MD03G1110900.v1.1

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0015929
Physical Location & Seq
Forward (+)
9685296 .. 9686894
1599 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1110900.v1.1.491

Sequence Viewer

Length: 1599 bp
ATGAAAAACTTCCAAGAGAAAAACAAGGACCTCAAAGAAGATTATGAAGAAGAAGATCAAGAAATCATGGATGATGATGATGTACATGCACAAGAGATTGAAGAACAAGTAGCGCTACGTGGCGATGATTATCATAAGGGTAAACAAGTAGTACTAGACAGTGATGTTCATCATCGAAGTGGAGATCGGGTTTGTGAGCAATGTGGGAAGAGATTTCAAAATGGAAAAGCTTTGGGAGGTCACAGAAAGGTTCATCTCAATCAGTCTCTTCTTCCCAAGAAGAACAAAGCATTGTTTAAGCAGAAGAAGAAACACGGTTCTTCCAAAGGCGGCAGCAGCAGTGAAGTCTCGTGCTACGTTTGCAAAAAGGATTTCCCATCTATCAAATCCTTGCACGGACACATGAGACTCCATCGCGAAAGAGACTGGAAGGGTGTCAGACCTCCTGGGGCTGTTCAGCCTCTTTCCGAAGAAAGTAAATCTTCTTCATACGAAATTGGCTCCGATGATGATTGTGACGATGACGACAATGATGACGGCTATCGTGATAGTAGTTTTTCTGATCACACCATAGATACAGACAATGATGCAGCAATTTTTTTAGTAAACTGGAGGAATATTGAACAAAGACGCAGGATTGCTTACCAAAGAGATCCTAATGGTGAAGACAAAGTTGGTGAATTCGGACTGAAGAAGCTAATAGAAGAGTCACCAGTTGGATACAAAGGTAACCCTTCATCCAAGAACATCAAATTTGATGATGATAGTAAGAAAATTACCATGGAGGGAAGTAAAAGTTTTGGAGGTGCAAAACCCAAAAAAGATTTCAGCTTGTTTGGTCAAACCCACAAGCAAATTTCAAGGAAGCCTCAAGAGTTTAGAGTCACAAGATCAGATGCAACGTTGAGTGACATGAATGTAGACGAATCAGCCGGGTTTAGTAGTAAATATGCAGCTCACCAAGTTAGTGAATCGGCATTGGAGAAGGCAATAGAAGAGTCACCTGGTGGATACAAAGGCAATAAAACTTCGGAGAAAAGTAGGTCTGAGAGTGTGAATTTCGTGCCGAATAAGTTAAGCATTGGAGGTAAAGAAAAGGCTTCTGTGGATGATGATGATGATGGTCACGACGACAACGATGAGAATGTTGATCAGACTAGTTGGAAGGTGAAGCTGAAAAAGGCGATGAAGGAGGTTTCGAAAACAGGTAAAAAACCCACCAAAGACGCGGCTTTAAATGATCAAACCCACTACCAGATTTCACGAAGAACTCAGGAATTTGGTGCGAAGTATGCTGAAAGAGAAAATTACAATGGCCCTAGCGCTACCTGTAACCAGGTACTTGAAAGAGCAGAAGAAGCTGAAGCAGTGGAGCACGAGACCAAAGAGTTTGTGTGCAACATCTGCCCCTGCAAGTTCTCAACAGGTCAGGCTCCGGGAGGCCACAAGAGATGTCACAACTATAGAGTGCCGGTGGAAGAAGCTCCGGAGACAGCAGAAGTAGCACCGGTGGCTGAAGAAGACGGTGAGATCACTACTGTTCCTGAAAAACTAGACTTGGATCTCAATCAACTTCCTTACGAATCAAACGATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2_6

Protein Analysis

533

Amino Acids

59.77

Weight (kDa)

5.44

Isoelectric Point (pI)

