Domain of unknown function (DUF2828)
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1207400.v1.1 MD03G1055000.v1.1 MD04G1053500.v1.1 MD06G1198700.v1.1 MD07G1028900.v1.1 MD12G1072700.v1.1 |
| prunus_persica | Prupe.1G152600_v2.0.a1 Prupe.2G155300_v2.0.a1 Prupe.5G035500_v2.0.a1 Prupe.5G035900_v2.0.a1 Prupe.5G194100_v2.0.a1 Prupe.8G033200_v2.0.a1 Prupe.8G043600_v2.0.a1 |
| pyrus_communis | pycom04g04610 pycom12g06140 pycom12g06180 pycom15g36970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1743 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1753 |
| AccBSI | CCGCTC | 1 cut(s) | 963 |
| AccI | GTMKAC | 2 cut(s) | 844, 1800 |
| AccII | CGCG | 2 cut(s) | 813, 1595 |
| AccIII | TCCGGA | 1 cut(s) | 415 |
| AclWI | GGATC | 1 cut(s) | 170 |
| AcoI | YGGCCR | 3 cut(s) | 123, 1236, 1738 |
| AcsI | RAATTY | 2 cut(s) | 674, 1166 |
| AcuI | CTGAAG | 3 cut(s) | 420, 738, 1082 |
| AcvI | CACGTG | 1 cut(s) | 202 |
| AcyI | GRCGYC | 1 cut(s) | 1744 |
| AfaI | GTAC | 4 cut(s) | 15, 742, 1127, 1592 |
| AfeI | AGCGCT | 1 cut(s) | 953 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 441, 588, 634, 895, 1542, 1667, 1753 |
| AflII | CTTAAG | 3 cut(s) | 314, 362, 1577 |
| AflIII | ACRYGT | 1 cut(s) | 1122 |
| AgsI | TTSAA | 5 cut(s) | 376, 658, 830, 853, 1471 |
| AhlI | ACTAGT | 1 cut(s) | 743 |
| AjnI | CCWGG | 3 cut(s) | 335, 758, 1666 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 887, 919 |
| AluBI | AGCT | 8 cut(s) | 367, 691, 1091, 1096, 1242, 1324, 1333, 1576 |
| AluI | AGCT | 8 cut(s) | 367, 691, 1091, 1096, 1242, 1324, 1333, 1576 |
| Alw26I | GTCTC | 3 cut(s) | 345, 792, 1307 |
| AlwI | GGATC | 1 cut(s) | 170 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 283 |
| Aor13HI | TCCGGA | 1 cut(s) | 415 |
| Aor51HI | AGCGCT | 1 cut(s) | 953 |
| AoxI | GGCC | 7 cut(s) | 123, 333, 420, 544, 562, 1236, 1738 |
| ApoI | RAATTY | 2 cut(s) | 674, 1166 |
| AseI | ATTAAT | 1 cut(s) | 95 |
| AspLEI | GCGC | 3 cut(s) | 815, 954, 1746 |
| AspS9I | GGNCC | 4 cut(s) | 445, 523, 706, 1307 |
| AsuC2I | CCSGG | 2 cut(s) | 629, 791 |
| AsuHPI | GGTGA | 8 cut(s) | 128, 185, 201, 1009, 1189, 1306, 1364, 1684 |
| AvaII | GGWCC | 4 cut(s) | 445, 523, 706, 1307 |
| AxyI | CCTNAGG | 1 cut(s) | 890 |
| BalI | TGGCCA | 1 cut(s) | 125 |
| BanI | GGYRCC | 1 cut(s) | 1743 |
| BanII | GRGCYC | 1 cut(s) | 912 |
| BauI | CACGAG | 1 cut(s) | 85 |
| BbrPI | CACGTG | 1 cut(s) | 202 |
| BccI | CCATC | 5 cut(s) | 146, 691, 731, 1291, 1755 |
| BceAI | ACGGC | 1 cut(s) | 559 |
