MD03G1159900.v1.1

Adipocyte plasma membrane-associated

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
19094995 .. 19100441
5447 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1159900.v1.1.491

Sequence Viewer

Length: 1353 bp
ATGGCTCTAAACACCTCCTATCTACCGCTCTTGATTGTACCACCTACCCTTCTTCCAACTTCCTCTTCCCGTTTTCTTAAACTTGGCATCTTCTCTCTCAAATCCTCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTGCTACCGGAGGTGGGAGACGATGAAGCCCAGCAGAGTACTGGCGGCTCTGTTCCTTTTGGTGGCTGTCTACTGCGGAATCGACCCTTTTAAGCACAGTGCAATTGTGGAATTCCCGGACTTCCAAGCCCATAAGGTGGAGATGCCGCCGTGGTCCTTGGTTCCGGAAGACAAAGACACCGAGAACCTCCTGCAGAAATCGGAGATTAGGTTCCTTAACCAAGTGCAAGGCCCTGAGAGCGTCACCTTTGACCCGCTTGGCCGCGGACCTTACACCGGCGTTGCTGATGGCAGAGTGTTGTTCTGGAATGGCCAAGCTTGGACTGATTTCGCCTATACTTCGCCTCACAGGTCAGATATATGTAGCCCAAAGCCATCACCTTTGAGTTACTTGAAGAATGAGCACATCTGTGGAAGGCCTCTGGGGCTACGCTTTGACAAGAAAACTGGTGATTTATACATCGCAGATGCATATCTTGGTCTGTTGAAGGTGGGGCCAGAAGGTGGTTTGGCAACTTCACTTACGACGGAGGCAGAAGGGGTGCCGCTAAGGTTTACTAATGATCTTGACATTGATGAAGAAGGGAATATTTATTTTACAGATAGTAGCACCATGTACCAGAGGAGGAACTTCATGCAATTGGTTTTCTCCGGGGAGGACACTGGGAGGGTTCTAAAATACAACCCAACCACAAAGGAAACAACTGTTCTTCAGAGGAATATCCGATTTCCAAATGGTCTGTCTCTGAGCAAGGATGGTTCCTTCTTTCTCTTTTGTGAAGGAGCCGTGGGCAGATTACGCAAGTACTGGTTGAAGGGTGAAAAAGCAGGAACTTCAGAAGTATTTGCAGTGCTGCCGGGATTTCCAGACAATGTCAGAACTAACGAAAATGGTGAATTTTGGGTGGCACTCCACTGCCGCCGGAATTTGTACACTCATATTTGTGCTGCATTCCCACAATTAAGGAAATTCTTACTCAAGCTTCCAGTTCCATCACGGATTCAGTTCCTGCTTCACATTGGAGGCCGACTCCATGCAGTGGTTGTGAAATACAGCCCAGAGGGTAAGATTTTGCAAATATTGGAAGATAGCGAGGGGAAGGTTGTTAAAGCTGTGAGTGAAGTTGAAGAAAAGGATGGAAAGTTATGGATGGGGAGTGTTCTGATGCCCTTCATAGCAGTCTACGACTTAGATTGA

Protein Analysis

451

Amino Acids

50.42

Weight (kDa)

8.05

Isoelectric Point (pI)

