Prupe.6G089700_v2.0.a1

BTB POZ domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
6140116 .. 6142988
2873 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G089700.1

Sequence Viewer

Length: 1560 bp
ATGGCCGCCGAGAACGCTCTGAAATCTCGAGAGGTCTCAGCCATGATCAAACAGGGCTTCATCTCCGATCAAACGCTCTCATTCTCACCATCAAGATCCATATCCAAGCTCTACTCTCCCACTTCCTCGCCCTCCAAGACCCTCTCTTCTCCTCCCCCACCACCTCAACTCGCCGGGTCGACTCAGTCTTTAACTCGCCCGAGTCAGTCCCAAACGCTCTACGAGATGATGTCCGATGAGCAACACCGAGACTCCAAGCTCGCAGACCGAAAAGTCCACGAAAAAGTCCACAAACTCCTCCAAAACGCACCGTTCCGAAACCCCAATTGGGGAGGGCTAGTATCCGGTGACGTGAGGCTCACTGTGGTAGCCAAGGACGGGTTCAGGGTCACCATGGACGTGCACAAGAGCGTTTTGGCCGCGAAAAGCCGGTTTTTCGCCGATAAGCTCCGAAAAGATCGCGGGGTTTCTCACTGTGTCGAGATTTCGGACTGCGACGATGTTGAGGTGTATGTGGAAACTGTGGTGTTGATGTATTGTGAAGATTTGAAGAGGAGGTTGATGGGCGAGGAGGTCTCTAGGGTTTTGGGCTTGCTAAAGGTATCTGCTGCTATCATGTATGATGAGGGGATTGGCTCATGCTTGGAGTATTTGAAAGCTGTTCCATGGTCTGAGGAAGAAGAGGGGAAAGTTATATCTCAGCTCAATGAACTTCAGCTTCATGATGACTTGGCCAGTGAAGTTCTCCTCAGAGTGTCATCTGAACCATCCACTTCTGCAAGAGCCGATGAGATCTTTATGAGACTGCTGACCGGTGTTCTTCAAGCAAAAGACGATAGGGCTCGTCGGGAAATGAAGACTCTCATCTCTCGGTTGCTTAGAGAAGATGCAGCCAGTGGCAGCAATAATAGGCTTGATGTCTCTAAAGAAACCCTTTACCACCTTTGCCATCGGTGTCTGAGTTCTCTTGTCCTGTGCTTATCTGAAGCCACGGGCATGGATGACAGTAGGAGGGATCGCGGGGTTTTGATGGCGGAGATAGCAAGAGAAGCTGATAACATGCAGTGGATTGTTGATATTCTGGTAGACAAGAAAATGGGTGATGAGTTTGTGAAATTGTGGGCTGATCAGAAGGAGCTCGCAGTCCTCCATTCAAAGATCCCAACCATGTACCGACATGAAATCAGTAGAATCACTGCTCAGCTATGCATTGCAATTGGGAGCAGACAATTGCTTGTGCCCAAAGAAACAAGATTTTCTTTGCTATCTACATGGCTAGAAGCTCTTTATGAAGACTTTGGATGGATGAGGAGGGCTTCTTTTAGATCTGTTGATAAGAAACTGGTTGAAGAGGGGATAAGCCAAACCATTCTTACACTGCCCTTGCAGCAGCAACAGGGTATCTTGCTCAGTTGGTTTGATAGATTTCTAAACAAGGGCGACGACTGTCCAAACATTCAGAAGGCATTTGAGGTCTGGTGGAGACGAGCTTTTATCAAACATGTGTCGGAGCAGGAAAATACCCAATTGCAAATAACTGTGTGTGATTATCCAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

520

Amino Acids

58.89

Weight (kDa)

6.31

Isoelectric Point (pI)

53.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012131)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 272
AccI GTMKAC 2 cut(s) 179, 1086
AccII CGCG 3 cut(s) 422, 462, 1020
