Rh5DG432300

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0012131
Physical Location & Seq
Forward (+)
69110094 .. 69112775
2682 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG432300.1

Sequence Viewer

Length: 1560 bp
ATGGCGGCCGAGAACGCACTGAAATCCAAAGAGGTCTCGGCGATGATCAAACAGGGCTTCATTTCCGATCAAACCCTCTCGTTCTCGCCGTCAAGATCCACCAACTCCAAGCTCCACTCCCCCAACTCCTCCCCCAACTCCAACTCCAAAACCCTATCCTCTCCTCCCTTCTCCCCCGCCGCGGCGCCGACTCAGCAATTGACTCGGCCGAGTCAGTCCCAGACCCTGTACGAGATGATGTCCGACGAGCAGCACCGGGATTCCAAGCACTCGGACCGGAATCTCCACCAGAAAGTCCACAAGCTCCTCGAAACGGCGCCGTTTCGGAACCCCAATTGGGGGGGGCTGGTTTCTGGTGATGTGAGGCTCACGGTGGTGGCCAAGGACGGGTTTAGAGTCTCAATGGATGTGCACAAGAGTGTTCTGGCTTCGAAAAGCCGGTTTTTCGCCGAAAAGCTTAGGAAAGATAGAGGGGTTTCACATTGTGTGGAGATTTCTGACTGTGATGATGTGGAGGTGTATGTGGAAACTGTGGTGTTGATGTACTGTGAGGATTTGAAGAAGAGGTTGATGGGTGAGGAGGTCTCCAGGGTTTTGGGTTTGCTAAAGGTCTCTGCGGCTCTCATGTTTGATGAGGGCATTGCGTCATGCTTGGAGTATTTGGAAGCGGTTCCGTGGTCCGAGGAGGAAGAGGAGAAAGTTAAATCTCAACTCGGTGAACTTCAGCTTCATGACTCGGCCAGTGATCAAGTTTTGCTCAGAGTATCCTCTGAACCATCCACGTCTGCTAGAGCGGATGAAATCTTATTGAGACTGCTCACTGGTGTTCTTCAAGCAAAAGATGATAGAGCTCGTCGAGAAATGAAGACTCTCATTTCCAGGTTGCTTAGAGAAGATGCAGCGAATGACGGCAATAGGCTTGATGTGTCTAAAGAAACCCTTTACAATCTTTGCCATAGATGCTTGAGTTCCCTTGTACTGTGCTTATCCGAAGCTACAGGCATGGATGAAAAGCGGGATCGCGGGGTATTGATGGCTGAGATAGCAAGAGAGGCTGATAACATGCAGTGGATTGTTGATATTATGGTAGACAAGAAAATGGGTGAAGATTTTGTGAAATTATGGGCGGATCAGAAGGAGCTTGCAGTCCTCCACTCAAAGATTCCGATCATGTACCGACATGAAATCAGCAGAATCACAGCTCAGCTATGCATCGCGATTGGGAGTAGACATTTGCTGGTGCCCAAAGACACAAGATTTTCTTTGCTTTCGACATGGCTGGAAGCTCTTTATGAGGACTTCGGATGGATGAGGAGGGCTTCGAGATCTGTTGACAAGAAACTTGTTGAAGAGGGTCTAAGCCAAACGATTCTTACACTTCCTTTGCATCAACAACAGGCTATAATGCTTAATTGGTTTGACCGGTTTCTAAACAAGGGAGATGACTGTCCCAACATTCAGAAGGCGTTTGAAGTTTGGTGGAGGAGAGCTTTCATCAAACATGTGGCAGAGCAGGAAAATCATAGGTTGCAAATAACTGTTTGTGATTATCCCAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

519

Amino Acids

58.98

Weight (kDa)

6.24

Isoelectric Point (pI)

49.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 266 - 500 4.3e-71 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60050
fragaria_vesca FvH4_3g34280
malus_domestica MD03G1106900.v1.1 MD11G1119600.v1.1
prunus_persica Prupe.6G089700_v2.0.a1
pyrus_communis pycom03g08630 pycom11g10090
rosa_chinensis RchiOBHm_Chr5g0061841 RchiOBHm_Chr5g0061851
