Rw5G038060

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0012131
Physical Location & Seq
Forward (+)
67277737 .. 67279927
2191 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G038060.1

Sequence Viewer

Length: 1530 bp
ATGGCGGCCGAGAACGCACTGAAATCCAAAGAGGTCTCGGCGATGATCAAACAGGGCTTCATTTCCGATCAAACCCTCTCGTTCTCGCCGTCAAGATCCACCAATTCCAAGCTCCACTCCCCCAATTCCTCCCCCAACTCCAACTCCAAAACCCTATCCTCTCCTCCCTTCTCCCCCGCCGCGGCGCCGACTCAGCAATTGACTCGGCCGAGTCAGTCCCAGACCCTGTACGAGATGATGTCCGACGAGCAGCACCGGGATTCCAAGCACTCGGACCGGAATCTCCACCAGAAAGTCCACAAGCTCCTCGAAACGGCGCCGTTTCGGAACCCCAATTGGGGGGGCTGGTTTCTGGACGGGTTTAGAGTCTCAATGGATGTGCACAAGAGTGTTCTGGCTTCGAAAAGCCGGTTTTTCGCCGAAAAGCTTAGGAAAGATAGAGGGGTTTCACATTGTGTGGAGATTTCTGACTGTGATGATGTGGAGGTGTATGTGGAAACTGTGGTGTTGATGTACTGTGAGGATTTGAAGAAGAGGTTGATGGGTGAGGAGGTCTCCAGGGTTTTGGGTTTGCTAAAGGTCTCTGCGGCTCTCATGTTTGATGAGGGCATTGCCTCATGCTTGGAGTATTTGGAAGCGGTTCCGTGGTCCGAGGAGGAAGAGGAGAAAGTTAAATCTCAACTCGGTGAACTTCAGCTTCATGACTCGGCCAGTGATCAAGTTTTGCTCAGAGTATCCTCTGAACCATCCACGTCTGCTAGAGCGGATGAAATCTTATTGAGACTGCTCACTGGTGTTCTTCAAGCAAAAGATGATAGAGCTCGTCGAGAAATGAAGACTCTCATTTCCAGGTTGCTTAGAGAAGATGCAGCGAATGACGGCAATAGGCTTGATGTGTCTAAAGAAACCCTTTACAATCTTTGCCATAGATGCTTGAGTTCCCTTGTACTGTGCTTATCCGAAGCTACAGGAATGGATGAAAAGCGGGATCGCGGGGTATTGATGGCTGAGATAGCAAGAGAGGCTGATAACATGCAGTGGATTGTTGATATTATGGTAGACAAGAAAATGGGTGAAGATTTTGTGAAATTATGGGCGGATCAGAAGGAGCTTGCAGTCCTCCACTCAAAGATTCCGATCATGTACCGACATGAAATCAGCAGAATCACAGCTCAGCTATGCATCGCGATTGGGAGTAGACATTTGCTGGTGCCCAAAGACACAAGATTTTCTTTGCTTTCAACATGGCTGGAAGCTCTTTATGAGGACTTCGGATGGATGAGGAGGGCTTCGAGATCTGTTGACAAGAAACTTGTTGAAGAGGGTCTAAGCCAAACGATTCTTACACTTCCTTTGCATCAACAACAGGCTATAATGCTTAATTGGTTTGACCGGTTTCTAAACAAGGGAGATGACTGTCCCAACATTCAGAAGGCGTTTGAAGTTTGGTGGAGGAGAGCTTTCATCAAACATGTGGCAGAGCAGGAAAATCATAGGTTGCAAATAACTGTTTGTGATTATCCCAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

509

Amino Acids

58.09

Weight (kDa)

6.15

Isoelectric Point (pI)

50.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 256 - 490 4.1e-71 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60050
fragaria_vesca FvH4_3g34280
malus_domestica MD03G1106900.v1.1 MD11G1119600.v1.1
prunus_persica Prupe.6G089700_v2.0.a1
pyrus_communis pycom03g08630 pycom11g10090