AciI CCGC 5 cut(s) 6, 420, 462, 1020, 1034
AclWI GGATC 3 cut(s) 90, 1023, 1153
AcoI YGGCCR 3 cut(s) 3, 417, 732
AcuI CTGAAG 2 cut(s) 698, 1005
AfaI GTAC 1 cut(s) 1172
AfiI CCNNNNNNNGG 3 cut(s) 328, 329, 378
AflIII ACRYGT 1 cut(s) 1501
AgeI ACCGGT 1 cut(s) 812
AgsI TTSAA 5 cut(s) 550, 655, 824, 1155, 1349
AjiI CACGTC 2 cut(s) 352, 400
AjuI GAANNNNNNNTTGG 4 cut(s) 310, 342, 365, 397
Alw21I GWGCWC 2 cut(s) 405, 1140
Alw26I GTCTC 6 cut(s) 40, 243, 580, 796, 925, 1477
Alw44I GTGCAC 1 cut(s) 401
AlwI GGATC 3 cut(s) 90, 1023, 1153
Ama87I CYCGRG 2 cut(s) 27, 199
AoxI GGCC 3 cut(s) 3, 417, 732
ApaLI GTGCAC 1 cut(s) 401
ApeKI GCWGC 5 cut(s) 608, 890, 900, 1387, 1390
AsiGI ACCGGT 1 cut(s) 812
AsuC2I CCSGG 1 cut(s) 175
AsuHPI GGTGA 4 cut(s) 78, 359, 382, 1112
AvaI CYCGRG 2 cut(s) 27, 199
BaeGI GKGCMC 2 cut(s) 405, 1242
BalI TGGCCA 1 cut(s) 734
BanII GRGCYC 2 cut(s) 844, 1140
BbsI GAAGAC 2 cut(s) 863, 1299
Bbv12I GWGCWC 2 cut(s) 405, 1140
BbvI GCAGC 5 cut(s) 595, 902, 912, 1399, 1402
BccI CCATC 6 cut(s) 97, 556, 775, 957, 1024, 1296
BciVI GTATCC 1 cut(s) 352
BclI TGATCA 2 cut(s) 45, 1126
BcnI CCSGG 1 cut(s) 175
BcoDI GTCTC 6 cut(s) 40, 243, 580, 796, 925, 1477
BfaI CTAG 3 cut(s) 338, 579, 1277
BfuI GTATCC 1 cut(s) 352
BglII AGATCT 2 cut(s) 792, 1325
BisI GCNGC 7 cut(s) 6, 420, 609, 891, 901, 1388, 1391
BlpI GCTNAGC 1 cut(s) 1200
BlsI GCNGC 7 cut(s) 7, 421, 610, 892, 902, 1389, 1392
Bme1390I CCNGG 1 cut(s) 175
BmeT110I CYCGRG 2 cut(s) 27, 199
BmgBI CACGTC 2 cut(s) 352, 400
BmrFI CCNGG 1 cut(s) 175
BmsI GCATC 1 cut(s) 877
BoxI GACNNNNGTC 1 cut(s) 1446
BpiI GAAGAC 2 cut(s) 863, 1299
BplI GAGNNNNNCTC 2 cut(s) 560, 592
Bpu1102I GCTNAGC 1 cut(s) 1200
BpuMI CCSGG 1 cut(s) 175
BsaBI GATNNNNATC 1 cut(s) 100
BsaI GGTCTC 2 cut(s) 40, 580
BsaJI CCNNGG 4 cut(s) 372, 393, 665, 990
BsaWI WCCGGW 2 cut(s) 344, 812
BsaXI ACNNNNNCTCC 4 cut(s) 236, 266, 324, 354
Bsc4I CCNNNNNNNGG 3 cut(s) 328, 329, 378
Bse118I RCCGGY 2 cut(s) 429, 812
Bse1I ACTGG 3 cut(s) 735, 894, 1347
Bse3DI GCAATG 1 cut(s) 1209
Bse8I GATNNNNATC 1 cut(s) 100
BseDI CCNNGG 4 cut(s) 372, 393, 665, 990
BseGI GGATG 4 cut(s) 767, 1006, 1307, 1311