| BciT130I | CCWGG | 3 cut(s) | 337, 760, 1668 |
| BclI | TGATCA | 1 cut(s) | 1485 |
| BcnI | CCSGG | 2 cut(s) | 629, 791 |
| BcoDI | GTCTC | 3 cut(s) | 345, 792, 1307 |
| BcuI | ACTAGT | 1 cut(s) | 743 |
| BfaI | CTAG | 1 cut(s) | 744 |
| BfmI | CTRYAG | 2 cut(s) | 284, 765 |
| BfoI | RGCGCY | 2 cut(s) | 955, 1747 |
| BfrI | CTTAAG | 3 cut(s) | 314, 362, 1577 |
| BglII | AGATCT | 1 cut(s) | 129 |
| BlpI | GCTNAGC | 1 cut(s) | 1092 |
| Bme1390I | CCNGG | 5 cut(s) | 337, 629, 760, 791, 1668 |
| Bme18I | GGWCC | 4 cut(s) | 445, 523, 706, 1307 |
| BmgT120I | GGNCC | 4 cut(s) | 445, 523, 706, 1307 |
| BmiI | GGNNCC | 8 cut(s) | 63, 446, 499, 524, 593, 708, 909, 1745 |
| BmrFI | CCNGG | 5 cut(s) | 337, 629, 760, 791, 1668 |
| BmsI | GCATC | 4 cut(s) | 565, 1021, 1587, 1632 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 410, 442 |
| BpmI | CTGGAG | 1 cut(s) | 1136 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1092 |
| BpuEI | CTTGAG | 1 cut(s) | 1343 |
| BpuMI | CCSGG | 2 cut(s) | 629, 791 |
| BsaAI | YACGTR | 1 cut(s) | 202 |
| BsaHI | GRCGYC | 1 cut(s) | 1744 |
| BsaI | GGTCTC | 3 cut(s) | 345, 792, 1307 |
| BsaJI | CCNNGG | 3 cut(s) | 759, 835, 1667 |
| BsaWI | WCCGGW | 1 cut(s) | 415 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 470, 500, 1109, 1139 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 441, 588, 634, 895, 1542, 1667, 1753 |
| Bse118I | RCCGGY | 4 cut(s) | 328, 494, 1276, 1740 |
| Bse1I | ACTGG | 2 cut(s) | 11, 17 |
| Bse21I | CCTNAGG | 1 cut(s) | 890 |
| Bse3DI | GCAATG | 2 cut(s) | 1034, 1116 |
| BseAI | TCCGGA | 1 cut(s) | 415 |
| BseBI | CCWGG | 3 cut(s) | 337, 760, 1668 |
| BseDI | CCNNGG | 3 cut(s) | 759, 835, 1667 |
| BseGI | GGATG | 4 cut(s) | 702, 1036, 1647, 1663 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 441, 588, 634, 895, 1542, 1667, 1753 |
| BseMI | GCAATG | 2 cut(s) | 1034, 1116 |
| BseMII | CTCAG | 1 cut(s) | 1083 |
| BseNI | ACTGG | 2 cut(s) | 11, 17 |
| BseRI | GAGGAG | 8 cut(s) | 54, 57, 124, 145, 148, 151, 1007, 1166 |
| BsgI | GTGCAG | 2 cut(s) | 1423, 1516 |
| Bsh1236I | CGCG | 2 cut(s) | 813, 1595 |
| Bsh1285I | CGRYCG | 1 cut(s) | 628 |
| BshFI | GGCC | 7 cut(s) | 125, 335, 422, 546, 564, 1238, 1740 |
| BshNI | GGYRCC | 1 cut(s) | 1743 |
| BsiEI | CGRYCG | 1 cut(s) | 628 |
| BsiSI | CCGG | 9 cut(s) | 329, 416, 495, 501, 628, 791, 1028, 1277, 1741 |
| BslFI | GGGAC | 3 cut(s) | 536, 897, 1650 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 441, 588, 634, 895, 1542, 1667, 1753 |
| BsmAI | GTCTC | 3 cut(s) | 345, 792, 1307 |
