGG	2 cut(s)	503, 1725
EcoO109I	RGGNCCY	1 cut(s)	1770
EcoRII	CCWGG	7 cut(s)	37, 314, 860, 1310, 1461, 1598, 1726
EcoRV	GATATC	1 cut(s)	217
EcoT14I	CCWWGG	1 cut(s)	129
EcoT22I	ATGCAT	1 cut(s)	1174
EcoT38I	GRGCYC	2 cut(s)	1092, 1577
EgeI	GGCGCC	1 cut(s)	957
EheI	GGCGCC	1 cut(s)	957
ErhI	CCWWGG	1 cut(s)	129
Esp3I	CGTCTC	3 cut(s)	512, 781, 994
FaeI	CATG	9 cut(s)	210, 704, 728, 827, 1234, 1573, 1633, 1811, 1816
FalI	AAGNNNNNCTT	2 cut(s)	935, 967
FaqI	GGGAC	2 cut(s)	304, 1290
FatI	CATG	9 cut(s)	206, 700, 724, 823, 1230, 1569, 1629, 1807, 1812
FauI	CCCGC	3 cut(s)	154, 1241, 1809
FbaI	TGATCA	1 cut(s)	1326
FokI	GGATG	6 cut(s)	542, 722, 815, 932, 1373, 1667
FriOI	GRGCYC	2 cut(s)	1092, 1577
FspBI	CTAG	1 cut(s)	1254
FspI	TGCGCA	1 cut(s)	1181
GlaI	GCGC	7 cut(s)	438, 598, 835, 843, 957, 1181, 1594
GsaI	CCCAGC	1 cut(s)	1699
HaeII	RGCGCY	1 cut(s)	959
HapII	CCGG	4 cut(s)	380, 1307, 1346, 1356
HgaI	GACGC	6 cut(s)	114, 149, 827, 968, 1069, 1744
HhaI	GCGC	7 cut(s)	439, 599, 836, 844, 958, 1182, 1595
Hin1I	GRCGYC	3 cut(s)	141, 819, 956
Hin1II	CATG	9 cut(s)	210, 704, 728, 827, 1234, 1573, 1633, 1811, 1816
Hin6I	GCGC	7 cut(s)	437, 597, 834, 842, 956, 1180, 1593
HinP1I	GCGC	7 cut(s)	437, 597, 834, 842, 956, 1180, 1593
HindIII	AAGCTT	1 cut(s)	344
HinfI	GANTC	8 cut(s)	7, 117, 449, 481, 713, 728, 1495, 1606
HpaII	CCGG	4 cut(s)	380, 1307, 1346, 1356
HphI	GGTGA	4 cut(s)	325, 793, 1048, 1744
Hpy166II	GTNNAC	2 cut(s)	1292, 1861
Hpy188III	TCNNGA	7 cut(s)	293, 380, 478, 701, 719, 848, 1543
Hpy8I	GTNNAC	2 cut(s)	1292, 1861
Hpy99I	CGWCG	3 cut(s)	143, 698, 821
HpyAV	CCTTC	7 cut(s)	503, 509, 681, 937, 1716, 1783, 1834
HpyCH4III	ACNGT	4 cut(s)	303, 794, 927, 1005
HpyCH4IV	ACGT	4 cut(s)	372, 401, 739, 774
HpyCH4V	TGCA	7 cut(s)	62, 589, 646, 964, 1172, 1410, 1477
HpyF3I	CTNAG	7 cut(s)	150, 156, 938, 1045, 1155, 1421, 1608
HpySE526I	ACGT	4 cut(s)	372, 401, 739, 774
Hsp92I	GRCGYC	3 cut(s)	141, 819, 956
Hsp92II	CATG	9 cut(s)	210, 704, 728, 827, 1234, 1573, 1633, 1811, 1816
HspAI	GCGC	7 cut(s)	437, 597, 834, 842, 956, 1180, 1593
KasI	GGCGCC	1 cut(s)	955
Kpn2I	TCCGGA	1 cut(s)	379
KroI	GCCGGC	1 cut(s)	1306
KroNI	GCCGGC	1 cut(s)	1308
Ksp22I	TGATCA	1 cut(s)	1326
KspI	CCGCGG	1 cut(s)	396