BseJI GATNNNNATC 1 cut(s) 100
BseLI CCNNNNNNNGG 3 cut(s) 328, 329, 378
BseMI GCAATG 1 cut(s) 1209
BseMII CTCAG 8 cut(s) 51, 197, 663, 713, 763, 950, 1214, 1423
BseNI ACTGG 3 cut(s) 735, 894, 1347
BseRI GAGGAG 6 cut(s) 141, 287, 568, 584, 737, 1324
BseSI GKGCMC 2 cut(s) 405, 1242
BseXI GCAGC 5 cut(s) 595, 902, 912, 1399, 1402
Bsh1236I CGCG 3 cut(s) 422, 462, 1020
BshFI GGCC 3 cut(s) 5, 419, 734
BshTI ACCGGT 1 cut(s) 812
BsiHKAI GWGCWC 2 cut(s) 405, 1140
BsiHKCI CYCGRG 2 cut(s) 27, 199
BsiSI CCGG 4 cut(s) 174, 345, 430, 813
BslFI GGGAC 1 cut(s) 193
BslI CCNNNNNNNGG 3 cut(s) 328, 329, 378
BsmAI GTCTC 6 cut(s) 40, 243, 580, 796, 925, 1477
BsmBI CGTCTC 1 cut(s) 1477
BsmFI GGGAC 1 cut(s) 193
BsnI GGCC 3 cut(s) 5, 419, 734
Bso31I GGTCTC 2 cut(s) 40, 580
BsoBI CYCGRG 2 cut(s) 27, 199
Bsp1286I GDGCHC 4 cut(s) 405, 844, 1140, 1242
Bsp143I GATC 9 cut(s) 45, 67, 95, 457, 792, 1015, 1126, 1158, 1325
Bsp1720I GCTNAGC 1 cut(s) 1200
Bsp19I CCATGG 2 cut(s) 393, 665
BspACI CCGC 5 cut(s) 6, 420, 462, 1020, 1034
BspANI GGCC 3 cut(s) 5, 419, 734
BspCNI CTCAG 8 cut(s) 50, 196, 664, 712, 762, 951, 1213, 1422
BspFNI CGCG 3 cut(s) 422, 462, 1020
BspHI TCATGA 1 cut(s) 721
BspPI GGATC 3 cut(s) 90, 1023, 1153
BspTNI GGTCTC 2 cut(s) 40, 580
BsrDI GCAATG 1 cut(s) 1209
BsrFI RCCGGY 2 cut(s) 429, 812
BsrI ACTGG 3 cut(s) 735, 894, 1347
BssAI RCCGGY 2 cut(s) 429, 812
BssECI CCNNGG 4 cut(s) 372, 393, 665, 990
BssMI GATC 9 cut(s) 45, 67, 95, 457, 792, 1015, 1126, 1158, 1325
BssT1I CCWWGG 3 cut(s) 372, 393, 665
Bst4CI ACNGT 7 cut(s) 312, 364, 476, 523, 1007, 1448, 1540
Bst6I CTCTTC 4 cut(s) 151, 545, 675, 1344
BstC8I GCNNGC 3 cut(s) 261, 593, 1140
BstDEI CTNAG 9 cut(s) 37, 183, 672, 699, 749, 878, 959, 1200, 1409
BstDSI CCRYGG 3 cut(s) 393, 665, 990
BstEII GGTNACC 1 cut(s) 388
BstF5I GGATG 4 cut(s) 767, 1006, 1307, 1311
BstFNI CGCG 3 cut(s) 422, 462, 1020
BstKTI GATC 9 cut(s) 48, 70, 98, 460, 795, 1018, 1129, 1161, 1328
BstMAI GTCTC 6 cut(s) 40, 243, 580, 796, 925, 1477
BstMBI GATC 9 cut(s) 45, 67, 95, 457, 792, 1015, 1126, 1158, 1325
BstMWI GCNNNNNNNGC 4 cut(s) 14, 1040, 1049, 1387