| BsmFI | GGGAC | 3 cut(s) | 536, 897, 1650 |
| BsmI | GAATGC | 1 cut(s) | 1336 |
| BsnI | GGCC | 7 cut(s) | 125, 335, 422, 546, 564, 1238, 1740 |
| Bso31I | GGTCTC | 3 cut(s) | 345, 792, 1307 |
| Bsp1286I | GDGCHC | 1 cut(s) | 912 |
| Bsp13I | TCCGGA | 1 cut(s) | 415 |
| Bsp143I | GATC | 6 cut(s) | 129, 175, 865, 1318, 1354, 1485 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1092 |
| BspANI | GGCC | 7 cut(s) | 125, 335, 422, 546, 564, 1238, 1740 |
| BspCNI | CTCAG | 1 cut(s) | 1084 |
| BspEI | TCCGGA | 1 cut(s) | 415 |
| BspFNI | CGCG | 2 cut(s) | 813, 1595 |
| BspLI | GGNNCC | 8 cut(s) | 63, 446, 499, 524, 593, 708, 909, 1745 |
| BspMAI | CTGCAG | 2 cut(s) | 288, 769 |
| BspPI | GGATC | 1 cut(s) | 170 |
| BspQI | GCTCTTC | 1 cut(s) | 1266 |
| BspT107I | GGYRCC | 1 cut(s) | 1743 |
| BspTI | CTTAAG | 3 cut(s) | 314, 362, 1577 |
| BspTNI | GGTCTC | 3 cut(s) | 345, 792, 1307 |
| BsrBI | CCGCTC | 1 cut(s) | 963 |
| BsrDI | GCAATG | 2 cut(s) | 1034, 1116 |
| BsrFI | RCCGGY | 4 cut(s) | 328, 494, 1276, 1740 |
| BsrI | ACTGG | 2 cut(s) | 11, 17 |
| BssAI | RCCGGY | 4 cut(s) | 328, 494, 1276, 1740 |
| BssECI | CCNNGG | 3 cut(s) | 759, 835, 1667 |
| BssMI | GATC | 6 cut(s) | 129, 175, 865, 1318, 1354, 1485 |
| BssNI | GRCGYC | 1 cut(s) | 1744 |
| BssSI | CACGAG | 1 cut(s) | 85 |
| BssT1I | CCWWGG | 1 cut(s) | 835 |
| Bst2BI | CACGAG | 1 cut(s) | 85 |
| Bst2UI | CCWGG | 3 cut(s) | 337, 760, 1668 |
| Bst4CI | ACNGT | 3 cut(s) | 173, 599, 1727 |
| Bst6I | CTCTTC | 3 cut(s) | 169, 870, 1266 |
| BstACI | GRCGYC | 1 cut(s) | 1744 |
| BstAFI | CTTAAG | 3 cut(s) | 314, 362, 1577 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 283, 325, 691, 1401 |
| BstBAI | YACGTR | 1 cut(s) | 202 |
| BstC8I | GCNNGC | 6 cut(s) | 297, 1006, 1240, 1278, 1574, 1742 |
| BstDEI | CTNAG | 4 cut(s) | 890, 1092, 1265, 1630 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 586, 893, 1665 |
| BstF5I | GGATG | 4 cut(s) | 702, 1036, 1647, 1663 |
| BstFNI | CGCG | 2 cut(s) | 813, 1595 |
| BstH2I | RGCGCY | 2 cut(s) | 955, 1747 |
| BstHHI | GCGC | 3 cut(s) | 815, 954, 1746 |
| BstKTI | GATC | 6 cut(s) | 132, 178, 868, 1321, 1357, 1488 |
| BstMAI | GTCTC | 3 cut(s) | 345, 792, 1307 |
| BstMBI | GATC | 6 cut(s) | 129, 175, 865, 1318, 1354, 1485 |
| BstMCI | CGRYCG | 1 cut(s) | 628 |
| BstNI | CCWGG | 3 cut(s) | 337, 760, 1668 |
| BstNSI | RCATGY | 3 cut(s) | 299, 1126, 1392 |
| BstSCI | CCNGG | 5 cut(s) | 335, 627, 758, 789, 1666 |
| BstSFI | CTRYAG | 2 cut(s) | 284, 765 |
