Rh5BG418200

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0012131
Physical Location & Seq
Forward (+)
67772574 .. 67775812
3239 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG418200.1

Sequence Viewer

Length: 1554 bp
ATGGCGGCCGAGAACGCACTGAAATCCAAGGAGGTCTCGGCGATGATCAAACAGGGCTTCATTTCCGATCAAACCCTCTCGTTCTCGCCGTCAAGATCCACCAACCCCAAGCTCCACTCCCCCAATTCCTCCCCCAACTCCAAAACCCTATCCTCTCCTCCCTTCTCCCCCGCGGCGGCGCCGACTCAGCAATTGACTCGGCCGAGTCAGTCCCAGACCCTGTACGAGATGATGTCCGACGAGCAGCACCGGGATTCCAAGCACTCGGACCGGAATCTCCACCAGAAAGTCCACAAGCTCCTCGAAACGGCGCCGTTTCGGAACCCCAATTGGGGAGGGCTGGTTTCTGGTGATGTGAGGCTCACAGTGGTGGCCAAGGACGGGTTTAGAGTCTCAATGGATGTGCACAAGAGTGTTCTGGCTTCGAAAAGCCGGTTTTTCGCCGAAAAGCTTAGGAAAGATAGAGGGGTTTCACATTGTGTGGAGATTTCTGACTGTGATGATGTGGAGGTGTATGTGGAAACTGTGGTGTTGATGTACTGTGAGGATTTGAAGAAGAGGTTGATGGGTGAGGAGGTCTCCAGGGTTTTGGGTTTGCTAAAGGTCTCTGCGGCTCTCATGTTTGATGAGGGCATTGCCTCATGCTTGGAGTATTTGGAAGCGGTTCCGTGGTCCGAGGAGGAAGAGGAGAAAGTTAAATCTCAACTCGGTGAACTTCAGCTTCATGACTCGGCCAGTGATCAAGTTTTGCTCAGAGTATCCTCTGAACCATCCACGTCTGCTAGAGCGGATGAAATCTTATTGAGACTGCTCACTGGTGTTCTTCAAGCAAAAGATGATAGAGCTCGTCGAGAAATGAAGACTCTCATTTCCAGGTTGCTTAGAGAAGATGCAGCGAATGACGGCAATAGGCTTGATGTGTCTAAAGAAACCCTTTACAATCTTTGCCATAGATGCTTGAGTTCCCTTGTACTGTGCTTATCCGAAGCTACAGGAATGGATGAAAAGCGGGATCGCGGGGTATTGATGGCTGAGATAGCAAGAGAGGCTGATAACATGCAGTGGATTGTTGATATTATGGTAGACAAGAAAATGGGTGAAGATTTTGTGAAATTATGGGCGGATCAGAAGGAGCTTGCAGTCCTCCACTCAAAGATTCCGATCATGTACCGACATGAAATCAGCAGAATCACAGCTCAGCTATGCATCGCGATTGGGAGTAGACATTTGCTGGTGCCCAAAGACACAAGATTTTCTTTGCTTTCGACATGGCTGGAAGCTCTTTATGAGGACTTCGGATGGATGAGGAGGGCTTCGAGATCTGTTGACAAGAAACTTGTTGAAGAGGGTCTAAGCCAAACGATTCTTACACTTCCTTTGCATCAACAACAGGCTATAATGCTTAATTGGTTTGACCGGTTTCTAAACAAGGGAGATGACTGTCCCAACATTCAGAAGGCGTTTGAAGTTTGGTGGAGGAGAGCTTTCATCAAACATGTGGCAGAGCAGGAAAATCATAGGTTGCAAATAACTGTTTGTGATTATCCCAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

517

Amino Acids

58.79

Weight (kDa)

6.24

Isoelectric Point (pI)

49.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 264 - 498 4.2e-71 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60050
fragaria_vesca FvH4_3g34280
malus_domestica MD03G1106900.v1.1 MD11G1119600.v1.1
prunus_persica Prupe.6G089700_v2.0.a1
pyrus_communis pycom03g08630 pycom11g10090