rosa_chinensis RchiOBHm_Chr5g0061841 RchiOBHm_Chr5g0061851
rosa_laevigata RLG00000035510
rosa_multiflora Rmu_sc0004134.1_g000002 Rmu_sc0011641.1_g000016
rosa_roxburghii Rroxscaffold_1G00018890
rosa_rugosa Rorug05G0344800
rosa_samantha Rh5AG405400 Rh5BG418200 Rh5CG442700 Rh5DG432300
rosa_wichuraiana Rw5G038060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 184, 316, 1210
AccBSI CCGCTC 1 cut(s) 764
AccI GTMKAC 2 cut(s) 1059, 1198
AccII CGCG 3 cut(s) 182, 993, 1187
AclWI GGATC 3 cut(s) 90, 996, 1107
AcoI YGGCCR 3 cut(s) 6, 206, 708
AcuI CTGAAG 1 cut(s) 677
AcyI GRCGYC 2 cut(s) 185, 317
AdeI CACNNNGTG 1 cut(s) 455
AfaI GTAC 4 cut(s) 230, 515, 948, 1145
AfiI CCNNNNNNNGG 5 cut(s) 181, 313, 337, 338, 339
AflIII ACRYGT 1 cut(s) 1471
AgeI ACCGGT 1 cut(s) 1392
AgsI TTSAA 5 cut(s) 529, 803, 1242, 1319, 1442
AjiI CACGTC 1 cut(s) 753
AjnI CCWGG 2 cut(s) 557, 848
AleI CACNNNNGTG 1 cut(s) 387
Alw21I GWGCWC 2 cut(s) 384, 823
Alw26I GTCTC 5 cut(s) 40, 373, 559, 586, 775
Alw44I GTGCAC 1 cut(s) 380
AlwI GGATC 3 cut(s) 90, 996, 1107
AlwNI CAGNNNCTG 1 cut(s) 226
AoxI GGCC 3 cut(s) 6, 206, 708
ApaLI GTGCAC 1 cut(s) 380
ApeKI GCWGC 2 cut(s) 250, 869
AsiGI ACCGGT 1 cut(s) 1392
Asp700I GAANNNNTTC 1 cut(s) 639
AspLEI GCGC 2 cut(s) 187, 319
AspS9I GGNCC 2 cut(s) 274, 648
AsuC2I CCSGG 1 cut(s) 257
AsuHPI GGTGA 3 cut(s) 557, 698, 1085
AsuII TTCGAA 1 cut(s) 401
AvaII GGWCC 2 cut(s) 274, 648
BaeGI GKGCMC 2 cut(s) 384, 1215
BanI GGYRCC 3 cut(s) 184, 316, 1210
BanII GRGCYC 1 cut(s) 823
BbsI GAAGAC 1 cut(s) 842
Bbv12I GWGCWC 2 cut(s) 384, 823
BbvI GCAGC 2 cut(s) 262, 881
BccI CCATC 4 cut(s) 535, 754, 997, 1269
BceAI ACGGC 4 cut(s) 73, 304, 330, 895
BcgI CGANNNNNNTGC 2 cut(s) 185, 219
BciT130I CCWGG 2 cut(s) 559, 850
BciVI GTATCC 1 cut(s) 745
BclI TGATCA 2 cut(s) 45, 715
BcnI CCSGG 1 cut(s) 257
BcoDI GTCTC 5 cut(s) 40, 373, 559, 586, 775
BfaI CTAG 1 cut(s) 759
BfmI CTRYAG 1 cut(s) 966
BfoI RGCGCY 2 cut(s) 188, 320
BfuI GTATCC 1 cut(s) 745
BglII AGATCT 1 cut(s) 1295
BisI GCNGC 6 cut(s) 6, 180, 183, 251, 588, 870
BlpI GCTNAGC 1 cut(s) 1173
BlsI GCNGC 6 cut(s) 7, 181, 184, 252, 589, 871
Bme1390I CCNGG 3 cut(s) 257, 559, 850
Bme18I GGWCC 2 cut(s) 274, 648