| BstUI | CGCG | 2 cut(s) | 813, 1595 |
| BstX2I | RGATCY | 1 cut(s) | 129 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1210 |
| BstYI | RGATCY | 1 cut(s) | 129 |
| Bsu36I | CCTNAGG | 1 cut(s) | 890 |
| BsuRI | GGCC | 7 cut(s) | 125, 335, 422, 546, 564, 1238, 1740 |
| BtgZI | GCGATG | 1 cut(s) | 1610 |
| BtsCI | GGATG | 4 cut(s) | 702, 1036, 1647, 1663 |
| BtsI | GCAGTG | 2 cut(s) | 77, 1191 |
| BtsIMutI | CAGTG | 6 cut(s) | 24, 77, 595, 1106, 1191, 1506 |
| Cac8I | GCNNGC | 6 cut(s) | 297, 1006, 1240, 1278, 1574, 1742 |
| CaiI | CAGNNNCTG | 1 cut(s) | 283 |
| CfoI | GCGC | 3 cut(s) | 815, 954, 1746 |
| Cfr10I | RCCGGY | 4 cut(s) | 328, 494, 1276, 1740 |
| Cfr13I | GGNCC | 4 cut(s) | 445, 523, 706, 1307 |
| CseI | GACGC | 4 cut(s) | 289, 475, 578, 1684 |
| Csp6I | GTAC | 4 cut(s) | 14, 741, 1126, 1591 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1590, 1625 |
| CviQI | GTAC | 4 cut(s) | 14, 741, 1126, 1591 |
| DdeI | CTNAG | 4 cut(s) | 890, 1092, 1265, 1630 |
| DinI | GGCGCC | 1 cut(s) | 1745 |
| DpnI | GATC | 6 cut(s) | 131, 177, 867, 1320, 1356, 1487 |
| DpnII | GATC | 6 cut(s) | 129, 175, 865, 1318, 1354, 1485 |
| DraI | TTTAAA | 1 cut(s) | 1171 |
| EaeI | YGGCCR | 3 cut(s) | 123, 1236, 1738 |
| Eam1104I | CTCTTC | 3 cut(s) | 169, 870, 1266 |
| EarI | CTCTTC | 3 cut(s) | 169, 870, 1266 |
| Eco130I | CCWWGG | 1 cut(s) | 835 |
| Eco147I | AGGCCT | 1 cut(s) | 422 |
| Eco24I | GRGCYC | 1 cut(s) | 912 |
| Eco31I | GGTCTC | 3 cut(s) | 345, 792, 1307 |
| Eco32I | GATATC | 1 cut(s) | 1051 |
| Eco47I | GGWCC | 4 cut(s) | 445, 523, 706, 1307 |
| Eco47III | AGCGCT | 1 cut(s) | 953 |
| Eco57I | CTGAAG | 3 cut(s) | 420, 738, 1082 |
| Eco72I | CACGTG | 1 cut(s) | 202 |
| Eco81I | CCTNAGG | 1 cut(s) | 890 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 586, 893, 1665 |
| EcoO109I | RGGNCCY | 1 cut(s) | 523 |
| EcoRII | CCWGG | 3 cut(s) | 335, 758, 1666 |
| EcoRV | GATATC | 1 cut(s) | 1051 |
| EcoT14I | CCWWGG | 1 cut(s) | 835 |
| EcoT22I | ATGCAT | 1 cut(s) | 1036 |
| EcoT38I | GRGCYC | 1 cut(s) | 912 |
| EgeI | GGCGCC | 1 cut(s) | 1745 |
| EheI | GGCGCC | 1 cut(s) | 1745 |
| ErhI | CCWWGG | 1 cut(s) | 835 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 356, 388, 1700, 1732 |
| FaqI | GGGAC | 3 cut(s) | 536, 897, 1650 |
| FauI | CCCGC | 2 cut(s) | 612, 818 |
| FbaI | TGATCA | 1 cut(s) | 1485 |
| FblI | GTMKAC | 2 cut(s) | 844, 1800 |
| FokI | GGATG | 4 cut(s) | 709, 1043, 1650, 1654 |
| FriOI | GRGCYC | 1 cut(s) | 912 |
| FspBI | CTAG | 1 cut(s) | 744 |