rosa_chinensis RchiOBHm_Chr5g0061841 RchiOBHm_Chr5g0061851
rosa_laevigata RLG00000035510
rosa_multiflora Rmu_sc0004134.1_g000002 Rmu_sc0011641.1_g000016
rosa_roxburghii Rroxscaffold_1G00018890
rosa_rugosa Rorug05G0344800
rosa_samantha Rh5AG405400 Rh5BG418200 Rh5CG442700 Rh5DG432300
rosa_wichuraiana Rw5G038060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 178, 310, 1234
AccBSI CCGCTC 1 cut(s) 788
AccI GTMKAC 2 cut(s) 1083, 1222
AccII CGCG 3 cut(s) 173, 1017, 1211
AclWI GGATC 3 cut(s) 90, 1020, 1131
AcoI YGGCCR 4 cut(s) 6, 200, 372, 732
AcuI CTGAAG 1 cut(s) 701
AcyI GRCGYC 2 cut(s) 179, 311
AdeI CACNNNGTG 1 cut(s) 479
AfaI GTAC 4 cut(s) 224, 539, 972, 1169
AfiI CCNNNNNNNGG 5 cut(s) 175, 307, 331, 332, 381
AflIII ACRYGT 1 cut(s) 1495
AgeI ACCGGT 1 cut(s) 1416
AgsI TTSAA 4 cut(s) 553, 827, 1343, 1466
AjiI CACGTC 1 cut(s) 777
AjnI CCWGG 2 cut(s) 581, 872
AleI CACNNNNGTG 2 cut(s) 368, 411
Alw21I GWGCWC 2 cut(s) 408, 847
Alw26I GTCTC 5 cut(s) 40, 397, 583, 610, 799
Alw44I GTGCAC 1 cut(s) 404
AlwI GGATC 3 cut(s) 90, 1020, 1131
AlwNI CAGNNNCTG 1 cut(s) 220
AoxI GGCC 4 cut(s) 6, 200, 372, 732
ApaLI GTGCAC 1 cut(s) 404
ApeKI GCWGC 2 cut(s) 244, 893
AsiGI ACCGGT 1 cut(s) 1416
Asp700I GAANNNNTTC 1 cut(s) 663
AspLEI GCGC 2 cut(s) 181, 313
AspS9I GGNCC 2 cut(s) 268, 672
AsuC2I CCSGG 1 cut(s) 251
AsuHPI GGTGA 4 cut(s) 362, 581, 722, 1109
AsuII TTCGAA 1 cut(s) 425
AvaII GGWCC 2 cut(s) 268, 672
BaeGI GKGCMC 2 cut(s) 408, 1239
BalI TGGCCA 1 cut(s) 374
BanI GGYRCC 3 cut(s) 178, 310, 1234
BanII GRGCYC 1 cut(s) 847
BbsI GAAGAC 1 cut(s) 866
Bbv12I GWGCWC 2 cut(s) 408, 847
BbvI GCAGC 2 cut(s) 256, 905
BccI CCATC 4 cut(s) 559, 778, 1021, 1293
BceAI ACGGC 4 cut(s) 73, 298, 324, 919
BcgI CGANNNNNNTGC 2 cut(s) 179, 213
BciT130I CCWGG 2 cut(s) 583, 874
BciVI GTATCC 1 cut(s) 769
BclI TGATCA 2 cut(s) 45, 739
BcnI CCSGG 1 cut(s) 251
BcoDI GTCTC 5 cut(s) 40, 397, 583, 610, 799
BfaI CTAG 1 cut(s) 783
BfmI CTRYAG 1 cut(s) 990
BfoI RGCGCY 2 cut(s) 182, 314
BfuI GTATCC 1 cut(s) 769
BglII AGATCT 1 cut(s) 1319
BisI GCNGC 6 cut(s) 6, 174, 177, 245, 612, 894
BlpI GCTNAGC 1 cut(s) 1197
BlsI GCNGC 6 cut(s) 7, 175, 178, 246, 613, 895
Bme1390I CCNGG 3 cut(s) 251, 583, 874
Bme18I GGWCC 2 cut(s) 268, 672
BmgBI CACGTC 1 cut(s) 777
BmgT120I GGNCC 2 cut(s) 268, 672