BmgBI CACGTC 1 cut(s) 753
BmgT120I GGNCC 2 cut(s) 274, 648
BmiI GGNNCC 5 cut(s) 186, 318, 329, 642, 1212
BmrFI CCNGG 3 cut(s) 257, 559, 850
BmrI ACTGGG 1 cut(s) 1518
BmsI GCATC 4 cut(s) 856, 920, 1191, 1366
BmuI ACTGGG 1 cut(s) 1518
BpiI GAAGAC 1 cut(s) 842
BplI GAGNNNNNCTC 2 cut(s) 539, 571
BpmI CTGGAG 1 cut(s) 541
Bpu10I CCTNAGC 1 cut(s) 428
Bpu1102I GCTNAGC 1 cut(s) 1173
Bpu14I TTCGAA 1 cut(s) 401
BpuEI CTTGAG 1 cut(s) 955
BpuMI CCSGG 1 cut(s) 257
BsaBI GATNNNNATC 1 cut(s) 1136
BsaHI GRCGYC 2 cut(s) 185, 317
BsaI GGTCTC 3 cut(s) 40, 559, 586
BsaJI CCNNGG 4 cut(s) 180, 558, 644, 651
BsaWI WCCGGW 2 cut(s) 276, 1392
BsaXI ACNNNNNCTCC 2 cut(s) 128, 158
Bsc4I CCNNNNNNNGG 5 cut(s) 181, 313, 337, 338, 339
Bse118I RCCGGY 2 cut(s) 408, 1392
Bse1I ACTGG 3 cut(s) 711, 796, 1524
Bse3DI GCAATG 1 cut(s) 609
Bse8I GATNNNNATC 1 cut(s) 1136
BseBI CCWGG 2 cut(s) 559, 850
BseDI CCNNGG 4 cut(s) 180, 558, 644, 651
BseGI GGATG 6 cut(s) 382, 746, 772, 982, 1280, 1284
BseJI GATNNNNATC 1 cut(s) 1136
BseLI CCNNNNNNNGG 5 cut(s) 181, 313, 337, 338, 339
BseMI GCAATG 1 cut(s) 609
BseMII CTCAG 4 cut(s) 206, 742, 999, 1187
BseNI ACTGG 3 cut(s) 711, 796, 1524
BseRI GAGGAG 7 cut(s) 153, 296, 563, 668, 677, 1297, 1468
BseSI GKGCMC 2 cut(s) 384, 1215
BseX3I CGGCCG 2 cut(s) 6, 206
BseXI GCAGC 2 cut(s) 262, 881
Bsh1236I CGCG 3 cut(s) 182, 993, 1187
Bsh1285I CGRYCG 2 cut(s) 9, 209
BshFI GGCC 3 cut(s) 8, 208, 710
BshNI GGYRCC 3 cut(s) 184, 316, 1210
BshTI ACCGGT 1 cut(s) 1392
BsiEI CGRYCG 2 cut(s) 9, 209
BsiHKAI GWGCWC 2 cut(s) 384, 823
BsiSI CCGG 4 cut(s) 256, 277, 409, 1393
BslFI GGGAC 2 cut(s) 202, 1404
BslI CCNNNNNNNGG 5 cut(s) 181, 313, 337, 338, 339
BsmAI GTCTC 5 cut(s) 40, 373, 559, 586, 775
BsmFI GGGAC 2 cut(s) 202, 1404
BsnI GGCC 3 cut(s) 8, 208, 710
Bso31I GGTCTC 3 cut(s) 40, 559, 586
Bsp119I TTCGAA 1 cut(s) 401
Bsp1286I GDGCHC 3 cut(s) 384, 823, 1215
Bsp143I GATC 8 cut(s) 45, 67, 95, 715, 988, 1099, 1137, 1295
Bsp1720I GCTNAGC 1 cut(s) 1173
Bsp68I TCGCGA 1 cut(s) 1187
BspANI GGCC 3 cut(s) 8, 208, 710
BspCNI CTCAG 4 cut(s) 205, 741, 1000, 1186
BspFNI CGCG 3 cut(s) 182, 993, 1187
BspHI TCATGA 1 cut(s) 700
BspLI GGNNCC 5 cut(s) 186, 318, 329, 642, 1212