50.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C2H2_6 PF13912 64 - 85 2.2e-06 C2H2-type zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015929)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26940 AT5G56200
fragaria_vesca FvH4_5g31390
malus_domestica MD03G1110900.v1.1 MD11G1124800.v1.1
prunus_persica Prupe.6G093500_v2.0.a1
rosa_laevigata RLG00000001711
rosa_multiflora Rmu_sc0000534.1_g000007
rosa_rugosa Rorug07G0239000
rosa_samantha Rh7AG386400 Rh7BG373000 Rh7CG405700 Rh7DG385100
rosa_wichuraiana Rw0G018440 Rw7G032440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 921
AccII CGCG 2 cut(s) 417, 1229
AccIII TCCGGA 1 cut(s) 1486
AciI CCGC 2 cut(s) 330, 1229
AclI AACGTT 1 cut(s) 902
AclWI GGATC 2 cut(s) 647, 1569
AcsI RAATTY 5 cut(s) 680, 752, 855, 1057, 1277
AcuI CTGAAG 3 cut(s) 710, 1383, 1536
AdeI CACNNNGTG 1 cut(s) 1007
AfaI GTAC 3 cut(s) 84, 153, 1341
AfeI AGCGCT 2 cut(s) 114, 1324
AgeI ACCGGT 1 cut(s) 1507
AgsI TTSAA 5 cut(s) 101, 218, 623, 861, 1346
AhlI ACTAGT 1 cut(s) 1157
AjnI CCWGG 3 cut(s) 445, 1003, 1335
AjuI GAANNNNNNNTTGG 4 cut(s) 657, 689, 809, 841
AluBI AGCT 7 cut(s) 230, 697, 831, 956, 1174, 1361, 1484
AluI AGCT 7 cut(s) 230, 697, 831, 956, 1174, 1361, 1484
Alw21I GWGCWC 1 cut(s) 1377
Alw26I GTCTC 6 cut(s) 270, 352, 400, 417, 1373, 1484
AlwI GGATC 2 cut(s) 647, 1569
Aor13HI TCCGGA 1 cut(s) 1486
Aor51HI AGCGCT 2 cut(s) 114, 1324
AoxI GGCC 2 cut(s) 1315, 1441
ApeKI GCWGC 4 cut(s) 333, 336, 590, 953
ApoI RAATTY 5 cut(s) 680, 752, 855, 1057, 1277
AsiGI ACCGGT 1 cut(s) 1507
Asp700I GAANNNNTTC 1 cut(s) 8
AspLEI GCGC 2 cut(s) 115, 1325
AspS9I GGNCC 2 cut(s) 28, 1316
AsuC2I CCSGG 2 cut(s) 934, 1437
AsuHPI GGTGA 7 cut(s) 674, 689, 702, 950, 993, 1180, 1538
AsuII TTCGAA 1 cut(s) 1199
AvaII GGWCC 1 cut(s) 28
BaeI ACNNNNGTAYC 2 cut(s) 712, 745
BarI GAAGNNNNNNTAC 2 cut(s) 469, 501
BauI CACGAG 2 cut(s) 349, 1376
BbsI GAAGAC 2 cut(s) 672, 1527
Bbv12I GWGCWC 1 cut(s) 1377
BbvI GCAGC 4 cut(s) 345, 348, 602, 965
BccI CCATC 3 cut(s) 385, 420, 1115
BceAI ACGGC 1 cut(s) 553
BciT130I CCWGG 3 cut(s) 447, 1005, 1337
BciVI GTATCC 2 cut(s) 713, 1004
BclI TGATCA 3 cut(s) 562, 1150, 1240
BcnI CCSGG 2 cut(s) 934, 1437
BcoDI GTCTC 6 cut(s) 270, 352, 400, 417, 1373, 1484
BcuI ACTAGT 1 cut(s) 1157
BfaI CTAG 4 cut(s) 155, 1158, 1320, 1553
BfmI CTRYAG 1 cut(s) 1462
BfoI RGCGCY 2 cut(s) 116, 1326
BfuI GTATCC 2 cut(s) 713, 1004
BisI GCNGC 6 cut(s) 331, 334, 337, 591, 954, 1230
BlsI GCNGC 6 cut(s) 332, 335, 338, 592, 955, 1231