rosa_laevigata RLG00000035510
rosa_multiflora Rmu_sc0004134.1_g000002 Rmu_sc0011641.1_g000016
rosa_roxburghii Rroxscaffold_1G00018890
rosa_rugosa Rorug05G0344800
rosa_samantha Rh5AG405400 Rh5BG418200 Rh5CG442700 Rh5DG432300
rosa_wichuraiana Rw5G038060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 184, 316, 1240
AccBSI CCGCTC 1 cut(s) 794
AccI GTMKAC 2 cut(s) 1089, 1228
AccII CGCG 3 cut(s) 182, 1023, 1217
AclWI GGATC 3 cut(s) 90, 1026, 1137
AcoI YGGCCR 4 cut(s) 6, 206, 378, 738
AcuI CTGAAG 1 cut(s) 707
AcyI GRCGYC 2 cut(s) 185, 317
AdeI CACNNNGTG 1 cut(s) 485
AfaI GTAC 4 cut(s) 230, 545, 978, 1175
AfiI CCNNNNNNNGG 6 cut(s) 181, 313, 337, 338, 339, 387
AflIII ACRYGT 1 cut(s) 1501
AgeI ACCGGT 1 cut(s) 1422
AgsI TTSAA 4 cut(s) 559, 833, 1349, 1472
AjiI CACGTC 1 cut(s) 783
AjnI CCWGG 2 cut(s) 587, 878
AleI CACNNNNGTG 2 cut(s) 374, 417
Alw21I GWGCWC 2 cut(s) 414, 853
Alw26I GTCTC 5 cut(s) 40, 403, 589, 616, 805
Alw44I GTGCAC 1 cut(s) 410
AlwI GGATC 3 cut(s) 90, 1026, 1137
AlwNI CAGNNNCTG 1 cut(s) 226
AoxI GGCC 4 cut(s) 6, 206, 378, 738
ApaLI GTGCAC 1 cut(s) 410
ApeKI GCWGC 2 cut(s) 250, 899
AsiGI ACCGGT 1 cut(s) 1422
Asp700I GAANNNNTTC 1 cut(s) 669
AspLEI GCGC 2 cut(s) 187, 319
AspS9I GGNCC 2 cut(s) 274, 678
AsuC2I CCSGG 1 cut(s) 257
AsuHPI GGTGA 4 cut(s) 368, 587, 728, 1115
AsuII TTCGAA 1 cut(s) 431
AvaII GGWCC 2 cut(s) 274, 678
BaeGI GKGCMC 2 cut(s) 414, 1245
BalI TGGCCA 1 cut(s) 380
BanI GGYRCC 3 cut(s) 184, 316, 1240
BanII GRGCYC 1 cut(s) 853
BbsI GAAGAC 1 cut(s) 872
Bbv12I GWGCWC 2 cut(s) 414, 853
BbvI GCAGC 2 cut(s) 262, 911
BccI CCATC 4 cut(s) 565, 784, 1027, 1299
BceAI ACGGC 4 cut(s) 73, 304, 330, 925
BcgI CGANNNNNNTGC 2 cut(s) 185, 219
BciT130I CCWGG 2 cut(s) 589, 880
BciVI GTATCC 1 cut(s) 775
BclI TGATCA 2 cut(s) 45, 745
BcnI CCSGG 1 cut(s) 257
BcoDI GTCTC 5 cut(s) 40, 403, 589, 616, 805
BfaI CTAG 1 cut(s) 789
BfmI CTRYAG 1 cut(s) 996
BfoI RGCGCY 2 cut(s) 188, 320
BfuI GTATCC 1 cut(s) 775
BglII AGATCT 1 cut(s) 1325
BisI GCNGC 6 cut(s) 6, 180, 183, 251, 618, 900
BlpI GCTNAGC 1 cut(s) 1203
BlsI GCNGC 6 cut(s) 7, 181, 184, 252, 619, 901
Bme1390I CCNGG 3 cut(s) 257, 589, 880
Bme18I GGWCC 2 cut(s) 274, 678
BmgBI CACGTC 1 cut(s) 783
BmgT120I GGNCC 2 cut(s) 274, 678