BspPI GGATC 3 cut(s) 90, 996, 1107
BspT104I TTCGAA 1 cut(s) 401
BspT107I GGYRCC 3 cut(s) 184, 316, 1210
BspTNI GGTCTC 3 cut(s) 40, 559, 586
BsrBI CCGCTC 1 cut(s) 764
BsrDI GCAATG 1 cut(s) 609
BsrFI RCCGGY 2 cut(s) 408, 1392
BsrI ACTGG 3 cut(s) 711, 796, 1524
BssAI RCCGGY 2 cut(s) 408, 1392
BssECI CCNNGG 4 cut(s) 180, 558, 644, 651
BssMI GATC 8 cut(s) 45, 67, 95, 715, 988, 1099, 1137, 1295
BssNI GRCGYC 2 cut(s) 185, 317
Bst2UI CCWGG 2 cut(s) 559, 850
Bst4CI ACNGT 6 cut(s) 473, 502, 518, 951, 1418, 1510
Bst6I CTCTTC 3 cut(s) 527, 654, 1314
BstACI GRCGYC 2 cut(s) 185, 317
BstBI TTCGAA 1 cut(s) 401
BstC8I GCNNGC 1 cut(s) 1113
BstDEI CTNAG 7 cut(s) 192, 428, 728, 857, 1008, 1173, 1328
BstDSI CCRYGG 2 cut(s) 180, 644
BstF5I GGATG 6 cut(s) 382, 746, 772, 982, 1280, 1284
BstFNI CGCG 3 cut(s) 182, 993, 1187
BstH2I RGCGCY 2 cut(s) 188, 320
BstHHI GCGC 2 cut(s) 187, 319
BstKTI GATC 8 cut(s) 48, 70, 98, 718, 991, 1102, 1140, 1298
BstMAI GTCTC 5 cut(s) 40, 373, 559, 586, 775
BstMBI GATC 8 cut(s) 45, 67, 95, 715, 988, 1099, 1137, 1295
BstMCI CGRYCG 2 cut(s) 9, 209
BstMWI GCNNNNNNNGC 5 cut(s) 14, 193, 930, 1013, 1022
BstNI CCWGG 2 cut(s) 559, 850
BstNSI RCATGY 2 cut(s) 1036, 1475
BstSCI CCNGG 3 cut(s) 255, 557, 848
BstSFI CTRYAG 1 cut(s) 966
BstSLI GKGCMC 2 cut(s) 384, 1215
BstUI CGCG 3 cut(s) 182, 993, 1187
BstV1I GCAGC 2 cut(s) 262, 881
BstV2I GAAGAC 1 cut(s) 842
BstX2I RGATCY 2 cut(s) 95, 1295
BstXI CCANNNNNNTGG 1 cut(s) 565
BstYI RGATCY 2 cut(s) 95, 1295
BstZI CGGCCG 2 cut(s) 6, 206
BsuI GTATCC 1 cut(s) 745
BsuRI GGCC 3 cut(s) 8, 208, 710
BtgI CCRYGG 2 cut(s) 180, 644
BtgZI GCGATG 2 cut(s) 56, 1168
BtrI CACGTC 1 cut(s) 753
BtsCI GGATG 6 cut(s) 382, 746, 772, 982, 1280, 1284
BtsI GCAGTG 1 cut(s) 1043
BtsIMutI CAGTG 4 cut(s) 17, 718, 789, 1043
BtuMI TCGCGA 1 cut(s) 1187
Cac8I GCNNGC 1 cut(s) 1113
CaiI CAGNNNCTG 1 cut(s) 226
CciI TCATGA 1 cut(s) 700
CfoI GCGC 2 cut(s) 187, 319
Cfr10I RCCGGY 2 cut(s) 408, 1392
Cfr13I GGNCC 2 cut(s) 274, 648
Cfr42I CCGCGG 1 cut(s) 183
CpoI CGGWCCG 1 cut(s) 274
Csp6I GTAC 4 cut(s) 229, 514, 947, 1144
CspAI ACCGGT 1 cut(s) 1392
CspI CGGWCCG 1 cut(s) 274
CviAII CATG 8 cut(s) 595, 618, 701, 1033, 1141, 1151, 1245, 1472