BmcAI AGTACT 1 cut(s) 153
Bme1390I CCNGG 5 cut(s) 447, 934, 1005, 1337, 1437
Bme18I GGWCC 1 cut(s) 28
BmgT120I GGNCC 2 cut(s) 28, 1316
BmiI GGNNCC 2 cut(s) 502, 1434
BmrFI CCNGG 5 cut(s) 447, 934, 1005, 1337, 1437
BmsI GCATC 2 cut(s) 577, 886
BpiI GAAGAC 2 cut(s) 672, 1527
BpmI CTGGAG 1 cut(s) 631
Bpu14I TTCGAA 1 cut(s) 1199
BpuEI CTTGAG 1 cut(s) 855
BpuMI CCSGG 2 cut(s) 934, 1437
BsaAI YACGTR 1 cut(s) 119
BsaBI GATNNNNATC 3 cut(s) 129, 168, 1566
BsaI GGTCTC 1 cut(s) 1373
BsaJI CCNNGG 2 cut(s) 446, 780
BsaWI WCCGGW 2 cut(s) 1486, 1507
BsaXI ACNNNNNCTCC 2 cut(s) 174, 204
Bse118I RCCGGY 2 cut(s) 1471, 1507
Bse1I ACTGG 3 cut(s) 431, 614, 713
Bse3DI GCAATG 1 cut(s) 206
Bse8I GATNNNNATC 3 cut(s) 129, 168, 1566
BseAI TCCGGA 1 cut(s) 1486
BseBI CCWGG 3 cut(s) 447, 1005, 1337
BseDI CCNNGG 2 cut(s) 446, 780
BseGI GGATG 3 cut(s) 76, 737, 1114
BseJI GATNNNNATC 3 cut(s) 129, 168, 1566
BseMI GCAATG 1 cut(s) 206
BseMII CTCAG 2 cut(s) 1038, 1286
BseNI ACTGG 3 cut(s) 431, 614, 713
BseXI GCAGC 4 cut(s) 345, 348, 602, 965
Bsh1236I CGCG 2 cut(s) 417, 1229
BshFI GGCC 2 cut(s) 1317, 1443
BshTI ACCGGT 1 cut(s) 1507
BsiHKAI GWGCWC 1 cut(s) 1377
BsiSI CCGG 5 cut(s) 933, 1436, 1472, 1487, 1508
BsmAI GTCTC 6 cut(s) 270, 352, 400, 417, 1373, 1484
BsnI GGCC 2 cut(s) 1317, 1443
Bso31I GGTCTC 1 cut(s) 1373
Bsp119I TTCGAA 1 cut(s) 1199
Bsp1286I GDGCHC 1 cut(s) 1377
Bsp13I TCCGGA 1 cut(s) 1486
Bsp1407I TGTACA 1 cut(s) 82
Bsp143I GATC 9 cut(s) 55, 184, 562, 652, 890, 1150, 1240, 1530, 1561
Bsp19I CCATGG 1 cut(s) 780
Bsp68I TCGCGA 1 cut(s) 417
BspACI CCGC 2 cut(s) 330, 1229
BspANI GGCC 2 cut(s) 1317, 1443
BspCNI CTCAG 2 cut(s) 1039, 1285
BspEI TCCGGA 1 cut(s) 1486
BspFNI CGCG 2 cut(s) 417, 1229
BspLI GGNNCC 2 cut(s) 502, 1434
BspPI GGATC 2 cut(s) 647, 1569
BspT104I TTCGAA 1 cut(s) 1199
BspTNI GGTCTC 1 cut(s) 1373
BsrDI GCAATG 1 cut(s) 206
BsrFI RCCGGY 2 cut(s) 1471, 1507
BsrGI TGTACA 1 cut(s) 82
BsrI ACTGG 3 cut(s) 431, 614, 713
BssAI RCCGGY 2 cut(s) 1471, 1507
BssECI CCNNGG 2 cut(s) 446, 780
BssMI GATC 9 cut(s) 55, 184, 562, 652, 890, 1150, 1240, 1530, 1561
BssSI CACGAG 2 cut(s) 349, 1376
BssT1I CCWWGG 1 cut(s) 780
Bst2BI CACGAG 2 cut(s) 349, 1376
Bst2UI CCWGG 3 cut(s) 447, 1005, 1337
Bst4CI ACNGT 4 cut(s) 161, 317, 1526, 1540
Bst6I CTCTTC 4 cut(s) 203, 273, 699, 990
BstAPI GCANNNNNTGC 1 cut(s) 1404
BstAUI TGTACA 1 cut(s) 82
BstBAI YACGTR 1 cut(s) 119
BstBI TTCGAA 1 cut(s) 1199
BstDEI CTNAG 2 cut(s) 1047, 1272
BstDSI CCRYGG 1 cut(s) 780
