MD03G1106900.v1.1

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0012131
Physical Location & Seq
Reverse (-)
9204178 .. 9206855
2678 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1106900.v1.1.491

Sequence Viewer

Length: 1563 bp
ATGATCAAACAGGGCTTCATCTCCGATCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCTCCAAGTTATATTCCCCCACCTCCTCGGCCTTCAAACCCCTCTCCTCCCCTCCTTCCCAACCGCCGCCGCCGCCGCCACCCCCACCGCCACCGCCGCCACCGCCACCGCAACTCGCCAGGACAACTCAGTCCCTGACTCGGGTGACCCAGTCCCAAACCCTCCACGAGATGATGTCCGACGGCCAGCACCGGAACTCCAAGCTCCTCCCGGACCGGAAGGTCCACGAGAAAGTCCACAGGCTCCTCCAAAACGCGCCATTTCGGAACCCCAATTGGGGAGGGCTGGTGTCCGGCGACGTCAGGCTGATGGTGGTGGCCAAGGACGGGTTCAGGGTCTCGATGGACGTGCACAAGAGCGTCCTGGAGGCGAAAAGCCGGTTCTTCGCCGAAAAACTCCGAAAAGATCGGGGGGTTTCGCACTGCGTGGAGATTTCGGACTGCGATGATGTGGAGGTGTATGTGGAGGCTGTGGTTCTCATGTATTATGATGATTTGAAGAGGAGGTTGATGGGTGAGGAGGTCTCTAGGGTTTTGGGTTTGCTGAAGGTATCTGCTGCTATCATGTTTGATGAAGGGATTACCTCATGCCTGGAGTATTTGGAAGCTGTTCCATGGTCTGAGGAAGAAGAGGAGAAAGTTGTATCGCAACTTGGTGAGCTCCAGCTTCATGAAGACTTAGCCGGTGAAGTTCTTATGAGAGTGTCATCTGAACCGTCCATTTCTGCAAGAGCCGATGATATCTTCATGAGATTGCTGACCGGAGTTCTTCATGCGAAGGATGATAGAGCTCGTCGGGAAATAAAAACTCTCATTTCTCGGTTGCTCAGAGAAGATGCAGCCAGTGACGGCAACATGATTGATGTCTCTAAAGAAACCCTTTACCATCTTTGCCATAGATGTCTCAGTTCTCTTGTTCTGTGCTTATCTGAAGCGACATCCGCAGATGATGGCAGGCGGGATCGCGGGGTTTTGATGGCGGAGATAGCGAGAGAGGCCGATAACATGCAGTGGATTGTTGGTATTCTGGTGGACAAGAAAATGGGTGATGAGTTTGTGAAGTTATGGGCGGATCAGAAGGAGCTTGCTGTCCTGCATTCGAACATTCCAACCATGTACAGGCACGAAATCAGTAGAATCACTGCTCAGCTGTGCGTTGCAATTGGGAGCAGGCATTTGCTTGCGCCCAAAGAAACGAGATTCTTGCTGCTATCGACATGGCTGGAAGCTCTGTATGAAGACTTCGGATGGATGAGGAGGGCTTCTTCGAGGTCTTTTGATAAGCAACTGGTTGAAGAGGGAATAAGCCAGACAATTCTCACGCTGCCATTGCAGCAGCAGCAGACTATTTTGCTTAATTGGTTCGATCGGTTTCTAAACAAGGGAGACGACTGCCCCAACATTCGGAAGGCGTTCGAGGTTTGGTGGAGAAGAGCATTTATCAAACACGTATCGGAGCACGAAAATACCCAGGTAGAAATAACTGTTTGTGACTACCCAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

521

Amino Acids

59.1

Weight (kDa)

6.06

Isoelectric Point (pI)

55.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 265 - 501 3.8e-68 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60050
fragaria_vesca FvH4_3g34280
malus_domestica MD03G1106900.v1.1 MD11G1119600.v1.1
prunus_persica Prupe.6G089700_v2.0.a1
pyrus_communis pycom03g08630 pycom11g10090
rosa_chinensis RchiOBHm_Chr5g0061841 RchiOBHm_Chr5g0061851
rosa_laevigata RLG00000035510
rosa_multiflora Rmu_sc0004134.1_g000002 Rmu_sc0011641.1_g000016