Kzo9I	GATC	7 cut(s)	568, 697, 766, 901, 1326, 1531, 1539
LguI	GCTCTTC	2 cut(s)	875, 1296
LmnI	GCTCC	6 cut(s)	91, 414, 616, 931, 1030, 1342
Lsp1109I	GCAGC	8 cut(s)	54, 658, 1064, 1164, 1336, 1339, 1422, 1832
LweI	GCATC	8 cut(s)	254, 633, 739, 745, 1058, 1084, 1123, 1648
MaeI	CTAG	1 cut(s)	1254
MaeII	ACGT	4 cut(s)	372, 401, 739, 774
MaeIII	GTNAC	3 cut(s)	882, 1226, 1732
MalI	GATC	7 cut(s)	570, 699, 768, 903, 1328, 1533, 1541
MbiI	CCGCTC	3 cut(s)	619, 934, 1337
MboI	GATC	7 cut(s)	568, 697, 766, 901, 1326, 1531, 1539
MboII	GAAGA	6 cut(s)	16, 862, 1313, 1334, 1376, 1549
MhlI	GDGCHC	2 cut(s)	1092, 1577
MlsI	TGGCCA	1 cut(s)	14
MluNI	TGGCCA	1 cut(s)	14
Mly113I	GGCGCC	1 cut(s)	956
MlyI	GAGTC	2 cut(s)	443, 1600
MmeI	TCCRAC	2 cut(s)	378, 840
Mox20I	TGGCCA	1 cut(s)	14
Mph1103I	ATGCAT	1 cut(s)	1174
MroI	TCCGGA	1 cut(s)	379
MroNI	GCCGGC	1 cut(s)	1306
MroXI	GAANNNNTTC	1 cut(s)	947
MscI	TGGCCA	1 cut(s)	14
MseI	TTAA	4 cut(s)	683, 1020, 1073, 1635
Msp20I	TGGCCA	1 cut(s)	14
MspA1I	CMGCKG	1 cut(s)	395
MspI	CCGG	4 cut(s)	380, 1307, 1346, 1356
MspR9I	CCNGG	8 cut(s)	39, 316, 862, 1312, 1357, 1463, 1600, 1728
Mva1269I	GAATGC	1 cut(s)	1174
MvaI	CCWGG	7 cut(s)	39, 316, 862, 1312, 1463, 1600, 1728
MvnI	CGCG	6 cut(s)	395, 567, 597, 834, 849, 1595
NaeI	GCCGGC	1 cut(s)	1308
NarI	GGCGCC	1 cut(s)	956
NciI	CCSGG	1 cut(s)	1357
NdeII	GATC	7 cut(s)	568, 697, 766, 901, 1326, 1531, 1539
NgoMIV	GCCGGC	1 cut(s)	1306
NlaIII	CATG	9 cut(s)	210, 704, 728, 827, 1234, 1573, 1633, 1811, 1816
NlaIV	GGNNCC	5 cut(s)	305, 320, 410, 957, 1665
NmuCI	GTSAC	2 cut(s)	882, 1732
NruI	TCGCGA	1 cut(s)	849
NsbI	TGCGCA	1 cut(s)	1181
NsiI	ATGCAT	1 cut(s)	1174
PaeR7I	CTCGAG	1 cut(s)	293
PagI	TCATGA	1 cut(s)	700
PaqCI	CACCTGC	1 cut(s)	1024
PciSI	GCTCTTC	2 cut(s)	875, 1296
PcsI	WCGNNNNNNNCGW	2 cut(s)	474, 702
PctI	GAATGC	1 cut(s)	1174
PdiI	GCCGGC	1 cut(s)	1308
PdmI	GAANNNNTTC	1 cut(s)	947
PfeI	GAWTC	6 cut(s)	7, 117, 481, 713, 728, 1495
PflMI	CCANNNNNTGG	2 cut(s)	405, 1813
PleI	GAGTC	2 cut(s)	443, 1600
PluTI	GGCGCC	1 cut(s)	959
PpsI	GAGTC	2 cut(s)	443, 1600
PpuMI	RGGWCCY	1 cut(s)	1770
Psp5II	RGGWCCY	1 cut(s)	1770
Psp6I	CCWGG	7 cut(s)	37, 314, 860, 1310, 1461, 1598, 1726
PspFI	CCCAGC	1 cut(s)	1695
PspGI	CCWGG	7 cut(s)	37, 314, 860, 1310, 1461, 1598, 1726