BstEII GGTNACC 1 cut(s) 728
BstF5I GGATG 3 cut(s) 76, 737, 1114
BstFNI CGCG 2 cut(s) 417, 1229
BstH2I RGCGCY 2 cut(s) 116, 1326
BstHHI GCGC 2 cut(s) 115, 1325
BstKTI GATC 9 cut(s) 58, 187, 565, 655, 893, 1153, 1243, 1533, 1564
BstMAI GTCTC 6 cut(s) 270, 352, 400, 417, 1373, 1484
BstMBI GATC 9 cut(s) 55, 184, 562, 652, 890, 1150, 1240, 1530, 1561
BstMWI GCNNNNNNNGC 7 cut(s) 336, 360, 1292, 1358, 1404, 1502, 1511
BstNI CCWGG 3 cut(s) 447, 1005, 1337
BstNSI RCATGY 1 cut(s) 89
BstPI GGTNACC 1 cut(s) 728
BstSCI CCNGG 5 cut(s) 445, 932, 1003, 1335, 1435
BstSFI CTRYAG 1 cut(s) 1462
BstUI CGCG 2 cut(s) 417, 1229
BstV1I GCAGC 4 cut(s) 345, 348, 602, 965
BstV2I GAAGAC 2 cut(s) 672, 1527
BstX2I RGATCY 2 cut(s) 652, 1561
BstYI RGATCY 2 cut(s) 652, 1561
BsuI GTATCC 2 cut(s) 713, 1004
BsuRI GGCC 2 cut(s) 1317, 1443
BtgI CCRYGG 1 cut(s) 780
BtgZI GCGATG 3 cut(s) 138, 398, 1199
BtsCI GGATG 3 cut(s) 76, 737, 1114
BtsI GCAGTG 2 cut(s) 346, 1374
BtsIMutI CAGTG 3 cut(s) 166, 346, 1374
BtuMI TCGCGA 1 cut(s) 417
CfoI GCGC 2 cut(s) 115, 1325
Cfr10I RCCGGY 2 cut(s) 1471, 1507
Cfr13I GGNCC 2 cut(s) 28, 1316
CseI GACGC 2 cut(s) 639, 1235
CsiI ACCWGGT 2 cut(s) 1003, 1335
Csp6I GTAC 3 cut(s) 83, 152, 1340
CspAI ACCGGT 1 cut(s) 1507
CviAII CATG 5 cut(s) 67, 86, 403, 781, 913
CviQI GTAC 3 cut(s) 83, 152, 1340
DdeI CTNAG 2 cut(s) 1047, 1272
DpnI GATC 9 cut(s) 57, 186, 564, 654, 892, 1152, 1242, 1532, 1563
DpnII GATC 9 cut(s) 55, 184, 562, 652, 890, 1150, 1240, 1530, 1561
DraI TTTAAA 1 cut(s) 1236
DraIII CACNNNGTG 1 cut(s) 1007
Eam1104I CTCTTC 4 cut(s) 203, 273, 699, 990
EarI CTCTTC 4 cut(s) 203, 273, 699, 990
Eco130I CCWWGG 1 cut(s) 780
Eco31I GGTCTC 1 cut(s) 1373
Eco47I GGWCC 1 cut(s) 28
Eco47III AGCGCT 2 cut(s) 114, 1324
Eco57I CTGAAG 3 cut(s) 710, 1383, 1536
Eco91I GGTNACC 1 cut(s) 728
EcoO109I RGGNCCY 1 cut(s) 28
EcoO65I GGTNACC 1 cut(s) 728
EcoRI GAATTC 1 cut(s) 680
EcoRII CCWGG 3 cut(s) 445, 1003, 1335
EcoT14I CCWWGG 1 cut(s) 780
ErhI CCWWGG 1 cut(s) 780
FaeI CATG 5 cut(s) 70, 89, 406, 784, 916
FalI AAGNNNNNCTT 2 cut(s) 466, 498
FatI CATG 5 cut(s) 66, 85, 402, 780, 912
FbaI TGATCA 3 cut(s) 562, 1150, 1240
FblI GTMKAC 1 cut(s) 921
Fnu4HI GCNGC 6 cut(s) 331, 334, 337, 591, 954, 1230
FokI GGATG 3 cut(s) 83, 724, 1121
Fsp4HI GCNGC 6 cut(s) 331, 334, 337, 591, 954, 1230
FspBI CTAG 4 cut(s) 155, 1158, 1320, 1553
GlaI GCGC 2 cut(s) 114, 1324
GluI GCNGC 6 cut(s) 331, 334, 337, 591, 954, 1230
GsuI CTGGAG 1 cut(s) 631
HaeII RGCGCY 2 cut(s) 116, 1326