45.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SGL PF08450 192 - 356 1.6e-12 SMP-30/Gluconolactonase/LRE-like region
Str_synth PF03088 239 - 326 5.1e-30 Strictosidine synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011049)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 697
AccB7I CCANNNNNTGG 3 cut(s) 292, 659, 1195
AccBSI CCGCTC 1 cut(s) 28
AccI GTMKAC 2 cut(s) 225, 1338
AccII CGCG 1 cut(s) 420
AccIII TCCGGA 1 cut(s) 319
AciI CCGC 9 cut(s) 26, 200, 231, 302, 410, 418, 420, 701, 1075
AcoI YGGCCR 2 cut(s) 415, 466
AcsI RAATTY 4 cut(s) 266, 1052, 1081, 1124
AcuI CTGAAG 2 cut(s) 851, 975
AfaI GTAC 5 cut(s) 39, 195, 773, 962, 1088
AfiI CCNNNNNNNGG 6 cut(s) 169, 217, 292, 431, 659, 1195
AgsI TTSAA 4 cut(s) 550, 643, 970, 1283
AjuI GAANNNNNNNTTGG 2 cut(s) 49, 81
AleI CACNNNNGTG 1 cut(s) 564
AloI GAACNNNNNNTCC 2 cut(s) 350, 382
AluBI AGCT 4 cut(s) 156, 473, 1138, 1268
AluI AGCT 4 cut(s) 156, 473, 1138, 1268
Alw21I GWGCWC 1 cut(s) 561
Alw26I GTCTC 2 cut(s) 167, 903
AlwNI CAGNNNCTG 1 cut(s) 1165
Aor13HI TCCGGA 1 cut(s) 319
AoxI GGCC 6 cut(s) 385, 415, 466, 572, 650, 1180
ApeKI GCWGC 3 cut(s) 156, 1009, 1103
ApoI RAATTY 4 cut(s) 266, 1052, 1081, 1124
ArsI GACNNNNNNTTYG 2 cut(s) 881, 913
AspS9I GGNCC 4 cut(s) 309, 386, 422, 650
AsuC2I CCSGG 3 cut(s) 272, 808, 1014
AsuHPI GGTGA 6 cut(s) 99, 391, 525, 617, 986, 1061
AvaII GGWCC 2 cut(s) 309, 422
BalI TGGCCA 1 cut(s) 468
BanI GGYRCC 1 cut(s) 697
BbsI GAAGAC 1 cut(s) 330
Bbv12I GWGCWC 1 cut(s) 561
BbvI GCAGC 3 cut(s) 143, 996, 1090
BccI CCATC 6 cut(s) 437, 538, 905, 1156, 1286, 1300
BceAI ACGGC 2 cut(s) 289, 926
BcnI CCSGG 3 cut(s) 272, 808, 1014
BcoDI GTCTC 2 cut(s) 167, 903
BfaI CTAG 1 cut(s) 153
BfmI CTRYAG 1 cut(s) 347
BglI GCCNNNNNGGC 1 cut(s) 580
BisI GCNGC 8 cut(s) 157, 201, 302, 418, 701, 1010, 1075, 1104
BlsI GCNGC 8 cut(s) 158, 202, 303, 419, 702, 1011, 1076, 1105
BmcAI AGTACT 2 cut(s) 195, 962
Bme1390I CCNGG 3 cut(s) 272, 808, 1014
Bme18I GGWCC 2 cut(s) 309, 422
BmgT120I GGNCC 4 cut(s) 309, 386, 422, 650
BmiI GGNNCC 6 cut(s) 318, 368, 651, 699, 916, 940
BmrFI CCNGG 3 cut(s) 272, 808, 1014
BmrI ACTGGG 1 cut(s) 828
BmsI GCATC 4 cut(s) 96, 288, 613, 1311
BmuI ACTGGG 1 cut(s) 828
BpiI GAAGAC 1 cut(s) 330
BplI GAGNNNNNCTC 2 cut(s) 1170, 1202
Bpu10I CCTNAGC 1 cut(s) 704
BpuEI CTTGAG 1 cut(s) 1118
BpuMI CCSGG 3 cut(s) 272, 808, 1014
BsaBI GATNNNNATC 1 cut(s) 627
BsaJI CCNNGG 5 cut(s) 305, 312, 418, 807, 942
BsaWI WCCGGW 2 cut(s) 162, 319
BsaXI ACNNNNNCTCC 2 cut(s) 350, 380
Bsc4I CCNNNNNNNGG 6 cut(s) 169, 217, 292, 431, 659, 1195
Bse118I RCCGGY 1 cut(s) 431
Bse1I ACTGG 5 cut(s) 201, 607, 823, 968, 1142