BmiI GGNNCC 5 cut(s) 186, 318, 329, 672, 1242
BmrFI CCNGG 3 cut(s) 257, 589, 880
BmrI ACTGGG 1 cut(s) 1548
BmsI GCATC 4 cut(s) 886, 950, 1221, 1396
BmuI ACTGGG 1 cut(s) 1548
BpiI GAAGAC 1 cut(s) 872
BplI GAGNNNNNCTC 2 cut(s) 569, 601
BpmI CTGGAG 1 cut(s) 571
Bpu10I CCTNAGC 1 cut(s) 458
Bpu1102I GCTNAGC 1 cut(s) 1203
Bpu14I TTCGAA 1 cut(s) 431
BpuEI CTTGAG 1 cut(s) 985
BpuMI CCSGG 1 cut(s) 257
BsaBI GATNNNNATC 1 cut(s) 1166
BsaHI GRCGYC 2 cut(s) 185, 317
BsaI GGTCTC 3 cut(s) 40, 589, 616
BsaJI CCNNGG 5 cut(s) 180, 381, 588, 674, 681
BsaWI WCCGGW 2 cut(s) 276, 1422
BsaXI ACNNNNNCTCC 2 cut(s) 128, 158
Bsc4I CCNNNNNNNGG 6 cut(s) 181, 313, 337, 338, 339, 387
Bse118I RCCGGY 2 cut(s) 438, 1422
Bse1I ACTGG 3 cut(s) 741, 826, 1554
Bse3DI GCAATG 1 cut(s) 639
Bse8I GATNNNNATC 1 cut(s) 1166
BseBI CCWGG 2 cut(s) 589, 880
BseDI CCNNGG 5 cut(s) 180, 381, 588, 674, 681
BseGI GGATG 6 cut(s) 412, 776, 802, 1012, 1310, 1314
BseJI GATNNNNATC 1 cut(s) 1166
BseLI CCNNNNNNNGG 6 cut(s) 181, 313, 337, 338, 339, 387
BseMI GCAATG 1 cut(s) 639
BseMII CTCAG 4 cut(s) 206, 772, 1029, 1217
BseNI ACTGG 3 cut(s) 741, 826, 1554
BseRI GAGGAG 8 cut(s) 118, 153, 296, 593, 698, 707, 1327, 1498
BseSI GKGCMC 2 cut(s) 414, 1245
BseX3I CGGCCG 2 cut(s) 6, 206
BseXI GCAGC 2 cut(s) 262, 911
Bsh1236I CGCG 3 cut(s) 182, 1023, 1217
Bsh1285I CGRYCG 2 cut(s) 9, 209
BshFI GGCC 4 cut(s) 8, 208, 380, 740
BshNI GGYRCC 3 cut(s) 184, 316, 1240
BshTI ACCGGT 1 cut(s) 1422
BsiEI CGRYCG 2 cut(s) 9, 209
BsiHKAI GWGCWC 2 cut(s) 414, 853
BsiSI CCGG 4 cut(s) 256, 277, 439, 1423
BslFI GGGAC 2 cut(s) 202, 1434
BslI CCNNNNNNNGG 6 cut(s) 181, 313, 337, 338, 339, 387
BsmAI GTCTC 5 cut(s) 40, 403, 589, 616, 805
BsmFI GGGAC 2 cut(s) 202, 1434
BsnI GGCC 4 cut(s) 8, 208, 380, 740
Bso31I GGTCTC 3 cut(s) 40, 589, 616
Bsp119I TTCGAA 1 cut(s) 431
Bsp1286I GDGCHC 3 cut(s) 414, 853, 1245
Bsp143I GATC 8 cut(s) 45, 67, 95, 745, 1018, 1129, 1167, 1325
Bsp1720I GCTNAGC 1 cut(s) 1203
Bsp68I TCGCGA 1 cut(s) 1217
BspANI GGCC 4 cut(s) 8, 208, 380, 740
BspCNI CTCAG 4 cut(s) 205, 771, 1030, 1216
BspFNI CGCG 3 cut(s) 182, 1023, 1217
BspHI TCATGA 1 cut(s) 730
BspLI GGNNCC 5 cut(s) 186, 318, 329, 672, 1242
BspPI GGATC 3 cut(s) 90, 1026, 1137
BspT104I TTCGAA 1 cut(s) 431
BspT107I GGYRCC 3 cut(s) 184, 316, 1240