HaeIII GGCC 2 cut(s) 1317, 1443
HapII CCGG 5 cut(s) 933, 1436, 1472, 1487, 1508
HgaI GACGC 2 cut(s) 639, 1235
HhaI GCGC 2 cut(s) 115, 1325
Hin1II CATG 5 cut(s) 70, 89, 406, 784, 916
Hin6I GCGC 2 cut(s) 113, 1323
HinP1I GCGC 2 cut(s) 113, 1323
HindIII AAGCTT 1 cut(s) 228
HinfI GANTC 7 cut(s) 408, 707, 882, 926, 971, 998, 1583
HpaII CCGG 5 cut(s) 933, 1436, 1472, 1487, 1508
HphI GGTGA 7 cut(s) 674, 689, 702, 950, 993, 1180, 1538
Hpy166II GTNNAC 3 cut(s) 143, 607, 922
Hpy188I TCNGA 9 cut(s) 440, 469, 505, 562, 686, 895, 1033, 1048, 1155
Hpy188III TCNNGA 9 cut(s) 59, 416, 545, 872, 1127, 1263, 1274, 1487, 1544
Hpy8I GTNNAC 3 cut(s) 143, 607, 922
Hpy99I CGWCG 1 cut(s) 1133
HpyAV CCTTC 5 cut(s) 424, 744, 979, 1159, 1183
HpyCH4III ACNGT 4 cut(s) 161, 317, 1526, 1540
HpyCH4IV ACGT 3 cut(s) 118, 357, 902
HpyCH4V TGCA 9 cut(s) 89, 363, 394, 590, 809, 899, 953, 1398, 1413
HpyF10VI GCNNNNNNNGC 7 cut(s) 336, 360, 1292, 1358, 1404, 1502, 1511
HpyF3I CTNAG 2 cut(s) 1047, 1272
HpySE526I ACGT 3 cut(s) 118, 357, 902
Hsp92II CATG 5 cut(s) 70, 89, 406, 784, 916
HspAI GCGC 2 cut(s) 113, 1323
Kpn2I TCCGGA 1 cut(s) 1486
Ksp22I TGATCA 3 cut(s) 562, 1150, 1240
Kzo9I GATC 9 cut(s) 55, 184, 562, 652, 890, 1150, 1240, 1530, 1561
LmnI GCTCC 4 cut(s) 506, 1372, 1438, 1489
Lsp1109I GCAGC 4 cut(s) 345, 348, 602, 965
LweI GCATC 2 cut(s) 577, 886
MabI ACCWGGT 2 cut(s) 1003, 1335
MaeI CTAG 4 cut(s) 155, 1158, 1320, 1553
MaeII ACGT 3 cut(s) 118, 357, 902
MalI GATC 9 cut(s) 57, 186, 564, 654, 892, 1152, 1242, 1532, 1563
MboI GATC 9 cut(s) 55, 184, 562, 652, 890, 1150, 1240, 1530, 1561
MflI RGATCY 2 cut(s) 652, 1561
MhlI GDGCHC 1 cut(s) 1377
MluCI AATT 9 cut(s) 495, 594, 680, 752, 774, 855, 1057, 1277, 1306
MlyI GAGTC 4 cut(s) 402, 716, 891, 1007
MmeI TCCRAC 2 cut(s) 697, 1142
MroI TCCGGA 1 cut(s) 1486
MroXI GAANNNNTTC 1 cut(s) 8
MseI TTAA 3 cut(s) 297, 1076, 1235
MslI CAYNNNNRTG 1 cut(s) 177
MspI CCGG 5 cut(s) 933, 1436, 1472, 1487, 1508
MspR9I CCNGG 5 cut(s) 447, 934, 1005, 1337, 1437
MvaI CCWGG 3 cut(s) 447, 1005, 1337
MvnI CGCG 2 cut(s) 417, 1229
MwoI GCNNNNNNNGC 7 cut(s) 336, 360, 1292, 1358, 1404, 1502, 1511
NciI CCSGG 2 cut(s) 934, 1437
NcoI CCATGG 1 cut(s) 780
NdeII GATC 9 cut(s) 55, 184, 562, 652, 890, 1150, 1240, 1530, 1561
NlaIII CATG 5 cut(s) 70, 89, 406, 784, 916
NlaIV GGNNCC 2 cut(s) 502, 1434
NmuCI GTSAC 8 cut(s) 239, 515, 708, 883, 908, 999, 1124, 1454
NruI TCGCGA 1 cut(s) 417
NspI RCATGY 1 cut(s) 89
NspV TTCGAA 1 cut(s) 1199
PcsI WCGNNNNNNNCGW 2 cut(s) 1134, 1587