CviQI GTAC 4 cut(s) 229, 514, 947, 1144
DdeI CTNAG 7 cut(s) 192, 428, 728, 857, 1008, 1173, 1328
DinI GGCGCC 2 cut(s) 186, 318
DpnI GATC 8 cut(s) 47, 69, 97, 717, 990, 1101, 1139, 1297
DpnII GATC 8 cut(s) 45, 67, 95, 715, 988, 1099, 1137, 1295
DraIII CACNNNGTG 1 cut(s) 455
EaeI YGGCCR 3 cut(s) 6, 206, 708
EagI CGGCCG 2 cut(s) 6, 206
Eam1104I CTCTTC 3 cut(s) 527, 654, 1314
EarI CTCTTC 3 cut(s) 527, 654, 1314
EciI GGCGGA 1 cut(s) 1112
Ecl136II GAGCTC 1 cut(s) 821
EclXI CGGCCG 2 cut(s) 6, 206
Eco24I GRGCYC 1 cut(s) 823
Eco31I GGTCTC 3 cut(s) 40, 559, 586
Eco47I GGWCC 2 cut(s) 274, 648
Eco52I CGGCCG 2 cut(s) 6, 206
Eco53kI GAGCTC 1 cut(s) 821
Eco57I CTGAAG 1 cut(s) 677
EcoICRI GAGCTC 1 cut(s) 821
EcoRII CCWGG 2 cut(s) 557, 848
EcoT22I ATGCAT 1 cut(s) 1184
EcoT38I GRGCYC 1 cut(s) 823
EgeI GGCGCC 2 cut(s) 186, 318
EheI GGCGCC 2 cut(s) 186, 318
FaeI CATG 8 cut(s) 598, 621, 704, 1036, 1144, 1154, 1248, 1475
FalI AAGNNNNNCTT 4 cut(s) 894, 926, 1216, 1248
FaqI GGGAC 2 cut(s) 202, 1404
FatI CATG 8 cut(s) 594, 617, 700, 1032, 1140, 1150, 1244, 1471
FauI CCCGC 3 cut(s) 184, 978, 986
FbaI TGATCA 2 cut(s) 45, 715
FblI GTMKAC 2 cut(s) 1059, 1198
Fnu4HI GCNGC 6 cut(s) 6, 180, 183, 251, 588, 870
FokI GGATG 6 cut(s) 389, 733, 779, 989, 1287, 1291
FriOI GRGCYC 1 cut(s) 823
Fsp4HI GCNGC 6 cut(s) 6, 180, 183, 251, 588, 870
FspBI CTAG 1 cut(s) 759
GlaI GCGC 2 cut(s) 186, 318
GluI GCNGC 6 cut(s) 6, 180, 183, 251, 588, 870
GsuI CTGGAG 1 cut(s) 541
HaeII RGCGCY 2 cut(s) 188, 320
HaeIII GGCC 3 cut(s) 8, 208, 710
HapII CCGG 4 cut(s) 256, 277, 409, 1393
HhaI GCGC 2 cut(s) 187, 319
Hin1I GRCGYC 2 cut(s) 185, 317
Hin1II CATG 8 cut(s) 598, 621, 704, 1036, 1144, 1154, 1248, 1475
Hin6I GCGC 2 cut(s) 185, 317
HinP1I GCGC 2 cut(s) 185, 317
HincII GTYRAC 1 cut(s) 1303
HindII GTYRAC 1 cut(s) 1303
HindIII AAGCTT 1 cut(s) 425
HpaII CCGG 4 cut(s) 256, 277, 409, 1393
HphI GGTGA 3 cut(s) 557, 698, 1085
Hpy166II GTNNAC 6 cut(s) 298, 382, 689, 1060, 1199, 1303
Hpy188III TCNNGA 6 cut(s) 93, 353, 701, 827, 1186, 1293
Hpy8I GTNNAC 6 cut(s) 298, 382, 689, 1060, 1199, 1303
Hpy99I CGWCG 2 cut(s) 248, 828
HpyAV CCTTC 3 cut(s) 178, 1099, 1426