Bse8I GATNNNNATC 1 cut(s) 627
BseAI TCCGGA 1 cut(s) 319
BseDI CCNNGG 5 cut(s) 305, 312, 418, 807, 942
BseGI GGATG 3 cut(s) 916, 1297, 1311
BseJI GATNNNNATC 1 cut(s) 627
BseLI CCNNNNNNNGG 6 cut(s) 169, 217, 292, 431, 659, 1195
BseMII CTCAG 2 cut(s) 381, 893
BseNI ACTGG 5 cut(s) 201, 607, 823, 968, 1142
BseRI GAGGAG 1 cut(s) 793
BseXI GCAGC 3 cut(s) 143, 996, 1090
BseYI CCCAGC 1 cut(s) 185
Bsh1236I CGCG 1 cut(s) 420
BshFI GGCC 6 cut(s) 387, 417, 468, 574, 652, 1182
BshNI GGYRCC 1 cut(s) 697
BsiHKAI GWGCWC 1 cut(s) 561
BsiSI CCGG 7 cut(s) 163, 272, 320, 432, 807, 1013, 1078
BslI CCNNNNNNNGG 6 cut(s) 169, 217, 292, 431, 659, 1195
BsmAI GTCTC 2 cut(s) 167, 903
BsmBI CGTCTC 1 cut(s) 167
BsmI GAATGC 1 cut(s) 1106
BsnI GGCC 6 cut(s) 387, 417, 468, 574, 652, 1182
Bsp1286I GDGCHC 1 cut(s) 561
Bsp13I TCCGGA 1 cut(s) 319
Bsp1407I TGTACA 1 cut(s) 1086
Bsp143I GATC 1 cut(s) 718
BspACI CCGC 9 cut(s) 26, 200, 231, 302, 410, 418, 420, 701, 1075
BspANI GGCC 6 cut(s) 387, 417, 468, 574, 652, 1182
BspCNI CTCAG 2 cut(s) 382, 894
BspEI TCCGGA 1 cut(s) 319
BspFNI CGCG 1 cut(s) 420
BspLI GGNNCC 6 cut(s) 318, 368, 651, 699, 916, 940
BspMAI CTGCAG 1 cut(s) 351
BspT107I GGYRCC 1 cut(s) 697
BsrBI CCGCTC 1 cut(s) 28
BsrFI RCCGGY 1 cut(s) 431
BsrGI TGTACA 1 cut(s) 1086
BsrI ACTGG 5 cut(s) 201, 607, 823, 968, 1142
BssAI RCCGGY 1 cut(s) 431
BssECI CCNNGG 5 cut(s) 305, 312, 418, 807, 942
BssMI GATC 1 cut(s) 718
BssT1I CCWWGG 1 cut(s) 312
Bst4CI ACNGT 2 cut(s) 254, 862
Bst6I CTCTTC 1 cut(s) 70
BstAUI TGTACA 1 cut(s) 1086
BstDEI CTNAG 4 cut(s) 390, 704, 902, 1345
BstDSI CCRYGG 3 cut(s) 305, 418, 942
BstF5I GGATG 3 cut(s) 916, 1297, 1311
BstFNI CGCG 1 cut(s) 420
BstKTI GATC 1 cut(s) 721
BstMAI GTCTC 2 cut(s) 167, 903
BstMBI GATC 1 cut(s) 718
BstMWI GCNNNNNNNGC 3 cut(s) 393, 580, 954
BstSCI CCNGG 3 cut(s) 270, 806, 1012
BstSFI CTRYAG 1 cut(s) 347
BstUI CGCG 1 cut(s) 420
BstV1I GCAGC 3 cut(s) 143, 996, 1090
BstV2I GAAGAC 1 cut(s) 330
BsuRI GGCC 6 cut(s) 387, 417, 468, 574, 652, 1182
BtgI CCRYGG 3 cut(s) 305, 418, 942
BtgZI GCGATG 1 cut(s) 601
BtsCI GGATG 3 cut(s) 916, 1297, 1311
BtsI GCAGTG 3 cut(s) 1011, 1069, 1200
BtsIMutI CAGTG 5 cut(s) 259, 816, 1011, 1069, 1200
CaiI CAGNNNCTG 1 cut(s) 1165
Cfr10I RCCGGY 1 cut(s) 431
Cfr13I GGNCC 4 cut(s) 309, 386, 422, 650
Cfr42I CCGCGG 1 cut(s) 421
CseI GACGC 1 cut(s) 385
Csp6I GTAC 5 cut(s) 38, 194, 772, 961, 1087
CviAII CATG 3 cut(s) 769, 790, 1190
CviQI GTAC 5 cut(s) 38, 194, 772, 961, 1087
DdeI CTNAG 4 cut(s) 390, 704, 902, 1345
DpnI GATC 1 cut(s) 720
DpnII GATC 1 cut(s) 718
EaeI YGGCCR 2 cut(s) 415, 466