PdmI GAANNNNTTC 1 cut(s) 8
PfeI GAWTC 3 cut(s) 926, 971, 1583
PfoI TCCNGGA 1 cut(s) 1435
PinAI ACCGGT 1 cut(s) 1507
PkrI GCNGC 6 cut(s) 332, 335, 338, 592, 955, 1231
PleI GAGTC 4 cut(s) 402, 715, 890, 1006
PpsI GAGTC 4 cut(s) 402, 715, 890, 1006
Ppu21I YACGTR 1 cut(s) 119
PpuMI RGGWCCY 1 cut(s) 28
Psp1406I AACGTT 1 cut(s) 902
Psp5II RGGWCCY 1 cut(s) 28
Psp6I CCWGG 3 cut(s) 445, 1003, 1335
PspEI GGTNACC 1 cut(s) 728
PspGI CCWGG 3 cut(s) 445, 1003, 1335
PspN4I GGNNCC 2 cut(s) 502, 1434
PspPI GGNCC 2 cut(s) 28, 1316
PspPPI RGGWCCY 1 cut(s) 28
PsuI RGATCY 2 cut(s) 652, 1561
RruI TCGCGA 1 cut(s) 417
RsaI GTAC 3 cut(s) 84, 153, 1341
RsaNI GTAC 3 cut(s) 83, 152, 1340
RseI CAYNNNNRTG 1 cut(s) 177
SaqAI TTAA 3 cut(s) 297, 1076, 1235
SatI GCNGC 6 cut(s) 331, 334, 337, 591, 954, 1230
Sau3AI GATC 9 cut(s) 55, 184, 562, 652, 890, 1150, 1240, 1530, 1561
Sau96I GGNCC 2 cut(s) 28, 1316
ScaI AGTACT 1 cut(s) 153
SchI GAGTC 4 cut(s) 402, 716, 891, 1007
ScrFI CCNGG 5 cut(s) 447, 934, 1005, 1337, 1437
SduI GDGCHC 1 cut(s) 1377
SexAI ACCWGGT 2 cut(s) 1003, 1335
SfaNI GCATC 2 cut(s) 577, 886
SfcI CTRYAG 1 cut(s) 1462
SfuI TTCGAA 1 cut(s) 1199
SgrAI CRCCGGYG 1 cut(s) 1507
SinI GGWCC 1 cut(s) 28
SmiMI CAYNNNNRTG 1 cut(s) 177
SmlI CTYRAG 1 cut(s) 870
SmoI CTYRAG 1 cut(s) 870
SpeI ACTAGT 1 cut(s) 1157
Sse9I AATT 9 cut(s) 495, 594, 680, 752, 774, 855, 1057, 1277, 1306
SsiI CCGC 2 cut(s) 330, 1229
SspI AATATT 1 cut(s) 619
SspMI CTAG 4 cut(s) 155, 1158, 1320, 1553
StyD4I CCNGG 5 cut(s) 445, 932, 1003, 1335, 1435
StyI CCWWGG 1 cut(s) 780
TaaI ACNGT 4 cut(s) 161, 317, 1526, 1540
TaiI ACGT 3 cut(s) 121, 360, 905
TaqI TCGA 2 cut(s) 175, 1199
TasI AATT 9 cut(s) 495, 594, 680, 752, 774, 855, 1057, 1277, 1306
TatI WGTACW 2 cut(s) 82, 151
TauI GCSGC 2 cut(s) 333, 1232
TfiI GAWTC 3 cut(s) 926, 971, 1583
Tru1I TTAA 3 cut(s) 297, 1076, 1235
Tru9I TTAA 3 cut(s) 297, 1076, 1235
TscAI CASTG 3 cut(s) 166, 346, 1374
TseFI GTSAC 8 cut(s) 239, 515, 708, 883, 908, 999, 1124, 1454
TseI GCWGC 4 cut(s) 333, 336, 590, 953
Tsp45I GTSAC 8 cut(s) 239, 515, 708, 883, 908, 999, 1124, 1454
TspDTI ATGAA 8 cut(s) 17, 60, 158, 242, 477, 726, 929, 1202
TspGWI ACGGA 1 cut(s) 411
TspRI CASTG 3 cut(s) 166, 346, 1374
VpaK11BI GGWCC 1 cut(s) 28
XapI RAATTY 5 cut(s) 680, 752, 855, 1057, 1277
XceI RCATGY 1 cut(s) 89
XmiI GTMKAC 1 cut(s) 921
XmnI GAANNNNTTC 1 cut(s) 8
XspI CTAG 4 cut(s) 155, 1158, 1320, 1553
ZrmI AGTACT 1 cut(s) 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.