BmiI GGNNCC 5 cut(s) 180, 312, 323, 666, 1236
BmrFI CCNGG 3 cut(s) 251, 583, 874
BmrI ACTGGG 1 cut(s) 1542
BmsI GCATC 4 cut(s) 880, 944, 1215, 1390
BmuI ACTGGG 1 cut(s) 1542
BpiI GAAGAC 1 cut(s) 866
BplI GAGNNNNNCTC 2 cut(s) 563, 595
BpmI CTGGAG 1 cut(s) 565
Bpu10I CCTNAGC 1 cut(s) 452
Bpu1102I GCTNAGC 1 cut(s) 1197
Bpu14I TTCGAA 1 cut(s) 425
BpuEI CTTGAG 1 cut(s) 979
BpuMI CCSGG 1 cut(s) 251
BsaBI GATNNNNATC 1 cut(s) 1160
BsaHI GRCGYC 2 cut(s) 179, 311
BsaI GGTCTC 3 cut(s) 40, 583, 610
BsaJI CCNNGG 6 cut(s) 27, 171, 375, 582, 668, 675
BsaWI WCCGGW 2 cut(s) 270, 1416
BsaXI ACNNNNNCTCC 2 cut(s) 327, 357
Bsc4I CCNNNNNNNGG 5 cut(s) 175, 307, 331, 332, 381
Bse118I RCCGGY 2 cut(s) 432, 1416
Bse1I ACTGG 3 cut(s) 735, 820, 1548
Bse3DI GCAATG 1 cut(s) 633
Bse8I GATNNNNATC 1 cut(s) 1160
BseBI CCWGG 2 cut(s) 583, 874
BseDI CCNNGG 6 cut(s) 27, 171, 375, 582, 668, 675
BseGI GGATG 6 cut(s) 406, 770, 796, 1006, 1304, 1308
BseJI GATNNNNATC 1 cut(s) 1160
BseLI CCNNNNNNNGG 5 cut(s) 175, 307, 331, 332, 381
BseMI GCAATG 1 cut(s) 633
BseMII CTCAG 4 cut(s) 200, 766, 1023, 1211
BseNI ACTGG 3 cut(s) 735, 820, 1548
BseRI GAGGAG 7 cut(s) 147, 290, 587, 692, 701, 1321, 1492
BseSI GKGCMC 2 cut(s) 408, 1239
BseX3I CGGCCG 2 cut(s) 6, 200
BseXI GCAGC 2 cut(s) 256, 905
Bsh1236I CGCG 3 cut(s) 173, 1017, 1211
Bsh1285I CGRYCG 2 cut(s) 9, 203
BshFI GGCC 4 cut(s) 8, 202, 374, 734
BshNI GGYRCC 3 cut(s) 178, 310, 1234
BshTI ACCGGT 1 cut(s) 1416
BsiEI CGRYCG 2 cut(s) 9, 203
BsiHKAI GWGCWC 2 cut(s) 408, 847
BsiSI CCGG 4 cut(s) 250, 271, 433, 1417
BslFI GGGAC 2 cut(s) 196, 1428
BslI CCNNNNNNNGG 5 cut(s) 175, 307, 331, 332, 381
BsmAI GTCTC 5 cut(s) 40, 397, 583, 610, 799
BsmFI GGGAC 2 cut(s) 196, 1428
BsnI GGCC 4 cut(s) 8, 202, 374, 734
Bso31I GGTCTC 3 cut(s) 40, 583, 610
Bsp119I TTCGAA 1 cut(s) 425
Bsp1286I GDGCHC 3 cut(s) 408, 847, 1239
Bsp143I GATC 8 cut(s) 45, 67, 95, 739, 1012, 1123, 1161, 1319
Bsp1720I GCTNAGC 1 cut(s) 1197
Bsp68I TCGCGA 1 cut(s) 1211
BspANI GGCC 4 cut(s) 8, 202, 374, 734
BspCNI CTCAG 4 cut(s) 199, 765, 1024, 1210
BspFNI CGCG 3 cut(s) 173, 1017, 1211
BspHI TCATGA 1 cut(s) 724
BspLI GGNNCC 5 cut(s) 180, 312, 323, 666, 1236
BspPI GGATC 3 cut(s) 90, 1020, 1131
BspT104I TTCGAA 1 cut(s) 425