BspTNI GGTCTC 3 cut(s) 40, 589, 616
BsrBI CCGCTC 1 cut(s) 794
BsrDI GCAATG 1 cut(s) 639
BsrFI RCCGGY 2 cut(s) 438, 1422
BsrI ACTGG 3 cut(s) 741, 826, 1554
BssAI RCCGGY 2 cut(s) 438, 1422
BssECI CCNNGG 5 cut(s) 180, 381, 588, 674, 681
BssMI GATC 8 cut(s) 45, 67, 95, 745, 1018, 1129, 1167, 1325
BssNI GRCGYC 2 cut(s) 185, 317
BssT1I CCWWGG 1 cut(s) 381
Bst2UI CCWGG 2 cut(s) 589, 880
Bst4CI ACNGT 7 cut(s) 373, 503, 532, 548, 981, 1448, 1540
Bst6I CTCTTC 3 cut(s) 557, 684, 1344
BstACI GRCGYC 2 cut(s) 185, 317
BstBI TTCGAA 1 cut(s) 431
BstC8I GCNNGC 1 cut(s) 1143
BstDEI CTNAG 7 cut(s) 192, 458, 758, 887, 1038, 1203, 1358
BstDSI CCRYGG 2 cut(s) 180, 674
BstF5I GGATG 6 cut(s) 412, 776, 802, 1012, 1310, 1314
BstFNI CGCG 3 cut(s) 182, 1023, 1217
BstH2I RGCGCY 2 cut(s) 188, 320
BstHHI GCGC 2 cut(s) 187, 319
BstKTI GATC 8 cut(s) 48, 70, 98, 748, 1021, 1132, 1170, 1328
BstMAI GTCTC 5 cut(s) 40, 403, 589, 616, 805
BstMBI GATC 8 cut(s) 45, 67, 95, 745, 1018, 1129, 1167, 1325
BstMCI CGRYCG 2 cut(s) 9, 209
BstMWI GCNNNNNNNGC 5 cut(s) 14, 193, 960, 1043, 1052
BstNI CCWGG 2 cut(s) 589, 880
BstNSI RCATGY 2 cut(s) 1066, 1505
BstSCI CCNGG 3 cut(s) 255, 587, 878
BstSFI CTRYAG 1 cut(s) 996
BstSLI GKGCMC 2 cut(s) 414, 1245
BstUI CGCG 3 cut(s) 182, 1023, 1217
BstV1I GCAGC 2 cut(s) 262, 911
BstV2I GAAGAC 1 cut(s) 872
BstX2I RGATCY 2 cut(s) 95, 1325
BstXI CCANNNNNNTGG 1 cut(s) 595
BstYI RGATCY 2 cut(s) 95, 1325
BstZI CGGCCG 2 cut(s) 6, 206
BsuI GTATCC 1 cut(s) 775
BsuRI GGCC 4 cut(s) 8, 208, 380, 740
BtgI CCRYGG 2 cut(s) 180, 674
BtgZI GCGATG 2 cut(s) 56, 1198
BtrI CACGTC 1 cut(s) 783
BtsCI GGATG 6 cut(s) 412, 776, 802, 1012, 1310, 1314
BtsI GCAGTG 1 cut(s) 1073
BtsIMutI CAGTG 4 cut(s) 17, 748, 819, 1073
BtuMI TCGCGA 1 cut(s) 1217
Cac8I GCNNGC 1 cut(s) 1143
CaiI CAGNNNCTG 1 cut(s) 226
CciI TCATGA 1 cut(s) 730
CfoI GCGC 2 cut(s) 187, 319
Cfr10I RCCGGY 2 cut(s) 438, 1422
Cfr13I GGNCC 2 cut(s) 274, 678
Cfr42I CCGCGG 1 cut(s) 183
CpoI CGGWCCG 1 cut(s) 274
CseI GACGC 1 cut(s) 633
Csp6I GTAC 4 cut(s) 229, 544, 977, 1174
CspAI ACCGGT 1 cut(s) 1422
CspI CGGWCCG 1 cut(s) 274
CviAII CATG 9 cut(s) 625, 648, 731, 1003, 1063, 1171, 1181, 1275, 1502
CviQI GTAC 4 cut(s) 229, 544, 977, 1174
DdeI CTNAG 7 cut(s) 192, 458, 758, 887, 1038, 1203, 1358