| GlaI | GCGC | 3 cut(s) | 814, 953, 1745 |
| GsuI | CTGGAG | 1 cut(s) | 1136 |
| HaeII | RGCGCY | 2 cut(s) | 955, 1747 |
| HaeIII | GGCC | 7 cut(s) | 125, 335, 422, 546, 564, 1238, 1740 |
| HapII | CCGG | 9 cut(s) | 329, 416, 495, 501, 628, 791, 1028, 1277, 1741 |
| HgaI | GACGC | 4 cut(s) | 289, 475, 578, 1684 |
| HhaI | GCGC | 3 cut(s) | 815, 954, 1746 |
| Hin1I | GRCGYC | 1 cut(s) | 1744 |
| Hin6I | GCGC | 3 cut(s) | 813, 952, 1744 |
| HinP1I | GCGC | 3 cut(s) | 813, 952, 1744 |
| HincII | GTYRAC | 1 cut(s) | 1801 |
| HindII | GTYRAC | 1 cut(s) | 1801 |
| HindIII | AAGCTT | 1 cut(s) | 1574 |
| HinfI | GANTC | 5 cut(s) | 535, 860, 885, 930, 1221 |
| HpaII | CCGG | 9 cut(s) | 329, 416, 495, 501, 628, 791, 1028, 1277, 1741 |
| HphI | GGTGA | 8 cut(s) | 128, 185, 201, 1009, 1189, 1306, 1364, 1684 |
| Hpy166II | GTNNAC | 5 cut(s) | 448, 845, 1262, 1506, 1801 |
| Hpy188I | TCNGA | 6 cut(s) | 51, 664, 718, 865, 874, 1425 |
| Hpy188III | TCNNGA | 7 cut(s) | 85, 398, 416, 532, 947, 1445, 1489 |
| Hpy8I | GTNNAC | 5 cut(s) | 448, 845, 1262, 1506, 1801 |
| HpyCH4III | ACNGT | 3 cut(s) | 173, 599, 1727 |
| HpyCH4IV | ACGT | 2 cut(s) | 201, 1515 |
| HpyF3I | CTNAG | 4 cut(s) | 890, 1092, 1265, 1630 |
| HpySE526I | ACGT | 2 cut(s) | 201, 1515 |
| Hsp92I | GRCGYC | 1 cut(s) | 1744 |
| HspAI | GCGC | 3 cut(s) | 813, 952, 1744 |
| KasI | GGCGCC | 1 cut(s) | 1743 |
| Kpn2I | TCCGGA | 1 cut(s) | 415 |
| KroI | GCCGGC | 2 cut(s) | 1276, 1740 |
| KroNI | GCCGGC | 2 cut(s) | 1278, 1742 |
| Ksp22I | TGATCA | 1 cut(s) | 1485 |
| Kzo9I | GATC | 6 cut(s) | 129, 175, 865, 1318, 1354, 1485 |
| LguI | GCTCTTC | 1 cut(s) | 1266 |
| LmnI | GCTCC | 5 cut(s) | 67, 400, 503, 597, 907 |
| LweI | GCATC | 4 cut(s) | 565, 1021, 1587, 1632 |
| MaeI | CTAG | 1 cut(s) | 744 |
| MaeII | ACGT | 2 cut(s) | 201, 1515 |
| MaeIII | GTNAC | 8 cut(s) | 116, 202, 241, 599, 618, 754, 1190, 1672 |
| MalI | GATC | 6 cut(s) | 131, 177, 867, 1320, 1356, 1487 |
| MbiI | CCGCTC | 1 cut(s) | 963 |
| MboI | GATC | 6 cut(s) | 129, 175, 865, 1318, 1354, 1485 |
| MflI | RGATCY | 1 cut(s) | 129 |
| MhlI | GDGCHC | 1 cut(s) | 912 |
| MlsI | TGGCCA | 1 cut(s) | 125 |
| MluCI | AATT | 8 cut(s) | 382, 505, 674, 701, 1166, 1204, 1229, 1734 |
| MluNI | TGGCCA | 1 cut(s) | 125 |
| Mly113I | GGCGCC | 1 cut(s) | 1744 |
| MlyI | GAGTC | 4 cut(s) | 869, 879, 924, 1230 |
| MmeI | TCCRAC | 1 cut(s) | 1719 |
| Mox20I | TGGCCA | 1 cut(s) | 125 |
| Mph1103I | ATGCAT | 1 cut(s) | 1036 |
| MroI | TCCGGA | 1 cut(s) | 415 |
| MroNI | GCCGGC | 2 cut(s) | 1276, 1740 |