Eam1104I CTCTTC 1 cut(s) 70
EarI CTCTTC 1 cut(s) 70
Eco130I CCWWGG 1 cut(s) 312
Eco147I AGGCCT 1 cut(s) 574
Eco47I GGWCC 2 cut(s) 309, 422
Eco57I CTGAAG 2 cut(s) 851, 975
EcoO109I RGGNCCY 1 cut(s) 386
EcoRI GAATTC 1 cut(s) 266
EcoT14I CCWWGG 1 cut(s) 312
EcoT22I ATGCAT 1 cut(s) 628
ErhI CCWWGG 1 cut(s) 312
Esp3I CGTCTC 1 cut(s) 167
FaeI CATG 3 cut(s) 772, 793, 1193
FatI CATG 3 cut(s) 768, 789, 1189
FauI CCCGC 1 cut(s) 417
FblI GTMKAC 2 cut(s) 225, 1338
Fnu4HI GCNGC 8 cut(s) 157, 201, 302, 418, 701, 1010, 1075, 1104
FokI GGATG 3 cut(s) 923, 1304, 1318
Fsp4HI GCNGC 8 cut(s) 157, 201, 302, 418, 701, 1010, 1075, 1104
FspBI CTAG 1 cut(s) 153
GluI GCNGC 8 cut(s) 157, 201, 302, 418, 701, 1010, 1075, 1104
GsaI CCCAGC 1 cut(s) 189
HaeIII GGCC 6 cut(s) 387, 417, 468, 574, 652, 1182
HapII CCGG 7 cut(s) 163, 272, 320, 432, 807, 1013, 1078
HgaI GACGC 1 cut(s) 385
Hin1II CATG 3 cut(s) 772, 793, 1193
HindIII AAGCTT 2 cut(s) 471, 1136
HinfI GANTC 3 cut(s) 234, 1156, 1185
HpaII CCGG 7 cut(s) 163, 272, 320, 432, 807, 1013, 1078
HphI GGTGA 6 cut(s) 99, 391, 525, 617, 986, 1061
Hpy166II GTNNAC 4 cut(s) 226, 711, 1089, 1339
Hpy188I TCNGA 8 cut(s) 358, 511, 870, 881, 903, 994, 1034, 1320
Hpy188III TCNNGA 5 cut(s) 31, 320, 460, 722, 1022
Hpy8I GTNNAC 4 cut(s) 226, 711, 1089, 1339
Hpy99I CGWCG 1 cut(s) 685
HpyCH4III ACNGT 2 cut(s) 254, 862
HpyCH4V TGCA 9 cut(s) 257, 349, 382, 626, 793, 1004, 1106, 1193, 1231
HpyF10VI GCNNNNNNNGC 3 cut(s) 393, 580, 954
HpyF3I CTNAG 4 cut(s) 390, 704, 902, 1345
Hsp92II CATG 3 cut(s) 772, 793, 1193
Kpn2I TCCGGA 1 cut(s) 319
KspI CCGCGG 1 cut(s) 421
Kzo9I GATC 1 cut(s) 718
LmnI GCTCC 1 cut(s) 938
Lsp1109I GCAGC 3 cut(s) 143, 996, 1090
LweI GCATC 4 cut(s) 96, 288, 613, 1311
MaeI CTAG 1 cut(s) 153
MaeIII GTNAC 2 cut(s) 397, 542
MalI GATC 1 cut(s) 720
MbiI CCGCTC 1 cut(s) 28
MboI GATC 1 cut(s) 718
MboII GAAGA 9 cut(s) 44, 57, 82, 335, 562, 746, 857, 1253, 1295
MfeI CAATTG 2 cut(s) 258, 794
MhlI GDGCHC 1 cut(s) 561
MlsI TGGCCA 1 cut(s) 468
MluCI AATT 7 cut(s) 258, 266, 794, 1052, 1081, 1115, 1124
MluNI TGGCCA 1 cut(s) 468
MlyI GAGTC 1 cut(s) 1179
MmeI TCCRAC 1 cut(s) 80
Mox20I TGGCCA 1 cut(s) 468
Mph1103I ATGCAT 1 cut(s) 628
MroI TCCGGA 1 cut(s) 319
MscI TGGCCA 1 cut(s) 468
MseI TTAA 5 cut(s) 78, 246, 372, 1118, 1263
MslI CAYNNNNRTG 2 cut(s) 564, 1098
Msp20I TGGCCA 1 cut(s) 468
MspA1I CMGCKG 1 cut(s) 420
MspI CCGG 7 cut(s) 163, 272, 320, 432, 807, 1013, 1078
MspR9I CCNGG 3 cut(s) 272, 808, 1014
MunI CAATTG 2 cut(s) 258, 794
Mva1269I GAATGC 1 cut(s) 1106
MvnI CGCG 1 cut(s) 420
MwoI GCNNNNNNNGC 3 cut(s) 393, 580, 954
NciI CCSGG 3 cut(s) 272, 808, 1014