DinI GGCGCC 2 cut(s) 186, 318
DpnI GATC 8 cut(s) 47, 69, 97, 747, 1020, 1131, 1169, 1327
DpnII GATC 8 cut(s) 45, 67, 95, 745, 1018, 1129, 1167, 1325
DraIII CACNNNGTG 1 cut(s) 485
EaeI YGGCCR 4 cut(s) 6, 206, 378, 738
EagI CGGCCG 2 cut(s) 6, 206
Eam1104I CTCTTC 3 cut(s) 557, 684, 1344
EarI CTCTTC 3 cut(s) 557, 684, 1344
EciI GGCGGA 1 cut(s) 1142
Ecl136II GAGCTC 1 cut(s) 851
EclXI CGGCCG 2 cut(s) 6, 206
Eco130I CCWWGG 1 cut(s) 381
Eco24I GRGCYC 1 cut(s) 853
Eco31I GGTCTC 3 cut(s) 40, 589, 616
Eco47I GGWCC 2 cut(s) 274, 678
Eco52I CGGCCG 2 cut(s) 6, 206
Eco53kI GAGCTC 1 cut(s) 851
Eco57I CTGAAG 1 cut(s) 707
EcoICRI GAGCTC 1 cut(s) 851
EcoRII CCWGG 2 cut(s) 587, 878
EcoT14I CCWWGG 1 cut(s) 381
EcoT22I ATGCAT 1 cut(s) 1214
EcoT38I GRGCYC 1 cut(s) 853
EgeI GGCGCC 2 cut(s) 186, 318
EheI GGCGCC 2 cut(s) 186, 318
ErhI CCWWGG 1 cut(s) 381
FaeI CATG 9 cut(s) 628, 651, 734, 1006, 1066, 1174, 1184, 1278, 1505
FalI AAGNNNNNCTT 4 cut(s) 924, 956, 1246, 1278
FaqI GGGAC 2 cut(s) 202, 1434
FatI CATG 9 cut(s) 624, 647, 730, 1002, 1062, 1170, 1180, 1274, 1501
FauI CCCGC 3 cut(s) 184, 1008, 1016
FbaI TGATCA 2 cut(s) 45, 745
FblI GTMKAC 2 cut(s) 1089, 1228
Fnu4HI GCNGC 6 cut(s) 6, 180, 183, 251, 618, 900
FokI GGATG 6 cut(s) 419, 763, 809, 1019, 1317, 1321
FriOI GRGCYC 1 cut(s) 853
Fsp4HI GCNGC 6 cut(s) 6, 180, 183, 251, 618, 900
FspBI CTAG 1 cut(s) 789
GlaI GCGC 2 cut(s) 186, 318
GluI GCNGC 6 cut(s) 6, 180, 183, 251, 618, 900
GsuI CTGGAG 1 cut(s) 571
HaeII RGCGCY 2 cut(s) 188, 320
HaeIII GGCC 4 cut(s) 8, 208, 380, 740
HapII CCGG 4 cut(s) 256, 277, 439, 1423
HgaI GACGC 1 cut(s) 633
HhaI GCGC 2 cut(s) 187, 319
Hin1I GRCGYC 2 cut(s) 185, 317
Hin1II CATG 9 cut(s) 628, 651, 734, 1006, 1066, 1174, 1184, 1278, 1505
Hin6I GCGC 2 cut(s) 185, 317
HinP1I GCGC 2 cut(s) 185, 317
HincII GTYRAC 1 cut(s) 1333
HindII GTYRAC 1 cut(s) 1333
HindIII AAGCTT 1 cut(s) 455
HpaII CCGG 4 cut(s) 256, 277, 439, 1423
HphI GGTGA 4 cut(s) 368, 587, 728, 1115
Hpy166II GTNNAC 6 cut(s) 298, 412, 719, 1090, 1229, 1333
Hpy188III TCNNGA 5 cut(s) 93, 731, 857, 1216, 1323
Hpy8I GTNNAC 6 cut(s) 298, 412, 719, 1090, 1229, 1333
Hpy99I CGWCG 2 cut(s) 248, 858
HpyAV CCTTC 3 cut(s) 178, 1129, 1456
HpyCH4III ACNGT 7 cut(s) 373, 503, 532, 548, 981, 1448, 1540