BspT107I GGYRCC 3 cut(s) 178, 310, 1234
BspTNI GGTCTC 3 cut(s) 40, 583, 610
BsrBI CCGCTC 1 cut(s) 788
BsrDI GCAATG 1 cut(s) 633
BsrFI RCCGGY 2 cut(s) 432, 1416
BsrI ACTGG 3 cut(s) 735, 820, 1548
BssAI RCCGGY 2 cut(s) 432, 1416
BssECI CCNNGG 6 cut(s) 27, 171, 375, 582, 668, 675
BssMI GATC 8 cut(s) 45, 67, 95, 739, 1012, 1123, 1161, 1319
BssNI GRCGYC 2 cut(s) 179, 311
BssT1I CCWWGG 2 cut(s) 27, 375
Bst2UI CCWGG 2 cut(s) 583, 874
Bst4CI ACNGT 7 cut(s) 367, 497, 526, 542, 975, 1442, 1534
Bst6I CTCTTC 3 cut(s) 551, 678, 1338
BstACI GRCGYC 2 cut(s) 179, 311
BstBI TTCGAA 1 cut(s) 425
BstC8I GCNNGC 1 cut(s) 1137
BstDEI CTNAG 7 cut(s) 186, 452, 752, 881, 1032, 1197, 1352
BstDSI CCRYGG 2 cut(s) 171, 668
BstF5I GGATG 6 cut(s) 406, 770, 796, 1006, 1304, 1308
BstFNI CGCG 3 cut(s) 173, 1017, 1211
BstH2I RGCGCY 2 cut(s) 182, 314
BstHHI GCGC 2 cut(s) 181, 313
BstKTI GATC 8 cut(s) 48, 70, 98, 742, 1015, 1126, 1164, 1322
BstMAI GTCTC 5 cut(s) 40, 397, 583, 610, 799
BstMBI GATC 8 cut(s) 45, 67, 95, 739, 1012, 1123, 1161, 1319
BstMCI CGRYCG 2 cut(s) 9, 203
BstMWI GCNNNNNNNGC 5 cut(s) 14, 187, 954, 1037, 1046
BstNI CCWGG 2 cut(s) 583, 874
BstNSI RCATGY 2 cut(s) 1060, 1499
BstSCI CCNGG 3 cut(s) 249, 581, 872
BstSFI CTRYAG 1 cut(s) 990
BstSLI GKGCMC 2 cut(s) 408, 1239
BstUI CGCG 3 cut(s) 173, 1017, 1211
BstV1I GCAGC 2 cut(s) 256, 905
BstV2I GAAGAC 1 cut(s) 866
BstX2I RGATCY 2 cut(s) 95, 1319
BstXI CCANNNNNNTGG 1 cut(s) 589
BstYI RGATCY 2 cut(s) 95, 1319
BstZI CGGCCG 2 cut(s) 6, 200
BsuI GTATCC 1 cut(s) 769
BsuRI GGCC 4 cut(s) 8, 202, 374, 734
BtgI CCRYGG 2 cut(s) 171, 668
BtgZI GCGATG 2 cut(s) 56, 1192
BtrI CACGTC 1 cut(s) 777
BtsCI GGATG 6 cut(s) 406, 770, 796, 1006, 1304, 1308
BtsI GCAGTG 1 cut(s) 1067
BtsIMutI CAGTG 5 cut(s) 17, 372, 742, 813, 1067
BtuMI TCGCGA 1 cut(s) 1211
Cac8I GCNNGC 1 cut(s) 1137
CaiI CAGNNNCTG 1 cut(s) 220
CciI TCATGA 1 cut(s) 724
CfoI GCGC 2 cut(s) 181, 313
Cfr10I RCCGGY 2 cut(s) 432, 1416
Cfr13I GGNCC 2 cut(s) 268, 672
Cfr42I CCGCGG 1 cut(s) 174
CpoI CGGWCCG 1 cut(s) 268
Csp6I GTAC 4 cut(s) 223, 538, 971, 1168
CspAI ACCGGT 1 cut(s) 1416
CspI CGGWCCG 1 cut(s) 268
CviAII CATG 8 cut(s) 619, 642, 725, 1057, 1165, 1175, 1269, 1496
CviQI GTAC 4 cut(s) 223, 538, 971, 1168
DdeI CTNAG 7 cut(s) 186, 452, 752, 881, 1032, 1197, 1352