HpyCH4III ACNGT 6 cut(s) 473, 502, 518, 951, 1418, 1510
HpyCH4IV ACGT 1 cut(s) 752
HpyCH4V TGCA 7 cut(s) 382, 869, 1036, 1115, 1182, 1357, 1501
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 193, 930, 1013, 1022
HpyF3I CTNAG 7 cut(s) 192, 428, 728, 857, 1008, 1173, 1328
HpySE526I ACGT 1 cut(s) 752
Hsp92I GRCGYC 2 cut(s) 185, 317
Hsp92II CATG 8 cut(s) 598, 621, 704, 1036, 1144, 1154, 1248, 1475
HspAI GCGC 2 cut(s) 185, 317
KasI GGCGCC 2 cut(s) 184, 316
Ksp22I TGATCA 2 cut(s) 45, 715
KspI CCGCGG 1 cut(s) 183
Kzo9I GATC 8 cut(s) 45, 67, 95, 715, 988, 1099, 1137, 1295
LmnI GCTCC 3 cut(s) 117, 309, 1108
Lsp1109I GCAGC 2 cut(s) 262, 881
LweI GCATC 4 cut(s) 856, 920, 1191, 1366
MaeI CTAG 1 cut(s) 759
MaeII ACGT 1 cut(s) 752
MalI GATC 8 cut(s) 47, 69, 97, 717, 990, 1101, 1139, 1297
MbiI CCGCTC 1 cut(s) 764
MboI GATC 8 cut(s) 45, 67, 95, 715, 988, 1099, 1137, 1295
MboII GAAGA 8 cut(s) 541, 544, 671, 791, 847, 875, 1088, 1331
MfeI CAATTG 2 cut(s) 197, 334
MflI RGATCY 2 cut(s) 95, 1295
MhlI GDGCHC 3 cut(s) 384, 823, 1215
MluCI AATT 6 cut(s) 103, 124, 197, 334, 1088, 1381
Mly113I GGCGCC 2 cut(s) 185, 317
MlyI GAGTC 6 cut(s) 184, 196, 220, 375, 698, 832
MmeI TCCRAC 2 cut(s) 165, 267
Mph1103I ATGCAT 1 cut(s) 1184
MroXI GAANNNNTTC 1 cut(s) 639
MseI TTAA 2 cut(s) 672, 1380
MslI CAYNNNNRTG 1 cut(s) 387
MspA1I CMGCKG 1 cut(s) 182
MspI CCGG 4 cut(s) 256, 277, 409, 1393
MspR9I CCNGG 3 cut(s) 257, 559, 850
MunI CAATTG 2 cut(s) 197, 334
MvaI CCWGG 2 cut(s) 559, 850
MvnI CGCG 3 cut(s) 182, 993, 1187
MwoI GCNNNNNNNGC 5 cut(s) 14, 193, 930, 1013, 1022
NarI GGCGCC 2 cut(s) 185, 317
NciI CCSGG 1 cut(s) 257
NdeII GATC 8 cut(s) 45, 67, 95, 715, 988, 1099, 1137, 1295
NlaIII CATG 8 cut(s) 598, 621, 704, 1036, 1144, 1154, 1248, 1475
NlaIV GGNNCC 5 cut(s) 186, 318, 329, 642, 1212
NmeAIII GCCGAG 5 cut(s) 17, 34, 184, 234, 686
NruI TCGCGA 1 cut(s) 1187
NsiI ATGCAT 1 cut(s) 1184
NspI RCATGY 2 cut(s) 1036, 1475
NspV TTCGAA 1 cut(s) 401
OliI CACNNNNGTG 1 cut(s) 387
PagI TCATGA 1 cut(s) 700
PciI ACATGT 1 cut(s) 1471
PcsI WCGNNNNNNNCGW 1 cut(s) 86
PdmI GAANNNNTTC 1 cut(s) 639
PfeI GAWTC 5 cut(s) 260, 280, 1132, 1164, 1339
PinAI ACCGGT 1 cut(s) 1392
PkrI GCNGC 6 cut(s) 7, 181, 184, 252, 589, 871