HpyCH4IV ACGT 1 cut(s) 782
HpyCH4V TGCA 7 cut(s) 412, 899, 1066, 1145, 1212, 1387, 1531
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 193, 960, 1043, 1052
HpyF3I CTNAG 7 cut(s) 192, 458, 758, 887, 1038, 1203, 1358
HpySE526I ACGT 1 cut(s) 782
Hsp92I GRCGYC 2 cut(s) 185, 317
Hsp92II CATG 9 cut(s) 628, 651, 734, 1006, 1066, 1174, 1184, 1278, 1505
HspAI GCGC 2 cut(s) 185, 317
KasI GGCGCC 2 cut(s) 184, 316
Ksp22I TGATCA 2 cut(s) 45, 745
KspI CCGCGG 1 cut(s) 183
Kzo9I GATC 8 cut(s) 45, 67, 95, 745, 1018, 1129, 1167, 1325
LmnI GCTCC 3 cut(s) 117, 309, 1138
Lsp1109I GCAGC 2 cut(s) 262, 911
LweI GCATC 4 cut(s) 886, 950, 1221, 1396
MaeI CTAG 1 cut(s) 789
MaeII ACGT 1 cut(s) 782
MalI GATC 8 cut(s) 47, 69, 97, 747, 1020, 1131, 1169, 1327
MbiI CCGCTC 1 cut(s) 794
MboI GATC 8 cut(s) 45, 67, 95, 745, 1018, 1129, 1167, 1325
MboII GAAGA 8 cut(s) 571, 574, 701, 821, 877, 905, 1118, 1361
MfeI CAATTG 2 cut(s) 197, 334
MflI RGATCY 2 cut(s) 95, 1325
MhlI GDGCHC 3 cut(s) 414, 853, 1245
MlsI TGGCCA 1 cut(s) 380
MluCI AATT 4 cut(s) 197, 334, 1118, 1411
MluNI TGGCCA 1 cut(s) 380
Mly113I GGCGCC 2 cut(s) 185, 317
MlyI GAGTC 6 cut(s) 184, 196, 220, 405, 728, 862
MmeI TCCRAC 2 cut(s) 165, 267
Mox20I TGGCCA 1 cut(s) 380
Mph1103I ATGCAT 1 cut(s) 1214
MroXI GAANNNNTTC 1 cut(s) 669
MscI TGGCCA 1 cut(s) 380
MseI TTAA 2 cut(s) 702, 1410
MslI CAYNNNNRTG 2 cut(s) 374, 417
Msp20I TGGCCA 1 cut(s) 380
MspA1I CMGCKG 1 cut(s) 182
MspI CCGG 4 cut(s) 256, 277, 439, 1423
MspR9I CCNGG 3 cut(s) 257, 589, 880
MunI CAATTG 2 cut(s) 197, 334
MvaI CCWGG 2 cut(s) 589, 880
MvnI CGCG 3 cut(s) 182, 1023, 1217
MwoI GCNNNNNNNGC 5 cut(s) 14, 193, 960, 1043, 1052
NarI GGCGCC 2 cut(s) 185, 317
NciI CCSGG 1 cut(s) 257
NdeII GATC 8 cut(s) 45, 67, 95, 745, 1018, 1129, 1167, 1325
NlaIII CATG 9 cut(s) 628, 651, 734, 1006, 1066, 1174, 1184, 1278, 1505
NlaIV GGNNCC 5 cut(s) 186, 318, 329, 672, 1242
NmeAIII GCCGAG 5 cut(s) 17, 34, 184, 234, 716
NruI TCGCGA 1 cut(s) 1217
NsiI ATGCAT 1 cut(s) 1214
NspI RCATGY 2 cut(s) 1066, 1505
NspV TTCGAA 1 cut(s) 431
OliI CACNNNNGTG 2 cut(s) 374, 417
PagI TCATGA 1 cut(s) 730
PciI ACATGT 1 cut(s) 1501
PcsI WCGNNNNNNNCGW 1 cut(s) 86
PdmI GAANNNNTTC 1 cut(s) 669
PfeI GAWTC 5 cut(s) 260, 280, 1162, 1194, 1369