PspN4I	GGNNCC	5 cut(s)	305, 320, 410, 957, 1665
PspPI	GGNCC	6 cut(s)	318, 508, 1425, 1626, 1770, 1799
PspPPI	RGGWCCY	1 cut(s)	1770
PstI	CTGCAG	1 cut(s)	1412
PstNI	CAGNNNCTG	2 cut(s)	248, 1212
RruI	TCGCGA	1 cut(s)	849
RsaI	GTAC	5 cut(s)	259, 467, 971, 1404, 1613
RsaNI	GTAC	5 cut(s)	258, 466, 970, 1403, 1612
SacII	CCGCGG	1 cut(s)	396
SapI	GCTCTTC	2 cut(s)	875, 1296
SaqAI	TTAA	4 cut(s)	683, 1020, 1073, 1635
Sau3AI	GATC	7 cut(s)	568, 697, 766, 901, 1326, 1531, 1539
Sau96I	GGNCC	6 cut(s)	318, 508, 1425, 1626, 1770, 1799
ScaI	AGTACT	1 cut(s)	971
SchI	GAGTC	2 cut(s)	443, 1600
ScrFI	CCNGG	8 cut(s)	39, 316, 862, 1312, 1357, 1463, 1600, 1728
SduI	GDGCHC	2 cut(s)	1092, 1577
SfaNI	GCATC	8 cut(s)	254, 633, 739, 745, 1058, 1084, 1123, 1648
SfcI	CTRYAG	3 cut(s)	196, 487, 1408
SfoI	GGCGCC	1 cut(s)	957
Sfr274I	CTCGAG	1 cut(s)	293
Sfr303I	CCGCGG	1 cut(s)	396
SgrBI	CCGCGG	1 cut(s)	396
SinI	GGWCC	5 cut(s)	318, 508, 1425, 1626, 1770
SlaI	CTCGAG	1 cut(s)	293
SmlI	CTYRAG	4 cut(s)	293, 341, 623, 665
SmoI	CTYRAG	4 cut(s)	293, 341, 623, 665
SspDI	GGCGCC	1 cut(s)	955
SspI	AATATT	1 cut(s)	1025
SspMI	CTAG	1 cut(s)	1254
StyD4I	CCNGG	8 cut(s)	37, 314, 860, 1310, 1355, 1461, 1598, 1726
StyI	CCWWGG	1 cut(s)	129
TaaI	ACNGT	4 cut(s)	303, 794, 927, 1005
TaiI	ACGT	4 cut(s)	375, 404, 742, 777
TaqI	TCGA	3 cut(s)	213, 294, 477
TatI	WGTACW	1 cut(s)	969
TauI	GCSGC	9 cut(s)	254, 398, 622, 788, 868, 937, 1154, 1461, 1598
TfiI	GAWTC	6 cut(s)	7, 117, 481, 713, 728, 1495
Tru1I	TTAA	4 cut(s)	683, 1020, 1073, 1635
Tru9I	TTAA	4 cut(s)	683, 1020, 1073, 1635
TscAI	CASTG	6 cut(s)	69, 274, 280, 862, 932, 1169
TseFI	GTSAC	2 cut(s)	882, 1732
TseI	GCWGC	8 cut(s)	42, 646, 1077, 1177, 1349, 1352, 1410, 1820
Tsp45I	GTSAC	2 cut(s)	882, 1732
TspDTI	ATGAA	6 cut(s)	17, 109, 936, 1247, 1314, 1460
TspGWI	ACGGA	1 cut(s)	536
TspRI	CASTG	6 cut(s)	69, 274, 280, 862, 932, 1169
Van91I	CCANNNNNTGG	2 cut(s)	405, 1813
VpaK11BI	GGWCC	5 cut(s)	318, 508, 1425, 1626, 1770
XagI	CCTNNNNNAGG	2 cut(s)	503, 1725
XapI	RAATTY	2 cut(s)	1202, 1519
XhoI	CTCGAG	1 cut(s)	293
XmnI	GAANNNNTTC	1 cut(s)	947
XspI	CTAG	1 cut(s)	1254
ZrmI	AGTACT	1 cut(s)	971
Zsp2I	ATGCAT	1 cut(s)	1174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.