rosa_roxburghii Rroxscaffold_1G00018890
rosa_rugosa Rorug05G0344800
rosa_samantha Rh5AG405400 Rh5BG418200 Rh5CG442700 Rh5DG432300
rosa_wichuraiana Rw5G038060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 187, 278
AatII GACGTC 1 cut(s) 360
AccII CGCG 2 cut(s) 314, 1023
AclWI GGATC 3 cut(s) 48, 1026, 1137
AcoI YGGCCR 2 cut(s) 241, 375
AcuI CTGAAG 2 cut(s) 623, 1008
AcyI GRCGYC 1 cut(s) 357
AdeI CACNNNGTG 1 cut(s) 484
AfaI GTAC 1 cut(s) 1175
AfiI CCNNNNNNNGG 7 cut(s) 198, 199, 334, 335, 384, 1176, 1461
AflIII ACRYGT 1 cut(s) 1504
AgsI TTSAA 3 cut(s) 94, 556, 1352
AjiI CACGTC 1 cut(s) 406
AjnI CCWGG 4 cut(s) 176, 420, 648, 1527
AjuI GAANNNNNNNTTGG 2 cut(s) 371, 403
AluBI AGCT 9 cut(s) 262, 665, 718, 724, 848, 1141, 1207, 1286, 1560
AluI AGCT 9 cut(s) 262, 665, 718, 724, 848, 1141, 1207, 1286, 1560
Alw21I GWGCWC 4 cut(s) 411, 720, 850, 1518
Alw26I GTCTC 5 cut(s) 400, 586, 928, 965, 1437
Alw44I GTGCAC 1 cut(s) 407
AlwI GGATC 3 cut(s) 48, 1026, 1137
AlwNI CAGNNNCTG 1 cut(s) 193
Ama87I CYCGRG 1 cut(s) 198
AoxI GGCC 4 cut(s) 87, 241, 375, 1053
ApaLI GTGCAC 1 cut(s) 407
ApeKI GCWGC 7 cut(s) 614, 896, 1264, 1381, 1390, 1393, 1396
Asp700I GAANNNNTTC 2 cut(s) 666, 1469
AspLEI GCGC 2 cut(s) 316, 1243
AspS9I GGNCC 2 cut(s) 271, 280
AsuC2I CCSGG 1 cut(s) 269
AsuHPI GGTGA 5 cut(s) 214, 584, 725, 755, 1115
AsuII TTCGAA 1 cut(s) 1157
AvaI CYCGRG 1 cut(s) 198
AvaII GGWCC 2 cut(s) 271, 280
BaeGI GKGCMC 1 cut(s) 411
BalI TGGCCA 1 cut(s) 377
BanII GRGCYC 2 cut(s) 720, 850
BarI GAAGNNNNNNTAC 2 cut(s) 1283, 1315
BauI CACGAG 2 cut(s) 224, 284
BbsI GAAGAC 2 cut(s) 738, 1302
Bbv12I GWGCWC 4 cut(s) 411, 720, 850, 1518
BbvI GCAGC 7 cut(s) 601, 908, 1251, 1368, 1402, 1405, 1408
BccI CCATC 7 cut(s) 361, 394, 562, 951, 1001, 1027, 1299
BceAI ACGGC 3 cut(s) 31, 256, 922
BcgI CGANNNNNNTGC 4 cut(s) 388, 422, 1243, 1277
BciT130I CCWGG 4 cut(s) 178, 422, 650, 1529
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 269
BcoDI GTCTC 5 cut(s) 400, 586, 928, 965, 1437
BfaI CTAG 1 cut(s) 585
BlpI GCTNAGC 1 cut(s) 1203
Bme1390I CCNGG 5 cut(s) 178, 269, 422, 650, 1529
Bme18I GGWCC 2 cut(s) 271, 280
BmeT110I CYCGRG 1 cut(s) 198
BmgBI CACGTC 1 cut(s) 406
BmgT120I GGNCC 2 cut(s) 271, 280
BmiI GGNNCC 2 cut(s) 302, 326
BmrFI CCNGG 5 cut(s) 178, 269, 422, 650, 1529
BmrI ACTGGG 1 cut(s) 202
BmsI GCATC 1 cut(s) 883
BmuI ACTGGG 1 cut(s) 202
BpiI GAAGAC 2 cut(s) 738, 1302
BplI GAGNNNNNCTC 2 cut(s) 566, 598