PleI GAGTC 6 cut(s) 184, 196, 219, 374, 698, 832
PluTI GGCGCC 2 cut(s) 188, 320
PpsI GAGTC 6 cut(s) 184, 196, 219, 374, 698, 832
PscI ACATGT 1 cut(s) 1471
Psp124BI GAGCTC 1 cut(s) 823
Psp6I CCWGG 2 cut(s) 557, 848
PspGI CCWGG 2 cut(s) 557, 848
PspN4I GGNNCC 5 cut(s) 186, 318, 329, 642, 1212
PspPI GGNCC 2 cut(s) 274, 648
PstNI CAGNNNCTG 1 cut(s) 226
PsuI RGATCY 2 cut(s) 95, 1295
RruI TCGCGA 1 cut(s) 1187
RsaI GTAC 4 cut(s) 230, 515, 948, 1145
RsaNI GTAC 4 cut(s) 229, 514, 947, 1144
RseI CAYNNNNRTG 1 cut(s) 387
Rsr2I CGGWCCG 1 cut(s) 274
RsrII CGGWCCG 1 cut(s) 274
SacI GAGCTC 1 cut(s) 823
SacII CCGCGG 1 cut(s) 183
SaqAI TTAA 2 cut(s) 672, 1380
SatI GCNGC 6 cut(s) 6, 180, 183, 251, 588, 870
Sau3AI GATC 8 cut(s) 45, 67, 95, 715, 988, 1099, 1137, 1295
Sau96I GGNCC 2 cut(s) 274, 648
SchI GAGTC 6 cut(s) 184, 196, 220, 375, 698, 832
ScrFI CCNGG 3 cut(s) 257, 559, 850
SduI GDGCHC 3 cut(s) 384, 823, 1215
SfaNI GCATC 4 cut(s) 856, 920, 1191, 1366
SfcI CTRYAG 1 cut(s) 966
SfoI GGCGCC 2 cut(s) 186, 318
Sfr303I CCGCGG 1 cut(s) 183
SfuI TTCGAA 1 cut(s) 401
SgrBI CCGCGG 1 cut(s) 183
SinI GGWCC 2 cut(s) 274, 648
SmiMI CAYNNNNRTG 1 cut(s) 387
SmlI CTYRAG 1 cut(s) 934
SmoI CTYRAG 1 cut(s) 934
Sse9I AATT 6 cut(s) 103, 124, 197, 334, 1088, 1381
SspDI GGCGCC 2 cut(s) 184, 316
SspMI CTAG 1 cut(s) 759
SstI GAGCTC 1 cut(s) 823
StyD4I CCNGG 3 cut(s) 255, 557, 848
TaaI ACNGT 6 cut(s) 473, 502, 518, 951, 1418, 1510
TaiI ACGT 1 cut(s) 755
TaqI TCGA 4 cut(s) 309, 401, 826, 1292
TasI AATT 6 cut(s) 103, 124, 197, 334, 1088, 1381
TatI WGTACW 2 cut(s) 513, 946
TauI GCSGC 4 cut(s) 8, 182, 185, 590
TfiI GAWTC 5 cut(s) 260, 280, 1132, 1164, 1339
Tru1I TTAA 2 cut(s) 672, 1380
Tru9I TTAA 2 cut(s) 672, 1380
TscAI CASTG 4 cut(s) 24, 718, 796, 1043
TseI GCWGC 2 cut(s) 250, 869
TspDTI ATGAA 7 cut(s) 49, 689, 783, 848, 993, 1167, 1453
TspGWI ACGGA 1 cut(s) 633
TspRI CASTG 4 cut(s) 24, 718, 796, 1043
VneI GTGCAC 1 cut(s) 380
VpaK11BI GGWCC 2 cut(s) 274, 648
XceI RCATGY 2 cut(s) 1036, 1475
XmiI GTMKAC 2 cut(s) 1059, 1198
XmnI GAANNNNTTC 1 cut(s) 639
XspI CTAG 1 cut(s) 759
Zsp2I ATGCAT 1 cut(s) 1184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.