| MscI | TGGCCA | 1 cut(s) | 125 |
| MseI | TTAA | 9 cut(s) | 95, 306, 315, 363, 678, 978, 1170, 1578, 1707 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1253 |
| Msp20I | TGGCCA | 1 cut(s) | 125 |
| MspA1I | CMGCKG | 4 cut(s) | 1014, 1091, 1324, 1333 |
| MspCI | CTTAAG | 3 cut(s) | 314, 362, 1577 |
| MspI | CCGG | 9 cut(s) | 329, 416, 495, 501, 628, 791, 1028, 1277, 1741 |
| MspR9I | CCNGG | 5 cut(s) | 337, 629, 760, 791, 1668 |
| Mva1269I | GAATGC | 1 cut(s) | 1336 |
| MvaI | CCWGG | 3 cut(s) | 337, 760, 1668 |
| MvnI | CGCG | 2 cut(s) | 813, 1595 |
| NaeI | GCCGGC | 2 cut(s) | 1278, 1742 |
| NarI | GGCGCC | 1 cut(s) | 1744 |
| NciI | CCSGG | 2 cut(s) | 629, 791 |
| NdeII | GATC | 6 cut(s) | 129, 175, 865, 1318, 1354, 1485 |
| NgoMIV | GCCGGC | 2 cut(s) | 1276, 1740 |
| NlaIV | GGNNCC | 8 cut(s) | 63, 446, 499, 524, 593, 708, 909, 1745 |
| NmeAIII | GCCGAG | 1 cut(s) | 673 |
| NmuCI | GTSAC | 5 cut(s) | 116, 202, 241, 599, 1672 |
| NsiI | ATGCAT | 1 cut(s) | 1036 |
| NspI | RCATGY | 3 cut(s) | 299, 1126, 1392 |
| PaeI | GCATGC | 1 cut(s) | 299 |
| PceI | AGGCCT | 1 cut(s) | 422 |
| PciI | ACATGT | 1 cut(s) | 1122 |
| PciSI | GCTCTTC | 1 cut(s) | 1266 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1645 |
| PctI | GAATGC | 1 cut(s) | 1336 |
| PdiI | GCCGGC | 2 cut(s) | 1278, 1742 |
| PfeI | GAWTC | 1 cut(s) | 535 |
| PflFI | GACNNNGTC | 1 cut(s) | 527 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1753 |
| PleI | GAGTC | 4 cut(s) | 868, 879, 924, 1229 |
| PluTI | GGCGCC | 1 cut(s) | 1747 |
| PmaCI | CACGTG | 1 cut(s) | 202 |
| PmlI | CACGTG | 1 cut(s) | 202 |
| PpsI | GAGTC | 4 cut(s) | 868, 879, 924, 1229 |
| Ppu21I | YACGTR | 1 cut(s) | 202 |
| PpuMI | RGGWCCY | 1 cut(s) | 523 |
| PscI | ACATGT | 1 cut(s) | 1122 |
| PshBI | ATTAAT | 1 cut(s) | 95 |
| Psp5II | RGGWCCY | 1 cut(s) | 523 |
| Psp6I | CCWGG | 3 cut(s) | 335, 758, 1666 |
| PspCI | CACGTG | 1 cut(s) | 202 |
| PspGI | CCWGG | 3 cut(s) | 335, 758, 1666 |
| PspN4I | GGNNCC | 8 cut(s) | 63, 446, 499, 524, 593, 708, 909, 1745 |
| PspPI | GGNCC | 4 cut(s) | 445, 523, 706, 1307 |
| PspPPI | RGGWCCY | 1 cut(s) | 523 |
| PstI | CTGCAG | 2 cut(s) | 288, 769 |
| PstNI | CAGNNNCTG | 1 cut(s) | 283 |
| PsuI | RGATCY | 1 cut(s) | 129 |
| PsyI | GACNNNGTC | 1 cut(s) | 527 |
| PvuII | CAGCTG | 3 cut(s) | 1091, 1324, 1333 |
| RsaI | GTAC | 4 cut(s) | 15, 742, 1127, 1592 |
| RsaNI | GTAC | 4 cut(s) | 14, 741, 1126, 1591 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1253 |
| SalI | GTCGAC | 1 cut(s) | 1799 |