BstNSI RCATGY 2 cut(s) 1063, 1505
BstPAI GACNNNNGTC 1 cut(s) 1446
BstPI GGTNACC 1 cut(s) 388
BstSCI CCNGG 1 cut(s) 173
BstSLI GKGCMC 2 cut(s) 405, 1242
BstUI CGCG 3 cut(s) 422, 462, 1020
BstV1I GCAGC 5 cut(s) 595, 902, 912, 1399, 1402
BstV2I GAAGAC 2 cut(s) 863, 1299
BstX2I RGATCY 4 cut(s) 95, 792, 1158, 1325
BstXI CCANNNNNNTGG 1 cut(s) 997
BstYI RGATCY 4 cut(s) 95, 792, 1158, 1325
BsuI GTATCC 1 cut(s) 352
BsuRI GGCC 3 cut(s) 5, 419, 734
BtgI CCRYGG 3 cut(s) 393, 665, 990
BtrI CACGTC 2 cut(s) 352, 400
BtsCI GGATG 4 cut(s) 767, 1006, 1307, 1311
BtsI GCAGTG 3 cut(s) 1070, 1194, 1376
BtsIMutI CAGTG 7 cut(s) 360, 472, 742, 901, 1070, 1194, 1376
Cac8I GCNNGC 3 cut(s) 261, 593, 1140
CciI TCATGA 1 cut(s) 721
Cfr10I RCCGGY 2 cut(s) 429, 812
Csp6I GTAC 1 cut(s) 1171
CspAI ACCGGT 1 cut(s) 812
CviQI GTAC 1 cut(s) 1171
DdeI CTNAG 9 cut(s) 37, 183, 672, 699, 749, 878, 959, 1200, 1409
DpnI GATC 9 cut(s) 47, 69, 97, 459, 794, 1017, 1128, 1160, 1327
DpnII GATC 9 cut(s) 45, 67, 95, 457, 792, 1015, 1126, 1158, 1325
DrdI GACNNNNNNGTC 1 cut(s) 272
DseDI GACNNNNNNGTC 1 cut(s) 272
EaeI YGGCCR 3 cut(s) 3, 417, 732
Eam1104I CTCTTC 4 cut(s) 151, 545, 675, 1344
EarI CTCTTC 4 cut(s) 151, 545, 675, 1344
EciI GGCGGA 1 cut(s) 1049
Ecl136II GAGCTC 1 cut(s) 1138
Eco130I CCWWGG 3 cut(s) 372, 393, 665
Eco24I GRGCYC 2 cut(s) 844, 1140
Eco31I GGTCTC 2 cut(s) 40, 580
Eco53kI GAGCTC 1 cut(s) 1138
Eco57I CTGAAG 2 cut(s) 698, 1005
Eco88I CYCGRG 2 cut(s) 27, 199
Eco91I GGTNACC 1 cut(s) 388
EcoICRI GAGCTC 1 cut(s) 1138
EcoO65I GGTNACC 1 cut(s) 388
EcoT14I CCWWGG 3 cut(s) 372, 393, 665
EcoT22I ATGCAT 1 cut(s) 1211
EcoT38I GRGCYC 2 cut(s) 844, 1140
ErhI CCWWGG 3 cut(s) 372, 393, 665
Esp3I CGTCTC 1 cut(s) 1477
FalI AAGNNNNNCTT 4 cut(s) 918, 950, 1243, 1275
FaqI GGGAC 1 cut(s) 193
FauI CCCGC 2 cut(s) 455, 1013
FbaI TGATCA 2 cut(s) 45, 1126
FblI GTMKAC 2 cut(s) 179, 1086
Fnu4HI GCNGC 7 cut(s) 6, 420, 609, 891, 901, 1388, 1391
FokI GGATG 4 cut(s) 754, 1013, 1314, 1318
FriOI GRGCYC 2 cut(s) 844, 1140
Fsp4HI GCNGC 7 cut(s) 6, 420, 609, 891, 901, 1388, 1391
FspBI CTAG 3 cut(s) 338, 579, 1277