DinI GGCGCC 2 cut(s) 180, 312
DpnI GATC 8 cut(s) 47, 69, 97, 741, 1014, 1125, 1163, 1321
DpnII GATC 8 cut(s) 45, 67, 95, 739, 1012, 1123, 1161, 1319
DraIII CACNNNGTG 1 cut(s) 479
EaeI YGGCCR 4 cut(s) 6, 200, 372, 732
EagI CGGCCG 2 cut(s) 6, 200
Eam1104I CTCTTC 3 cut(s) 551, 678, 1338
EarI CTCTTC 3 cut(s) 551, 678, 1338
EciI GGCGGA 1 cut(s) 1136
Ecl136II GAGCTC 1 cut(s) 845
EclXI CGGCCG 2 cut(s) 6, 200
Eco130I CCWWGG 2 cut(s) 27, 375
Eco24I GRGCYC 1 cut(s) 847
Eco31I GGTCTC 3 cut(s) 40, 583, 610
Eco47I GGWCC 2 cut(s) 268, 672
Eco52I CGGCCG 2 cut(s) 6, 200
Eco53kI GAGCTC 1 cut(s) 845
Eco57I CTGAAG 1 cut(s) 701
EcoICRI GAGCTC 1 cut(s) 845
EcoRII CCWGG 2 cut(s) 581, 872
EcoT14I CCWWGG 2 cut(s) 27, 375
EcoT22I ATGCAT 1 cut(s) 1208
EcoT38I GRGCYC 1 cut(s) 847
EgeI GGCGCC 2 cut(s) 180, 312
EheI GGCGCC 2 cut(s) 180, 312
ErhI CCWWGG 2 cut(s) 27, 375
FaeI CATG 8 cut(s) 622, 645, 728, 1060, 1168, 1178, 1272, 1499
FalI AAGNNNNNCTT 4 cut(s) 918, 950, 1240, 1272
FaqI GGGAC 2 cut(s) 196, 1428
FatI CATG 8 cut(s) 618, 641, 724, 1056, 1164, 1174, 1268, 1495
FauI CCCGC 3 cut(s) 178, 1002, 1010
FbaI TGATCA 2 cut(s) 45, 739
FblI GTMKAC 2 cut(s) 1083, 1222
Fnu4HI GCNGC 6 cut(s) 6, 174, 177, 245, 612, 894
FokI GGATG 6 cut(s) 413, 757, 803, 1013, 1311, 1315
FriOI GRGCYC 1 cut(s) 847
Fsp4HI GCNGC 6 cut(s) 6, 174, 177, 245, 612, 894
FspBI CTAG 1 cut(s) 783
GlaI GCGC 2 cut(s) 180, 312
GluI GCNGC 6 cut(s) 6, 174, 177, 245, 612, 894
GsuI CTGGAG 1 cut(s) 565
HaeII RGCGCY 2 cut(s) 182, 314
HaeIII GGCC 4 cut(s) 8, 202, 374, 734
HapII CCGG 4 cut(s) 250, 271, 433, 1417
HhaI GCGC 2 cut(s) 181, 313
Hin1I GRCGYC 2 cut(s) 179, 311
Hin1II CATG 8 cut(s) 622, 645, 728, 1060, 1168, 1178, 1272, 1499
Hin6I GCGC 2 cut(s) 179, 311
HinP1I GCGC 2 cut(s) 179, 311
HincII GTYRAC 1 cut(s) 1327
HindII GTYRAC 1 cut(s) 1327
HindIII AAGCTT 1 cut(s) 449
HpaII CCGG 4 cut(s) 250, 271, 433, 1417
HphI GGTGA 4 cut(s) 362, 581, 722, 1109
Hpy166II GTNNAC 6 cut(s) 292, 406, 713, 1084, 1223, 1327
Hpy188III TCNNGA 5 cut(s) 93, 725, 851, 1210, 1317
Hpy8I GTNNAC 6 cut(s) 292, 406, 713, 1084, 1223, 1327
Hpy99I CGWCG 2 cut(s) 242, 852
HpyAV CCTTC 3 cut(s) 172, 1123, 1450
HpyCH4III ACNGT 7 cut(s) 367, 497, 526, 542, 975, 1442, 1534