| SapI | GCTCTTC | 1 cut(s) | 1266 |
| SaqAI | TTAA | 9 cut(s) | 95, 306, 315, 363, 678, 978, 1170, 1578, 1707 |
| Sau3AI | GATC | 6 cut(s) | 129, 175, 865, 1318, 1354, 1485 |
| Sau96I | GGNCC | 4 cut(s) | 445, 523, 706, 1307 |
| SchI | GAGTC | 4 cut(s) | 869, 879, 924, 1230 |
| ScrFI | CCNGG | 5 cut(s) | 337, 629, 760, 791, 1668 |
| SduI | GDGCHC | 1 cut(s) | 912 |
| SfaNI | GCATC | 4 cut(s) | 565, 1021, 1587, 1632 |
| SfcI | CTRYAG | 2 cut(s) | 284, 765 |
| SfoI | GGCGCC | 1 cut(s) | 1745 |
| SinI | GGWCC | 4 cut(s) | 445, 523, 706, 1307 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1253 |
| SmlI | CTYRAG | 4 cut(s) | 314, 362, 1358, 1577 |
| SmoI | CTYRAG | 4 cut(s) | 314, 362, 1358, 1577 |
| SpeI | ACTAGT | 1 cut(s) | 743 |
| SphI | GCATGC | 1 cut(s) | 299 |
| Sse9I | AATT | 8 cut(s) | 382, 505, 674, 701, 1166, 1204, 1229, 1734 |
| SseBI | AGGCCT | 1 cut(s) | 422 |
| SspDI | GGCGCC | 1 cut(s) | 1743 |
| SspI | AATATT | 1 cut(s) | 1621 |
| SspMI | CTAG | 1 cut(s) | 744 |
| StuI | AGGCCT | 1 cut(s) | 422 |
| StyD4I | CCNGG | 5 cut(s) | 335, 627, 758, 789, 1666 |
| StyI | CCWWGG | 1 cut(s) | 835 |
| TaaI | ACNGT | 3 cut(s) | 173, 599, 1727 |
| TaiI | ACGT | 2 cut(s) | 204, 1518 |
| TaqI | TCGA | 4 cut(s) | 531, 946, 1340, 1800 |
| TaqII | GACCGA | 2 cut(s) | 932, 1295 |
| TasI | AATT | 8 cut(s) | 382, 505, 674, 701, 1166, 1204, 1229, 1734 |
| TauI | GCSGC | 6 cut(s) | 437, 963, 1011, 1017, 1238, 1330 |
| TfiI | GAWTC | 1 cut(s) | 535 |
| Tru1I | TTAA | 9 cut(s) | 95, 306, 315, 363, 678, 978, 1170, 1578, 1707 |
| Tru9I | TTAA | 9 cut(s) | 95, 306, 315, 363, 678, 978, 1170, 1578, 1707 |
| TscAI | CASTG | 6 cut(s) | 24, 84, 602, 1106, 1191, 1513 |
| TseFI | GTSAC | 5 cut(s) | 116, 202, 241, 599, 1672 |
| Tsp45I | GTSAC | 5 cut(s) | 116, 202, 241, 599, 1672 |
| TspDTI | ATGAA | 5 cut(s) | 17, 279, 931, 1198, 1575 |
| TspGWI | ACGGA | 1 cut(s) | 1654 |
| TspRI | CASTG | 6 cut(s) | 24, 84, 602, 1106, 1191, 1513 |
| Tth111I | GACNNNGTC | 1 cut(s) | 527 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1753 |
| Vha464I | CTTAAG | 3 cut(s) | 314, 362, 1577 |
| VpaK11BI | GGWCC | 4 cut(s) | 445, 523, 706, 1307 |
| VspI | ATTAAT | 1 cut(s) | 95 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 586, 893, 1665 |
| XapI | RAATTY | 2 cut(s) | 674, 1166 |
| XceI | RCATGY | 3 cut(s) | 299, 1126, 1392 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1207 |
| XmiI | GTMKAC | 2 cut(s) | 844, 1800 |
| XspI | CTAG | 1 cut(s) | 744 |
| Zsp2I | ATGCAT | 1 cut(s) | 1036 |