BpmI CTGGAG 3 cut(s) 443, 671, 704
Bpu1102I GCTNAGC 1 cut(s) 1203
Bpu14I TTCGAA 1 cut(s) 1157
BpuMI CCSGG 1 cut(s) 269
BsaAI YACGTR 1 cut(s) 1507
BsaHI GRCGYC 1 cut(s) 357
BsaI GGTCTC 2 cut(s) 400, 586
BsaJI CCNNGG 4 cut(s) 84, 378, 671, 1527
BsaWI WCCGGW 3 cut(s) 249, 273, 818
BsaXI ACNNNNNCTCC 4 cut(s) 239, 269, 330, 360
Bsc4I CCNNNNNNNGG 7 cut(s) 198, 199, 334, 335, 384, 1176, 1461
Bse118I RCCGGY 2 cut(s) 435, 740
Bse1I ACTGG 3 cut(s) 208, 900, 1350
Bse3DI GCAATG 1 cut(s) 1385
BseBI CCWGG 4 cut(s) 178, 422, 650, 1529
BseDI CCNNGG 4 cut(s) 84, 378, 671, 1527
BseGI GGATG 4 cut(s) 844, 995, 1310, 1314
BseLI CCNNNNNNNGG 7 cut(s) 198, 199, 334, 335, 384, 1176, 1461
BseMI GCAATG 1 cut(s) 1385
BseMII CTCAG 5 cut(s) 200, 669, 898, 976, 1217
BseNI ACTGG 3 cut(s) 208, 900, 1350
BseRI GAGGAG 8 cut(s) 73, 94, 254, 293, 574, 590, 704, 1327
BseSI GKGCMC 1 cut(s) 411
BseXI GCAGC 7 cut(s) 601, 908, 1251, 1368, 1402, 1405, 1408
Bsh1236I CGCG 2 cut(s) 314, 1023
Bsh1285I CGRYCG 1 cut(s) 1426
BshFI GGCC 4 cut(s) 89, 243, 377, 1055
BsiEI CGRYCG 1 cut(s) 1426
BsiHKAI GWGCWC 4 cut(s) 411, 720, 850, 1518
BsiHKCI CYCGRG 1 cut(s) 198
BsiSI CCGG 7 cut(s) 250, 269, 274, 351, 436, 741, 819
BslFI GGGAC 2 cut(s) 175, 196
BslI CCNNNNNNNGG 7 cut(s) 198, 199, 334, 335, 384, 1176, 1461
BsmAI GTCTC 5 cut(s) 400, 586, 928, 965, 1437
BsmBI CGTCTC 1 cut(s) 1437
BsmFI GGGAC 2 cut(s) 175, 196
BsmI GAATGC 1 cut(s) 1153
BsnI GGCC 4 cut(s) 89, 243, 377, 1055
Bso31I GGTCTC 2 cut(s) 400, 586
BsoBI CYCGRG 1 cut(s) 198
Bsp119I TTCGAA 1 cut(s) 1157
Bsp1286I GDGCHC 4 cut(s) 411, 720, 850, 1518
Bsp1407I TGTACA 1 cut(s) 1173
Bsp143I GATC 7 cut(s) 3, 25, 53, 463, 1018, 1129, 1423
Bsp1720I GCTNAGC 1 cut(s) 1203
Bsp19I CCATGG 1 cut(s) 671
BspANI GGCC 4 cut(s) 89, 243, 377, 1055
BspCNI CTCAG 5 cut(s) 199, 670, 897, 975, 1216
BspFNI CGCG 2 cut(s) 314, 1023
BspHI TCATGA 2 cut(s) 727, 804
BspLI GGNNCC 2 cut(s) 302, 326
BspPI GGATC 3 cut(s) 48, 1026, 1137
BspQI GCTCTTC 1 cut(s) 1483
BspT104I TTCGAA 1 cut(s) 1157
BspTNI GGTCTC 2 cut(s) 400, 586
BsrDI GCAATG 1 cut(s) 1385
BsrFI RCCGGY 2 cut(s) 435, 740
BsrGI TGTACA 1 cut(s) 1173
BsrI ACTGG 3 cut(s) 208, 900, 1350
BssAI RCCGGY 2 cut(s) 435, 740
BssECI CCNNGG 4 cut(s) 84, 378, 671, 1527
BssMI GATC 7 cut(s) 3, 25, 53, 463, 1018, 1129, 1423
BssNI GRCGYC 1 cut(s) 357
BssSI CACGAG 2 cut(s) 224, 284
BssT1I CCWWGG 2 cut(s) 378, 671
Bst2BI CACGAG 2 cut(s) 224, 284