HpyCH4IV ACGT 1 cut(s) 776
HpyCH4V TGCA 7 cut(s) 406, 893, 1060, 1139, 1206, 1381, 1525
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 187, 954, 1037, 1046
HpyF3I CTNAG 7 cut(s) 186, 452, 752, 881, 1032, 1197, 1352
HpySE526I ACGT 1 cut(s) 776
Hsp92I GRCGYC 2 cut(s) 179, 311
Hsp92II CATG 8 cut(s) 622, 645, 728, 1060, 1168, 1178, 1272, 1499
HspAI GCGC 2 cut(s) 179, 311
KasI GGCGCC 2 cut(s) 178, 310
Ksp22I TGATCA 2 cut(s) 45, 739
KspI CCGCGG 1 cut(s) 174
Kzo9I GATC 8 cut(s) 45, 67, 95, 739, 1012, 1123, 1161, 1319
LmnI GCTCC 3 cut(s) 117, 303, 1132
Lsp1109I GCAGC 2 cut(s) 256, 905
LweI GCATC 4 cut(s) 880, 944, 1215, 1390
MaeI CTAG 1 cut(s) 783
MaeII ACGT 1 cut(s) 776
MalI GATC 8 cut(s) 47, 69, 97, 741, 1014, 1125, 1163, 1321
MbiI CCGCTC 1 cut(s) 788
MboI GATC 8 cut(s) 45, 67, 95, 739, 1012, 1123, 1161, 1319
MboII GAAGA 8 cut(s) 565, 568, 695, 815, 871, 899, 1112, 1355
MfeI CAATTG 2 cut(s) 191, 328
MflI RGATCY 2 cut(s) 95, 1319
MhlI GDGCHC 3 cut(s) 408, 847, 1239
MlsI TGGCCA 1 cut(s) 374
MluCI AATT 5 cut(s) 124, 191, 328, 1112, 1405
MluNI TGGCCA 1 cut(s) 374
Mly113I GGCGCC 2 cut(s) 179, 311
MlyI GAGTC 6 cut(s) 178, 190, 214, 399, 722, 856
MmeI TCCRAC 1 cut(s) 261
Mox20I TGGCCA 1 cut(s) 374
Mph1103I ATGCAT 1 cut(s) 1208
MroXI GAANNNNTTC 1 cut(s) 663
MscI TGGCCA 1 cut(s) 374
MseI TTAA 2 cut(s) 696, 1404
MslI CAYNNNNRTG 2 cut(s) 368, 411
Msp20I TGGCCA 1 cut(s) 374
MspA1I CMGCKG 1 cut(s) 173
MspI CCGG 4 cut(s) 250, 271, 433, 1417
MspR9I CCNGG 3 cut(s) 251, 583, 874
MunI CAATTG 2 cut(s) 191, 328
MvaI CCWGG 2 cut(s) 583, 874
MvnI CGCG 3 cut(s) 173, 1017, 1211
MwoI GCNNNNNNNGC 5 cut(s) 14, 187, 954, 1037, 1046
NarI GGCGCC 2 cut(s) 179, 311
NciI CCSGG 1 cut(s) 251
NdeII GATC 8 cut(s) 45, 67, 95, 739, 1012, 1123, 1161, 1319
NlaIII CATG 8 cut(s) 622, 645, 728, 1060, 1168, 1178, 1272, 1499
NlaIV GGNNCC 5 cut(s) 180, 312, 323, 666, 1236
NmeAIII GCCGAG 5 cut(s) 17, 34, 178, 228, 710
NruI TCGCGA 1 cut(s) 1211
NsiI ATGCAT 1 cut(s) 1208
NspI RCATGY 2 cut(s) 1060, 1499
NspV TTCGAA 1 cut(s) 425
OliI CACNNNNGTG 2 cut(s) 368, 411
PagI TCATGA 1 cut(s) 724
PciI ACATGT 1 cut(s) 1495
PcsI WCGNNNNNNNCGW 1 cut(s) 86
PdmI GAANNNNTTC 1 cut(s) 663
PfeI GAWTC 5 cut(s) 254, 274, 1156, 1188, 1363
PinAI ACCGGT 1 cut(s) 1416