PinAI ACCGGT 1 cut(s) 1422
PkrI GCNGC 6 cut(s) 7, 181, 184, 252, 619, 901
PleI GAGTC 6 cut(s) 184, 196, 219, 404, 728, 862
PluTI GGCGCC 2 cut(s) 188, 320
PpsI GAGTC 6 cut(s) 184, 196, 219, 404, 728, 862
PscI ACATGT 1 cut(s) 1501
Psp124BI GAGCTC 1 cut(s) 853
Psp6I CCWGG 2 cut(s) 587, 878
PspGI CCWGG 2 cut(s) 587, 878
PspN4I GGNNCC 5 cut(s) 186, 318, 329, 672, 1242
PspPI GGNCC 2 cut(s) 274, 678
PstNI CAGNNNCTG 1 cut(s) 226
PsuI RGATCY 2 cut(s) 95, 1325
RruI TCGCGA 1 cut(s) 1217
RsaI GTAC 4 cut(s) 230, 545, 978, 1175
RsaNI GTAC 4 cut(s) 229, 544, 977, 1174
RseI CAYNNNNRTG 2 cut(s) 374, 417
Rsr2I CGGWCCG 1 cut(s) 274
RsrII CGGWCCG 1 cut(s) 274
SacI GAGCTC 1 cut(s) 853
SacII CCGCGG 1 cut(s) 183
SaqAI TTAA 2 cut(s) 702, 1410
SatI GCNGC 6 cut(s) 6, 180, 183, 251, 618, 900
Sau3AI GATC 8 cut(s) 45, 67, 95, 745, 1018, 1129, 1167, 1325
Sau96I GGNCC 2 cut(s) 274, 678
SchI GAGTC 6 cut(s) 184, 196, 220, 405, 728, 862
ScrFI CCNGG 3 cut(s) 257, 589, 880
SduI GDGCHC 3 cut(s) 414, 853, 1245
SfaNI GCATC 4 cut(s) 886, 950, 1221, 1396
SfcI CTRYAG 1 cut(s) 996
SfoI GGCGCC 2 cut(s) 186, 318
Sfr303I CCGCGG 1 cut(s) 183
SfuI TTCGAA 1 cut(s) 431
SgrBI CCGCGG 1 cut(s) 183
SinI GGWCC 2 cut(s) 274, 678
SmiMI CAYNNNNRTG 2 cut(s) 374, 417
SmlI CTYRAG 1 cut(s) 964
SmoI CTYRAG 1 cut(s) 964
Sse9I AATT 4 cut(s) 197, 334, 1118, 1411
SspDI GGCGCC 2 cut(s) 184, 316
SspMI CTAG 1 cut(s) 789
SstI GAGCTC 1 cut(s) 853
StyD4I CCNGG 3 cut(s) 255, 587, 878
StyI CCWWGG 1 cut(s) 381
TaaI ACNGT 7 cut(s) 373, 503, 532, 548, 981, 1448, 1540
TaiI ACGT 1 cut(s) 785
TaqI TCGA 5 cut(s) 309, 431, 856, 1271, 1322
TasI AATT 4 cut(s) 197, 334, 1118, 1411
TatI WGTACW 2 cut(s) 543, 976
TauI GCSGC 4 cut(s) 8, 182, 185, 620
TfiI GAWTC 5 cut(s) 260, 280, 1162, 1194, 1369
Tru1I TTAA 2 cut(s) 702, 1410
Tru9I TTAA 2 cut(s) 702, 1410
TscAI CASTG 4 cut(s) 24, 748, 826, 1073
TseI GCWGC 2 cut(s) 250, 899
TspDTI ATGAA 7 cut(s) 49, 719, 813, 878, 1023, 1197, 1483
TspGWI ACGGA 1 cut(s) 663
TspRI CASTG 4 cut(s) 24, 748, 826, 1073
VneI GTGCAC 1 cut(s) 410
VpaK11BI GGWCC 2 cut(s) 274, 678
XceI RCATGY 2 cut(s) 1066, 1505
XmiI GTMKAC 2 cut(s) 1089, 1228
XmnI GAANNNNTTC 1 cut(s) 669
XspI CTAG 1 cut(s) 789
Zsp2I ATGCAT 1 cut(s) 1214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.