Bst2UI CCWGG 4 cut(s) 178, 422, 650, 1529
Bst4CI ACNGT 2 cut(s) 774, 1543
Bst6I CTCTTC 4 cut(s) 551, 681, 1347, 1483
BstACI GRCGYC 1 cut(s) 357
BstAUI TGTACA 1 cut(s) 1173
BstBAI YACGTR 1 cut(s) 1507
BstBI TTCGAA 1 cut(s) 1157
BstC8I GCNNGC 5 cut(s) 245, 1013, 1143, 1229, 1239
BstDEI CTNAG 6 cut(s) 186, 678, 736, 884, 962, 1203
BstDSI CCRYGG 1 cut(s) 671
BstEII GGTNACC 1 cut(s) 202
BstF5I GGATG 4 cut(s) 844, 995, 1310, 1314
BstFNI CGCG 2 cut(s) 314, 1023
BstHHI GCGC 2 cut(s) 316, 1243
BstKTI GATC 7 cut(s) 6, 28, 56, 466, 1021, 1132, 1426
BstMAI GTCTC 5 cut(s) 400, 586, 928, 965, 1437
BstMBI GATC 7 cut(s) 3, 25, 53, 463, 1018, 1129, 1423
BstMCI CGRYCG 1 cut(s) 1426
BstNI CCWGG 4 cut(s) 178, 422, 650, 1529
BstNSI RCATGY 1 cut(s) 1066
BstPI GGTNACC 1 cut(s) 202
BstSCI CCNGG 5 cut(s) 176, 267, 420, 648, 1527
BstSLI GKGCMC 1 cut(s) 411
BstUI CGCG 2 cut(s) 314, 1023
BstV1I GCAGC 7 cut(s) 601, 908, 1251, 1368, 1402, 1405, 1408
BstV2I GAAGAC 2 cut(s) 738, 1302
BstX2I RGATCY 1 cut(s) 53
BstYI RGATCY 1 cut(s) 53
BsuRI GGCC 4 cut(s) 89, 243, 377, 1055
BtgI CCRYGG 1 cut(s) 671
BtgZI GCGATG 1 cut(s) 516
BtrI CACGTC 1 cut(s) 406
BtsCI GGATG 4 cut(s) 844, 995, 1310, 1314
BtsI GCAGTG 3 cut(s) 478, 1073, 1197
BtsIMutI CAGTG 4 cut(s) 478, 907, 1073, 1197
Cac8I GCNNGC 5 cut(s) 245, 1013, 1143, 1229, 1239
CaiI CAGNNNCTG 1 cut(s) 193
CciI TCATGA 2 cut(s) 727, 804
CfoI GCGC 2 cut(s) 316, 1243
Cfr10I RCCGGY 2 cut(s) 435, 740
Cfr13I GGNCC 2 cut(s) 271, 280
CpoI CGGWCCG 1 cut(s) 271
CseI GACGC 1 cut(s) 406
Csp6I GTAC 1 cut(s) 1174
CspI CGGWCCG 1 cut(s) 271
CviQI GTAC 1 cut(s) 1174
DdeI CTNAG 6 cut(s) 186, 678, 736, 884, 962, 1203
DpnI GATC 7 cut(s) 5, 27, 55, 465, 1020, 1131, 1425
DpnII GATC 7 cut(s) 3, 25, 53, 463, 1018, 1129, 1423
DraIII CACNNNGTG 1 cut(s) 484
DrdI GACNNNNNNGTC 2 cut(s) 187, 278
DseDI GACNNNNNNGTC 2 cut(s) 187, 278
EaeI YGGCCR 2 cut(s) 241, 375
Eam1104I CTCTTC 4 cut(s) 551, 681, 1347, 1483
EarI CTCTTC 4 cut(s) 551, 681, 1347, 1483
EciI GGCGGA 2 cut(s) 1052, 1142
Ecl136II GAGCTC 2 cut(s) 718, 848
Eco130I CCWWGG 2 cut(s) 378, 671
Eco24I GRGCYC 2 cut(s) 720, 850
Eco31I GGTCTC 2 cut(s) 400, 586
Eco32I GATATC 1 cut(s) 799
Eco47I GGWCC 2 cut(s) 271, 280
Eco53kI GAGCTC 2 cut(s) 718, 848
Eco57I CTGAAG 2 cut(s) 623, 1008
Eco88I CYCGRG 1 cut(s) 198
Eco91I GGTNACC 1 cut(s) 202
EcoICRI GAGCTC 2 cut(s) 718, 848
EcoO65I GGTNACC 1 cut(s) 202
EcoRII CCWGG 4 cut(s) 176, 420, 648, 1527