PkrI GCNGC 6 cut(s) 7, 175, 178, 246, 613, 895
PleI GAGTC 6 cut(s) 178, 190, 213, 398, 722, 856
PluTI GGCGCC 2 cut(s) 182, 314
PpsI GAGTC 6 cut(s) 178, 190, 213, 398, 722, 856
PscI ACATGT 1 cut(s) 1495
Psp124BI GAGCTC 1 cut(s) 847
Psp6I CCWGG 2 cut(s) 581, 872
PspGI CCWGG 2 cut(s) 581, 872
PspN4I GGNNCC 5 cut(s) 180, 312, 323, 666, 1236
PspPI GGNCC 2 cut(s) 268, 672
PstNI CAGNNNCTG 1 cut(s) 220
PsuI RGATCY 2 cut(s) 95, 1319
RruI TCGCGA 1 cut(s) 1211
RsaI GTAC 4 cut(s) 224, 539, 972, 1169
RsaNI GTAC 4 cut(s) 223, 538, 971, 1168
RseI CAYNNNNRTG 2 cut(s) 368, 411
Rsr2I CGGWCCG 1 cut(s) 268
RsrII CGGWCCG 1 cut(s) 268
SacI GAGCTC 1 cut(s) 847
SacII CCGCGG 1 cut(s) 174
SaqAI TTAA 2 cut(s) 696, 1404
SatI GCNGC 6 cut(s) 6, 174, 177, 245, 612, 894
Sau3AI GATC 8 cut(s) 45, 67, 95, 739, 1012, 1123, 1161, 1319
Sau96I GGNCC 2 cut(s) 268, 672
SchI GAGTC 6 cut(s) 178, 190, 214, 399, 722, 856
ScrFI CCNGG 3 cut(s) 251, 583, 874
SduI GDGCHC 3 cut(s) 408, 847, 1239
SfaNI GCATC 4 cut(s) 880, 944, 1215, 1390
SfcI CTRYAG 1 cut(s) 990
SfoI GGCGCC 2 cut(s) 180, 312
Sfr303I CCGCGG 1 cut(s) 174
SfuI TTCGAA 1 cut(s) 425
SgrBI CCGCGG 1 cut(s) 174
SinI GGWCC 2 cut(s) 268, 672
SmiMI CAYNNNNRTG 2 cut(s) 368, 411
SmlI CTYRAG 1 cut(s) 958
SmoI CTYRAG 1 cut(s) 958
Sse9I AATT 5 cut(s) 124, 191, 328, 1112, 1405
SspDI GGCGCC 2 cut(s) 178, 310
SspMI CTAG 1 cut(s) 783
SstI GAGCTC 1 cut(s) 847
StyD4I CCNGG 3 cut(s) 249, 581, 872
StyI CCWWGG 2 cut(s) 27, 375
TaaI ACNGT 7 cut(s) 367, 497, 526, 542, 975, 1442, 1534
TaiI ACGT 1 cut(s) 779
TaqI TCGA 5 cut(s) 303, 425, 850, 1265, 1316
TasI AATT 5 cut(s) 124, 191, 328, 1112, 1405
TatI WGTACW 2 cut(s) 537, 970
TauI GCSGC 4 cut(s) 8, 176, 179, 614
TfiI GAWTC 5 cut(s) 254, 274, 1156, 1188, 1363
Tru1I TTAA 2 cut(s) 696, 1404
Tru9I TTAA 2 cut(s) 696, 1404
TscAI CASTG 5 cut(s) 24, 372, 742, 820, 1067
TseI GCWGC 2 cut(s) 244, 893
TspDTI ATGAA 7 cut(s) 49, 713, 807, 872, 1017, 1191, 1477
TspGWI ACGGA 1 cut(s) 657
TspRI CASTG 5 cut(s) 24, 372, 742, 820, 1067
VneI GTGCAC 1 cut(s) 404
VpaK11BI GGWCC 2 cut(s) 268, 672
XceI RCATGY 2 cut(s) 1060, 1499
XmiI GTMKAC 2 cut(s) 1083, 1222
XmnI GAANNNNTTC 1 cut(s) 663
XspI CTAG 1 cut(s) 783
Zsp2I ATGCAT 1 cut(s) 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.