GluI GCNGC 7 cut(s) 6, 420, 609, 891, 901, 1388, 1391
HaeIII GGCC 3 cut(s) 5, 419, 734
HapII CCGG 4 cut(s) 174, 345, 430, 813
HincII GTYRAC 1 cut(s) 180
HindII GTYRAC 1 cut(s) 180
HinfI GANTC 5 cut(s) 181, 202, 251, 859, 1191
HpaII CCGG 4 cut(s) 174, 345, 430, 813
HphI GGTGA 4 cut(s) 78, 359, 382, 1112
Hpy166II GTNNAC 5 cut(s) 180, 277, 289, 403, 1087
Hpy188III TCNNGA 6 cut(s) 27, 29, 93, 481, 722, 848
Hpy8I GTNNAC 5 cut(s) 180, 277, 289, 403, 1087
Hpy99I CGWCG 3 cut(s) 500, 849, 1445
HpyAV CCTTC 2 cut(s) 1126, 1456
HpyCH4III ACNGT 7 cut(s) 312, 364, 476, 523, 1007, 1448, 1540
HpyCH4IV ACGT 2 cut(s) 351, 399
HpyCH4V TGCA 8 cut(s) 403, 779, 890, 1063, 1209, 1214, 1387, 1531
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 1040, 1049, 1387
HpyF3I CTNAG 9 cut(s) 37, 183, 672, 699, 749, 878, 959, 1200, 1409
HpySE526I ACGT 2 cut(s) 351, 399
Ksp22I TGATCA 2 cut(s) 45, 1126
Kzo9I GATC 9 cut(s) 45, 67, 95, 457, 792, 1015, 1126, 1158, 1325
LmnI GCTCC 4 cut(s) 453, 1135, 1221, 1510
Lsp1109I GCAGC 5 cut(s) 595, 902, 912, 1399, 1402
LweI GCATC 1 cut(s) 877
MaeI CTAG 3 cut(s) 338, 579, 1277
MaeII ACGT 2 cut(s) 351, 399
MaeIII GTNAC 2 cut(s) 347, 388
MalI GATC 9 cut(s) 47, 69, 97, 459, 794, 1017, 1128, 1160, 1327
MboI GATC 9 cut(s) 45, 67, 95, 457, 792, 1015, 1126, 1158, 1325
MfeI CAATTG 4 cut(s) 325, 1215, 1229, 1526
MflI RGATCY 4 cut(s) 95, 792, 1158, 1325
MhlI GDGCHC 4 cut(s) 405, 844, 1140, 1242
MlsI TGGCCA 1 cut(s) 734
MluCI AATT 5 cut(s) 325, 1115, 1215, 1229, 1526
MluNI TGGCCA 1 cut(s) 734
MlyI GAGTC 4 cut(s) 175, 211, 245, 853
MmeI TCCRAC 1 cut(s) 1488
Mox20I TGGCCA 1 cut(s) 734
Mph1103I ATGCAT 1 cut(s) 1211
MscI TGGCCA 1 cut(s) 734
MseI TTAA 1 cut(s) 191
MslI CAYNNNNRTG 2 cut(s) 398, 995
Msp20I TGGCCA 1 cut(s) 734
MspI CCGG 4 cut(s) 174, 345, 430, 813
MspR9I CCNGG 1 cut(s) 175
MunI CAATTG 4 cut(s) 325, 1215, 1229, 1526
MvnI CGCG 3 cut(s) 422, 462, 1020
MwoI GCNNNNNNNGC 4 cut(s) 14, 1040, 1049, 1387
NciI CCSGG 1 cut(s) 175
NcoI CCATGG 2 cut(s) 393, 665
NdeII GATC 9 cut(s) 45, 67, 95, 457, 792, 1015, 1126, 1158, 1325
NmeAIII GCCGAG 1 cut(s) 34
NmuCI GTSAC 2 cut(s) 347, 388