NdeII GATC 1 cut(s) 718
NlaIII CATG 3 cut(s) 772, 793, 1193
NlaIV GGNNCC 6 cut(s) 318, 368, 651, 699, 916, 940
NmuCI GTSAC 1 cut(s) 397
NsiI ATGCAT 1 cut(s) 628
OliI CACNNNNGTG 1 cut(s) 564
PceI AGGCCT 1 cut(s) 574
PctI GAATGC 1 cut(s) 1106
PfeI GAWTC 2 cut(s) 234, 1156
PflFI GACNNNGTC 1 cut(s) 1028
PflMI CCANNNNNTGG 3 cut(s) 292, 659, 1195
PfoI TCCNGGA 1 cut(s) 270
PkrI GCNGC 8 cut(s) 158, 202, 303, 419, 702, 1011, 1076, 1105
PleI GAGTC 1 cut(s) 1179
PpsI GAGTC 1 cut(s) 1179
PspFI CCCAGC 1 cut(s) 185
PspN4I GGNNCC 6 cut(s) 318, 368, 651, 699, 916, 940
PspPI GGNCC 4 cut(s) 309, 386, 422, 650
PstI CTGCAG 1 cut(s) 351
PstNI CAGNNNCTG 1 cut(s) 1165
PsyI GACNNNGTC 1 cut(s) 1028
RsaI GTAC 5 cut(s) 39, 195, 773, 962, 1088
RsaNI GTAC 5 cut(s) 38, 194, 772, 961, 1087
RseI CAYNNNNRTG 2 cut(s) 564, 1098
SacII CCGCGG 1 cut(s) 421
SaqAI TTAA 5 cut(s) 78, 246, 372, 1118, 1263
SatI GCNGC 8 cut(s) 157, 201, 302, 418, 701, 1010, 1075, 1104
Sau3AI GATC 1 cut(s) 718
Sau96I GGNCC 4 cut(s) 309, 386, 422, 650
ScaI AGTACT 2 cut(s) 195, 962
SchI GAGTC 1 cut(s) 1179
ScrFI CCNGG 3 cut(s) 272, 808, 1014
SduI GDGCHC 1 cut(s) 561
SfaNI GCATC 4 cut(s) 96, 288, 613, 1311
SfcI CTRYAG 1 cut(s) 347
Sfr303I CCGCGG 1 cut(s) 421
SgrAI CRCCGGYG 1 cut(s) 431
SgrBI CCGCGG 1 cut(s) 421
SinI GGWCC 2 cut(s) 309, 422
SmiMI CAYNNNNRTG 2 cut(s) 564, 1098
SmlI CTYRAG 1 cut(s) 1133
SmoI CTYRAG 1 cut(s) 1133
Sse9I AATT 7 cut(s) 258, 266, 794, 1052, 1081, 1115, 1124
SseBI AGGCCT 1 cut(s) 574
SsiI CCGC 9 cut(s) 26, 200, 231, 302, 410, 418, 420, 701, 1075
SspI AATATT 2 cut(s) 745, 1236
SspMI CTAG 1 cut(s) 153
StuI AGGCCT 1 cut(s) 574
StyD4I CCNGG 3 cut(s) 270, 806, 1012
StyI CCWWGG 1 cut(s) 312
TaaI ACNGT 2 cut(s) 254, 862
TaqI TCGA 1 cut(s) 237
TasI AATT 7 cut(s) 258, 266, 794, 1052, 1081, 1115, 1124
TatI WGTACW 3 cut(s) 193, 960, 1086
TauI GCSGC 5 cut(s) 203, 304, 420, 703, 1077
TfiI GAWTC 2 cut(s) 234, 1156
Tru1I TTAA 5 cut(s) 78, 246, 372, 1118, 1263
Tru9I TTAA 5 cut(s) 78, 246, 372, 1118, 1263
TscAI CASTG 5 cut(s) 259, 823, 1011, 1076, 1200
TseFI GTSAC 1 cut(s) 397
TseI GCWGC 3 cut(s) 156, 1009, 1103
Tsp45I GTSAC 1 cut(s) 397
TspDTI ATGAA 4 cut(s) 194, 747, 778, 1318
TspGWI ACGGA 2 cut(s) 698, 1168
TspRI CASTG 5 cut(s) 259, 823, 1011, 1076, 1200
Tth111I GACNNNGTC 1 cut(s) 1028
Van91I CCANNNNNTGG 3 cut(s) 292, 659, 1195
VpaK11BI GGWCC 2 cut(s) 309, 422
XapI RAATTY 4 cut(s) 266, 1052, 1081, 1124
XcmI CCANNNNNNNNNTGG 1 cut(s) 193
XmiI GTMKAC 2 cut(s) 225, 1338
XspI CTAG 1 cut(s) 153
ZrmI AGTACT 2 cut(s) 195, 962
Zsp2I ATGCAT 1 cut(s) 628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.