EcoRV GATATC 1 cut(s) 799
EcoT14I CCWWGG 2 cut(s) 378, 671
EcoT38I GRGCYC 2 cut(s) 720, 850
ErhI CCWWGG 2 cut(s) 378, 671
Esp3I CGTCTC 1 cut(s) 1437
FalI AAGNNNNNCTT 2 cut(s) 921, 953
FaqI GGGAC 2 cut(s) 175, 196
FauI CCCGC 2 cut(s) 1008, 1016
FbaI TGATCA 1 cut(s) 3
FokI GGATG 4 cut(s) 851, 982, 1317, 1321
FriOI GRGCYC 2 cut(s) 720, 850
FspBI CTAG 1 cut(s) 585
GlaI GCGC 2 cut(s) 315, 1242
GsuI CTGGAG 3 cut(s) 443, 671, 704
HaeIII GGCC 4 cut(s) 89, 243, 377, 1055
HapII CCGG 7 cut(s) 250, 269, 274, 351, 436, 741, 819
HgaI GACGC 1 cut(s) 406
HhaI GCGC 2 cut(s) 316, 1243
Hin1I GRCGYC 1 cut(s) 357
Hin6I GCGC 2 cut(s) 314, 1241
HinP1I GCGC 2 cut(s) 314, 1241
HinfI GANTC 3 cut(s) 196, 1194, 1257
HpaII CCGG 7 cut(s) 250, 269, 274, 351, 436, 741, 819
HphI GGTGA 5 cut(s) 214, 584, 725, 755, 1115
Hpy166II GTNNAC 4 cut(s) 283, 295, 409, 1090
Hpy188III TCNNGA 5 cut(s) 51, 397, 728, 805, 854
Hpy8I GTNNAC 4 cut(s) 283, 295, 409, 1090
Hpy99I CGWCG 3 cut(s) 242, 359, 855
HpyAV CCTTC 9 cut(s) 49, 100, 123, 271, 598, 626, 829, 1129, 1459
HpyCH4III ACNGT 2 cut(s) 774, 1543
HpyCH4IV ACGT 3 cut(s) 357, 405, 1506
HpyCH4V TGCA 7 cut(s) 409, 785, 896, 1066, 1153, 1217, 1390
HpyF3I CTNAG 6 cut(s) 186, 678, 736, 884, 962, 1203
HpySE526I ACGT 3 cut(s) 357, 405, 1506
Hsp92I GRCGYC 1 cut(s) 357
HspAI GCGC 2 cut(s) 314, 1241
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 7 cut(s) 3, 25, 53, 463, 1018, 1129, 1423
LguI GCTCTTC 1 cut(s) 1483
LmnI GCTCC 6 cut(s) 267, 306, 723, 1138, 1224, 1513
Lsp1109I GCAGC 7 cut(s) 601, 908, 1251, 1368, 1402, 1405, 1408
LweI GCATC 1 cut(s) 883
MaeI CTAG 1 cut(s) 585
MaeII ACGT 3 cut(s) 357, 405, 1506
MaeIII GTNAC 3 cut(s) 202, 902, 1547
MalI GATC 7 cut(s) 5, 27, 55, 465, 1020, 1131, 1425
MboI GATC 7 cut(s) 3, 25, 53, 463, 1018, 1129, 1423
MfeI CAATTG 2 cut(s) 331, 1218
MflI RGATCY 1 cut(s) 53
MhlI GDGCHC 4 cut(s) 411, 720, 850, 1518
MlsI TGGCCA 1 cut(s) 377
MluCI AATT 4 cut(s) 331, 1218, 1371, 1414
MluNI TGGCCA 1 cut(s) 377
MlyI GAGTC 1 cut(s) 190
MmeI TCCRAC 2 cut(s) 261, 1190
Mox20I TGGCCA 1 cut(s) 377
MroXI GAANNNNTTC 2 cut(s) 666, 1469
MscI TGGCCA 1 cut(s) 377
MseI TTAA 1 cut(s) 1413
Msp20I TGGCCA 1 cut(s) 377
MspA1I CMGCKG 1 cut(s) 1207
MspI CCGG 7 cut(s) 250, 269, 274, 351, 436, 741, 819
MspR9I CCNGG 5 cut(s) 178, 269, 422, 650, 1529
MunI CAATTG 2 cut(s) 331, 1218
Mva1269I GAATGC 1 cut(s) 1153
MvaI CCWGG 4 cut(s) 178, 422, 650, 1529