NsiI ATGCAT 1 cut(s) 1211
NspI RCATGY 2 cut(s) 1063, 1505
PaeR7I CTCGAG 1 cut(s) 27
PagI TCATGA 1 cut(s) 721
PciI ACATGT 1 cut(s) 1501
PfeI GAWTC 1 cut(s) 1191
PflFI GACNNNGTC 1 cut(s) 184
PinAI ACCGGT 1 cut(s) 812
PkrI GCNGC 7 cut(s) 7, 421, 610, 892, 902, 1389, 1392
PleI GAGTC 4 cut(s) 175, 210, 245, 853
PpsI GAGTC 4 cut(s) 175, 210, 245, 853
PscI ACATGT 1 cut(s) 1501
PshAI GACNNNNGTC 1 cut(s) 1446
Psp124BI GAGCTC 1 cut(s) 1140
PspEI GGTNACC 1 cut(s) 388
PsuI RGATCY 4 cut(s) 95, 792, 1158, 1325
PsyI GACNNNGTC 1 cut(s) 184
RsaI GTAC 1 cut(s) 1172
RsaNI GTAC 1 cut(s) 1171
RseI CAYNNNNRTG 2 cut(s) 398, 995
SacI GAGCTC 1 cut(s) 1140
SalI GTCGAC 1 cut(s) 178
SaqAI TTAA 1 cut(s) 191
SatI GCNGC 7 cut(s) 6, 420, 609, 891, 901, 1388, 1391
Sau3AI GATC 9 cut(s) 45, 67, 95, 457, 792, 1015, 1126, 1158, 1325
SchI GAGTC 4 cut(s) 175, 211, 245, 853
ScrFI CCNGG 1 cut(s) 175
SduI GDGCHC 4 cut(s) 405, 844, 1140, 1242
SfaNI GCATC 1 cut(s) 877
Sfr274I CTCGAG 1 cut(s) 27
SlaI CTCGAG 1 cut(s) 27
SmiMI CAYNNNNRTG 2 cut(s) 398, 995
SmlI CTYRAG 1 cut(s) 27
SmoI CTYRAG 1 cut(s) 27
Sse9I AATT 5 cut(s) 325, 1115, 1215, 1229, 1526
SsiI CCGC 5 cut(s) 6, 420, 462, 1020, 1034
SspMI CTAG 3 cut(s) 338, 579, 1277
SstI GAGCTC 1 cut(s) 1140
StyD4I CCNGG 1 cut(s) 173
StyI CCWWGG 3 cut(s) 372, 393, 665
TaaI ACNGT 7 cut(s) 312, 364, 476, 523, 1007, 1448, 1540
TaiI ACGT 2 cut(s) 354, 402
TaqI TCGA 3 cut(s) 28, 179, 480
TaqII GACCGA 1 cut(s) 282
TasI AATT 5 cut(s) 325, 1115, 1215, 1229, 1526
TauI GCSGC 2 cut(s) 8, 422
TfiI GAWTC 1 cut(s) 1191
Tru1I TTAA 1 cut(s) 191
Tru9I TTAA 1 cut(s) 191
TscAI CASTG 7 cut(s) 367, 479, 742, 901, 1070, 1201, 1383
TseFI GTSAC 2 cut(s) 347, 388
TseI GCWGC 5 cut(s) 608, 890, 900, 1387, 1390
Tsp45I GTSAC 2 cut(s) 347, 388
TspDTI ATGAA 6 cut(s) 49, 710, 723, 869, 1194, 1305
TspRI CASTG 7 cut(s) 367, 479, 742, 901, 1070, 1201, 1383
Tth111I GACNNNGTC 1 cut(s) 184
VneI GTGCAC 1 cut(s) 401
XceI RCATGY 2 cut(s) 1063, 1505
XhoI CTCGAG 1 cut(s) 27
XmiI GTMKAC 2 cut(s) 179, 1086
XspI CTAG 3 cut(s) 338, 579, 1277
Zsp2I ATGCAT 1 cut(s) 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.