MvnI CGCG 2 cut(s) 314, 1023
NciI CCSGG 1 cut(s) 269
NcoI CCATGG 1 cut(s) 671
NdeII GATC 7 cut(s) 3, 25, 53, 463, 1018, 1129, 1423
NlaIV GGNNCC 2 cut(s) 302, 326
NmeAIII GCCGAG 1 cut(s) 65
NmuCI GTSAC 3 cut(s) 202, 902, 1547
NspI RCATGY 1 cut(s) 1066
NspV TTCGAA 1 cut(s) 1157
PagI TCATGA 2 cut(s) 727, 804
PciSI GCTCTTC 1 cut(s) 1483
PctI GAATGC 1 cut(s) 1153
PdmI GAANNNNTTC 2 cut(s) 666, 1469
PfeI GAWTC 2 cut(s) 1194, 1257
PflFI GACNNNGTC 1 cut(s) 208
PfoI TCCNGGA 2 cut(s) 267, 420
Ple19I CGATCG 1 cut(s) 1426
PleI GAGTC 1 cut(s) 190
PpsI GAGTC 1 cut(s) 190
Ppu21I YACGTR 1 cut(s) 1507
Psp124BI GAGCTC 2 cut(s) 720, 850
Psp6I CCWGG 4 cut(s) 176, 420, 648, 1527
PspEI GGTNACC 1 cut(s) 202
PspGI CCWGG 4 cut(s) 176, 420, 648, 1527
PspN4I GGNNCC 2 cut(s) 302, 326
PspPI GGNCC 2 cut(s) 271, 280
PstNI CAGNNNCTG 1 cut(s) 193
PsuI RGATCY 1 cut(s) 53
PsyI GACNNNGTC 1 cut(s) 208
PvuI CGATCG 1 cut(s) 1426
PvuII CAGCTG 1 cut(s) 1207
RsaI GTAC 1 cut(s) 1175
RsaNI GTAC 1 cut(s) 1174
Rsr2I CGGWCCG 1 cut(s) 271
RsrII CGGWCCG 1 cut(s) 271
SacI GAGCTC 2 cut(s) 720, 850
SapI GCTCTTC 1 cut(s) 1483
SaqAI TTAA 1 cut(s) 1413
Sau3AI GATC 7 cut(s) 3, 25, 53, 463, 1018, 1129, 1423
Sau96I GGNCC 2 cut(s) 271, 280
SchI GAGTC 1 cut(s) 190
ScrFI CCNGG 5 cut(s) 178, 269, 422, 650, 1529
SduI GDGCHC 4 cut(s) 411, 720, 850, 1518
SfaNI GCATC 1 cut(s) 883
SfuI TTCGAA 1 cut(s) 1157
SinI GGWCC 2 cut(s) 271, 280
Sse9I AATT 4 cut(s) 331, 1218, 1371, 1414
SspMI CTAG 1 cut(s) 585
SstI GAGCTC 2 cut(s) 720, 850
StyD4I CCNGG 5 cut(s) 176, 267, 420, 648, 1527
StyI CCWWGG 2 cut(s) 378, 671
TaaI ACNGT 2 cut(s) 774, 1543
TaiI ACGT 3 cut(s) 360, 408, 1509
TaqI TCGA 6 cut(s) 398, 1157, 1271, 1325, 1422, 1473
TasI AATT 4 cut(s) 331, 1218, 1371, 1414
TatI WGTACW 1 cut(s) 1173
TauI GCSGC 5 cut(s) 127, 130, 133, 136, 157
TfiI GAWTC 2 cut(s) 1194, 1257
Tru1I TTAA 1 cut(s) 1413
Tru9I TTAA 1 cut(s) 1413
TscAI CASTG 4 cut(s) 485, 907, 1073, 1204
TseFI GTSAC 3 cut(s) 202, 902, 1547
TseI GCWGC 7 cut(s) 614, 896, 1264, 1381, 1390, 1393, 1396
Tsp45I GTSAC 3 cut(s) 202, 902, 1547
TspDTI ATGAA 7 cut(s) 7, 645, 716, 744, 793, 818, 1308
TspRI CASTG 4 cut(s) 485, 907, 1073, 1204
Tth111I GACNNNGTC 1 cut(s) 208
VneI GTGCAC 1 cut(s) 407
VpaK11BI GGWCC 2 cut(s) 271, 280
XceI RCATGY 1 cut(s) 1066
XmnI GAANNNNTTC 2 cut(s) 666, 1469
XspI CTAG 1 cut(s) 585
ZraI GACGTC 1 cut(s) 358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.